AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180003441.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180003441.01.T01 MTR_1g061800 96.393 610 15 2 1 608 1 605 0.0 1214
MsG0180003441.01.T01 MTR_8g098460 29.677 310 199 5 118 417 24 324 8.13e-36 137
MsG0180003441.01.T01 MTR_7g103510 29.545 308 202 6 118 417 18 318 5.79e-32 126
MsG0180003441.01.T01 MTR_0681s0020 31.879 298 188 7 124 416 28 315 3.53e-21 99.4
MsG0180003441.01.T01 MTR_1g056740 28.931 159 112 1 127 285 29 186 7.00e-18 82.8
MsG0180003441.01.T01 MTR_4g087510 29.319 191 113 6 142 317 72 255 6.04e-11 64.7
MsG0180003441.01.T02 MTR_1g061800 96.393 610 15 2 1 608 1 605 0.0 1214
MsG0180003441.01.T02 MTR_8g098460 29.677 310 199 5 118 417 24 324 8.13e-36 137
MsG0180003441.01.T02 MTR_7g103510 29.545 308 202 6 118 417 18 318 5.79e-32 126
MsG0180003441.01.T02 MTR_0681s0020 31.879 298 188 7 124 416 28 315 3.53e-21 99.4
MsG0180003441.01.T02 MTR_1g056740 28.931 159 112 1 127 285 29 186 7.00e-18 82.8
MsG0180003441.01.T02 MTR_4g087510 29.319 191 113 6 142 317 72 255 6.04e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180003441.01.T01 AT3G10050 78.383 532 114 1 77 608 62 592 0.0 826
MsG0180003441.01.T01 AT4G11640 31.250 304 190 4 127 420 29 323 8.06e-32 126
MsG0180003441.01.T02 AT3G10050 78.383 532 114 1 77 608 62 592 0.0 826
MsG0180003441.01.T02 AT4G11640 31.250 304 190 4 127 420 29 323 8.06e-32 126

Find 59 sgRNAs with CRISPR-Local

Find 369 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCCGCCGGAGACTCAATAAT+TGG 0.322575 1:+62324271 None:intergenic
GACTAGTATACTTACTTCTA+AGG 0.323743 1:-62324122 MsG0180003441.01.T01:CDS
AATGGTTTGAAACGAGGGTT+AGG 0.357051 1:+62324346 None:intergenic
ATCGTAGCGCCTCCATGGTT+TGG 0.362780 1:+62324452 None:intergenic
ACAGACTTGGTGTTAATGTT+TGG 0.380123 1:-62324048 MsG0180003441.01.T01:CDS
TTGTGGCTGTGAGGTGGTGG+AGG 0.386201 1:+62324423 None:intergenic
TGTTGAATCACCTCTTGAAT+TGG 0.388453 1:-62324086 MsG0180003441.01.T01:CDS
TCGTAGCGCCTCCATGGTTT+GGG 0.392275 1:+62324453 None:intergenic
AGGTTGTGGCTGTGAGGTGG+TGG 0.410266 1:+62324420 None:intergenic
GGAACAGAAACCATTTCAAC+AGG 0.410555 1:+62324292 None:intergenic
GCGGCGGTGGTTGTTATGAA+TGG 0.423932 1:+62324328 None:intergenic
GGCGGCTCCTCCGAGGTTGA+AGG 0.426236 1:-62324251 MsG0180003441.01.T01:CDS
AGTATCAAAGCCTGTTGAAA+TGG 0.429799 1:-62324302 MsG0180003441.01.T01:CDS
CTTTGATACTGCGGCGGCGG+TGG 0.437122 1:+62324315 None:intergenic
TGGCTGTGAGGTGGTGGAGG+AGG 0.441082 1:+62324426 None:intergenic
TGTTCCAATTATTGAGTCTC+CGG 0.452886 1:-62324275 MsG0180003441.01.T01:CDS
GCATTCTGTGACGGTGGTTA+CGG 0.467805 1:+62324386 None:intergenic
CCAAGTCTGTCAGAAAGCTT+TGG 0.493609 1:+62324061 None:intergenic
CCAAAGCTTTCTGACAGACT+TGG 0.500138 1:-62324061 MsG0180003441.01.T01:CDS
GGTGGATACTGAAGTGAATC+CGG 0.500821 1:+62324223 None:intergenic
AGGCTTTGATACTGCGGCGG+CGG 0.501092 1:+62324312 None:intergenic
AATTATTGAGTCTCCGGCGG+CGG 0.501742 1:-62324269 MsG0180003441.01.T01:CDS
TCACCACCACGTGTCCTGTC+AGG 0.510048 1:+62324181 None:intergenic
AACCTCGGAGGAGCCGCCGC+CGG 0.515606 1:+62324256 None:intergenic
TCCGGCGAAACCTTCAACCT+CGG 0.516696 1:+62324241 None:intergenic
ATGGTTTGAAACGAGGGTTA+GGG 0.519460 1:+62324347 None:intergenic
ATGAGGTTGTGGCTGTGAGG+TGG 0.523810 1:+62324417 None:intergenic
GGTGGTGATGAAGGTGATTG+TGG 0.525787 1:-62324166 MsG0180003441.01.T01:CDS
ACGTTGGAGCGGTTCCTGAC+AGG 0.531537 1:-62324195 MsG0180003441.01.T01:CDS
TGTGACGGTGGTTACGGAGG+AGG 0.538450 1:+62324392 None:intergenic
TTATGAATGGTTTGAAACGA+GGG 0.543995 1:+62324341 None:intergenic
TCCGAGGTTGAAGGTTTCGC+CGG 0.547453 1:-62324242 MsG0180003441.01.T01:CDS
CGGAGGAGGAGATGAGGTTG+TGG 0.554510 1:+62324406 None:intergenic
GGAAAATCGTAGCGCCTCCA+TGG 0.570016 1:+62324447 None:intergenic
GAGATGAGGTTGTGGCTGTG+AGG 0.575781 1:+62324414 None:intergenic
CTCCGGCGGCGGCTCCTCCG+AGG 0.577523 1:-62324258 MsG0180003441.01.T01:CDS
GGAACCGCTCCAACGTAACC+AGG 0.581487 1:+62324202 None:intergenic
AGGACACGTGGTGGTGATGA+AGG 0.582103 1:-62324175 MsG0180003441.01.T01:CDS
TTCAACAGGCTTTGATACTG+CGG 0.582630 1:+62324306 None:intergenic
