AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880043913.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880043913.01.T01 MTR_8g044030 95.724 421 12 1 22 436 1 421 0.0 821
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880043913.01.T01 AT5G59500 58.413 416 152 6 22 436 1 396 9.99e-167 474
MsG0880043913.01.T01 AT5G59500 72.569 288 79 0 149 436 8 295 2.41e-163 462

Find 92 sgRNAs with CRISPR-Local

Find 114 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTATAGTGCTTGCAGTTTA+TGG 0.126547 8:+32481987 MsG0880043913.01.T01:CDS
GGCAAGTTCACATCCCATTT+TGG 0.141939 8:-32482236 None:intergenic
CCAACTTCTGTTGTGCAATT+TGG 0.154490 8:+32482452 MsG0880043913.01.T01:CDS
CTCGCCGTCATGACCCAAAA+TGG 0.232595 8:+32482222 MsG0880043913.01.T01:CDS
CTTAACTTTGCTTGCATATT+CGG 0.243735 8:-32482657 None:intergenic
TTAGCTGGACTTGGATTTAC+TGG 0.258205 8:+32481952 MsG0880043913.01.T01:CDS
TTCATTGGAAATTGAGCATT+TGG 0.258403 8:-32481697 None:intergenic
TACTTAAACAAACAACAAAA+AGG 0.259298 8:+32481655 MsG0880043913.01.T01:CDS
CATTGGCTTGCAGCATTTGA+AGG 0.262632 8:+32482302 MsG0880043913.01.T01:CDS
TGCTCTTAAATCCTTTCTTC+TGG 0.262743 8:+32481922 MsG0880043913.01.T01:CDS
TTTATGGGTTATACTGCTTT+TGG 0.267587 8:+32482003 MsG0880043913.01.T01:CDS
CTATAGTGCTTGCAGTTTAT+GGG 0.288964 8:+32481988 MsG0880043913.01.T01:CDS
AGAATCTATGCTGGCTTCAT+TGG 0.292712 8:-32481712 None:intergenic
GCTTTAATGGTCGAGACTTT+TGG 0.308835 8:+32482623 MsG0880043913.01.T01:CDS
GAGACAGACTAATAAATAAA+AGG 0.320697 8:-32482692 None:intergenic
GATGGAGCAATCTTGGAATC+TGG 0.331382 8:+32482351 MsG0880043913.01.T01:CDS
AGCTATGGAGGAGGCTTTAA+TGG 0.336552 8:+32482610 MsG0880043913.01.T01:CDS
GGCAAACATATTTGAGCAAT+TGG 0.343810 8:+32482043 MsG0880043913.01.T01:CDS
GGATGTATGTTAGCTGGACT+TGG 0.353195 8:+32481943 MsG0880043913.01.T01:CDS
CCAGGTGGATGGAGCAATCT+TGG 0.354991 8:+32482344 MsG0880043913.01.T01:CDS
CTACCTTGAAGGCTGGCCTT+TGG 0.382262 8:+32482124 MsG0880043913.01.T01:CDS
TCTTCTGGATGTATGTTAGC+TGG 0.387873 8:+32481937 MsG0880043913.01.T01:CDS
AGTGTCCGGAACCGGTTATA+TGG 0.389277 8:+32482188 MsG0880043913.01.T01:CDS
TTCAGTGCAGGAATCATGAT+TGG 0.409000 8:+32482278 MsG0880043913.01.T01:CDS
TTGGAAACACTTGCTTGGTC+AGG 0.410886 8:+32482022 MsG0880043913.01.T01:CDS
AAACCAAAGGCCAGCCTTCA+AGG 0.411112 8:-32482127 None:intergenic
