AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180003382.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180003382.01.T01 MTR_1g060700 92.790 319 19 3 109 426 172 487 0.0 603
MsG0180003382.01.T01 MTR_2g067000 80.435 322 29 10 115 426 1 298 2.61e-160 454
MsG0180003382.01.T01 MTR_1g060720 81.928 83 14 1 29 111 75 156 5.51e-29 114
MsG0180003382.01.T01 MTR_8g093500 58.491 53 22 0 296 348 125 177 1.81e-13 70.9
MsG0180003382.01.T01 MTR_3g101810 58.491 53 22 0 296 348 182 234 8.14e-13 68.9
MsG0180003382.01.T01 MTR_7g069590 43.103 58 33 0 296 353 37 94 1.08e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180003382.01.T01 AT1G30670 40.936 171 98 2 249 419 95 262 6.15e-27 108
MsG0180003382.01.T01 AT2G34820 41.784 213 116 4 211 419 81 289 3.13e-26 107
MsG0180003382.01.T01 AT1G16445 60.000 70 26 1 35 102 86 155 2.40e-19 87.8
MsG0180003382.01.T01 AT3G21330 62.264 53 20 0 296 348 280 332 9.57e-14 72.8
MsG0180003382.01.T01 AT5G01305 50.000 58 29 0 296 353 48 105 5.16e-13 67.4
MsG0180003382.01.T01 AT4G00120 52.830 53 25 0 296 348 123 175 3.33e-12 65.9

Find 73 sgRNAs with CRISPR-Local

Find 645 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTGAAGGCGAAATTTAATT+TGG 0.163078 1:-61467936 MsG0180003382.01.T01:CDS
AGTTGGAATGCTTCAACTTA+TGG 0.195386 1:-61458432 MsG0180003382.01.T01:CDS
CAATGACTGTATCTCCTTTC+TGG 0.196980 1:+61466335 None:intergenic
CACCTTAGCATTGCGCAATT+TGG 0.227250 1:-61466287 MsG0180003382.01.T01:CDS
ATCTCTGCTGTGTTCATCTT+TGG 0.238213 1:+61458497 None:intergenic
AGATAAGACTTCACTGTTAC+TGG 0.271461 1:-61466206 MsG0180003382.01.T01:CDS
TTGGTGAAATCTTCCTCATT+TGG 0.290806 1:+61458818 None:intergenic
ATCAAAACCTACCATTCTTA+AGG 0.300143 1:-61457376 MsG0180003382.01.T01:CDS
GAGAAAAGAAGCCATGAAAA+TGG 0.304315 1:-61467879 MsG0180003382.01.T01:CDS
CTGAAGGCGAAATTTAATTT+GGG 0.314584 1:-61467935 MsG0180003382.01.T01:CDS
AAATAAAACTATTCTTGCTT+TGG 0.325467 1:+61457315 None:intergenic
TGGTGAAATCTTCCTCATTT+GGG 0.332786 1:+61458819 None:intergenic
AGTTTCATTCAAATAGTTAG+AGG 0.343349 1:+61458985 None:intergenic
GAAGCAAAAGGGTTAGGGTT+AGG 0.345524 1:+61458683 None:intergenic
AAGCAAAAGGGTTAGGGTTA+GGG 0.345934 1:+61458684 None:intergenic
CACAGTTTCTCTTGAACAAA+TGG 0.354543 1:+61457465 None:intergenic
TCTCCTCGTAGCATAGCTTT+TGG 0.368098 1:+61458774 None:intergenic
AGTTGATCTTGACAAGGGTT+AGG 0.369040 1:+61458902 None:intergenic
TCAAAGGAAGCAAAAGGGTT+AGG 0.369513 1:+61458677 None:intergenic
GTAGTTTGAATAGGTTGATA+AGG 0.378786 1:+61459079 None:intergenic
AAGGGTCTGAAACAGCTTGC+TGG 0.388228 1:-61457357 MsG0180003382.01.T01:CDS
AGTAGTGATTTCTGAGTTGT+TGG 0.388792 1:+61459057 None:intergenic
AATGTGGTGACAAACTCTTT+TGG 0.390869 1:+61457420 None:intergenic
GTGCTTGGGAAGTTGGTTCC+TGG 0.397371 1:-61458524 MsG0180003382.01.T01:CDS
GACACAAGTGCTTGGGAAGT+TGG 0.424372 1:-61458531 MsG0180003382.01.T01:CDS
GAGTTGTTGGTAGTTTGAAT+AGG 0.425759 1:+61459070 None:intergenic
TAGTTTGAATAGGTTGATAA+GGG 0.429054 1:+61459080 None:intergenic
CTCAGTAGTCCTCACCTCAT+TGG 0.433397 1:+61466168 None:intergenic
GTTGATCTTGACAAGGGTTA+GGG 0.453473 1:+61458903 None:intergenic
TCAAAACCTACCATTCTTAA+GGG 0.456430 1:-61457375 MsG0180003382.01.T01:CDS
CAAAGGAAGCAAAAGGGTTA+GGG 0.461232 1:+61458678 None:intergenic
GTTGCTGATGAGTCACATAA+TGG 0.464226 1:-61466265 MsG0180003382.01.T01:CDS
TTGTGTAGATCTTCACTTGG+AGG 0.465635 1:+61457501 None:intergenic
AGAGTATCGCGGCGAGAGAA+AGG 0.466876 1:-61458574 MsG0180003382.01.T01:CDS
TCTACCTCAAAGGAAGCAAA+AGG 0.468900 1:+61458671 None:intergenic
GGCTGGTGATATTGTGCTAA+TGG 0.485023 1:-61467852 MsG0180003382.01.T01:CDS
GTTCAATGTGAGAAGAAAGT+TGG 0.488552 1:-61458617 MsG0180003382.01.T01:CDS
TGTAGATCTTCACTTGGAGG+AGG 0.494574 1:+61457504 None:intergenic
GTGTTCATCTTTGGTCCACC+AGG 0.499817 1:+61458506 None:intergenic
ACTGAGAAGACACAAGTGCT+TGG 0.510386 1:-61458539 MsG0180003382.01.T01:CDS
CTGAGAAGACACAAGTGCTT+GGG 0.515747 1:-61458538 MsG0180003382.01.T01:CDS
AACCAAATTGCGCAATGCTA+AGG 0.516356 1:+61466285 None:intergenic
CTGTTTCAGACCCTTAAGAA+TGG 0.516519 1:+61457365 None:intergenic
AGGGTCTGAAACAGCTTGCT+GGG 0.522554 1:-61457356 MsG0180003382.01.T01:CDS
TGAAACAGTGTCGTGTGAGA+AGG 0.530345 1:-61467907 MsG0180003382.01.T01:CDS
TGGAAACATGTTGTCCAGAA+AGG 0.540821 1:-61466349 MsG0180003382.01.T01:CDS
TGAAGGCGAAATTTAATTTG+GGG 0.543371 1:-61467934 MsG0180003382.01.T01:CDS
GTGAGAAGAAAGTTGGTGAA+AGG 0.566992 1:-61458610 MsG0180003382.01.T01:CDS
AAGTTTCTTCAAGCTCAAGT+TGG 0.567049 1:-61458449 MsG0180003382.01.T01:CDS
AGCAAAGGGTTCTACCTCAA+AGG 0.572532 1:+61458661 None:intergenic
AGAAGCCATGAAAATGGAAG+AGG 0.572942 1:-61467873 MsG0180003382.01.T01:CDS
GAAGGCGAAATTTAATTTGG+GGG 0.576602 1:-61467933 MsG0180003382.01.T01:CDS
TAATGGTTATGTGTACGCAT+TGG 0.580443 1:-61466248 MsG0180003382.01.T01:CDS
AGTTTGTGTAGATCTTCACT+TGG 0.582386 1:+61457498 None:intergenic
ATTGATGCGACATGTGGCAA+CGG 0.582874 1:-61466316 MsG0180003382.01.T01:CDS
TTCAGACCCTTAAGAATGGT+AGG 0.583734 1:+61457369 None:intergenic
GAGTTCAAAAGCTCTTGTTG+TGG 0.586358 1:+61458740 None:intergenic
TCGCGGCGAGAGAAAGGAGA+AGG 0.587504 1:-61458568 MsG0180003382.01.T01:CDS
ACTTATGGAAACATTTAACA+AGG 0.595324 1:-61458417 MsG0180003382.01.T01:intron
CTTGGGAAGTTGGTTCCTGG+TGG 0.597463 1:-61458521 MsG0180003382.01.T01:CDS
CTACCTCAAAGGAAGCAAAA+GGG 0.620756 1:+61458672 None:intergenic
TAAGGATGAAATGAGTCTGA+AGG 0.623455 1:-61467951 None:intergenic
CACTTAGTTCCAATGAGGTG+AGG 0.627635 1:-61466177 MsG0180003382.01.T01:CDS
ACAAGTAGTTGATCTTGACA+AGG 0.633389 1:+61458896 None:intergenic
GCCATGAAAATGGAAGAGGC+TGG 0.637392 1:-61467869 MsG0180003382.01.T01:CDS
ACAGTCATTGATGCGACATG+TGG 0.653812 1:-61466322 MsG0180003382.01.T01:CDS
CAAGTAGTTGATCTTGACAA+GGG 0.656926 1:+61458897 None:intergenic
ATTATTATGATTGCTCAATG+TGG 0.674695 1:+61457404 None:intergenic
AGAATCACTTAGTTCCAATG+AGG 0.678288 1:-61466182 MsG0180003382.01.T01:CDS
ATGCTACGAGGAGAAAAGAG+AGG 0.681365 1:-61458765 MsG0180003382.01.T01:CDS
TATCTCGTCGCAGAGTATCG+CGG 0.686396 1:-61458585 MsG0180003382.01.T01:CDS
ACGCCAAAAGCTATGCTACG+AGG 0.715032 1:-61458777 MsG0180003382.01.T01:CDS
CAATGAGGTGAGGACTACTG+AGG 0.716940 1:-61466167 MsG0180003382.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATATTATATTATTAATTA+AGG - Chr1:61461860-61461879 MsG0180003382.01.T01:intron 0.0%
!!! TATATTAATAATTTTTTTAT+TGG - Chr1:61464479-61464498 MsG0180003382.01.T01:intron 0.0%
!! CATTTAAATTTAAAAACAAA+CGG - Chr1:61457742-61457761 MsG0180003382.01.T01:intron 10.0%
!! TAAAAATGAAAGATTTAATA+AGG - Chr1:61457681-61457700 MsG0180003382.01.T01:intron 10.0%
!!! AATATAACTTATTATTTTTG+GGG - Chr1:61465408-61465427 MsG0180003382.01.T01:intron 10.0%
!!! ATTTAAAATCAATTAACAAT+AGG + Chr1:61462576-61462595 None:intergenic 10.0%
!!! TAGAATTGATTTTTTTTTTT+TGG + Chr1:61457882-61457901 None:intergenic 10.0%
!!! TTATTTTCTTTATGTATTAT+TGG - Chr1:61460599-61460618 MsG0180003382.01.T01:intron 10.0%
!!! TTTTCTTTCTTTTTTTTTTT+GGG - Chr1:61460894-61460913 MsG0180003382.01.T01:intron 10.0%
!!! TTTTTAAATTTAAATGTCTT+AGG + Chr1:61457738-61457757 None:intergenic 10.0%
!!! TTTTTCTTTCTTTTTTTTTT+TGG - Chr1:61460893-61460912 MsG0180003382.01.T01:intron 10.0%
!! AAAACATATTTATAAAGTGA+GGG + Chr1:61459421-61459440 None:intergenic 15.0%
!! AAGAGAAAAAAAACATAAAT+AGG + Chr1:61466103-61466122 None:intergenic 15.0%
!! AATTAATTATATAATAGCTC+AGG + Chr1:61460530-61460549 None:intergenic 15.0%
!! AGAGAAAAAAAACATAAATA+GGG + Chr1:61466102-61466121 None:intergenic 15.0%
!! TAAAACATATTTATAAAGTG+AGG + Chr1:61459422-61459441 None:intergenic 15.0%
!! TAGTAAAATTTAAAAGAGTT+TGG + Chr1:61460221-61460240 None:intergenic 15.0%
!! TATGATATATGTGTTTAATT+AGG + Chr1:61461552-61461571 None:intergenic 15.0%