TGTGGTGCATTCTGTGACGG+TGG 0.586258 1:+62324380 None:intergenic
GTTATGAATGGTTTGAAACG+AGG 0.592217 1:+62324340 None:intergenic
CAGTATCCACCTGGTTACGT+TGG 0.593210 1:-62324211 MsG0180003441.01.T01:CDS
AGCTTTGGCGCCAATTCAAG+AGG 0.594505 1:+62324076 None:intergenic
TTCTGTGACGGTGGTTACGG+AGG 0.596110 1:+62324389 None:intergenic
GATTGTGGAGTAAGTGCTAT+GGG 0.606504 1:-62324151 MsG0180003441.01.T01:CDS
TGATTGTGGAGTAAGTGCTA+TGG 0.611156 1:-62324152 MsG0180003441.01.T01:CDS
TCCACCTGGTTACGTTGGAG+CGG 0.612380 1:-62324206 MsG0180003441.01.T01:CDS
AATCAAAATGACCCAAACCA+TGG 0.614626 1:-62324464 MsG0180003441.01.T01:intron
TCCAATTATTGAGTCTCCGG+CGG 0.624802 1:-62324272 MsG0180003441.01.T01:CDS
GATTCACTTCAGTATCCACC+TGG 0.627666 1:-62324220 MsG0180003441.01.T01:CDS
AACAGGCTTTGATACTGCGG+CGG 0.639007 1:+62324309 None:intergenic
TGGTTACGGAGGAGGAGATG+AGG 0.648876 1:+62324400 None:intergenic
GCGGTTCCTGACAGGACACG+TGG 0.649476 1:-62324187 MsG0180003441.01.T01:CDS
TAGTGTGGTGCATTCTGTGA+CGG 0.664443 1:+62324377 None:intergenic
GGCGAAACCTTCAACCTCGG+AGG 0.692911 1:+62324244 None:intergenic
ACCGCTCCAACGTAACCAGG+TGG 0.696827 1:+62324205 None:intergenic
CAAAATGACCCAAACCATGG+AGG 0.704518 1:-62324461 MsG0180003441.01.T01:intron
GGTTAGGGTGAAGAGTAGTG+TGG 0.726653 1:+62324362 None:intergenic
GTTCCTGACAGGACACGTGG+TGG 0.729331 1:-62324184 MsG0180003441.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGTAAAACATAATATATAAA+TGG + Chr1:62324359-62324378 None:intergenic 10.0%
!! GTAAAACATAATATATAAAT+GGG + Chr1:62324358-62324377 None:intergenic 10.0%
!! TTATAAAAATTCAAAATGAA+GGG + Chr1:62323652-62323671 None:intergenic 10.0%
!! TTTATAAAAATTCAAAATGA+AGG + Chr1:62323653-62323672 None:intergenic 10.0%
!!! ATTTATATATTATGTTTTAC+TGG - Chr1:62324358-62324377 MsG0180003441.01.T01:CDS 10.0%
!!! TATGTTTAAAATTTTGAATT+TGG - Chr1:62324407-62324426 MsG0180003441.01.T01:CDS 10.0%
!!! TTTGAAATTTTCTTTAATTA+TGG - Chr1:62324485-62324504 MsG0180003441.01.T01:intron 10.0%
!! ATAAAAATGTCTGATTAAAA+TGG - Chr1:62324457-62324476 MsG0180003441.01.T01:CDS 15.0%
!! TAAAAATGTCTGATTAAAAT+GGG - Chr1:62324458-62324477 MsG0180003441.01.T01:CDS 15.0%
!!! ATCAAAAATTGATAATAAAC+AGG + Chr1:62323337-62323356 None:intergenic 15.0%
!!! GAGTTTTCAAAAAAAAAAAA+AGG - Chr1:62322608-62322627 MsG0180003441.01.T01:intron 15.0%
!!! GTTAATTTTTTGTTTTGTTT+TGG - Chr1:62320351-62320370 MsG0180003441.01.T01:intron 15.0%
!!! GTTATTATGTTTTATACTAT+CGG - Chr1:62324383-62324402 MsG0180003441.01.T01:CDS 15.0%
!!! TATTTTATTATTCATTGTGT+TGG - Chr1:62323481-62323500 MsG0180003441.01.T01:intron 15.0%
!! AGAATTATTTAATGCTTCAT+TGG - Chr1:62322274-62322293 MsG0180003441.01.T01:intron 20.0%
!! TATTATTCATAAACTTGTCA+AGG + Chr1:62320565-62320584 None:intergenic 20.0%
!! TGGTACAATTATATGAATTT+GGG - Chr1:62322638-62322657 MsG0180003441.01.T01:intron 20.0%
!! TTTCAAAACAAAGTTAAACT+TGG + Chr1:62323888-62323907 None:intergenic 20.0%
!! TTTGTACATTAAATGGAAAT+TGG - Chr1:62322824-62322843 MsG0180003441.01.T01:CDS 20.0%
!!! AAAAAAAAATCTGGAGTTAA+CGG + Chr1:62322421-62322440 None:intergenic 20.0%
!!! AATACTGCATGTTTTTTTTT+TGG - Chr1:62324090-62324109 MsG0180003441.01.T01:CDS 20.0%
!!! ATATGTTGTTTATGAAATTG+TGG - Chr1:62320811-62320830 MsG0180003441.01.T01:intron 20.0%
!!! ATGCATTGATTGATTATTTT+AGG - Chr1:62324300-62324319 MsG0180003441.01.T01:CDS 20.0%
!!! ATTTTACTCTGTACTTTTAA+AGG - Chr1:62322666-62322685 MsG0180003441.01.T01:intron 20.0%
!!! TAATAAAATATTATTGGCCT+TGG + Chr1:62323471-62323490 None:intergenic 20.0%
!!! TTCATTGGTTTATATATACT+TGG - Chr1:62322289-62322308 MsG0180003441.01.T01:intron 20.0%
!!! TTTGAAAACATTTTTCAGAT+GGG - Chr1:62323901-62323920 MsG0180003441.01.T01:intron 20.0%
!!! TTTTGAAAACATTTTTCAGA+TGG - Chr1:62323900-62323919 MsG0180003441.01.T01:intron 20.0%
! AAAAAAAAAAAGGATGCATG+TGG - Chr1:62322618-62322637 MsG0180003441.01.T01:intron 25.0%
! AAAATAATTCCCAATTCTCA+CGG + Chr1:62322784-62322803 None:intergenic 25.0%
! AAATGTATTAGTTGGAATTC+AGG - Chr1:62324182-62324201 MsG0180003441.01.T01:CDS 25.0%
! AATTCAAAAGTTGTGTGTAT+TGG + Chr1:62320640-62320659 None:intergenic 25.0%
! AATTTGGAAAATTGTGTTGA+GGG - Chr1:62324423-62324442 MsG0180003441.01.T01:CDS 25.0%