AACTAACACGCTTAGGTCTT+GGG 0.412113 8:-32481593 None:intergenic
AATCTCCATATAACCGGTTC+CGG 0.414018 8:-32482193 None:intergenic
AAACTAACACGCTTAGGTCT+TGG 0.420283 8:-32481594 None:intergenic
GTTCCACCAGCTTATTTCAA+TGG 0.424534 8:+32482101 MsG0880043913.01.T01:CDS
CATAATAATCTCCATATAAC+CGG 0.427250 8:-32482199 None:intergenic
TCAACGTTAGTGTCCGGAAC+CGG 0.428166 8:+32482180 MsG0880043913.01.T01:CDS
TATTTCAATGGCTACCTTGA+AGG 0.429721 8:+32482113 MsG0880043913.01.T01:CDS
GTCAACTTCACAACATCAAT+TGG 0.433542 8:-32481852 None:intergenic
AATTGAAAACTAACACGCTT+AGG 0.440837 8:-32481600 None:intergenic
TCATAACTACAGCCACGAAA+TGG 0.452132 8:+32481889 MsG0880043913.01.T01:CDS
GAAATTGAGCATTTGGGAAG+AGG 0.452427 8:-32481690 None:intergenic
GATTTACTGGCCATGGTTGG+TGG 0.460830 8:+32481965 MsG0880043913.01.T01:CDS
TGAAATAAGCTGGTGGAACA+AGG 0.470249 8:-32482097 None:intergenic
CCAAATTGCACAACAGAAGT+TGG 0.474890 8:-32482452 None:intergenic
TTTCAATTGAATCACAGCTA+TGG 0.478964 8:+32481615 MsG0880043913.01.T01:CDS
TGATTCCTGCACTGAACAAA+AGG 0.485115 8:-32482271 None:intergenic
ATGGAGCAATCTTGGAATCT+GGG 0.486036 8:+32482352 MsG0880043913.01.T01:CDS
CATATTAATAGTCCATTTCG+TGG 0.492673 8:-32481901 None:intergenic
TCAATGGCTACCTTGAAGGC+TGG 0.494973 8:+32482117 MsG0880043913.01.T01:CDS
GGACTTGGATTTACTGGCCA+TGG 0.496989 8:+32481958 MsG0880043913.01.T01:CDS
GCATGAAATTGTTTGTTGAA+AGG 0.497147 8:-32481540 None:intergenic
GATTGCATTGGTTCTCCTGT+GGG 0.497265 8:+32481299 MsG0880043913.01.T01:CDS
AGCGTCGTTGATGAATAAAT+CGG 0.502555 8:-32482497 None:intergenic
CACAGGAGAACCAATGCAAT+CGG 0.503432 8:-32481297 None:intergenic
TTGCATATTCGGTGTAACTC+TGG 0.504624 8:-32482646 None:intergenic
TTGGATTTACTGGCCATGGT+TGG 0.506088 8:+32481962 MsG0880043913.01.T01:CDS
CTTCAAATGCTGCAAGCCAA+TGG 0.507717 8:-32482301 None:intergenic
TCATTGGAAATTGAGCATTT+GGG 0.508386 8:-32481696 None:intergenic
TTATAATGAAGCAGCAGAGT+TGG 0.511702 8:-32482386 None:intergenic
ATTGATGTTGTGAAGTTGAC+GGG 0.515309 8:+32481855 MsG0880043913.01.T01:CDS
ATTGGCTTGCAGCATTTGAA+GGG 0.518012 8:+32482303 MsG0880043913.01.T01:CDS
CAGGAATCATGATTGGCCAT+TGG 0.524443 8:+32482285 MsG0880043913.01.T01:CDS
TCGCCGTCATGACCCAAAAT+GGG 0.524963 8:+32482223 MsG0880043913.01.T01:CDS
CTAACATACATCCAGAAGAA+AGG 0.530527 8:-32481933 None:intergenic