!! TATTGTTGTAAATATCTAAA+TGG - Chr1:61467223-61467242 MsG0180003382.01.T01:intron 15.0%
!!! AGATTTAAAAGCATTATTAT+TGG + Chr1:61462653-61462672 None:intergenic 15.0%
!!! ATAATTTTTTCACAACATTT+TGG - Chr1:61463889-61463908 MsG0180003382.01.T01:intron 15.0%
!!! ATCTAATAGCTTTTAATATT+TGG - Chr1:61463075-61463094 MsG0180003382.01.T01:intron 15.0%
!!! ATTGTTATTGAGTATAATAA+GGG - Chr1:61461089-61461108 MsG0180003382.01.T01:intron 15.0%
!!! CAAATTTTTTAAATCCTTTA+CGG - Chr1:61465347-61465366 MsG0180003382.01.T01:intron 15.0%
!!! GATTTTAAATAACTCATTTT+TGG - Chr1:61462586-61462605 MsG0180003382.01.T01:intron 15.0%
!!! TAAAGAAAATAATTTTACCA+TGG + Chr1:61460591-61460610 None:intergenic 15.0%
!!! TATTGTTATTGAGTATAATA+AGG - Chr1:61461088-61461107 MsG0180003382.01.T01:intron 15.0%
!!! TTTCTTTCTTTTTTTTTTTG+GGG - Chr1:61460895-61460914 MsG0180003382.01.T01:intron 15.0%
!! AAACATATTTATAAAGTGAG+GGG + Chr1:61459420-61459439 None:intergenic 20.0%
!! AAACCCATTAAACAAAATAA+TGG - Chr1:61458040-61458059 MsG0180003382.01.T01:intron 20.0%
!! AAATGGAATAAATCAAATGT+TGG + Chr1:61460110-61460129 None:intergenic 20.0%
!! AATATGGAAATCAGTTTATA+AGG - Chr1:61465463-61465482 MsG0180003382.01.T01:intron 20.0%
!! AATCAAAACATTATTGCTTA+AGG + Chr1:61461123-61461142 None:intergenic 20.0%
!! ACATGTTGAACAATTAAAAT+AGG + Chr1:61465282-61465301 None:intergenic 20.0%
!! ACGAATAAAATGAAAGTAAA+AGG - Chr1:61460414-61460433 MsG0180003382.01.T01:intron 20.0%
!! AGGTTGAAAGTTAAATATTT+GGG + Chr1:61461216-61461235 None:intergenic 20.0%
!! ATAGATATAGAGATTTAGAA+TGG - Chr1:61463101-61463120 MsG0180003382.01.T01:intron 20.0%
!! ATATGGAAATCAGTTTATAA+GGG - Chr1:61465464-61465483 MsG0180003382.01.T01:intron 20.0%
!! ATGATACTAGTATCTTAAAA+TGG - Chr1:61462542-61462561 MsG0180003382.01.T01:intron 20.0%
!! CATAATAACACTACAATAAA+TGG + Chr1:61467198-61467217 None:intergenic 20.0%
!! CGTTTGATAAAAAAATATAG+AGG - Chr1:61467167-61467186 MsG0180003382.01.T01:intron 20.0%
!! CTGAAAATATCAATATACAA+CGG + Chr1:61459540-61459559 None:intergenic 20.0%
!! CTTACTAGTATTGTTAAATA+AGG + Chr1:61462859-61462878 None:intergenic 20.0%
!! GAAAGATTTAATAAGGTTTA+TGG - Chr1:61457688-61457707 MsG0180003382.01.T01:intron 20.0%
!! GGAATTGTTATAAAAATTGA+CGG - Chr1:61467379-61467398 MsG0180003382.01.T01:intron 20.0%
!! TAACTAATAATTTACAACCT+TGG - Chr1:61463484-61463503 MsG0180003382.01.T01:intron 20.0%
!! TAATATTTAATGTCGTGATT+TGG + Chr1:61463719-61463738 None:intergenic 20.0%
!! TGAAGGTTATTATTATTACT+GGG + Chr1:61458079-61458098 None:intergenic 20.0%
!! TGTTTGAAAGTAGAAAATAT+AGG + Chr1:61466024-61466043 None:intergenic 20.0%
!! TTAACAGAATGATCATTAAA+AGG + Chr1:61459708-61459727 None:intergenic 20.0%
!! TTGAACAATTAAAATAGGAA+AGG + Chr1:61465277-61465296 None:intergenic 20.0%
!! TTGAAGGTTATTATTATTAC+TGG + Chr1:61458080-61458099 None:intergenic 20.0%
!! TTGATTATTTCAGGAAAAAA+AGG - Chr1:61467735-61467754 MsG0180003382.01.T01:intron 20.0%
!! TTTACTCCATGAAAATATTT+AGG - Chr1:61467358-61467377 MsG0180003382.01.T01:intron 20.0%
!! TTTAGGTAAAATTACTTATG+TGG - Chr1:61463832-61463851 MsG0180003382.01.T01:intron 20.0%
!!! AACATTTGATTTATTCCATT+TGG - Chr1:61460109-61460128 MsG0180003382.01.T01:intron 20.0%
!!! AAGCCATTATTTTGTTTAAT+GGG + Chr1:61458046-61458065 None:intergenic 20.0%
!!! AATAGAGATGAGTTTTATTT+GGG - Chr1:61457538-61457557 MsG0180003382.01.T01:intron 20.0%
!!! ACAATTCCTAAATATTTTCA+TGG + Chr1:61467367-61467386 None:intergenic 20.0%
!!! AGTACAGTTTTTTTTTTTTG+AGG + Chr1:61465794-61465813 None:intergenic 20.0%
!!! ATTATTCATCTTTTCTTCAA+TGG + Chr1:61460352-61460371 None:intergenic 20.0%
!!! ATTCTGTATTTTTGTTAACA+TGG - Chr1:61466127-61466146 MsG0180003382.01.T01:intron 20.0%
!!! ATTCTTGTCAAATTTGTTTA+AGG - Chr1:61462883-61462902 MsG0180003382.01.T01:intron 20.0%
!!! ATTGTTTTGTTTCATTAGTT+TGG - Chr1:61461437-61461456 MsG0180003382.01.T01:intron 20.0%
!!! GAAGCTTTTTTTTTTTTTGA+AGG + Chr1:61463958-61463977 None:intergenic 20.0%
!!! GTTTTATTTATAGTCCTTTT+TGG + Chr1:61464247-61464266 None:intergenic 20.0%
!!! TAGGTTGAAAGTTAAATATT+TGG + Chr1:61461217-61461236 None:intergenic 20.0%
!!! TCATTGATTCTATAATAGTT+TGG - Chr1:61458744-61458763 MsG0180003382.01.T01:CDS 20.0%
!!! TCATTTTGACTGTAAAAAAA+AGG - Chr1:61462017-61462036 MsG0180003382.01.T01:intron 20.0%
!!! TGTTGCTTTTGATTTTTTAA+TGG - Chr1:61461465-61461484 MsG0180003382.01.T01:intron 20.0%
!!! TGTTTGATCTTTGTTTTAAA+TGG + Chr1:61457659-61457678 None:intergenic 20.0%
!!! TTACAATTATTAGCTTTTGT+AGG + Chr1:61465170-61465189 None:intergenic 20.0%
!!! TTCTGTATTTTTGTTAACAT+GGG - Chr1:61466128-61466147 MsG0180003382.01.T01:intron 20.0%
!!! TTGTTATTGAGTATAATAAG+GGG - Chr1:61461090-61461109 MsG0180003382.01.T01:intron 20.0%
!!! TTTAAAAAATCTGAAACAGT+CGG - Chr1:61463270-61463289 MsG0180003382.01.T01:intron 20.0%
!!! TTTTGCTAATTGATTATTTC+AGG - Chr1:61467726-61467745 MsG0180003382.01.T01:intron 20.0%
!!! TTTTTGGTAAATACATACTT+TGG + Chr1:61457866-61457885 None:intergenic 20.0%
! AAAACATTATTGCTTAAGGA+GGG + Chr1:61461119-61461138 None:intergenic 25.0%
! AAACTCATCCACAAAAAAAT+TGG + Chr1:61466552-61466571 None:intergenic 25.0%
! AAAGACAAAATTGAGACAAT+AGG + Chr1:61467311-61467330 None:intergenic 25.0%
! AAAGACTATAAGGATGTAAA+TGG + Chr1:61458150-61458169 None:intergenic 25.0%
! AACTTCAAACATAGAAAATC+AGG + Chr1:61460979-61460998 None:intergenic 25.0%
! AAGACTATAAGGATGTAAAT+GGG + Chr1:61458149-61458168 None:intergenic 25.0%
! AAGCATTTCTTGAAACTTTA+AGG - Chr1:61460651-61460670 MsG0180003382.01.T01:intron 25.0%
! AATAAGAAAGAGAAATGCAT+AGG - Chr1:61465633-61465652 MsG0180003382.01.T01:intron 25.0%
! AATATGTGTAAATAGTCACA+TGG - Chr1:61460039-61460058 MsG0180003382.01.T01:intron 25.0%
! AATCCTGAAAACATGAAAAA+AGG + Chr1:61458212-61458231 None:intergenic 25.0%
! ACATATTTCATATACCGTAA+AGG + Chr1:61465364-61465383 None:intergenic 25.0%
! ACTTATGGAAACATTTAACA+AGG - Chr1:61466847-61466866 MsG0180003382.01.T01:intron 25.0%
! AGAAAAACATCAAATTCACT+TGG + Chr1:61466999-61467018 None:intergenic 25.0%
! AGATTTAATAAGGTTTATGG+TGG - Chr1:61457691-61457710 MsG0180003382.01.T01:intron 25.0%
! AGGAAAAAATTAAGTGTTTG+TGG - Chr1:61457590-61457609 MsG0180003382.01.T01:intron 25.0%
! AGTATTGTTAAATAAGGACA+AGG + Chr1:61462853-61462872 None:intergenic 25.0%
! AGTTTCATTCAAATAGTTAG+AGG + Chr1:61466282-61466301 None:intergenic 25.0%
! ATAAATATGACACATGTGTA+AGG - Chr1:61462447-61462466 MsG0180003382.01.T01:intron 25.0%
! ATACTAGTATCTTAAAATGG+AGG - Chr1:61462545-61462564 MsG0180003382.01.T01:intron 25.0%
! ATATGTGTAAATAGTCACAT+GGG - Chr1:61460040-61460059 MsG0180003382.01.T01:intron 25.0%
! ATCCTGAAAACATGAAAAAA+GGG + Chr1:61458211-61458230 None:intergenic 25.0%
! ATTATTATGATTGCTCAATG+TGG + Chr1:61467863-61467882 None:intergenic 25.0%
! ATTGCAAGTACAAAAGTTAA+AGG - Chr1:61464353-61464372 MsG0180003382.01.T01:intron 25.0%
! ATTGGATACTAATGTTTAGA+TGG - Chr1:61464497-61464516 MsG0180003382.01.T01:intron 25.0%
! CAATATTTGCCATAGTAAAA+TGG - Chr1:61459777-61459796 MsG0180003382.01.T01:intron 25.0%
! CTTACATGTGATCAAAATTT+AGG - Chr1:61463815-61463834 MsG0180003382.01.T01:intron 25.0%
! GAAACGCAAAAATAAGTTAA+GGG - Chr1:61457839-61457858 MsG0180003382.01.T01:intron 25.0%
! GCTGAAAATGTATACATAAA+AGG + Chr1:61458723-61458742 None:intergenic 25.0%
! GGTTGAAAGTTAAATATTTG+GGG + Chr1:61461215-61461234 None:intergenic 25.0%
! GTATATGACTTATCTTTACT+CGG + Chr1:61464166-61464185 None:intergenic 25.0%
! GTTTCATTTGAGTAAAAACA+AGG + Chr1:61466338-61466357 None:intergenic 25.0%
! TACACATATTCAATTACACT+TGG + Chr1:61460029-61460048 None:intergenic 25.0%
! TATCTTCGGAATAAGAAAAT+TGG + Chr1:61462782-61462801 None:intergenic 25.0%