! ACAAGACCATTAAATCAAAT+GGG + Chr1:62323801-62323820 None:intergenic 25.0%
! ACATGAATTTCGATAAACTT+AGG - Chr1:62323023-62323042 MsG0180003441.01.T01:intron 25.0%
! ACGTGTTTAGTAAACATTAT+CGG + Chr1:62323835-62323854 None:intergenic 25.0%
! CAAAAATAAGTCAATCCAAA+CGG + Chr1:62320439-62320458 None:intergenic 25.0%
! CACCAGATAAAAAAAAAATC+TGG + Chr1:62322430-62322449 None:intergenic 25.0%
! CACTTGTCATAAAAAATTAC+TGG - Chr1:62324323-62324342 MsG0180003441.01.T01:CDS 25.0%
! GTGGTACAATTATATGAATT+TGG - Chr1:62322637-62322656 MsG0180003441.01.T01:intron 25.0%
! TCTGCAAACAATAACAAATT+TGG - Chr1:62322166-62322185 MsG0180003441.01.T01:intron 25.0%
! TTAATGTACAAAACATTCGA+AGG + Chr1:62322816-62322835 None:intergenic 25.0%
! TTACACAACAGAAAAAAGTT+CGG + Chr1:62322250-62322269 None:intergenic 25.0%
! TTGTCATAAAAAATTACTGG+CGG - Chr1:62324326-62324345 MsG0180003441.01.T01:CDS 25.0%
!! AAAAAAAATCTGGAGTTAAC+GGG + Chr1:62322420-62322439 None:intergenic 25.0%
!! ACAAATTTGGAATTGATTGA+TGG - Chr1:62322179-62322198 MsG0180003441.01.T01:intron 25.0%
!! CGAATGTTTTGTACATTAAA+TGG - Chr1:62322817-62322836 MsG0180003441.01.T01:CDS 25.0%
!! GAAATTGTGAATTTTGTGAT+AGG - Chr1:62320856-62320875 MsG0180003441.01.T01:intron 25.0%
!! TTGACATTTTTAATGTTCAC+AGG - Chr1:62321639-62321658 MsG0180003441.01.T01:intron 25.0%
!!! ACTGTTATTTTTTCCAAAAC+AGG - Chr1:62323165-62323184 MsG0180003441.01.T01:intron 25.0%
!!! CTCCAGATTTTTTTTTTATC+TGG - Chr1:62322425-62322444 MsG0180003441.01.T01:CDS 25.0%
!!! CTGTTATTTTTTCCAAAACA+GGG - Chr1:62323166-62323185 MsG0180003441.01.T01:intron 25.0%
!!! TGCATTTCTTTTAGTTCTAA+GGG + Chr1:62323530-62323549 None:intergenic 25.0%
!!! TTTCAAACAGTTTTGTGAAT+TGG - Chr1:62323123-62323142 MsG0180003441.01.T01:intron 25.0%
!!! TTTTTTACCTCTCTGTATTA+TGG - Chr1:62322324-62322343 MsG0180003441.01.T01:intron 25.0%
AACAGAAAAAAGTTCGGATT+TGG + Chr1:62322244-62322263 None:intergenic 30.0%
AATAAAGAGATATTCCATCG+TGG + Chr1:62324018-62324037 None:intergenic 30.0%
AATCACAACAGGATGATTAT+AGG - Chr1:62322456-62322475 MsG0180003441.01.T01:CDS 30.0%
AATGTTATAGCAATAACCTC+CGG - Chr1:62322995-62323014 MsG0180003441.01.T01:intron 30.0%
ACTTGGTCAAATACAAAAAC+AGG + Chr1:62323871-62323890 None:intergenic 30.0%
ATAAAGCCCATAATATGAGA+CGG - Chr1:62323743-62323762 MsG0180003441.01.T01:intron 30.0%
ATCATCCTGTTGTGATTTAA+TGG + Chr1:62322453-62322472 None:intergenic 30.0%
ATTCAATATGTCTCTCATGT+CGG - Chr1:62320382-62320401 MsG0180003441.01.T01:intron 30.0%
CAAATACAGATATAGTTCCA+AGG - Chr1:62323253-62323272 MsG0180003441.01.T01:CDS 30.0%
CAAGACCATTAAATCAAATG+GGG + Chr1:62323800-62323819 None:intergenic 30.0%
CTAAATGCAAACTTTCACAA+GGG + Chr1:62321885-62321904 None:intergenic 30.0%
CTTAGAACTAAAAGAAATGC+AGG - Chr1:62323529-62323548 MsG0180003441.01.T01:intron 30.0%
GAATTTGGAAAATTGTGTTG+AGG - Chr1:62324422-62324441 MsG0180003441.01.T01:CDS 30.0%
GACAAGACCATTAAATCAAA+TGG + Chr1:62323802-62323821 None:intergenic 30.0%
GACTAGTATACTTACTTCTA+AGG - Chr1:62320141-62320160 MsG0180003441.01.T01:intron 30.0%
GATAATAAACAGGAAAGACA+CGG + Chr1:62323327-62323346 None:intergenic 30.0%
GCATTAAAAGCTTGAAGAAA+AGG + Chr1:62324284-62324303 None:intergenic 30.0%
GGGTTAAATAGCAATGTAAT+TGG + Chr1:62322400-62322419 None:intergenic 30.0%
TAAACTGTCAAGAAAGTAGA+TGG + Chr1:62322074-62322093 None:intergenic 30.0%
TAAATGAATACCTTGATGTC+AGG + Chr1:62321049-62321068 None:intergenic 30.0%
TAACTAAAACTCATCAAACG+TGG + Chr1:62321102-62321121 None:intergenic 30.0%
TAAGTGCAGAGTAATCAAAT+TGG - Chr1:62322110-62322129 MsG0180003441.01.T01:intron 30.0%
TCATGAAAAAACAGCTTATG+AGG + Chr1:62320538-62320557 None:intergenic 30.0%
TCTAAATGCAAACTTTCACA+AGG + Chr1:62321886-62321905 None:intergenic 30.0%
! AAAAATTTCATCAAAGCACC+AGG + Chr1:62323982-62324001 None:intergenic 30.0%
! AACTATGAAAAACCCTGTTT+TGG + Chr1:62323181-62323200 None:intergenic 30.0%
! AAGTTTGCATTTAGAATCTC+TGG - Chr1:62321891-62321910 MsG0180003441.01.T01:intron 30.0%
! AATTTGGAATTGATTGATGG+AGG - Chr1:62322182-62322201 MsG0180003441.01.T01:intron 30.0%
! CACACAACTTTTGAATTTTC+TGG - Chr1:62320643-62320662 MsG0180003441.01.T01:intron 30.0%