GGATGGCGCAACAAGCGATA+AGG 0.531266 8:-32482476 None:intergenic
CCTGGTGCAAGGTTAAGCTC+TGG 0.531949 8:-32482326 None:intergenic
CGATTGCATTGGTTCTCCTG+TGG 0.532002 8:+32481298 MsG0880043913.01.T01:CDS
TTATACATGTCCGATTGCAT+TGG 0.532149 8:+32481287 None:intergenic
TTCAACAAACAATTTCATGC+TGG 0.532421 8:+32481543 MsG0880043913.01.T01:CDS
CTCACAATAGAGAAACCAAA+AGG 0.537134 8:-32481498 None:intergenic
AGGTAGCCATTGAAATAAGC+TGG 0.540582 8:-32482107 None:intergenic
TGGATTACTAGAATCTATGC+TGG 0.542861 8:-32481721 None:intergenic
TTATAAGCAGAAAGCAGCTA+TGG 0.543006 8:+32482595 MsG0880043913.01.T01:CDS
TACAATGAATAACAAACTCA+AGG 0.548656 8:-32482555 None:intergenic
GAACAAAAGGCGAGACCACA+TGG 0.550227 8:-32482258 None:intergenic
TGCTCCATCCACCTGGTGCA+AGG 0.551923 8:-32482337 None:intergenic
CCAAGATTGCTCCATCCACC+TGG 0.554362 8:-32482344 None:intergenic
CCAGAGCTTAACCTTGCACC+AGG 0.563895 8:+32482326 MsG0880043913.01.T01:CDS
TTAACCTTGCACCAGGTGGA+TGG 0.576435 8:+32482333 MsG0880043913.01.T01:CDS
TGTTGTTTGTTTAAGTAACG+AGG 0.577958 8:-32481649 None:intergenic
AATTGATGTTGTGAAGTTGA+CGG 0.587330 8:+32481854 MsG0880043913.01.T01:CDS
TTTCGTGGCTGTAGTTATGA+CGG 0.589274 8:-32481886 None:intergenic
TAAGCAGAAAGCAGCTATGG+AGG 0.590622 8:+32482598 MsG0880043913.01.T01:CDS
GCAGAAAGCAGCTATGGAGG+AGG 0.602669 8:+32482601 MsG0880043913.01.T01:CDS
GAGTTTGTTATTCATTGTAG+CGG 0.608374 8:+32482559 MsG0880043913.01.T01:CDS
ACAATGAATAACAAACTCAA+GGG 0.628768 8:-32482554 None:intergenic
GAAATAAGCTGGTGGAACAA+GGG 0.631852 8:-32482096 None:intergenic
GAGCTTAACCTTGCACCAGG+TGG 0.641242 8:+32482329 MsG0880043913.01.T01:CDS
TAGCCATTGAAATAAGCTGG+TGG 0.655130 8:-32482104 None:intergenic
TCGTTGATGAATAAATCGGA+TGG 0.655358 8:-32482493 None:intergenic
AGCACTATAGCCACCAACCA+TGG 0.669845 8:-32481975 None:intergenic
TAACACGCTTAGGTCTTGGG+TGG 0.680734 8:-32481590 None:intergenic
GGGATGTGAACTTGCCCATG+TGG 0.690270 8:+32482243 MsG0880043913.01.T01:CDS
AACAAAAGGCGAGACCACAT+GGG 0.690915 8:-32482257 None:intergenic
GTACTTAGCAAGATACAATG+TGG 0.695449 8:-32482411 None:intergenic
TTGATGTTGTGAAGTTGACG+GGG 0.752016 8:+32481856 MsG0880043913.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACTTAAACAAACAACAAAAA+GGG + Chr8:32481656-32481675 MsG0880043913.01.T01:CDS 20.0%