! TCAAATAAGTCAATCCAAAT+TGG - Chr1:61462290-61462309 MsG0180003382.01.T01:intron 25.0%
! TCAAATAGTTAGAGGAAAAA+TGG + Chr1:61466274-61466293 None:intergenic 25.0%
! TGAAAAAAAGATGATGTTGA+AGG - Chr1:61457444-61457463 MsG0180003382.01.T01:CDS 25.0%
! TGAAACGCAAAAATAAGTTA+AGG - Chr1:61457838-61457857 MsG0180003382.01.T01:intron 25.0%
! TGAATATAGAAATGACTTGA+TGG - Chr1:61464670-61464689 MsG0180003382.01.T01:intron 25.0%
! TGATGAATCAACTTGATATT+GGG + Chr1:61463743-61463762 None:intergenic 25.0%
! TGTATCATAGGTCATAATTT+GGG + Chr1:61464283-61464302 None:intergenic 25.0%
! TGTTAGGTTTAAGAAAATGT+TGG - Chr1:61467409-61467428 MsG0180003382.01.T01:intron 25.0%
! TTAAAACCCTCATTTGAATA+AGG - Chr1:61458358-61458377 MsG0180003382.01.T01:intron 25.0%
! TTATAGTATCCATTGCAAAA+TGG - Chr1:61462325-61462344 MsG0180003382.01.T01:intron 25.0%
! TTATATAATAGCTCAGGTTA+TGG + Chr1:61460524-61460543 None:intergenic 25.0%
! TTGATGAATCAACTTGATAT+TGG + Chr1:61463744-61463763 None:intergenic 25.0%
! TTGTATCATAGGTCATAATT+TGG + Chr1:61464284-61464303 None:intergenic 25.0%
! TTGTTATAAAAATTGACGGA+TGG - Chr1:61467383-61467402 MsG0180003382.01.T01:intron 25.0%
! TTGTTTGTTCATTGCATATT+TGG - Chr1:61467099-61467118 MsG0180003382.01.T01:intron 25.0%
! TTTATGATGCAAAGACTATA+AGG + Chr1:61458160-61458179 None:intergenic 25.0%
!! AAACTGATTTCCATATTTCT+AGG + Chr1:61465460-61465479 None:intergenic 25.0%
!! AATATATTTAGTCCCTGTTT+TGG - Chr1:61461519-61461538 MsG0180003382.01.T01:intron 25.0%
!! ATGTTAAACATTTTCCTTCA+AGG + Chr1:61463435-61463454 None:intergenic 25.0%
!! ATTGAGACAGTTTAAAGTTA+AGG - Chr1:61457807-61457826 MsG0180003382.01.T01:intron 25.0%
!! TAGTAAAAAGTGCAAATAGA+CGG + Chr1:61464535-61464554 None:intergenic 25.0%
!! TATTTTCATGGAGTAAAAGT+TGG + Chr1:61467355-61467374 None:intergenic 25.0%
!! TTAAAAAATCTGAAACAGTC+GGG - Chr1:61463271-61463290 MsG0180003382.01.T01:intron 25.0%
!! TTAAACTGTTTTGTGTACTT+AGG - Chr1:61466959-61466978 MsG0180003382.01.T01:intron 25.0%
!! TTAAGCTCTGTTTTGTATAT+AGG - Chr1:61461001-61461020 MsG0180003382.01.T01:intron 25.0%
!! TTGAGACAGTTTAAAGTTAA+GGG - Chr1:61457808-61457827 MsG0180003382.01.T01:intron 25.0%
!!! ACTTTTTCTTCTCAAAATGA+TGG - Chr1:61466398-61466417 MsG0180003382.01.T01:intron 25.0%
!!! ATAGAGATGAGTTTTATTTG+GGG - Chr1:61457539-61457558 MsG0180003382.01.T01:intron 25.0%
!!! ATCATTTTGAGAAGAAAAAG+TGG + Chr1:61466399-61466418 None:intergenic 25.0%
!!! CTTATTTTTGCGTTTCATTT+TGG + Chr1:61457835-61457854 None:intergenic 25.0%
!!! GAAGCCATTATTTTGTTTAA+TGG + Chr1:61458047-61458066 None:intergenic 25.0%
!!! GAATAGAGATGAGTTTTATT+TGG - Chr1:61457537-61457556 MsG0180003382.01.T01:intron 25.0%
!!! GTAGGTTTTTTTTGTATCAT+AGG + Chr1:61464295-61464314 None:intergenic 25.0%
!!! TAACTTAATTTTTGTCGACT+TGG - Chr1:61463860-61463879 MsG0180003382.01.T01:intron 25.0%
!!! TAATGTATTGTTGTTGCTTT+TGG - Chr1:61460312-61460331 MsG0180003382.01.T01:intron 25.0%
!!! TAGTTTGAATAGGTTGATAA+GGG + Chr1:61466187-61466206 None:intergenic 25.0%
!!! TTTCATTTGTTTTTGTGAGT+AGG - Chr1:61458398-61458417 MsG0180003382.01.T01:intron 25.0%
AAAAAAGATGATGTTGAAGG+AGG - Chr1:61457447-61457466 MsG0180003382.01.T01:CDS 30.0%
AAAAAGATGATGTTGAAGGA+GGG - Chr1:61457448-61457467 MsG0180003382.01.T01:CDS 30.0%
AAGAAGAAGAAGAAGATTGA+AGG + Chr1:61458096-61458115 None:intergenic 30.0%
AAGATCAGAAACAACATTAC+TGG - Chr1:61460771-61460790 MsG0180003382.01.T01:intron 30.0%
AATAGTTAGAGGAAAAATGG+TGG + Chr1:61466271-61466290 None:intergenic 30.0%
AATATGCTGCATATACATGT+AGG - Chr1:61460695-61460714 MsG0180003382.01.T01:intron 30.0%
AATATGTCAAGTCTTGGATT+TGG - Chr1:61462406-61462425 MsG0180003382.01.T01:intron 30.0%
AATGTAGAGAGAATAAAGAG+AGG + Chr1:61462924-61462943 None:intergenic 30.0%
AATTAGAGATCTAGAGATCT+AGG + Chr1:61461982-61462001 None:intergenic 30.0%
ACAGTCAAAATGAAGAAGAA+AGG + Chr1:61462010-61462029 None:intergenic 30.0%
ACATAGAAAATCAGGATGTT+TGG + Chr1:61460971-61460990 None:intergenic 30.0%
ACTCAAATGATTACAAGCAA+GGG + Chr1:61467141-61467160 None:intergenic 30.0%
ACTTGAATGAAATATCTGGT+GGG + Chr1:61465236-61465255 None:intergenic 30.0%
AGATACTAGTATCATTGCAT+TGG + Chr1:61462537-61462556 None:intergenic 30.0%
AGCAAAACCTTATTCAAATG+AGG + Chr1:61458368-61458387 None:intergenic 30.0%
AGTGTGTAACAGACTAAAAA+GGG + Chr1:61461413-61461432 None:intergenic 30.0%
ATCAAAACCTACCATTCTTA+AGG - Chr1:61467888-61467907 MsG0180003382.01.T01:CDS 30.0%
ATTAGCATAGTGGTTTATGT+CGG - Chr1:61460835-61460854 MsG0180003382.01.T01:intron 30.0%
ATTGAAGGGAAAAAAAGACT+AGG + Chr1:61465859-61465878 None:intergenic 30.0%
ATTTAAAAGAGTTTGGTCCA+TGG + Chr1:61460214-61460233 None:intergenic 30.0%
CAAAACATTATTGCTTAAGG+AGG + Chr1:61461120-61461139 None:intergenic 30.0%
CAATCAAGAAATCATATAGC+AGG + Chr1:61462814-61462833 None:intergenic 30.0%
CAGTCAAAATGAAGAAGAAA+GGG + Chr1:61462009-61462028 None:intergenic 30.0%
CAGTTTGATCATTTATTAGC+AGG + Chr1:61459621-61459640 None:intergenic 30.0%
CCATATCCTGAATTATATGA+CGG + Chr1:61464043-61464062 None:intergenic 30.0%
CGATAAAAACTGTATAGCTA+AGG + Chr1:61460247-61460266 None:intergenic 30.0%
CGGAATAAGAAAATTGGTAT+CGG + Chr1:61462776-61462795 None:intergenic 30.0%
CTAATCAGTTCCTATAGTAA+GGG + Chr1:61464191-61464210 None:intergenic 30.0%
CTATAGGAACTGATTAGATA+AGG - Chr1:61464194-61464213 MsG0180003382.01.T01:intron 30.0%
CTCTTTGCTTTATCTTTAGA+GGG - Chr1:61458695-61458714 MsG0180003382.01.T01:CDS 30.0%
CTTAGGTGAATCAACTTTAT+TGG + Chr1:61457721-61457740 None:intergenic 30.0%
GAAAAGACCAAAATGGTAAA+CGG - Chr1:61457764-61457783 MsG0180003382.01.T01:intron 30.0%
GAAAATTTAGGAGAAGTTTG+AGG + Chr1:61465672-61465691 None:intergenic 30.0%
GATATATGTGAATCTTTGCT+AGG + Chr1:61465902-61465921 None:intergenic 30.0%
GATGAATCAACTTGATATTG+GGG + Chr1:61463742-61463761 None:intergenic 30.0%
GCAAAACCTTATTCAAATGA+GGG + Chr1:61458367-61458386 None:intergenic 30.0%
GGCTAGTAAATACAATAGAT+TGG - Chr1:61461486-61461505 MsG0180003382.01.T01:intron 30.0%
GTAAACGGAAGAAGATTTAT+GGG - Chr1:61457779-61457798 MsG0180003382.01.T01:intron 30.0%
GTGAAACAAAATTGGAATTG+AGG + Chr1:61459992-61460011 None:intergenic 30.0%
TAATCAGTTCCTATAGTAAG+GGG + Chr1:61464190-61464209 None:intergenic 30.0%
TAATGCTGTTGTTGTAGATT+TGG - Chr1:61467250-61467269 MsG0180003382.01.T01:intron 30.0%
TACTCAAATGATTACAAGCA+AGG + Chr1:61467142-61467161 None:intergenic 30.0%
TACTTTACTTGATGCATCTT+AGG - Chr1:61458299-61458318 MsG0180003382.01.T01:intron 30.0%
TATTTGCCATAGTAAAATGG+AGG - Chr1:61459780-61459799 MsG0180003382.01.T01:intron 30.0%
TCAAAACCTACCATTCTTAA+GGG - Chr1:61467889-61467908 MsG0180003382.01.T01:CDS 30.0%
TCTAATCAGTTCCTATAGTA+AGG + Chr1:61464192-61464211 None:intergenic 30.0%
TCTCTTTGCTTTATCTTTAG+AGG - Chr1:61458694-61458713 MsG0180003382.01.T01:CDS 30.0%
TCTGAAGGCGAAATTTAATT+TGG - Chr1:61457328-61457347 MsG0180003382.01.T01:CDS 30.0%
TGAAGGTTTCAACTTTCAAT+TGG - Chr1:61459122-61459141 MsG0180003382.01.T01:CDS 30.0%
TTCTTCGTAAAATGTTACTG+TGG + Chr1:61464380-61464399 None:intergenic 30.0%
TTGAAGGGAAAAAAAGACTA+GGG + Chr1:61465858-61465877 None:intergenic 30.0%
TTGATCATTTATTAGCAGGA+TGG + Chr1:61459617-61459636 None:intergenic 30.0%
TTTAATCAGGACTTATGCTT+GGG - Chr1:61464007-61464026 MsG0180003382.01.T01:intron 30.0%
TTTATAGCCTCCAAAGAATA+AGG + Chr1:61464626-61464645 None:intergenic 30.0%
TTTGTGGGTTCAGAAAATTT+AGG + Chr1:61465684-61465703 None:intergenic 30.0%
! AATGCTTTTAAATCTGTCCA+GGG - Chr1:61462658-61462677 MsG0180003382.01.T01:intron 30.0%
! ACAAGCATCTAAGTGATTTT+TGG - Chr1:61464808-61464827 MsG0180003382.01.T01:intron 30.0%
! AGAAATATTTTCATGTGACG+AGG - Chr1:61463532-61463551 MsG0180003382.01.T01:intron 30.0%
! AGCAAGGATGCAATTTATTT+TGG + Chr1:61463690-61463709 None:intergenic 30.0%