! GAAGCAAACAAAGTATTATC+TGG + Chr1:62321194-62321213 None:intergenic 30.0%
! TAAACTTCCAAAGGATGTTT+TGG - Chr1:62320919-62320938 MsG0180003441.01.T01:intron 30.0%
! TAGTACTTAACTTTGTTTGG+CGG + Chr1:62323702-62323721 None:intergenic 30.0%
! TATGGGCTTTATAAATAGCA+TGG + Chr1:62323735-62323754 None:intergenic 30.0%
! TATGTTCTTGTTCTTGTTGT+TGG - Chr1:62320294-62320313 MsG0180003441.01.T01:CDS 30.0%
! TTATGAATGGTTTGAAACGA+GGG + Chr1:62319925-62319944 None:intergenic 30.0%
!!! CTGCATTTCTTTTAGTTCTA+AGG + Chr1:62323531-62323550 None:intergenic 30.0%
!!! GTTATTTTTTACCTTTGCAG+TGG - Chr1:62321264-62321283 MsG0180003441.01.T01:CDS 30.0%
!!! TATACTCATTGTTTTGATGC+TGG - Chr1:62322033-62322052 MsG0180003441.01.T01:intron 30.0%
AAAAGAAATGCAGGAGAGAA+TGG - Chr1:62323538-62323557 MsG0180003441.01.T01:intron 35.0%
AATCAAAATGACCCAAACCA+TGG - Chr1:62319799-62319818 MsG0180003441.01.T01:three_prime_UTR 35.0%
AATCTAGCCATAATACAGAG+AGG + Chr1:62322334-62322353 None:intergenic 35.0%
ACAAACAAAACAGCTCCATT+CGG + Chr1:62322759-62322778 None:intergenic 35.0%
ACAAAGAATGCTGTAATTGC+AGG - Chr1:62320702-62320721 MsG0180003441.01.T01:CDS 35.0%
AGAAAGCTGTTGTTCTTTAC+AGG - Chr1:62323276-62323295 MsG0180003441.01.T01:CDS 35.0%
AGAACCTCATTCTGAATATC+AGG + Chr1:62323934-62323953 None:intergenic 35.0%
AGGACATGTTTGAGGAAAAA+AGG - Chr1:62322894-62322913 MsG0180003441.01.T01:CDS 35.0%
AGTATCAAAGCCTGTTGAAA+TGG - Chr1:62319961-62319980 MsG0180003441.01.T01:intron 35.0%
ATATGCTTGTGCTTCATCAT+AGG + Chr1:62321336-62321355 None:intergenic 35.0%
ATCGAAATTCATGTTTGCTC+CGG + Chr1:62323017-62323036 None:intergenic 35.0%
ATTATAGTCATACCCAAGTC+CGG + Chr1:62324247-62324266 None:intergenic 35.0%
ATTTATCCTCTTCACGTAAG+CGG + Chr1:62321528-62321547 None:intergenic 35.0%
CAAAGAATGCTGTAATTGCA+GGG - Chr1:62320703-62320722 MsG0180003441.01.T01:CDS 35.0%
CATCATAGGAATCTCCAATA+AGG + Chr1:62321322-62321341 None:intergenic 35.0%
CCATCATATTATAAGCTCCA+CGG + Chr1:62320898-62320917 None:intergenic 35.0%
CTCAAATAGAGCTTCTACAA+TGG + Chr1:62322701-62322720 None:intergenic 35.0%
GAAGCATACTGCAAGTATTA+TGG - Chr1:62322959-62322978 MsG0180003441.01.T01:CDS 35.0%
GAAGTAGTTGCCATAGATAA+TGG + Chr1:62321950-62321969 None:intergenic 35.0%
GTTCACAGGTGAAGATAATT+GGG - Chr1:62321653-62321672 MsG0180003441.01.T01:intron 35.0%
TACAAGCCATTAGATTGCAT+TGG + Chr1:62324131-62324150 None:intergenic 35.0%
TACTCTCCGTCTCATATTAT+GGG + Chr1:62323752-62323771 None:intergenic 35.0%
TATGATGGCTAAACTTCCAA+AGG - Chr1:62320910-62320929 MsG0180003441.01.T01:intron 35.0%
TATGGCTAGATTTAGTGAAG+CGG - Chr1:62322342-62322361 MsG0180003441.01.T01:intron 35.0%
TGCAAGTATTATGGACTCAA+GGG - Chr1:62322968-62322987 MsG0180003441.01.T01:CDS 35.0%
TGTTCACAGGTGAAGATAAT+TGG - Chr1:62321652-62321671 MsG0180003441.01.T01:intron 35.0%
TGTTCCAATTATTGAGTCTC+CGG - Chr1:62319988-62320007 MsG0180003441.01.T01:CDS 35.0%
TGTTGAATCACCTCTTGAAT+TGG - Chr1:62320177-62320196 MsG0180003441.01.T01:intron 35.0%
TGTTTGTATCCGTGAGAATT+GGG - Chr1:62322772-62322791 MsG0180003441.01.T01:CDS 35.0%
TTACTCTCCGTCTCATATTA+TGG + Chr1:62323753-62323772 None:intergenic 35.0%
TTCACAGGTGAAGATAATTG+GGG - Chr1:62321654-62321673 MsG0180003441.01.T01:intron 35.0%
TTGTTTGTATCCGTGAGAAT+TGG - Chr1:62322771-62322790 MsG0180003441.01.T01:CDS 35.0%
! CATTAGATTGCATTGGTCAA+CGG + Chr1:62324124-62324143 None:intergenic 35.0%
! GATTATCTAGGACTTGACAT+TGG - Chr1:62322858-62322877 MsG0180003441.01.T01:CDS 35.0%
! GTATTCTCATTTAAGATCCG+TGG - Chr1:62320878-62320897 MsG0180003441.01.T01:intron 35.0%
! GTTATGAATGGTTTGAAACG+AGG + Chr1:62319926-62319945 None:intergenic 35.0%
! TGAGGAAAAAAGGAGCATAT+TGG - Chr1:62322904-62322923 MsG0180003441.01.T01:CDS 35.0%
! TGCAATTTGTGCATCGATAA+AGG - Chr1:62321846-62321865 MsG0180003441.01.T01:intron 35.0%
!! AACATGCAGTATTTGACTTG+AGG + Chr1:62324083-62324102 None:intergenic 35.0%
!! ACAGACTTGGTGTTAATGTT+TGG - Chr1:62320215-62320234 MsG0180003441.01.T01:intron 35.0%
!! ACTTTTGAATTTTCTGGCAC+TGG - Chr1:62320649-62320668 MsG0180003441.01.T01:intron 35.0%
!! GAGTTGATGATAGTACTTAC+AGG + Chr1:62320262-62320281 None:intergenic 35.0%