!! TACTTAAACAAACAACAAAA+AGG + Chr8:32481655-32481674 MsG0880043913.01.T01:CDS 20.0%
!! TATACAAAAAAGAAAACCAA+AGG - Chr8:32482143-32482162 None:intergenic 20.0%
! ACAATGAATAACAAACTCAA+GGG - Chr8:32482557-32482576 None:intergenic 25.0%
! CATAATAATCTCCATATAAC+CGG - Chr8:32482202-32482221 None:intergenic 25.0%
! TACAATGAATAACAAACTCA+AGG - Chr8:32482558-32482577 None:intergenic 25.0%
!!! TTTTTGAAGTACTTTAGAAC+TGG - Chr8:32481744-32481763 None:intergenic 25.0%
AATTGAAAACTAACACGCTT+AGG - Chr8:32481603-32481622 None:intergenic 30.0%
AATTGATGTTGTGAAGTTGA+CGG + Chr8:32481854-32481873 MsG0880043913.01.T01:CDS 30.0%
ATTACATAAAACTTTGCCAC+TGG - Chr8:32481423-32481442 None:intergenic 30.0%
CATATTAATAGTCCATTTCG+TGG - Chr8:32481904-32481923 None:intergenic 30.0%
CTTAACTTTGCTTGCATATT+CGG - Chr8:32482660-32482679 None:intergenic 30.0%
GTTTAAGTAACGAGGAAAAA+TGG - Chr8:32481644-32481663 None:intergenic 30.0%
TAAGTACTCAGAAAAAGTAG+TGG + Chr8:32482427-32482446 MsG0880043913.01.T01:CDS 30.0%
TCATTGGAAATTGAGCATTT+GGG - Chr8:32481699-32481718 None:intergenic 30.0%
TTCAACAAACAATTTCATGC+TGG + Chr8:32481543-32481562 MsG0880043913.01.T01:CDS 30.0%
TTCATTGGAAATTGAGCATT+TGG - Chr8:32481700-32481719 None:intergenic 30.0%
TTTCAATTGAATCACAGCTA+TGG + Chr8:32481615-32481634 MsG0880043913.01.T01:CDS 30.0%
! AATTTTGTCTCAAACAGTGA+TGG + Chr8:32481440-32481459 MsG0880043913.01.T01:CDS 30.0%
! GCATGAAATTGTTTGTTGAA+AGG - Chr8:32481543-32481562 None:intergenic 30.0%
! TGTTGTTTGTTTAAGTAACG+AGG - Chr8:32481652-32481671 None:intergenic 30.0%
!! GAGTTTGTTATTCATTGTAG+CGG + Chr8:32482559-32482578 MsG0880043913.01.T01:CDS 30.0%
!! TTTATGGGTTATACTGCTTT+TGG + Chr8:32482003-32482022 MsG0880043913.01.T01:CDS 30.0%
AAGATGCACCAAGTGATATA+AGG - Chr8:32481378-32481397 None:intergenic 35.0%
ATTGATGTTGTGAAGTTGAC+GGG + Chr8:32481855-32481874 MsG0880043913.01.T01:CDS 35.0%
CTAACATACATCCAGAAGAA+AGG - Chr8:32481936-32481955 None:intergenic 35.0%
CTATAGTGCTTGCAGTTTAT+GGG + Chr8:32481988-32482007 MsG0880043913.01.T01:CDS 35.0%
CTCACAATAGAGAAACCAAA+AGG - Chr8:32481501-32481520 None:intergenic 35.0%
GGCAAACATATTTGAGCAAT+TGG + Chr8:32482043-32482062 MsG0880043913.01.T01:CDS 35.0%
GTACTTAGCAAGATACAATG+TGG - Chr8:32482414-32482433 None:intergenic 35.0%
GTCAACTTCACAACATCAAT+TGG - Chr8:32481855-32481874 None:intergenic 35.0%