! AGTAAAAAGTGCAAATAGAC+GGG + Chr1:61464534-61464553 None:intergenic 30.0%
! ATAATTTGGGATTGATCTCA+AGG + Chr1:61464270-61464289 None:intergenic 30.0%
! ATTATTTCTTTGTTACCTCC+CGG + Chr1:61460748-61460767 None:intergenic 30.0%
! ATTTGTTGCAGAAGTCTATT+GGG - Chr1:61458794-61458813 MsG0180003382.01.T01:CDS 30.0%
! CTGAAGGCGAAATTTAATTT+GGG - Chr1:61457329-61457348 MsG0180003382.01.T01:CDS 30.0%
! GAATGAAATTTTCCCAAATG+AGG - Chr1:61466433-61466452 MsG0180003382.01.T01:intron 30.0%
! TAATGCTTTTAAATCTGTCC+AGG - Chr1:61462657-61462676 MsG0180003382.01.T01:intron 30.0%
! TAATTTGGGATTGATCTCAA+GGG + Chr1:61464269-61464288 None:intergenic 30.0%
! TATTTAATGTCGTGATTTGG+AGG + Chr1:61463716-61463735 None:intergenic 30.0%
! TATTTCTTTGAAGAACATGC+TGG + Chr1:61463519-61463538 None:intergenic 30.0%
! TGATGGTAAATGTGTTTTCA+GGG - Chr1:61463171-61463190 MsG0180003382.01.T01:intron 30.0%
! TTTTATGAGAAAACACCTGA+TGG + Chr1:61460278-61460297 None:intergenic 30.0%
! TTTTGGACATGTAAGGTAAT+TGG + Chr1:61466468-61466487 None:intergenic 30.0%
!! ACTTTAAAGCAACAGTGAAT+TGG - Chr1:61464579-61464598 MsG0180003382.01.T01:intron 30.0%
!! CAATAAACGAGAGAGTATTT+AGG - Chr1:61467539-61467558 MsG0180003382.01.T01:intron 30.0%
!! CAGTATTGAATTCTAGAACT+AGG - Chr1:61459676-61459695 MsG0180003382.01.T01:intron 30.0%
!! GCAAGGATGCAATTTATTTT+GGG + Chr1:61463689-61463708 None:intergenic 30.0%
!! GTAGTTTGAATAGGTTGATA+AGG + Chr1:61466188-61466207 None:intergenic 30.0%
!! TGAAGGCGAAATTTAATTTG+GGG - Chr1:61457330-61457349 MsG0180003382.01.T01:CDS 30.0%
!! TGGTTTTTCACTTTTGACTA+TGG - Chr1:61463909-61463928 MsG0180003382.01.T01:intron 30.0%
!!! AAAGGAGCATTTTTTTTTGG+TGG - Chr1:61464926-61464945 MsG0180003382.01.T01:intron 30.0%
!!! AACAATTTTTGAAGCAGCAA+AGG + Chr1:61466621-61466640 None:intergenic 30.0%
!!! ACAATTTTTGAAGCAGCAAA+GGG + Chr1:61466620-61466639 None:intergenic 30.0%
!!! CAAGGATGCAATTTATTTTG+GGG + Chr1:61463688-61463707 None:intergenic 30.0%
!!! GAACTCAACCAATTTTTTTG+TGG - Chr1:61466541-61466560 MsG0180003382.01.T01:intron 30.0%
!!! GCTAAAGGAGCATTTTTTTT+TGG - Chr1:61464923-61464942 MsG0180003382.01.T01:intron 30.0%
!!! TACCCTTTTTTCATGTTTTC+AGG - Chr1:61458206-61458225 MsG0180003382.01.T01:intron 30.0%
!!! TATTGTTTTTGTTCCTACCA+GGG - Chr1:61458890-61458909 MsG0180003382.01.T01:CDS 30.0%
!!! TTATTGTTTTTGTTCCTACC+AGG - Chr1:61458889-61458908 MsG0180003382.01.T01:CDS 30.0%
AAAGAACATAGGGAAGAAGA+TGG - Chr1:61457567-61457586 MsG0180003382.01.T01:intron 35.0%
AAATCACTTCGCCTTTAATC+AGG - Chr1:61463994-61464013 MsG0180003382.01.T01:intron 35.0%
AAGTTTCTTCAAGCTCAAGT+TGG - Chr1:61466815-61466834 MsG0180003382.01.T01:intron 35.0%
AATCTTTAAGCACGAGCAAA+TGG - Chr1:61463581-61463600 MsG0180003382.01.T01:intron 35.0%
ACAAACGGAAAAGACCAAAA+TGG - Chr1:61457757-61457776 MsG0180003382.01.T01:intron 35.0%
ACAAGTAGTTGATCTTGACA+AGG + Chr1:61466371-61466390 None:intergenic 35.0%
ACATCACATTCTATATGCAG+GGG + Chr1:61458486-61458505 None:intergenic 35.0%
AGAATCACTTAGTTCCAATG+AGG - Chr1:61459082-61459101 MsG0180003382.01.T01:CDS 35.0%
AGAATGGAAAAAACAGCTTG+TGG - Chr1:61463117-61463136 MsG0180003382.01.T01:intron 35.0%
AGAATTTGCCACAAACGATT+AGG + Chr1:61458677-61458696 None:intergenic 35.0%
AGATAAGACTTCACTGTTAC+TGG - Chr1:61459058-61459077 MsG0180003382.01.T01:CDS 35.0%
AGCCATCATGTTTAAACAAC+GGG - Chr1:61462356-61462375 MsG0180003382.01.T01:intron 35.0%
AGCCTCTTGTGTAAAAAACA+GGG - Chr1:61461307-61461326 MsG0180003382.01.T01:intron 35.0%
AGCCTCTTGTGTAAAAAAGA+GGG + Chr1:61459329-61459348 None:intergenic 35.0%
AGGAAACGGTTAATAAGAAG+AGG - Chr1:61467509-61467528 MsG0180003382.01.T01:intron 35.0%
AGTAGTGATTTCTGAGTTGT+TGG + Chr1:61466210-61466229 None:intergenic 35.0%
AGTTGGAATGCTTCAACTTA+TGG - Chr1:61466832-61466851 MsG0180003382.01.T01:intron 35.0%
AGTTTGTGTAGATCTTCACT+TGG + Chr1:61467769-61467788 None:intergenic 35.0%
ATAGACTTCTGCAACAAATG+TGG + Chr1:61458793-61458812 None:intergenic 35.0%
ATCTTTAAGCACGAGCAAAT+GGG - Chr1:61463582-61463601 MsG0180003382.01.T01:intron 35.0%
ATGCCATTACTACTTCAACA+AGG + Chr1:61462983-61463002 None:intergenic 35.0%
ATGTAAATGGGTACCTGAAA+AGG + Chr1:61458137-61458156 None:intergenic 35.0%
ATTAGGCTGTTTACCAAAAC+AGG + Chr1:61461535-61461554 None:intergenic 35.0%
ATTGAGACAATAGGTAGTCA+TGG + Chr1:61467302-61467321 None:intergenic 35.0%
CAAGCATAAGTCCTGATTAA+AGG + Chr1:61464008-61464027 None:intergenic 35.0%
CAAGTAGTTGATCTTGACAA+GGG + Chr1:61466370-61466389 None:intergenic 35.0%
CAAGTGTATATCAAATGAGC+TGG - Chr1:61467567-61467586 MsG0180003382.01.T01:intron 35.0%
CACAGTTTCTCTTGAACAAA+TGG + Chr1:61467802-61467821 None:intergenic 35.0%
CAGTGTGTAACAGACTAAAA+AGG + Chr1:61461414-61461433 None:intergenic 35.0%
CATTGGATACGACACTAATA+CGG + Chr1:61465129-61465148 None:intergenic 35.0%
CCGTCATATAATTCAGGATA+TGG - Chr1:61464040-61464059 MsG0180003382.01.T01:intron 35.0%
CGGTTAATAAGAAGAGGAAA+TGG - Chr1:61467515-61467534 MsG0180003382.01.T01:intron 35.0%
CTAGATTGTCTGTTGAGAAT+TGG - Chr1:61462711-61462730 MsG0180003382.01.T01:intron 35.0%
CTGAAAACACATTTACCATC+AGG + Chr1:61463172-61463191 None:intergenic 35.0%
CTGCTGTTATCCTTATTCTT+TGG - Chr1:61464613-61464632 MsG0180003382.01.T01:intron 35.0%
CTGCTTGATACAATCGATAT+CGG - Chr1:61465098-61465117 MsG0180003382.01.T01:intron 35.0%
CTGTTATCCTTATTCTTTGG+AGG - Chr1:61464616-61464635 MsG0180003382.01.T01:intron 35.0%
CTTCAACTTAGGTTATCTTC+CGG - Chr1:61460726-61460745 MsG0180003382.01.T01:intron 35.0%
CTTGAATGAAATATCTGGTG+GGG + Chr1:61465235-61465254 None:intergenic 35.0%
CTTGTGTAAAAAACAGGGTA+AGG - Chr1:61461312-61461331 MsG0180003382.01.T01:intron 35.0%
CTTGTGTAAAAAAGAGGGTA+AGG + Chr1:61459324-61459343 None:intergenic 35.0%
CTTTAATCAGGACTTATGCT+TGG - Chr1:61464006-61464025 MsG0180003382.01.T01:intron 35.0%
GAAAATTGAGTACCTAACGT+AGG + Chr1:61459824-61459843 None:intergenic 35.0%
GAAACATGTGTGATACTCAT+AGG + Chr1:61465307-61465326 None:intergenic 35.0%
GACAATGCATAATATATGCC+AGG + Chr1:61464971-61464990 None:intergenic 35.0%
GACATCACATTCTATATGCA+GGG + Chr1:61458487-61458506 None:intergenic 35.0%
GACTAAATATATTGCTCCCA+CGG + Chr1:61461512-61461531 None:intergenic 35.0%
GACTTGAATGAAATATCTGG+TGG + Chr1:61465237-61465256 None:intergenic 35.0%
GAGAAAAGAAGCCATGAAAA+TGG - Chr1:61457385-61457404 MsG0180003382.01.T01:CDS 35.0%
GAGATGTACCTTTAATGGAA+CGG - Chr1:61463316-61463335 MsG0180003382.01.T01:intron 35.0%
GAGCCATCATGTTTAAACAA+CGG - Chr1:61462355-61462374 MsG0180003382.01.T01:intron 35.0%
GATGTGTGTAAAAAGTAGAG+AGG - Chr1:61463030-61463049 MsG0180003382.01.T01:intron 35.0%
GCAAAGTTGTTACGAGAAAA+GGG - Chr1:61464220-61464239 MsG0180003382.01.T01:intron 35.0%
GCAAGCTACAAATGCTAAAT+CGG - Chr1:61462741-61462760 MsG0180003382.01.T01:intron 35.0%
GCAATGAACAAACAAACTCT+AGG + Chr1:61467094-61467113 None:intergenic 35.0%
GCAGGCATTTACATTATCTT+CGG + Chr1:61462796-61462815 None:intergenic 35.0%
GGCTATGTAACTGTTTAACA+AGG - Chr1:61467588-61467607 MsG0180003382.01.T01:intron 35.0%
GGTAAACGGAAGAAGATTTA+TGG - Chr1:61457778-61457797 MsG0180003382.01.T01:intron 35.0%
GTAGTGTTATAGAGAGCTTA+TGG - Chr1:61461674-61461693 MsG0180003382.01.T01:intron 35.0%
GTTCAATGTGAGAAGAAAGT+TGG - Chr1:61466647-61466666 MsG0180003382.01.T01:intron 35.0%
TAAAGTTGTTGTCATGTGAC+TGG - Chr1:61461254-61461273 MsG0180003382.01.T01:intron 35.0%
TAATGGTTATGTGTACGCAT+TGG - Chr1:61459016-61459035 MsG0180003382.01.T01:CDS 35.0%
TACGAAATCCTAATCGTTTG+TGG - Chr1:61458666-61458685 MsG0180003382.01.T01:CDS 35.0%
TACTAGTGTGTTAACAGACT+AGG + Chr1:61461236-61461255 None:intergenic 35.0%
TGAAGGGAAAAAAAGACTAG+GGG + Chr1:61465857-61465876 None:intergenic 35.0%