!! GTAACTGAACTTGCTAATGT+CGG - Chr1:62323049-62323068 MsG0180003441.01.T01:intron 35.0%
!! TGTGTTGATCATTTTGCTTG+AGG - Chr1:62320788-62320807 MsG0180003441.01.T01:intron 35.0%
!!! AAAGGATGTTTTGGAGAAAG+GGG - Chr1:62320928-62320947 MsG0180003441.01.T01:intron 35.0%
!!! CAAAGGATGTTTTGGAGAAA+GGG - Chr1:62320927-62320946 MsG0180003441.01.T01:intron 35.0%
AAGAACAACAGCTTTCTCCT+TGG + Chr1:62323273-62323292 None:intergenic 40.0%
AATCACTCAAGTTTGAACCC+CGG - Chr1:62321138-62321157 MsG0180003441.01.T01:intron 40.0%
ACACACACCACCATTATCTA+TGG - Chr1:62321937-62321956 MsG0180003441.01.T01:intron 40.0%
ACATTGGTAAACCTTGTTGC+AGG - Chr1:62322874-62322893 MsG0180003441.01.T01:CDS 40.0%
AGTCCATACAGAGAAAACTC+TGG - Chr1:62322512-62322531 MsG0180003441.01.T01:CDS 40.0%
ATGACATCGGGATGATCAAA+AGG + Chr1:62321401-62321420 None:intergenic 40.0%
ATGGCTAGATTTAGTGAAGC+GGG - Chr1:62322343-62322362 MsG0180003441.01.T01:intron 40.0%
ATTATAGGTTCGATTCCCCA+CGG - Chr1:62322471-62322490 MsG0180003441.01.T01:CDS 40.0%
ATTCAATCTCTTGGCAGACA+TGG + Chr1:62320993-62321012 None:intergenic 40.0%
CAACTCTTCCAAGTGAACAA+AGG + Chr1:62321603-62321622 None:intergenic 40.0%
CAAGTATTATGGACTCAAGG+GGG - Chr1:62322970-62322989 MsG0180003441.01.T01:CDS 40.0%
CCGTGGAGCTTATAATATGA+TGG - Chr1:62320895-62320914 MsG0180003441.01.T01:intron 40.0%
CCTCATTCTGAATATCAGGT+CGG + Chr1:62323930-62323949 None:intergenic 40.0%
CCTTTCTCCAAAACATCCTT+TGG + Chr1:62320929-62320948 None:intergenic 40.0%
CGTTGACCAATGCAATCTAA+TGG - Chr1:62324122-62324141 MsG0180003441.01.T01:CDS 40.0%
CTCATTCTGAATATCAGGTC+GGG + Chr1:62323929-62323948 None:intergenic 40.0%
CTGCAAGTATTATGGACTCA+AGG - Chr1:62322967-62322986 MsG0180003441.01.T01:CDS 40.0%
GAAAGATCATTTGCGTCACA+TGG - Chr1:62323607-62323626 MsG0180003441.01.T01:intron 40.0%
GAACTGAATTTCTTCTGACC+TGG - Chr1:62323201-62323220 MsG0180003441.01.T01:intron 40.0%
GACAACTAAGTGTTATGCCA+AGG - Chr1:62323451-62323470 MsG0180003441.01.T01:intron 40.0%
GATCATCCCGATGTCATTAT+GGG - Chr1:62321404-62321423 MsG0180003441.01.T01:intron 40.0%
GATGTCAATATTCTGAGCAG+TGG + Chr1:62323373-62323392 None:intergenic 40.0%
GATTGTGGAGTAAGTGCTAT+GGG - Chr1:62320112-62320131 MsG0180003441.01.T01:intron 40.0%
GCAAACTTTCACAAGGGAAA+GGG + Chr1:62321879-62321898 None:intergenic 40.0%
GCAAGTATTATGGACTCAAG+GGG - Chr1:62322969-62322988 MsG0180003441.01.T01:CDS 40.0%
GCTGGAGCAAATGTATTAGT+TGG - Chr1:62324174-62324193 MsG0180003441.01.T01:CDS 40.0%
GGAACAGAAACCATTTCAAC+AGG + Chr1:62319974-62319993 None:intergenic 40.0%
GGTAACTGGCATTGCAATAA+CGG + Chr1:62321023-62321042 None:intergenic 40.0%
GTGCAATGGAAAAACCTATC+AGG + Chr1:62321577-62321596 None:intergenic 40.0%
TAGCTAATGTTTGTCTCAGC+CGG + Chr1:62321160-62321179 None:intergenic 40.0%
TCGATGCACAAATTGCATCA+CGG + Chr1:62321843-62321862 None:intergenic 40.0%
TGATCATCCCGATGTCATTA+TGG - Chr1:62321403-62321422 MsG0180003441.01.T01:intron 40.0%
TGATTGTGGAGTAAGTGCTA+TGG - Chr1:62320111-62320130 MsG0180003441.01.T01:intron 40.0%
TGCAAACTTTCACAAGGGAA+AGG + Chr1:62321880-62321899 None:intergenic 40.0%
TGCAAATTCTAACCTGTGCA+CGG + Chr1:62324047-62324066 None:intergenic 40.0%
TTTACCTTTCCAGAAAGACC+TGG - Chr1:62323961-62323980 MsG0180003441.01.T01:intron 40.0%
TTTATTCCATTACCGTGCAC+AGG - Chr1:62324032-62324051 MsG0180003441.01.T01:CDS 40.0%
! AAGCCAGAGTTTTCTCTGTA+TGG + Chr1:62322518-62322537 None:intergenic 40.0%
! AATCCAGAGGTTTGTTTGCA+TGG - Chr1:62321545-62321564 MsG0180003441.01.T01:intron 40.0%
! AATGGTTTGAAACGAGGGTT+AGG + Chr1:62319920-62319939 None:intergenic 40.0%
! ACTTAACTTTGTTTGGCGGT+TGG + Chr1:62323698-62323717 None:intergenic 40.0%
! AGCTGCCCCATTTGATTTAA+TGG - Chr1:62323792-62323811 MsG0180003441.01.T01:intron 40.0%
! ATGGTTTGAAACGAGGGTTA+GGG + Chr1:62319919-62319938 None:intergenic 40.0%
! CAAAACTGTTTGAAACTGCC+AGG + Chr1:62323118-62323137 None:intergenic 40.0%
! CTTAACTTTGTTTGGCGGTT+GGG + Chr1:62323697-62323716 None:intergenic 40.0%
! GATATTCCATCGTGGACTAA+AGG + Chr1:62324010-62324029 None:intergenic 40.0%
! GTAGTTGCCATAGATAATGG+TGG + Chr1:62321947-62321966 None:intergenic 40.0%