TATTTCAATGGCTACCTTGA+AGG + Chr8:32482113-32482132 MsG0880043913.01.T01:CDS 35.0%
TGCTCTTAAATCCTTTCTTC+TGG + Chr8:32481922-32481941 MsG0880043913.01.T01:CDS 35.0%
TGGATTACTAGAATCTATGC+TGG - Chr8:32481724-32481743 None:intergenic 35.0%
TTATAAGCAGAAAGCAGCTA+TGG + Chr8:32482595-32482614 MsG0880043913.01.T01:CDS 35.0%
TTATAATGAAGCAGCAGAGT+TGG - Chr8:32482389-32482408 None:intergenic 35.0%
! AGCGTCGTTGATGAATAAAT+CGG - Chr8:32482500-32482519 None:intergenic 35.0%
! CACTCAAAAACTGTACCTTT+TGG + Chr8:32481483-32481502 MsG0880043913.01.T01:CDS 35.0%
! GATATGAGCCTTATATCACT+TGG + Chr8:32481367-32481386 MsG0880043913.01.T01:intron 35.0%
! TCGTCACATCAACTTTTACA+TGG + Chr8:32482069-32482088 MsG0880043913.01.T01:CDS 35.0%
! TCGTTGATGAATAAATCGGA+TGG - Chr8:32482496-32482515 None:intergenic 35.0%
! TTTTCTTCAACGTTAGTGTC+CGG + Chr8:32482174-32482193 MsG0880043913.01.T01:CDS 35.0%
!! TATATCACTTGGTGCATCTT+TGG + Chr8:32481378-32481397 MsG0880043913.01.T01:intron 35.0%
AAACTAACACGCTTAGGTCT+TGG - Chr8:32481597-32481616 None:intergenic 40.0%
AACTAACACGCTTAGGTCTT+GGG - Chr8:32481596-32481615 None:intergenic 40.0%
AATTGATAGATCCAACCCAC+AGG - Chr8:32481317-32481336 None:intergenic 40.0%
AGGTAGCCATTGAAATAAGC+TGG - Chr8:32482110-32482129 None:intergenic 40.0%
ATGGAGCAATCTTGGAATCT+GGG + Chr8:32482352-32482371 MsG0880043913.01.T01:CDS 40.0%
CCAAATTGCACAACAGAAGT+TGG - Chr8:32482455-32482474 None:intergenic 40.0%
CCAACTTCTGTTGTGCAATT+TGG + Chr8:32482452-32482471 MsG0880043913.01.T01:CDS 40.0%
GAAATAAGCTGGTGGAACAA+GGG - Chr8:32482099-32482118 None:intergenic 40.0%
GAAATTGAGCATTTGGGAAG+AGG - Chr8:32481693-32481712 None:intergenic 40.0%
GCTATAGTGCTTGCAGTTTA+TGG + Chr8:32481987-32482006 MsG0880043913.01.T01:CDS 40.0%
GTTCCACCAGCTTATTTCAA+TGG + Chr8:32482101-32482120 MsG0880043913.01.T01:CDS 40.0%
TAGCCATTGAAATAAGCTGG+TGG - Chr8:32482107-32482126 None:intergenic 40.0%
TCATAACTACAGCCACGAAA+TGG + Chr8:32481889-32481908 MsG0880043913.01.T01:CDS 40.0%
TCTTCTGGATGTATGTTAGC+TGG + Chr8:32481937-32481956 MsG0880043913.01.T01:CDS 40.0%
TGAAATAAGCTGGTGGAACA+AGG - Chr8:32482100-32482119 None:intergenic 40.0%
TGATTCCTGCACTGAACAAA+AGG - Chr8:32482274-32482293 None:intergenic 40.0%
TTAACGAGTAACTCAACGTG+TGG + Chr8:32481341-32481360 MsG0880043913.01.T01:intron 40.0%