TGAATCTTTGCTAGGTTTGA+GGG + Chr1:61465894-61465913 None:intergenic 35.0%
TGGGGATGAAAAAGAACATA+GGG - Chr1:61457557-61457576 MsG0180003382.01.T01:intron 35.0%
TGGTGAAATCTTCCTCATTT+GGG + Chr1:61466448-61466467 None:intergenic 35.0%
TGTAAATGGGTACCTGAAAA+GGG + Chr1:61458136-61458155 None:intergenic 35.0%
TTAGCATAGTGGTTTATGTC+GGG - Chr1:61460836-61460855 MsG0180003382.01.T01:intron 35.0%
TTAGGCTGTTTACCAAAACA+GGG + Chr1:61461534-61461553 None:intergenic 35.0%
TTATGCATTGTCCTTGCTAA+AGG - Chr1:61464979-61464998 MsG0180003382.01.T01:intron 35.0%
TTCAACTTAGGTTATCTTCC+GGG - Chr1:61460727-61460746 MsG0180003382.01.T01:intron 35.0%
TTCCCACTTATTCACCTTAA+GGG + Chr1:61458442-61458461 None:intergenic 35.0%
TTGAATGAAATATCTGGTGG+GGG + Chr1:61465234-61465253 None:intergenic 35.0%
TTGGCTTCAATTAACATGCT+TGG - Chr1:61462605-61462624 MsG0180003382.01.T01:intron 35.0%
TTGGGGATGAAAAAGAACAT+AGG - Chr1:61457556-61457575 MsG0180003382.01.T01:intron 35.0%
TTGGTGAAATCTTCCTCATT+TGG + Chr1:61466449-61466468 None:intergenic 35.0%
TTTCCCACTTATTCACCTTA+AGG + Chr1:61458443-61458462 None:intergenic 35.0%
! AAACATTTTCCTTCAAGGCT+TGG + Chr1:61463430-61463449 None:intergenic 35.0%
! AAATACAATAGATTGGCCGT+GGG - Chr1:61461493-61461512 MsG0180003382.01.T01:intron 35.0%
! AAGTCTTGGATTTGGAACAT+CGG - Chr1:61462414-61462433 MsG0180003382.01.T01:intron 35.0%
! AATGTGGTGACAAACTCTTT+TGG + Chr1:61467847-61467866 None:intergenic 35.0%
! AATTGACGGATGGAATTGTT+AGG - Chr1:61467393-61467412 MsG0180003382.01.T01:intron 35.0%
! AGAACAGAGATGAGATTTTG+TGG - Chr1:61462051-61462070 MsG0180003382.01.T01:intron 35.0%
! AGAGCATTTGCCTAGAAATA+TGG - Chr1:61465447-61465466 MsG0180003382.01.T01:intron 35.0%
! CAACTTCCTCCATTTTACTA+TGG + Chr1:61459789-61459808 None:intergenic 35.0%
! CATTTGTTGCAGAAGTCTAT+TGG - Chr1:61458793-61458812 MsG0180003382.01.T01:CDS 35.0%
! CTGATGGTAAATGTGTTTTC+AGG - Chr1:61463170-61463189 MsG0180003382.01.T01:intron 35.0%
! CTTCCTCTTTGGAAAGAAAA+GGG - Chr1:61458250-61458269 MsG0180003382.01.T01:intron 35.0%
! GATACTAGTTTGTCATCAGT+GGG + Chr1:61465196-61465215 None:intergenic 35.0%
! GGCACATAAAGTATCAAACT+TGG + Chr1:61461175-61461194 None:intergenic 35.0%
! GTCTAGAATATGTCAAGTCT+TGG - Chr1:61462400-61462419 MsG0180003382.01.T01:intron 35.0%
! TAAATACAATAGATTGGCCG+TGG - Chr1:61461492-61461511 MsG0180003382.01.T01:intron 35.0%
! TCATCTTTTCTTCAATGGTG+AGG + Chr1:61460347-61460366 None:intergenic 35.0%
! TCTACATTATAAGCGTTGTG+TGG - Chr1:61462936-61462955 MsG0180003382.01.T01:intron 35.0%
! TCTTCTTCCGTTTACCATTT+TGG + Chr1:61457774-61457793 None:intergenic 35.0%
! TGATACTAGTTTGTCATCAG+TGG + Chr1:61465197-61465216 None:intergenic 35.0%
!! ACATTGATTTCTGGAGATGT+TGG + Chr1:61458008-61458027 None:intergenic 35.0%
!! AGAGAAGCAACATTGATTTC+TGG + Chr1:61458017-61458036 None:intergenic 35.0%
!! CTTTTTAGTCTGTTACACAC+TGG - Chr1:61461412-61461431 MsG0180003382.01.T01:intron 35.0%
!! GAAGGCGAAATTTAATTTGG+GGG - Chr1:61457331-61457350 MsG0180003382.01.T01:CDS 35.0%
!! GAGTTGTTGGTAGTTTGAAT+AGG + Chr1:61466197-61466216 None:intergenic 35.0%
!! GCTGACTTGAATGAAATATC+TGG + Chr1:61465240-61465259 None:intergenic 35.0%
!! GGTGTACTGATTTGGAAATA+TGG - Chr1:61464691-61464710 MsG0180003382.01.T01:intron 35.0%
!!! AGCATTTTTTTTTGGTGGTC+GGG - Chr1:61464931-61464950 MsG0180003382.01.T01:intron 35.0%
!!! GAGCATTTTTTTTTGGTGGT+CGG - Chr1:61464930-61464949 MsG0180003382.01.T01:intron 35.0%
!!! TACCCTCTTTTTTACACAAG+AGG - Chr1:61459324-61459343 MsG0180003382.01.T01:intron 35.0%
!!! TACCCTGTTTTTTACACAAG+AGG + Chr1:61461312-61461331 None:intergenic 35.0%
!!! TGTTTTAAAAAAGGGCAACC+CGG - Chr1:61459232-61459251 MsG0180003382.01.T01:intron 35.0%
!!! TTGTTTTAAATGGAGACCGT+TGG + Chr1:61457649-61457668 None:intergenic 35.0%
AACCAAATTGCGCAATGCTA+AGG + Chr1:61458982-61459001 None:intergenic 40.0%
AAGAAATATTACCGTCCACC+AGG + Chr1:61460865-61460884 None:intergenic 40.0%
AAGCAAAAGGGTTAGGGTTA+GGG + Chr1:61466583-61466602 None:intergenic 40.0%
ACCCCGTTGTTTAAACATGA+TGG + Chr1:61462361-61462380 None:intergenic 40.0%
ACGATATGAGAACTTAGCCT+GGG + Chr1:61464329-61464348 None:intergenic 40.0%
ACTTAGATGCTCCTTTAGCA+AGG + Chr1:61464993-61465012 None:intergenic 40.0%
AGAAATATTACCGTCCACCA+GGG + Chr1:61460864-61460883 None:intergenic 40.0%
AGAAGCCATGAAAATGGAAG+AGG - Chr1:61457391-61457410 MsG0180003382.01.T01:CDS 40.0%
AGACACAACCGTTCCATTAA+AGG + Chr1:61463327-61463346 None:intergenic 40.0%
AGATGGTTTGAGAGAGCTTA+TGG + Chr1:61461718-61461737 None:intergenic 40.0%
AGGAACTGATTAGATAAGGC+TGG - Chr1:61464198-61464217 MsG0180003382.01.T01:intron 40.0%
AGGTGAATAAGTGGGAAATC+CGG - Chr1:61458445-61458464 MsG0180003382.01.T01:CDS 40.0%
AGTGTCTCAACGATCAACAA+AGG + Chr1:61463797-61463816 None:intergenic 40.0%
AGTTGATCTTGACAAGGGTT+AGG + Chr1:61466365-61466384 None:intergenic 40.0%
ATCTCTGCTGTGTTCATCTT+TGG + Chr1:61466770-61466789 None:intergenic 40.0%
CAAAATCATGCACGTGCTAA+AGG - Chr1:61464908-61464927 MsG0180003382.01.T01:intron 40.0%
CAAAGGAAGCAAAAGGGTTA+GGG + Chr1:61466589-61466608 None:intergenic 40.0%
CAATGACTGTATCTCCTTTC+TGG + Chr1:61458932-61458951 None:intergenic 40.0%
CACATTTACCATCAGGATCT+CGG + Chr1:61463165-61463184 None:intergenic 40.0%
CACCCTTAAGGTGAATAAGT+GGG - Chr1:61458437-61458456 MsG0180003382.01.T01:CDS 40.0%
CAGAAAATATCACCGCAAAC+CGG - Chr1:61459509-61459528 MsG0180003382.01.T01:intron 40.0%
CAGAAGAGGCAAATCAGATT+TGG - Chr1:61462505-61462524 MsG0180003382.01.T01:intron 40.0%
CAGAGAGATGATGCAAGTTA+AGG + Chr1:61459846-61459865 None:intergenic 40.0%
CAGCCTCTTGTGTAAAAAAC+AGG - Chr1:61461306-61461325 MsG0180003382.01.T01:intron 40.0%
CAGCCTCTTGTGTAAAAAAG+AGG + Chr1:61459330-61459349 None:intergenic 40.0%
CGTACAATACACCAAATGGT+GGG + Chr1:61459298-61459317 None:intergenic 40.0%
CGTCCTTGTTGAAGTAGTAA+TGG - Chr1:61462977-61462996 MsG0180003382.01.T01:intron 40.0%
CTACCTCAAAGGAAGCAAAA+GGG + Chr1:61466595-61466614 None:intergenic 40.0%
CTCGGAACTTCTGAATTAAC+AGG + Chr1:61463147-61463166 None:intergenic 40.0%
CTGTTTCAGACCCTTAAGAA+TGG + Chr1:61467902-61467921 None:intergenic 40.0%
GAAATCGTTGATGCTGTTGT+TGG - Chr1:61457504-61457523 MsG0180003382.01.T01:CDS 40.0%
GAGTTCAAAAGCTCTTGTTG+TGG + Chr1:61466527-61466546 None:intergenic 40.0%
GCACGCAAGTGAAACAAAAT+TGG + Chr1:61460000-61460019 None:intergenic 40.0%
GCATACTCTGTTGTCAATAG+CGG + Chr1:61462258-61462277 None:intergenic 40.0%
GCCATCATGTTTAAACAACG+GGG - Chr1:61462357-61462376 MsG0180003382.01.T01:intron 40.0%
GGACATCACATTCTATATGC+AGG + Chr1:61458488-61458507 None:intergenic 40.0%
GGCAAAGTTGTTACGAGAAA+AGG - Chr1:61464219-61464238 MsG0180003382.01.T01:intron 40.0%
GGTTTGAGAGAGAGATTGAA+GGG + Chr1:61465873-61465892 None:intergenic 40.0%
GTAAAAAGTAGAGAGGAGGA+GGG - Chr1:61463037-61463056 MsG0180003382.01.T01:intron 40.0%
GTGAATCTTTGCTAGGTTTG+AGG + Chr1:61465895-61465914 None:intergenic 40.0%
GTGTGTAAAAAGTAGAGAGG+AGG - Chr1:61463033-61463052 MsG0180003382.01.T01:intron 40.0%
GTTGATCTTGACAAGGGTTA+GGG + Chr1:61466364-61466383 None:intergenic 40.0%
GTTGCTGATGAGTCACATAA+TGG - Chr1:61458999-61459018 MsG0180003382.01.T01:CDS 40.0%
TAAAAGAGTTTGGTCCATGG+AGG + Chr1:61460211-61460230 None:intergenic 40.0%
TACGAGAAAAGGGACCAAAA+AGG - Chr1:61464230-61464249 MsG0180003382.01.T01:intron 40.0%
TAGACTCTTCCATGAACCAA+CGG - Chr1:61457630-61457649 MsG0180003382.01.T01:intron 40.0%
TATAAAGTGAGGGGTAACCT+TGG + Chr1:61459411-61459430 None:intergenic 40.0%
TCAAAGGAAGCAAAAGGGTT+AGG + Chr1:61466590-61466609 None:intergenic 40.0%
TCAATATACAACGGCTTGTC+CGG + Chr1:61459531-61459550 None:intergenic 40.0%
TCACCCTTAAGGTGAATAAG+TGG - Chr1:61458436-61458455 MsG0180003382.01.T01:CDS 40.0%
TCACCTTAAGGGTGAATTTC+TGG + Chr1:61458431-61458450 None:intergenic 40.0%