! TTCAACAGGCTTTGATACTG+CGG + Chr1:62319960-62319979 None:intergenic 40.0%
!! GAAAGCACTGCAGATTATCT+AGG - Chr1:62322846-62322865 MsG0180003441.01.T01:CDS 40.0%
!! TGGTGCCATTAAATCACAAC+AGG - Chr1:62322445-62322464 MsG0180003441.01.T01:CDS 40.0%
!! TTGGCTTTGTCACTTCATCA+TGG - Chr1:62321700-62321719 MsG0180003441.01.T01:intron 40.0%
!!! CCAAAGGATGTTTTGGAGAA+AGG - Chr1:62320926-62320945 MsG0180003441.01.T01:intron 40.0%
AAGCTGACGTCAGAGACTAA+GGG - Chr1:62320406-62320425 MsG0180003441.01.T01:intron 45.0%
ACACCATGCAAACAAACCTC+TGG + Chr1:62321551-62321570 None:intergenic 45.0%
ACAGGTGAAGATAATTGGGG+TGG - Chr1:62321657-62321676 MsG0180003441.01.T01:intron 45.0%
ACATCGGGATGATCAAAAGG+AGG + Chr1:62321398-62321417 None:intergenic 45.0%
ACCCACTGATGCAAATGCAT+TGG - Chr1:62321681-62321700 MsG0180003441.01.T01:intron 45.0%
ACCTTTGCAGTGGAAATCTG+TGG - Chr1:62321274-62321293 MsG0180003441.01.T01:CDS 45.0%
ACGTCAGAGACTAAGGGTAA+GGG - Chr1:62320412-62320431 MsG0180003441.01.T01:intron 45.0%
ACTTCATCATGGCCAAAGAG+TGG - Chr1:62321711-62321730 MsG0180003441.01.T01:intron 45.0%
AGATGGTGTGGCTGTAAAAG+AGG - Chr1:62321759-62321778 MsG0180003441.01.T01:intron 45.0%
AGCCAATGCATTTGCATCAG+TGG + Chr1:62321686-62321705 None:intergenic 45.0%
AGCTAATGTTTGTCTCAGCC+GGG + Chr1:62321159-62321178 None:intergenic 45.0%
AGTTACCACTCCTGACATCA+AGG - Chr1:62321036-62321055 MsG0180003441.01.T01:CDS 45.0%
ATTATGGGTCAGGGAACTGT+CGG - Chr1:62321419-62321438 MsG0180003441.01.T01:intron 45.0%
CAAAATGACCCAAACCATGG+AGG - Chr1:62319802-62319821 MsG0180003441.01.T01:three_prime_UTR 45.0%
CATGCAATCTTTGTGCCTGT+GGG - Chr1:62321476-62321495 MsG0180003441.01.T01:intron 45.0%
CCAAAGCTTTCTGACAGACT+TGG - Chr1:62320202-62320221 MsG0180003441.01.T01:intron 45.0%
CCAAGTCTGTCAGAAAGCTT+TGG + Chr1:62320205-62320224 None:intergenic 45.0%
CCGACCTGATATTCAGAATG+AGG - Chr1:62323927-62323946 MsG0180003441.01.T01:intron 45.0%
CGTGAAGAGGATAAATCCAG+AGG - Chr1:62321532-62321551 MsG0180003441.01.T01:intron 45.0%
CTAGATTTAGTGAAGCGGGT+TGG - Chr1:62322347-62322366 MsG0180003441.01.T01:intron 45.0%
CTCAAACATGTCCTGCAACA+AGG + Chr1:62322888-62322907 None:intergenic 45.0%
CTTGTTGCAGGACATGTTTG+AGG - Chr1:62322886-62322905 MsG0180003441.01.T01:CDS 45.0%
GAAATTCATGTTTGCTCCGG+AGG + Chr1:62323014-62323033 None:intergenic 45.0%
GAATACCTTGATGTCAGGAG+TGG + Chr1:62321044-62321063 None:intergenic 45.0%
GATTCACTTCAGTATCCACC+TGG - Chr1:62320043-62320062 MsG0180003441.01.T01:CDS 45.0%
GCCAATGCATTTGCATCAGT+GGG + Chr1:62321685-62321704 None:intergenic 45.0%
GGCACAAAGATTGCATGAAC+CGG + Chr1:62321473-62321492 None:intergenic 45.0%
GGCGTTGCAATTCAATCTCT+TGG + Chr1:62321002-62321021 None:intergenic 45.0%
GGTGGATACTGAAGTGAATC+CGG + Chr1:62320043-62320062 None:intergenic 45.0%
TAAGCTGACGTCAGAGACTA+AGG - Chr1:62320405-62320424 MsG0180003441.01.T01:intron 45.0%
TAAGCTGTCATTCGTCCGAA+TGG - Chr1:62322741-62322760 MsG0180003441.01.T01:CDS 45.0%
TAGACTCCTTTAGTCCACGA+TGG - Chr1:62324001-62324020 MsG0180003441.01.T01:intron 45.0%
TAGTGTGGTGCATTCTGTGA+CGG + Chr1:62319889-62319908 None:intergenic 45.0%
TCAGCTGGAAATCATGCTCA+AGG - Chr1:62320962-62320981 MsG0180003441.01.T01:intron 45.0%
TCATGCAATCTTTGTGCCTG+TGG - Chr1:62321475-62321494 MsG0180003441.01.T01:intron 45.0%
TCCAATTATTGAGTCTCCGG+CGG - Chr1:62319991-62320010 MsG0180003441.01.T01:CDS 45.0%
TCCACAGATTTCCACTGCAA+AGG + Chr1:62321278-62321297 None:intergenic 45.0%
TCCCTGACCCATAATGACAT+CGG + Chr1:62321414-62321433 None:intergenic 45.0%
TCTGCTGTTAACTGTCATGC+CGG - Chr1:62323087-62323106 MsG0180003441.01.T01:intron 45.0%
TGAATTTCTTCTGACCTGGC+AGG - Chr1:62323205-62323224 MsG0180003441.01.T01:intron 45.0%
TTCTAACCTGTGCACGGTAA+TGG + Chr1:62324041-62324060 None:intergenic 45.0%
TTGATGTCAGGAGTGGTAAC+TGG + Chr1:62321037-62321056 None:intergenic 45.0%
! AAGAAGCGTGCTATAGAGGA+CGG - Chr1:62321359-62321378 MsG0180003441.01.T01:CDS 45.0%
! ATCAAAGCACCAGGTCTTTC+TGG + Chr1:62323973-62323992 None:intergenic 45.0%
! ATGGCTTGTACTTGCTGCTT+CGG - Chr1:62324141-62324160 MsG0180003441.01.T01:CDS 45.0%
! ATTGTGTTGGTGTGCAGTGT+TGG - Chr1:62323494-62323513 MsG0180003441.01.T01:intron 45.0%