TTAGCTGGACTTGGATTTAC+TGG + Chr8:32481952-32481971 MsG0880043913.01.T01:CDS 40.0%
TTCAGTGCAGGAATCATGAT+TGG + Chr8:32482278-32482297 MsG0880043913.01.T01:CDS 40.0%
TTGATGTTGTGAAGTTGACG+GGG + Chr8:32481856-32481875 MsG0880043913.01.T01:CDS 40.0%
TTTCGTGGCTGTAGTTATGA+CGG - Chr8:32481889-32481908 None:intergenic 40.0%
! AATCTCCATATAACCGGTTC+CGG - Chr8:32482196-32482215 None:intergenic 40.0%
! GCAAGTTCACATCCCATTTT+GGG - Chr8:32482238-32482257 None:intergenic 40.0%
! GCTTTAATGGTCGAGACTTT+TGG + Chr8:32482623-32482642 MsG0880043913.01.T01:CDS 40.0%
!! AGAATCTATGCTGGCTTCAT+TGG - Chr8:32481715-32481734 None:intergenic 40.0%
!! ATTGGCTTGCAGCATTTGAA+GGG + Chr8:32482303-32482322 MsG0880043913.01.T01:CDS 40.0%
!! TGCTTTTGGAAACACTTGCT+TGG + Chr8:32482017-32482036 MsG0880043913.01.T01:CDS 40.0%
!! TTGCATATTCGGTGTAACTC+TGG - Chr8:32482649-32482668 None:intergenic 40.0%
!! TTGGCTTTGTGATTTACCTG+TGG + Chr8:32481397-32481416 MsG0880043913.01.T01:intron 40.0%
AACAAAAGGCGAGACCACAT+GGG - Chr8:32482260-32482279 None:intergenic 45.0%
CACAGGAGAACCAATGCAAT+CGG - Chr8:32481300-32481319 None:intergenic 45.0%
CTTCAAATGCTGCAAGCCAA+TGG - Chr8:32482304-32482323 None:intergenic 45.0%
GATGGAGCAATCTTGGAATC+TGG + Chr8:32482351-32482370 MsG0880043913.01.T01:CDS 45.0%
GGATGTATGTTAGCTGGACT+TGG + Chr8:32481943-32481962 MsG0880043913.01.T01:CDS 45.0%
TAAGCAGAAAGCAGCTATGG+AGG + Chr8:32482598-32482617 MsG0880043913.01.T01:CDS 45.0%
TTGGAAACACTTGCTTGGTC+AGG + Chr8:32482022-32482041 MsG0880043913.01.T01:CDS 45.0%
TTGGATTTACTGGCCATGGT+TGG + Chr8:32481962-32481981 MsG0880043913.01.T01:CDS 45.0%
! AGCTATGGAGGAGGCTTTAA+TGG + Chr8:32482610-32482629 MsG0880043913.01.T01:CDS 45.0%
! CAGGAATCATGATTGGCCAT+TGG + Chr8:32482285-32482304 MsG0880043913.01.T01:CDS 45.0%
! GGCAAGTTCACATCCCATTT+TGG - Chr8:32482239-32482258 None:intergenic 45.0%
!! CATCCCATTTTGGGTCATGA+CGG - Chr8:32482229-32482248 None:intergenic 45.0%
!! CATTGGCTTGCAGCATTTGA+AGG + Chr8:32482302-32482321 MsG0880043913.01.T01:CDS 45.0%
!! GATTGCATTGGTTCTCCTGT+GGG + Chr8:32481299-32481318 MsG0880043913.01.T01:CDS 45.0%
AAAACTTTGCCACTGGCCAC+AGG - Chr8:32481416-32481435 None:intergenic 50.0%
AAACCAAAGGCCAGCCTTCA+AGG - Chr8:32482130-32482149 None:intergenic 50.0%
AGCACTATAGCCACCAACCA+TGG - Chr8:32481978-32481997 None:intergenic 50.0%