TCATATACGCCCCTTACTAT+AGG - Chr1:61464178-61464197 MsG0180003382.01.T01:intron 40.0%
TCCATTGCAAAATGGCTGAT+TGG - Chr1:61462333-61462352 MsG0180003382.01.T01:intron 40.0%
TCTACCTCAAAGGAAGCAAA+AGG + Chr1:61466596-61466615 None:intergenic 40.0%
TGAAAAGGGAGAATCGTCTT+TGG + Chr1:61458122-61458141 None:intergenic 40.0%
TGAACCCACAAACTATCATG+AGG - Chr1:61465692-61465711 MsG0180003382.01.T01:intron 40.0%
TGCATAATATATGCCAGGTC+CGG + Chr1:61464966-61464985 None:intergenic 40.0%
TGCATGCATAGTTGTCAAAG+CGG - Chr1:61461750-61461769 MsG0180003382.01.T01:intron 40.0%
TGGAAACATGTTGTCCAGAA+AGG - Chr1:61458915-61458934 MsG0180003382.01.T01:CDS 40.0%
TGTAAAAAGTAGAGAGGAGG+AGG - Chr1:61463036-61463055 MsG0180003382.01.T01:intron 40.0%
TGTAAATAGTCACATGGGCA+TGG - Chr1:61460045-61460064 MsG0180003382.01.T01:intron 40.0%
TGTATCTCTCACTACAGAAG+AGG - Chr1:61462491-61462510 MsG0180003382.01.T01:intron 40.0%
TGTGGACCGTCATATAATTC+AGG - Chr1:61464034-61464053 MsG0180003382.01.T01:intron 40.0%
TTAGCTAGAGTGATTGTAGC+TGG + Chr1:61464888-61464907 None:intergenic 40.0%
TTCAAAGCAATGCCTACGTT+AGG - Chr1:61459809-61459828 MsG0180003382.01.T01:intron 40.0%
TTCAGACCCTTAAGAATGGT+AGG + Chr1:61467898-61467917 None:intergenic 40.0%
TTGAATTTGAGAAGCCTCCA+TGG - Chr1:61460194-61460213 MsG0180003382.01.T01:intron 40.0%
TTGTGTAGATCTTCACTTGG+AGG + Chr1:61467766-61467785 None:intergenic 40.0%
TTTATCGATCTCACTCCATC+AGG - Chr1:61460260-61460279 MsG0180003382.01.T01:intron 40.0%
! AAAATTGGTATCGGAGCACA+TGG + Chr1:61462767-61462786 None:intergenic 40.0%
! AAAGACGATTCTCCCTTTTC+AGG - Chr1:61458121-61458140 MsG0180003382.01.T01:intron 40.0%
! AAATCTGAAACAGTCGGGAA+TGG - Chr1:61463276-61463295 MsG0180003382.01.T01:intron 40.0%
! ACTGCCTCATGATAGTTTGT+GGG + Chr1:61465699-61465718 None:intergenic 40.0%
! AGTCAATCCAAATTGGCTCT+TGG - Chr1:61462297-61462316 MsG0180003382.01.T01:intron 40.0%
! AGTCTCTGACTTAGCTGTTT+TGG + Chr1:61464130-61464149 None:intergenic 40.0%
! CGGAAGATAACCTAAGTTGA+AGG + Chr1:61460728-61460747 None:intergenic 40.0%
! GAGAGAGTGTGTTAAGGAAA+CGG - Chr1:61467495-61467514 MsG0180003382.01.T01:intron 40.0%
! GCTTCCTCTTTGGAAAGAAA+AGG - Chr1:61458249-61458268 MsG0180003382.01.T01:intron 40.0%
! GTTGTTGTTATGTGACCGAA+AGG + Chr1:61459375-61459394 None:intergenic 40.0%
! GTTTTTGTGAGCTTCCTCTT+TGG - Chr1:61458239-61458258 MsG0180003382.01.T01:intron 40.0%
! TAACCCTTTTGCTTCCTTTG+AGG - Chr1:61466589-61466608 MsG0180003382.01.T01:intron 40.0%
! TAGCATAGCTTTTGGCGTTT+TGG + Chr1:61466485-61466504 None:intergenic 40.0%
! TGATTTCTGGAGATGTTGGT+TGG + Chr1:61458004-61458023 None:intergenic 40.0%
! TTGCCCTTTTCTTTCCAAAG+AGG + Chr1:61458256-61458275 None:intergenic 40.0%
! TTTTCTTCAATGGTGAGGCT+TGG + Chr1:61460342-61460361 None:intergenic 40.0%
! TTTTTGTTCCTACCAGGGTA+TGG - Chr1:61458895-61458914 MsG0180003382.01.T01:CDS 40.0%
!! GACTTGATGGTGTACTGATT+TGG - Chr1:61464683-61464702 MsG0180003382.01.T01:intron 40.0%
!! GAGCATAACTCAAGTTGGTA+GGG + Chr1:61458509-61458528 None:intergenic 40.0%
!! GTGAGAAGAAAGTTGGTGAA+AGG - Chr1:61466654-61466673 MsG0180003382.01.T01:intron 40.0%
!! TCCAATCAGCCATTTTGCAA+TGG + Chr1:61462337-61462356 None:intergenic 40.0%
!! TGAGCATAACTCAAGTTGGT+AGG + Chr1:61458510-61458529 None:intergenic 40.0%
!! TGTTTTTGTGAGTAGGCTAG+TGG - Chr1:61458405-61458424 MsG0180003382.01.T01:intron 40.0%
!! TTTGGCGTTTTGGACATGTA+AGG + Chr1:61466475-61466494 None:intergenic 40.0%
!!! TAGCTGTTTTGGCAGATGTT+GGG + Chr1:61464119-61464138 None:intergenic 40.0%
!!! TTAGCTGTTTTGGCAGATGT+TGG + Chr1:61464120-61464139 None:intergenic 40.0%
AAACACGCCAAGAGCCAATT+TGG + Chr1:61462307-61462326 None:intergenic 45.0%
AAATCTGTCCAGGGAAGAGT+TGG - Chr1:61462667-61462686 MsG0180003382.01.T01:intron 45.0%
AACTTAGGTTATCTTCCGGG+AGG - Chr1:61460730-61460749 MsG0180003382.01.T01:intron 45.0%
AATAGTCACATGGGCATGGT+CGG - Chr1:61460049-61460068 MsG0180003382.01.T01:intron 45.0%
AATGGAAAAGATGGATGGGC+GGG - Chr1:61463294-61463313 MsG0180003382.01.T01:intron 45.0%
ACAAAGAGCCTAGGATAAGG+AGG - Chr1:61464063-61464082 MsG0180003382.01.T01:intron 45.0%
ACAGCTAAGTCAGAGACTCT+AGG - Chr1:61464132-61464151 MsG0180003382.01.T01:intron 45.0%
ACAGTCATTGATGCGACATG+TGG - Chr1:61458942-61458961 MsG0180003382.01.T01:CDS 45.0%
ACAGTCGGGAATGGAAAAGA+TGG - Chr1:61463285-61463304 MsG0180003382.01.T01:intron 45.0%
ACATGTTTCCATACCCTGGT+AGG + Chr1:61458906-61458925 None:intergenic 45.0%
ACTAAGTGGAGATGGCAACA+TGG - Chr1:61463377-61463396 MsG0180003382.01.T01:intron 45.0%
ACTATGCTAATAAGCCCTCC+TGG + Chr1:61460826-61460845 None:intergenic 45.0%
ACTGAGAAGACACAAGTGCT+TGG - Chr1:61466725-61466744 MsG0180003382.01.T01:intron 45.0%
AGAAGTCTTCTGCGAGAAGA+AGG + Chr1:61457965-61457984 None:intergenic 45.0%
AGCAAAGGGTTCTACCTCAA+AGG + Chr1:61466606-61466625 None:intergenic 45.0%
AGGAGGGCTTATTAGCATAG+TGG - Chr1:61460825-61460844 MsG0180003382.01.T01:intron 45.0%
AGGATATGGACAAAGAGCCT+AGG - Chr1:61464054-61464073 MsG0180003382.01.T01:intron 45.0%
AGGCAAAAGCGGAACAAAAG+CGG + Chr1:61462165-61462184 None:intergenic 45.0%
ATGCATAAGCACTAGCGAGA+TGG + Chr1:61461735-61461754 None:intergenic 45.0%
ATGCTACGAGGAGAAAAGAG+AGG - Chr1:61466499-61466518 MsG0180003382.01.T01:intron 45.0%
ATGTTGCCATCTCCACTTAG+TGG + Chr1:61463378-61463397 None:intergenic 45.0%
ATTGATGCGACATGTGGCAA+CGG - Chr1:61458948-61458967 MsG0180003382.01.T01:CDS 45.0%
CACCTTAGCATTGCGCAATT+TGG - Chr1:61458977-61458996 MsG0180003382.01.T01:CDS 45.0%
CACGATATGAGAACTTAGCC+TGG + Chr1:61464330-61464349 None:intergenic 45.0%
CACTGCCTCATGATAGTTTG+TGG + Chr1:61465700-61465719 None:intergenic 45.0%
CACTTAGTTCCAATGAGGTG+AGG - Chr1:61459087-61459106 MsG0180003382.01.T01:CDS 45.0%
CAGACTAAAAAGGGCAATCC+CGG + Chr1:61461404-61461423 None:intergenic 45.0%
CATAATATATGCCAGGTCCG+GGG + Chr1:61464964-61464983 None:intergenic 45.0%
CGGGAATGGAAAAGATGGAT+GGG - Chr1:61463290-61463309 MsG0180003382.01.T01:intron 45.0%
CGTACAATACCCCAAATGGT+GGG - Chr1:61461338-61461357 MsG0180003382.01.T01:intron 45.0%
CGTTGATGCTGTTGTTGGAA+TGG - Chr1:61457509-61457528 MsG0180003382.01.T01:CDS 45.0%
CTGAGAAGACACAAGTGCTT+GGG - Chr1:61466726-61466745 MsG0180003382.01.T01:intron 45.0%
GAACATAGGGAAGAAGATGG+AGG - Chr1:61457570-61457589 MsG0180003382.01.T01:intron 45.0%
GAAGCAAAAGGGTTAGGGTT+AGG + Chr1:61466584-61466603 None:intergenic 45.0%
GAATGGAAAAGATGGATGGG+CGG - Chr1:61463293-61463312 MsG0180003382.01.T01:intron 45.0%
GACAACATGTTTCCATACCC+TGG + Chr1:61458910-61458929 None:intergenic 45.0%
GACTTATGCTTGGGAGATTG+TGG - Chr1:61464016-61464035 MsG0180003382.01.T01:intron 45.0%
GCAGAAGTCTATTGGGCAAT+GGG - Chr1:61458801-61458820 MsG0180003382.01.T01:CDS 45.0%
GCATAATATATGCCAGGTCC+GGG + Chr1:61464965-61464984 None:intergenic 45.0%
GCGTACAATACACCAAATGG+TGG + Chr1:61459299-61459318 None:intergenic 45.0%
GCTGCGTACAATACACCAAA+TGG + Chr1:61459302-61459321 None:intergenic 45.0%
GCTTGACATAGCGTTCCAAA+TGG + Chr1:61460127-61460146 None:intergenic 45.0%
GGCTGGTGATATTGTGCTAA+TGG - Chr1:61457412-61457431 MsG0180003382.01.T01:CDS 45.0%
GGGTTTGAGAGAGAGATTGA+AGG + Chr1:61465874-61465893 None:intergenic 45.0%
GGTGAATAAGTGGGAAATCC+GGG - Chr1:61458446-61458465 MsG0180003382.01.T01:CDS 45.0%
GTGAATAAGTGGGAAATCCG+GGG - Chr1:61458447-61458466 MsG0180003382.01.T01:CDS 45.0%
GTTAGCTGTGCTTGTAACCA+TGG - Chr1:61460571-61460590 MsG0180003382.01.T01:intron 45.0%
GTTATGTGACCGAAAGGTCA+CGG + Chr1:61459369-61459388 None:intergenic 45.0%
GTTCTATCACCAAGCCTTGA+AGG - Chr1:61463418-61463437 MsG0180003382.01.T01:intron 45.0%
GTTGTTGTCATGTGACTGGA+AGG - Chr1:61461258-61461277 MsG0180003382.01.T01:intron 45.0%