! CAATCTCTCAGACGTTGACT+TGG - Chr1:62323583-62323602 MsG0180003441.01.T01:intron 45.0%
! TCATGGCCAAAGAGTGGTTT+TGG - Chr1:62321717-62321736 MsG0180003441.01.T01:intron 45.0%
! TGCTAAGAAGCGTGCTATAG+AGG - Chr1:62321355-62321374 MsG0180003441.01.T01:CDS 45.0%
!! TTGCATGGTGTTGTCCTGAT+AGG - Chr1:62321560-62321579 MsG0180003441.01.T01:intron 45.0%
!! TTGTGCAAGGAGTTGGTAGA+TGG - Chr1:62321802-62321821 MsG0180003441.01.T01:intron 45.0%
!! AATGAATAATAAAATATTAT+TGG + Chr1:62323477-62323496 None:intergenic 5.0%
!!! TATTAATTGATTTTTTTTTT+GGG - Chr1:62320756-62320775 MsG0180003441.01.T01:intron 5.0%
!!! TTATTAATTGATTTTTTTTT+TGG - Chr1:62320755-62320774 MsG0180003441.01.T01:CDS 5.0%
AATTATTGAGTCTCCGGCGG+CGG - Chr1:62319994-62320013 MsG0180003441.01.T01:CDS 50.0%
AATTCCTCCATCTCGCTGCT+TGG + Chr1:62324210-62324229 None:intergenic 50.0%
ACTAAGGGTAAGGGTCCGTT+TGG - Chr1:62320421-62320440 MsG0180003441.01.T01:intron 50.0%
AGTGGAAATCTGTGGAGAGG+TGG - Chr1:62321282-62321301 MsG0180003441.01.T01:CDS 50.0%
ATAGTCATACCCAAGTCCGG+TGG + Chr1:62324244-62324263 None:intergenic 50.0%
ATTTCTTCTGACCTGGCAGG+TGG - Chr1:62323208-62323227 MsG0180003441.01.T01:intron 50.0%
CAAGAACCGACTAATCCGAG+GGG + Chr1:62322577-62322596 None:intergenic 50.0%
CAGTATCCACCTGGTTACGT+TGG - Chr1:62320052-62320071 MsG0180003441.01.T01:CDS 50.0%
CATCTGCAAATCCTCCAACC+TGG + Chr1:62321744-62321763 None:intergenic 50.0%
CCCGATGTCATTATGGGTCA+GGG - Chr1:62321410-62321429 MsG0180003441.01.T01:intron 50.0%
CCCTGACCCATAATGACATC+GGG + Chr1:62321413-62321432 None:intergenic 50.0%
CCTGGTCCAAAACCACTCTT+TGG + Chr1:62321726-62321745 None:intergenic 50.0%
CTACCAACTCCTTGCACAAG+CGG + Chr1:62321801-62321820 None:intergenic 50.0%
GAATTCAACGATCGTGCCAC+CGG - Chr1:62324225-62324244 MsG0180003441.01.T01:CDS 50.0%
GACGTCAGAGACTAAGGGTA+AGG - Chr1:62320411-62320430 MsG0180003441.01.T01:intron 50.0%
GCAAGAACCGACTAATCCGA+GGG + Chr1:62322578-62322597 None:intergenic 50.0%
GCATTCTGTGACGGTGGTTA+CGG + Chr1:62319880-62319899 None:intergenic 50.0%
GCTAATGTTTGTCTCAGCCG+GGG + Chr1:62321158-62321177 None:intergenic 50.0%
GGAAACTTTCCGCTTGTGCA+AGG - Chr1:62321789-62321808 MsG0180003441.01.T01:intron 50.0%
GGGGTTATATGCTCTTCAGC+TGG - Chr1:62320947-62320966 MsG0180003441.01.T01:intron 50.0%
GGTGTGGCTGTAAAAGAGGT+TGG - Chr1:62321763-62321782 MsG0180003441.01.T01:intron 50.0%
GGTTAGGGTGAAGAGTAGTG+TGG + Chr1:62319904-62319923 None:intergenic 50.0%
GTGGAAATCTGTGGAGAGGT+GGG - Chr1:62321283-62321302 MsG0180003441.01.T01:CDS 50.0%
TCCCGATGTCATTATGGGTC+AGG - Chr1:62321409-62321428 MsG0180003441.01.T01:intron 50.0%
TGCACGTGCCTTTGTTCACT+TGG - Chr1:62321592-62321611 MsG0180003441.01.T01:intron 50.0%
TGCAGTGGAAATCTGTGGAG+AGG - Chr1:62321279-62321298 MsG0180003441.01.T01:CDS 50.0%
TGGAAATCTGTGGAGAGGTG+GGG - Chr1:62321284-62321303 MsG0180003441.01.T01:CDS 50.0%
TGGAGGATTTGCAGATGGTG+TGG - Chr1:62321747-62321766 MsG0180003441.01.T01:intron 50.0%
TGGCGGTTGGGAATAGTGAA+GGG + Chr1:62323685-62323704 None:intergenic 50.0%
TTATGGGTCAGGGAACTGTC+GGG - Chr1:62321420-62321439 MsG0180003441.01.T01:intron 50.0%
TTGGCGGTTGGGAATAGTGA+AGG + Chr1:62323686-62323705 None:intergenic 50.0%
TTTAACCAACCCTCGCAAGG+TGG - Chr1:62322537-62322556 MsG0180003441.01.T01:CDS 50.0%
TTTCCGCTTGTGCAAGGAGT+TGG - Chr1:62321795-62321814 MsG0180003441.01.T01:intron 50.0%
TTTCTTCTGACCTGGCAGGT+GGG - Chr1:62323209-62323228 MsG0180003441.01.T01:intron 50.0%
! AACAGGCTTTGATACTGCGG+CGG + Chr1:62319957-62319976 None:intergenic 50.0%
! AGCACCAGGTCTTTCTGGAA+AGG + Chr1:62323968-62323987 None:intergenic 50.0%
! AGCTTTGGCGCCAATTCAAG+AGG + Chr1:62320190-62320209 None:intergenic 50.0%
! AGGAGCATATTGGAACCAGC+AGG - Chr1:62322914-62322933 MsG0180003441.01.T01:CDS 50.0%
! CAGGTTGGAGGATTTGCAGA+TGG - Chr1:62321742-62321761 MsG0180003441.01.T01:intron 50.0%
! GCTTTTAACCAACCCTCGCA+AGG - Chr1:62322534-62322553 MsG0180003441.01.T01:CDS 50.0%
! GGTGGTGATGAAGGTGATTG+TGG - Chr1:62320097-62320116 MsG0180003441.01.T01:CDS 50.0%
! GTATTGCCGCTTACGTGAAG+AGG - Chr1:62321519-62321538 MsG0180003441.01.T01:intron 50.0%
! GTGAACAAAGGCACGTGCAA+TGG + Chr1:62321591-62321610 None:intergenic 50.0%