AGTGTCCGGAACCGGTTATA+TGG + Chr8:32482188-32482207 MsG0880043913.01.T01:CDS 50.0%
CGAGTAACTCAACGTGTGGA+AGG + Chr8:32481345-32481364 MsG0880043913.01.T01:intron 50.0%
GAACAAAAGGCGAGACCACA+TGG - Chr8:32482261-32482280 None:intergenic 50.0%
GATTTACTGGCCATGGTTGG+TGG + Chr8:32481965-32481984 MsG0880043913.01.T01:CDS 50.0%
GGACTTGGATTTACTGGCCA+TGG + Chr8:32481958-32481977 MsG0880043913.01.T01:CDS 50.0%
TAACACGCTTAGGTCTTGGG+TGG - Chr8:32481593-32481612 None:intergenic 50.0%
TCAACGTTAGTGTCCGGAAC+CGG + Chr8:32482180-32482199 MsG0880043913.01.T01:CDS 50.0%
TCAATGGCTACCTTGAAGGC+TGG + Chr8:32482117-32482136 MsG0880043913.01.T01:CDS 50.0%
TCGCCGTCATGACCCAAAAT+GGG + Chr8:32482223-32482242 MsG0880043913.01.T01:CDS 50.0%
TGTGATTTACCTGTGGCCAG+TGG + Chr8:32481404-32481423 MsG0880043913.01.T01:intron 50.0%
TTAACCTTGCACCAGGTGGA+TGG + Chr8:32482333-32482352 MsG0880043913.01.T01:CDS 50.0%
! TCTCGCCTTTTGTTCAGTGC+AGG + Chr8:32482266-32482285 MsG0880043913.01.T01:CDS 50.0%
!! CGATTGCATTGGTTCTCCTG+TGG + Chr8:32481298-32481317 MsG0880043913.01.T01:CDS 50.0%
CCAAGATTGCTCCATCCACC+TGG - Chr8:32482347-32482366 None:intergenic 55.0%
CCAGAGCTTAACCTTGCACC+AGG + Chr8:32482326-32482345 MsG0880043913.01.T01:CDS 55.0%
CCAGGTGGATGGAGCAATCT+TGG + Chr8:32482344-32482363 MsG0880043913.01.T01:CDS 55.0%
CCTGGTGCAAGGTTAAGCTC+TGG - Chr8:32482329-32482348 None:intergenic 55.0%
CTCGCCGTCATGACCCAAAA+TGG + Chr8:32482222-32482241 MsG0880043913.01.T01:CDS 55.0%
GAGCTTAACCTTGCACCAGG+TGG + Chr8:32482329-32482348 MsG0880043913.01.T01:CDS 55.0%
GCAGAAAGCAGCTATGGAGG+AGG + Chr8:32482601-32482620 MsG0880043913.01.T01:CDS 55.0%
GGATGGCGCAACAAGCGATA+AGG - Chr8:32482479-32482498 None:intergenic 55.0%
GGGATGTGAACTTGCCCATG+TGG + Chr8:32482243-32482262 MsG0880043913.01.T01:CDS 55.0%
!! CTACCTTGAAGGCTGGCCTT+TGG + Chr8:32482124-32482143 MsG0880043913.01.T01:CDS 55.0%
!! GCATTGGTTCTCCTGTGGGT+TGG + Chr8:32481303-32481322 MsG0880043913.01.T01:intron 55.0%
TGCTCCATCCACCTGGTGCA+AGG - Chr8:32482340-32482359 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr8 gene 32481293 32482706 32481293 ID=MsG0880043913.01;Name=MsG0880043913.01
Chr8 mRNA 32481293 32482706 32481293 ID=MsG0880043913.01.T01;Parent=MsG0880043913.01;Name=MsG0880043913.01.T01;_AED=0.48;_eAED=0.50;_QI=0|0|0|1|1|1|2|0|436