TAGTTGTCAAAGCGGAAACG+CGG - Chr1:61461758-61461777 MsG0180003382.01.T01:intron 45.0%
TCGGGAATGGAAAAGATGGA+TGG - Chr1:61463289-61463308 MsG0180003382.01.T01:intron 45.0%
TGAAACAGTGTCGTGTGAGA+AGG - Chr1:61457357-61457376 MsG0180003382.01.T01:CDS 45.0%
TGCAGAAGTCTATTGGGCAA+TGG - Chr1:61458800-61458819 MsG0180003382.01.T01:CDS 45.0%
TGCGTGAGCATAACTCAAGT+TGG + Chr1:61458514-61458533 None:intergenic 45.0%
TGGAACGCTATGTCAAGCAA+TGG - Chr1:61460129-61460148 MsG0180003382.01.T01:intron 45.0%
TGGACAAAGAGCCTAGGATA+AGG - Chr1:61464060-61464079 MsG0180003382.01.T01:intron 45.0%
TGGCCAGAAATTCACCCTTA+AGG - Chr1:61458425-61458444 MsG0180003382.01.T01:CDS 45.0%
TGTAGATCTTCACTTGGAGG+AGG + Chr1:61467763-61467782 None:intergenic 45.0%
TGTAGGTTATGAAGCACACG+CGG + Chr1:61465153-61465172 None:intergenic 45.0%
TTATGTGACCGAAAGGTCAC+GGG + Chr1:61459368-61459387 None:intergenic 45.0%
TTGGCAGATGTTGGGGATAA+GGG + Chr1:61464111-61464130 None:intergenic 45.0%
TTGTCAATAGCGGTCTAACG+CGG + Chr1:61462248-61462267 None:intergenic 45.0%
TTGTCTCTTCTCTCTCTCTC+AGG - Chr1:61465977-61465996 MsG0180003382.01.T01:intron 45.0%
TTTGGCAGATGTTGGGGATA+AGG + Chr1:61464112-61464131 None:intergenic 45.0%
! ACCAGCCTCTTCCATTTTCA+TGG + Chr1:61457399-61457418 None:intergenic 45.0%
! GAGAGAGAGAGAGTGTGTTA+AGG - Chr1:61467489-61467508 MsG0180003382.01.T01:intron 45.0%
! TATAAGCGTTGTGTGGACTG+TGG - Chr1:61462943-61462962 MsG0180003382.01.T01:intron 45.0%
! TCTCCTCGTAGCATAGCTTT+TGG + Chr1:61466493-61466512 None:intergenic 45.0%
! TGTTGGTTGGAGAAGGAAGA+AGG + Chr1:61457991-61458010 None:intergenic 45.0%
! TTACACAAGAGGCTGTTTCC+AGG - Chr1:61459335-61459354 MsG0180003382.01.T01:intron 45.0%
! TTACACAAGAGGCTGTTTCC+AGG + Chr1:61459354-61459335 None:intergenic 45.0%
!! AAATGGAGACCGTTGGTTCA+TGG + Chr1:61457642-61457661 None:intergenic 45.0%
!! AGGCTTGTTGCCTTCAACTT+AGG - Chr1:61460715-61460734 MsG0180003382.01.T01:intron 45.0%
!! GAACGGGTTGATCTTGGTAT+TGG - Chr1:61463226-61463245 MsG0180003382.01.T01:intron 45.0%
!! GATTTGGAACGGGTTGATCT+TGG - Chr1:61463220-61463239 MsG0180003382.01.T01:intron 45.0%
!! GTAGCTGGCTTGTCATTAAC+TGG + Chr1:61464873-61464892 None:intergenic 45.0%
!!! AGCTGTTTTGGCAGATGTTG+GGG + Chr1:61464118-61464137 None:intergenic 45.0%
!!! AAAATATAACTTATTATTTT+TGG - Chr1:61465406-61465425 MsG0180003382.01.T01:intron 5.0%
!!! AAATATAACTTATTATTTTT+GGG - Chr1:61465407-61465426 MsG0180003382.01.T01:intron 5.0%
!!! TATAAATATGTTTTAAAAAA+GGG - Chr1:61459224-61459243 MsG0180003382.01.T01:intron 5.0%
!!! TTATAAATATGTTTTAAAAA+AGG - Chr1:61459223-61459242 MsG0180003382.01.T01:intron 5.0%
AAAATGCTCTCCATGGGGGA+GGG - Chr1:61463198-61463217 MsG0180003382.01.T01:intron 50.0%
AACAACCTCCAACTCTTCCC+TGG + Chr1:61462678-61462697 None:intergenic 50.0%
ACATTCTATATGCAGGGGCC+GGG + Chr1:61458481-61458500 None:intergenic 50.0%
ACGCCAAAAGCTATGCTACG+AGG - Chr1:61466487-61466506 MsG0180003382.01.T01:intron 50.0%
ATAGTCACATGGGCATGGTC+GGG - Chr1:61460050-61460069 MsG0180003382.01.T01:intron 50.0%
CAACTTTACCAGTTGCGCCA+AGG - Chr1:61459391-61459410 MsG0180003382.01.T01:intron 50.0%
CAATGAGGTGAGGACTACTG+AGG - Chr1:61459097-61459116 MsG0180003382.01.T01:CDS 50.0%
CACATTCTATATGCAGGGGC+CGG + Chr1:61458482-61458501 None:intergenic 50.0%
CAGAAGTTCCGAGATCCTGA+TGG - Chr1:61463154-61463173 MsG0180003382.01.T01:intron 50.0%
CATGCTGGAGTTGTCTACCA+AGG + Chr1:61463504-61463523 None:intergenic 50.0%
CCACTTAGTGGCACAAGACT+TGG + Chr1:61463366-61463385 None:intergenic 50.0%
CTCAGTAGTCCTCACCTCAT+TGG + Chr1:61459099-61459118 None:intergenic 50.0%
GACACAAGTGCTTGGGAAGT+TGG - Chr1:61466733-61466752 MsG0180003382.01.T01:intron 50.0%
GACTTGAACCCGTGACCTTT+CGG - Chr1:61459357-61459376 MsG0180003382.01.T01:intron 50.0%
GCCATGAAAATGGAAGAGGC+TGG - Chr1:61457395-61457414 MsG0180003382.01.T01:CDS 50.0%
GCGTACAATACCCCAAATGG+TGG - Chr1:61461337-61461356 MsG0180003382.01.T01:intron 50.0%
GCTGCGTACAATACCCCAAA+TGG - Chr1:61461334-61461353 MsG0180003382.01.T01:intron 50.0%
GGCAAAAGCGGAACAAAAGC+GGG + Chr1:61462164-61462183 None:intergenic 50.0%
GGCGGGAGATGTACCTTTAA+TGG - Chr1:61463311-61463330 MsG0180003382.01.T01:intron 50.0%
GGTCCCAAAATGCTCTCCAT+GGG - Chr1:61463192-61463211 MsG0180003382.01.T01:intron 50.0%
GTCATGTGACTGGAAGGTCA+CGG - Chr1:61461264-61461283 MsG0180003382.01.T01:intron 50.0%
GTCCCAAAATGCTCTCCATG+GGG - Chr1:61463193-61463212 MsG0180003382.01.T01:intron 50.0%
GTGTTCATCTTTGGTCCACC+AGG + Chr1:61466761-61466780 None:intergenic 50.0%
TATGAAGCACACGCGGACAT+TGG + Chr1:61465146-61465165 None:intergenic 50.0%
TCATGTGACTGGAAGGTCAC+GGG - Chr1:61461265-61461284 MsG0180003382.01.T01:intron 50.0%
TCCCAAAATGCTCTCCATGG+GGG - Chr1:61463194-61463213 MsG0180003382.01.T01:intron 50.0%
TGAGGACTACTGAGGAGTGA+AGG - Chr1:61459105-61459124 MsG0180003382.01.T01:CDS 50.0%
! AAGGGTCTGAAACAGCTTGC+TGG - Chr1:61467907-61467926 MsG0180003382.01.T01:CDS 50.0%
! AGGGTCTGAAACAGCTTGCT+GGG - Chr1:61467908-61467927 MsG0180003382.01.T01:CDS 50.0%
! CCAAGTCTTGTGCCACTAAG+TGG - Chr1:61463363-61463382 MsG0180003382.01.T01:intron 50.0%
! CGGGCTTTAGTGGATGATTG+TGG - Chr1:61460069-61460088 MsG0180003382.01.T01:intron 50.0%
! CGTGATTTGGAGGTTGAGCA+AGG + Chr1:61463706-61463725 None:intergenic 50.0%
! CTGGAGATGTTGGTTGGAGA+AGG + Chr1:61457998-61458017 None:intergenic 50.0%
! CTTGTGCCACTAAGTGGAGA+TGG - Chr1:61463369-61463388 MsG0180003382.01.T01:intron 50.0%
!! CGGGTTGATCTTGGTATTGG+AGG - Chr1:61463229-61463248 MsG0180003382.01.T01:intron 50.0%
!! GGGGCTGTTTTGCTATGTGA+AGG + Chr1:61461196-61461215 None:intergenic 50.0%
!! TATCTCGTCGCAGAGTATCG+CGG - Chr1:61466679-61466698 MsG0180003382.01.T01:intron 50.0%
!!! TCCCCCATGGAGAGCATTTT+GGG + Chr1:61463198-61463217 None:intergenic 50.0%
AAGGTCACGGGTTCAAGTCC+TGG + Chr1:61461296-61461277 None:intergenic 55.0%
ACTGAAGCTCCCGCATATGC+AGG - Chr1:61459258-61459277 MsG0180003382.01.T01:intron 55.0%
AGGAAGGGGTCCCACCATTT+GGG + Chr1:61461351-61461370 None:intergenic 55.0%
AGTCGCGCGTTAGGCAAAAG+CGG + Chr1:61462176-61462195 None:intergenic 55.0%
ATTCTATATGCAGGGGCCGG+GGG + Chr1:61458479-61458498 None:intergenic 55.0%
CAAAATGCTCTCCATGGGGG+AGG - Chr1:61463197-61463216 MsG0180003382.01.T01:intron 55.0%
CATACGCAGAGTCCAGGAAG+GGG + Chr1:61461365-61461384 None:intergenic 55.0%
CATGGGGGAGGGATTTGGAA+CGG - Chr1:61463209-61463228 MsG0180003382.01.T01:intron 55.0%
CATTCTATATGCAGGGGCCG+GGG + Chr1:61458480-61458499 None:intergenic 55.0%
CTGAAGCTCCCGCATATGCA+GGG - Chr1:61459259-61459278 MsG0180003382.01.T01:intron 55.0%
CTTCCTGGACTCTGCGTATG+CGG - Chr1:61461365-61461384 MsG0180003382.01.T01:intron 55.0%
GAACAAAAGCGGGTCAACGC+GGG + Chr1:61462154-61462173 None:intergenic 55.0%
GCATACGCAGAGTCCAGGAA+GGG + Chr1:61461366-61461385 None:intergenic 55.0%
GGAACAAAAGCGGGTCAACG+CGG + Chr1:61462155-61462174 None:intergenic 55.0%
GGCAAAAAGCGGGTCAATGC+GGG + Chr1:61462133-61462152 None:intergenic 55.0%
GGCCACCCCAAAAATTGACG+CGG - Chr1:61461784-61461803 MsG0180003382.01.T01:intron 55.0%
GGGCAAAAAGCGGGTCAATG+CGG + Chr1:61462134-61462153 None:intergenic 55.0%
GGGTCAATGCGGGCAAAAAG+CGG + Chr1:61462123-61462142 None:intergenic 55.0%
GGGTCCCAAAATGCTCTCCA+TGG - Chr1:61463191-61463210 MsG0180003382.01.T01:intron 55.0%
GGTCAATGCGGGCAAAAAGC+GGG + Chr1:61462122-61462141 None:intergenic 55.0%
TCTGTCCAGGGAAGAGTTGG+AGG - Chr1:61462670-61462689 MsG0180003382.01.T01:intron 55.0%
TTCCTGGACTCTGCGTATGC+GGG - Chr1:61461366-61461385 MsG0180003382.01.T01:intron 55.0%
TTGGACGGCCTCCTTATCCT+AGG + Chr1:61464074-61464093 None:intergenic 55.0%
! ACAACGGCTTGTCCGGTTTG+CGG + Chr1:61459524-61459543 None:intergenic 55.0%
! ACCGCGCCGCGTCAATTTTT+GGG + Chr1:61461793-61461812 None:intergenic 55.0%
! ATGCGGGAGCTTTAGTGCAC+CGG - Chr1:61461382-61461401 MsG0180003382.01.T01:intron 55.0%
! ATGGGGGAGGGATTTGGAAC+GGG - Chr1:61463210-61463229 MsG0180003382.01.T01:intron 55.0%
! CACAAGAGGCTGTTTCCAGG+AGG + Chr1:61459357-61459338 None:intergenic 55.0%
! CTTGGGAAGTTGGTTCCTGG+TGG - Chr1:61466743-61466762 MsG0180003382.01.T01:intron 55.0%
! CTTTTGCCTAACGCGCGACT+CGG - Chr1:61462176-61462195 MsG0180003382.01.T01:intron 55.0%
! GTGCTTGGGAAGTTGGTTCC+TGG - Chr1:61466740-61466759 MsG0180003382.01.T01:intron 55.0%
! TACCGCGCCGCGTCAATTTT+TGG + Chr1:61461794-61461813 None:intergenic 55.0%
!! AGAGTATCGCGGCGAGAGAA+AGG - Chr1:61466690-61466709 MsG0180003382.01.T01:intron 55.0%
!!! CTCCCCCATGGAGAGCATTT+TGG + Chr1:61463199-61463218 None:intergenic 55.0%
AAATCCGGGGTTCGAACCCC+CGG - Chr1:61458460-61458479 MsG0180003382.01.T01:CDS 60.0%
AAGGGCGACCTTCGCAGGTT+TGG + Chr1:61464093-61464112 None:intergenic 60.0%
AATTGACGCGGCGCGGTAAG+CGG - Chr1:61461796-61461815 MsG0180003382.01.T01:intron 60.0%
AGGGGTAACCTTGGCGCAAC+TGG + Chr1:61459402-61459421 None:intergenic 60.0%
ATGCGGGAGCTTCAGTGCAC+CGG + Chr1:61459254-61459273 None:intergenic 60.0%
CAGGAAGGGGTCCCACCATT+TGG + Chr1:61461352-61461371 None:intergenic 60.0%
CATATGCAGGGTCCGGGAAG+GGG - Chr1:61459271-61459290 MsG0180003382.01.T01:intron 60.0%
CCCCAAAAATTGACGCGGCG+CGG - Chr1:61461789-61461808 MsG0180003382.01.T01:intron 60.0%
CGCATACGCAGAGTCCAGGA+AGG + Chr1:61461367-61461386 None:intergenic 60.0%
CGTTCCAAATCCCTCCCCCA+TGG + Chr1:61463211-61463230 None:intergenic 60.0%
CTCTCCATGGGGGAGGGATT+TGG - Chr1:61463204-61463223 MsG0180003382.01.T01:intron 60.0%
CTTCCCGGACCCTGCATATG+CGG + Chr1:61459271-61459290 None:intergenic 60.0%
GCATATGCAGGGTCCGGGAA+GGG - Chr1:61459270-61459289 MsG0180003382.01.T01:intron 60.0%
GCGACCTTCGCAGGTTTGGA+CGG + Chr1:61464089-61464108 None:intergenic 60.0%
GGAAGGGGTCCCACCATTTG+GGG + Chr1:61459305-61459286 None:intergenic 60.0%
GGCAAAAAGCGGGTCAACGC+GGG + Chr1:61462112-61462131 None:intergenic 60.0%
GGGCAAAAAGCGGGTCAACG+CGG + Chr1:61462113-61462132 None:intergenic 60.0%
GGGTCAACGCGGGCAAAAAG+CGG + Chr1:61462102-61462121 None:intergenic 60.0%
GGTCAACGCGGGCAAAAAGC+GGG + Chr1:61462101-61462120 None:intergenic 60.0%
GTCACGGGTTCAAGTCCTCC+TGG - Chr1:61461280-61461299 MsG0180003382.01.T01:intron 60.0%
GTGGTTTATGTCGGGCACCC+TGG - Chr1:61460844-61460863 MsG0180003382.01.T01:intron 60.0%
GTTTATGTCGGGCACCCTGG+TGG - Chr1:61460847-61460866 MsG0180003382.01.T01:intron 60.0%
TCGCGGCGAGAGAAAGGAGA+AGG - Chr1:61466696-61466715 MsG0180003382.01.T01:intron 60.0%
TTCCCGGACCCTGCATATGC+GGG + Chr1:61459270-61459289 None:intergenic 60.0%
! CAAATGGTGGGACCCCTTCC+CGG + Chr1:61461369-61461350 None:intergenic 60.0%
! CAAATGGTGGGACCCCTTCC+TGG - Chr1:61461350-61461369 MsG0180003382.01.T01:intron 60.0%
! CCGCGCCGCGTCAATTTTTG+GGG + Chr1:61461792-61461811 None:intergenic 60.0%
! GCGGGCGCTTTTACATGACG+CGG - Chr1:61461826-61461845 MsG0180003382.01.T01:intron 60.0%
! TGCGGGAGCTTTAGTGCACC+GGG - Chr1:61461383-61461402 MsG0180003382.01.T01:intron 60.0%
! TGGGCATGGTCGGGCTTTAG+TGG - Chr1:61460059-61460078 MsG0180003382.01.T01:intron 60.0%
!! CGCCGCGTCAATTTTTGGGG+TGG + Chr1:61461789-61461808 None:intergenic 60.0%
ATGTCGGGCACCCTGGTGGA+CGG - Chr1:61460851-61460870 MsG0180003382.01.T01:intron 65.0%
ATTGACGCGGCGCGGTAAGC+GGG - Chr1:61461797-61461816 MsG0180003382.01.T01:intron 65.0%
CGCATATGCAGGGTCCGGGA+AGG - Chr1:61459269-61459288 MsG0180003382.01.T01:intron 65.0%
CGGGAAGGGGTCCCACCATT+TGG - Chr1:61459284-61459303 MsG0180003382.01.T01:intron 65.0%
CTCCCGCATACGCAGAGTCC+AGG + Chr1:61461371-61461390 None:intergenic 65.0%
CTCCCGCATATGCAGGGTCC+GGG - Chr1:61459265-61459284 MsG0180003382.01.T01:intron 65.0%
GAGGCCGTCCAAACCTGCGA+AGG - Chr1:61464082-61464101 MsG0180003382.01.T01:intron 65.0%
GCTCCCGCATATGCAGGGTC+CGG - Chr1:61459264-61459283 MsG0180003382.01.T01:intron 65.0%
GGGATAAGGGCGACCTTCGC+AGG + Chr1:61464098-61464117 None:intergenic 65.0%
GGTGGTCGGGATTCGAACCC+CGG - Chr1:61464944-61464963 MsG0180003382.01.T01:intron 65.0%
GTCAAAGCGGAAACGCGGCG+CGG - Chr1:61461763-61461782 MsG0180003382.01.T01:intron 65.0%
TGCGGGAGCTTCAGTGCACC+GGG + Chr1:61459253-61459272 None:intergenic 65.0%
ACGCGACCGAGTCGCGCGTT+AGG + Chr1:61462185-61462204 None:intergenic 70.0%
CGGGATTCGAACCCCGGACC+TGG - Chr1:61464950-61464969 MsG0180003382.01.T01:intron 70.0%
GGTCTAACGCGGCGCGATCG+CGG + Chr1:61462237-61462256 None:intergenic 70.0%
! AACGCGGCGCGATCGCGGCG+CGG + Chr1:61462232-61462251 None:intergenic 80.0%
! CGCGGTAAGCGGGCGCGACG+CGG - Chr1:61461807-61461826 MsG0180003382.01.T01:intron 80.0%
! GCGGTAAGCGGGCGCGACGC+GGG - Chr1:61461808-61461827 MsG0180003382.01.T01:intron 80.0%
! GGGGCCGGGGGTTCGAACCC+CGG + Chr1:61458467-61458486 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
Chr1 gene 61457323 61467963 61457323 ID=MsG0180003382.01;Name=MsG0180003382.01
Chr1 mRNA 61457323 61467963 61457323 ID=MsG0180003382.01.T01;Parent=MsG0180003382.01;Name=MsG0180003382.01.T01;_AED=0.52;_eAED=0.52;_QI=0|0|0|0.75|1|0.75|4|0|426
Chr1 exon 61467851 61467963 61467851 ID=MsG0180003382.01.T01:exon:49634;Parent=MsG0180003382.01.T01
Chr1 exon 61466166 61466375 61466166 ID=MsG0180003382.01.T01:exon:49633;Parent=MsG0180003382.01.T01
Chr1 exon 61458418 61459159 61458418 ID=MsG0180003382.01.T01:exon:49632;Parent=MsG0180003382.01.T01
Chr1 exon 61457323 61457538 61457323 ID=MsG0180003382.01.T01:exon:49631;Parent=MsG0180003382.01.T01
Chr1 CDS 61467851 61467963 61467851 ID=MsG0180003382.01.T01:cds;Parent=MsG0180003382.01.T01
Chr1 CDS 61466166 61466375 61466166 ID=MsG0180003382.01.T01:cds;Parent=MsG0180003382.01.T01
Chr1 CDS 61458418 61459159 61458418 ID=MsG0180003382.01.T01:cds;Parent=MsG0180003382.01.T01
Chr1 CDS 61457323 61457538 61457323 ID=MsG0180003382.01.T01:cds;Parent=MsG0180003382.01.T01
Gene Sequence

>MsG0180003382.01.T01

ATGAGTCTGAAGGCGAAATTTAATTTGGGGGAATTGAAACAGTGTCGTGTGAGAAGGTTTTTGAGAAAAGAAGCCATGAAAATGGAAGAGGCTGGTGATATTGTGCTAATGGTGGTATGGAAACATGTTGTCCAGAAAGGAGATACAGTCATTGATGCGACATGTGGCAACGGTTTTGACACCTTAGCATTGCGCAATTTGGTTGCTGATGAGTCACATAATGGTTATGTGTACGCATTGGACATTCAGAAAGATGCTTTAGATAAGACTTCACTGTTACTGGAAGAATCACTTAGTTCCAATGAGGTGAGGACTACTGAGGAATTCTGTATTTTTGTTAACATGGGAGCACTTAGCACATACGTCAACTATAATTGTTACCCTTATCAACCTATTCAAACTACCAACAACTCAGAAATCACTACTTTTCAACATCATGAACAAGAACAACTTATGCAACAAAACCACCATTTTTCCTCTAACTATTTGAATGAAACTTCTCTTTTAGATGAAAGCTTCATTTTTCAAACTCCTTGTTTTTACTCAAATGAAACTTACCCTAACCCTTGTCAAGATCAACTACTTGTTGACTCCACTTTTTCTTCTCAAAATGATGGCTTTGTTTCAATGAATGAAATTTTCCCAAATGAGGAAGATTTCACCAATTACCTTACATGTCCAAAACGCCAAAAGCTATGCTACGAGGAGAAAAGAGAGGAACCACAACAAGAGCTTTTGAACTCAACCAATTTTTTTGTGGATGAGTTTATGACTAACCCTAACCCTAACCCTTTTGCTTCCTTTGAGGTAGAACCCTTTGCTGCTTCAAAAATTGTTGATGTTGTTCAATGTGAGAAGAAAGTTGGTGAAAGGACTATCTCGTCGCAGAGTATCGCGGCGAGAGAAAGGAGAAGGAAGATAACTGAGAAGACACAAGTGCTTGGGAAGTTGGTTCCTGGTGGACCAAAGATGAACACAGCAGAGATGCTTAATGCTGCTGCTAATTATGTCAAGTTTCTTCAAGCTCAAGTTGGAATGCTTCAACTTATGGAAACATTTAACAAGGAAAAAAAGGAACCTCCTCCAAGTGAAGATCTACACAAACTACTTCTTTCTCCATTTGTTCAAGAGAAACTGTGTTCAGAAGAAAAGTGCTTTGTTCCAAAAGAGTTTGTCACCACATTGAGCAATCATAATAATGTTCAATCAAAACCTACCATTCTTAAGGGTCTGAAACAGCTTGCTGGGACTGAGATTGAGAAGAAACCAAAGCAAGAATAG
Protein sequence

>MsG0180003382.01.T01

MSLKAKFNLGELKQCRVRRFLRKEAMKMEEAGDIVLMVVWKHVVQKGDTVIDATCGNGFDTLALRNLVADESHNGYVYALDIQKDALDKTSLLLEESLSSNEVRTTEEFCIFVNMGALSTYVNYNCYPYQPIQTTNNSEITTFQHHEQEQLMQQNHHFSSNYLNETSLLDESFIFQTPCFYSNETYPNPCQDQLLVDSTFSSQNDGFVSMNEIFPNEEDFTNYLTCPKRQKLCYEEKREEPQQELLNSTNFFVDEFMTNPNPNPFASFEVEPFAASKIVDVVQCEKKVGERTISSQSIAARERRRKITEKTQVLGKLVPGGPKMNTAEMLNAAANYVKFLQAQVGMLQLMETFNKEKKEPPPSEDLHKLLLSPFVQEKLCSEEKCFVPKEFVTTLSNHNNVQSKPTILKGLKQLAGTEIEKKPKQE*