Chr8 exon 32481293 32481320 32481293 ID=MsG0880043913.01.T01:exon:7946;Parent=MsG0880043913.01.T01
Chr8 exon 32481424 32482706 32481424 ID=MsG0880043913.01.T01:exon:7947;Parent=MsG0880043913.01.T01
Chr8 CDS 32481293 32481320 32481293 ID=MsG0880043913.01.T01:cds;Parent=MsG0880043913.01.T01
Chr8 CDS 32481424 32482706 32481424 ID=MsG0880043913.01.T01:cds;Parent=MsG0880043913.01.T01
Gene Sequence

>MsG0880043913.01.T01

ATGTCCGATTGCATTGGTTCTCCTGTGGTGGCAAAGTTTTATGTAATTTTGTCTCAAACAGTGATGGAAGCAGTAAAAGTTCTTTCACACTCAAAAACTGTACCTTTTGGTTTCTCTATTGTGAGCAACAACGTCTCTCTGAGACCTTTCAACAAACAATTTCATGCTGGTGTAGTTAATAACAGTAATCAACTCCACCCAAGACCTAAGCGTGTTAGTTTTCAATTGAATCACAGCTATGGAAACCATTTTTCCTCGTTACTTAAACAAACAACAAAAAGGGCTGATTTGTTACCTCTTCCCAAATGCTCAATTTCCAATGAAGCCAGCATAGATTCTAGTAATCCAGTTCTAAAGTACTTCAAAAATATATCTTTTGATTCTAGTAATCCAGTTCTAAAGTACTTCAAAAATATATCATTTGATTCGATAAAAGATATTGCTCTGCAGTTGACTCCAATTGATGTTGTGAAGTTGACGGGGATAATATCCGTCATAACTACAGCCACGAAATGGACTATTAATATGCTCTTAAATCCTTTCTTCTGGATGTATGTTAGCTGGACTTGGATTTACTGGCCATGGTTGGTGGCTATAGTGCTTGCAGTTTATGGGTTATACTGCTTTTGGAAACACTTGCTTGGTCAGGCAAACATATTTGAGCAATTGGTGATCGTCACATCAACTTTTACATGGCTCACCCTTGTTCCACCAGCTTATTTCAATGGCTACCTTGAAGGCTGGCCTTTGGTTTTCTTTTTTGTATATCATTACTTCTTTTTCTTCAACGTTAGTGTCCGGAACCGGTTATATGGAGATTATTATGCTCGCCGTCATGACCCAAAATGGGATGTGAACTTGCCCATGTGGTCTCGCCTTTTGTTCAGTGCAGGAATCATGATTGGCCATTGGCTTGCAGCATTTGAAGGGCCAGAGCTTAACCTTGCACCAGGTGGATGGAGCAATCTTGGAATCTGGGCTTTGATTATTCCAACTCTGCTGCTTCATTATAATTCCACATTGTATCTTGCTAAGTACTCAGAAAAAGTAGTGGTTCCAACTTCTGTTGTGCAATTTGGACCTTATCGCTTGTTGCGCCATCCGATTTATTCATCAACGACGCTATTGTTTGTGACATATTGTGTTGCGCTTCGAGCACCCTTGAGTTTGTTATTCATTGTAGCGGTTTGTTTGTTGTATTATAAGCAGAAAGCAGCTATGGAGGAGGCTTTAATGGTCGAGACTTTTGGCCAGAGTTACACCGAATATGCAAGCAAAGTTAAGTACAAGTTTGTTCCTTTTATTTATTAG

Protein sequence

>MsG0880043913.01.T01

MSDCIGSPVVAKFYVILSQTVMEAVKVLSHSKTVPFGFSIVSNNVSLRPFNKQFHAGVVNNSNQLHPRPKRVSFQLNHSYGNHFSSLLKQTTKRADLLPLPKCSISNEASIDSSNPVLKYFKNISFDSSNPVLKYFKNISFDSIKDIALQLTPIDVVKLTGIISVITTATKWTINMLLNPFFWMYVSWTWIYWPWLVAIVLAVYGLYCFWKHLLGQANIFEQLVIVTSTFTWLTLVPPAYFNGYLEGWPLVFFFVYHYFFFFNVSVRNRLYGDYYARRHDPKWDVNLPMWSRLLFSAGIMIGHWLAAFEGPELNLAPGGWSNLGIWALIIPTLLLHYNSTLYLAKYSEKVVVPTSVVQFGPYRLLRHPIYSSTTLLFVTYCVALRAPLSLLFIVAVCLLYYKQKAAMEEALMVETFGQSYTEYASKVKYKFVPFIY*