! TGTACTTGCTGCTTCGGACA+GGG - Chr1:62324147-62324166 MsG0180003441.01.T01:CDS 50.0%
! TTGTACTTGCTGCTTCGGAC+AGG - Chr1:62324146-62324165 MsG0180003441.01.T01:CDS 50.0%
!! ATTCCCCACGGTGCTGATTT+CGG - Chr1:62322483-62322502 MsG0180003441.01.T01:CDS 50.0%
!! ATTGGACCCCTCGGATTAGT+CGG - Chr1:62322568-62322587 MsG0180003441.01.T01:CDS 50.0%
!! GGTGCTACTGTGGTCCTTAT+TGG - Chr1:62321305-62321324 MsG0180003441.01.T01:CDS 50.0%
!!! AGAGTGGTTTTGGACCAGGT+TGG - Chr1:62321727-62321746 MsG0180003441.01.T01:intron 50.0%
!!! CCAAAGAGTGGTTTTGGACC+AGG - Chr1:62321723-62321742 MsG0180003441.01.T01:intron 50.0%
ATCGTAGCGCCTCCATGGTT+TGG + Chr1:62319814-62319833 None:intergenic 55.0%
ATCTTTGTGCCTGTGGGAGG+TGG - Chr1:62321482-62321501 MsG0180003441.01.T01:intron 55.0%
ATGAGGTTGTGGCTGTGAGG+TGG + Chr1:62319849-62319868 None:intergenic 55.0%
CATGAACCGGACGCTTCATC+TGG + Chr1:62321460-62321479 None:intergenic 55.0%
CGCAAGAACCGACTAATCCG+AGG + Chr1:62322579-62322598 None:intergenic 55.0%
GAGATGAGGTTGTGGCTGTG+AGG + Chr1:62319852-62319871 None:intergenic 55.0%
GCAATCTTTGTGCCTGTGGG+AGG - Chr1:62321479-62321498 MsG0180003441.01.T01:intron 55.0%
GCCGCCGGAGACTCAATAAT+TGG + Chr1:62319995-62320014 None:intergenic 55.0%
GCGGCGGTGGTTGTTATGAA+TGG + Chr1:62319938-62319957 None:intergenic 55.0%
GCTGTTAACTGTCATGCCGG+AGG - Chr1:62323090-62323109 MsG0180003441.01.T01:intron 55.0%
GGAAAATCGTAGCGCCTCCA+TGG + Chr1:62319819-62319838 None:intergenic 55.0%
GGCTGTAAAAGAGGTTGGCG+AGG - Chr1:62321768-62321787 MsG0180003441.01.T01:intron 55.0%
TCAGGTTCCAAGCAGCGAGA+TGG - Chr1:62324200-62324219 MsG0180003441.01.T01:CDS 55.0%
TCCACCTGGTTACGTTGGAG+CGG - Chr1:62320057-62320076 MsG0180003441.01.T01:CDS 55.0%
TCCGAGGTTGAAGGTTTCGC+CGG - Chr1:62320021-62320040 MsG0180003441.01.T01:CDS 55.0%
TCCGGCGAAACCTTCAACCT+CGG + Chr1:62320025-62320044 None:intergenic 55.0%
TCGTAGCGCCTCCATGGTTT+GGG + Chr1:62319813-62319832 None:intergenic 55.0%
TGGTTACGGAGGAGGAGATG+AGG + Chr1:62319866-62319885 None:intergenic 55.0%
TGTGGTGCATTCTGTGACGG+TGG + Chr1:62319886-62319905 None:intergenic 55.0%
TTCTGTGACGGTGGTTACGG+AGG + Chr1:62319877-62319896 None:intergenic 55.0%
TTCTTCTGACCTGGCAGGTG+GGG - Chr1:62323210-62323229 MsG0180003441.01.T01:intron 55.0%
TTGAAACTGCCAGGCTCCTC+CGG + Chr1:62323109-62323128 None:intergenic 55.0%
! AATGGTGGTGTGTGTGCGTG+TGG + Chr1:62321932-62321951 None:intergenic 55.0%
! AGGACACGTGGTGGTGATGA+AGG - Chr1:62320088-62320107 MsG0180003441.01.T01:CDS 55.0%
!!! GTGGTTTTGGACCAGGTTGG+AGG - Chr1:62321730-62321749 MsG0180003441.01.T01:intron 55.0%
AACGATCGTGCCACCGGACT+TGG - Chr1:62324231-62324250 MsG0180003441.01.T01:CDS 60.0%
ACCCACCGAAATCAGCACCG+TGG + Chr1:62322491-62322510 None:intergenic 60.0%
ACCGCTCCAACGTAACCAGG+TGG + Chr1:62320061-62320080 None:intergenic 60.0%
ACGATCGTGCCACCGGACTT+GGG - Chr1:62324232-62324251 MsG0180003441.01.T01:CDS 60.0%
ACGTTGGAGCGGTTCCTGAC+AGG - Chr1:62320068-62320087 MsG0180003441.01.T01:CDS 60.0%
AGGTTGTGGCTGTGAGGTGG+TGG + Chr1:62319846-62319865 None:intergenic 60.0%
ATGAGACCACCACCTCCCAC+AGG + Chr1:62321494-62321513 None:intergenic 60.0%
ATTCATCTGCCCCACCTGCC+AGG + Chr1:62323222-62323241 None:intergenic 60.0%
CCACCGAAATCAGCACCGTG+GGG + Chr1:62322489-62322508 None:intergenic 60.0%
CCCACCGAAATCAGCACCGT+GGG + Chr1:62322490-62322509 None:intergenic 60.0%
CGGAGGAGGAGATGAGGTTG+TGG + Chr1:62319860-62319879 None:intergenic 60.0%
GAGAGAGAGCTGGGAGTGGT+AGG - Chr1:62322369-62322388 MsG0180003441.01.T01:intron 60.0%
GGAACCGCTCCAACGTAACC+AGG + Chr1:62320064-62320083 None:intergenic 60.0%
GGCGAAACCTTCAACCTCGG+AGG + Chr1:62320022-62320041 None:intergenic 60.0%
GGTTCCAAGCAGCGAGATGG+AGG - Chr1:62324203-62324222 MsG0180003441.01.T01:CDS 60.0%
GTTCCTGACAGGACACGTGG+TGG - Chr1:62320079-62320098 MsG0180003441.01.T01:CDS 60.0%
GTTGGAGAGAGAGCTGGGAG+TGG - Chr1:62322365-62322384 MsG0180003441.01.T01:intron 60.0%
TCACCACCACGTGTCCTGTC+AGG + Chr1:62320085-62320104 None:intergenic 60.0%
TGCTTCGGACAGGGTGAAGC+TGG - Chr1:62324156-62324175 MsG0180003441.01.T01:CDS 60.0%
TGTGACGGTGGTTACGGAGG+AGG + Chr1:62319874-62319893 None:intergenic 60.0%
TTTGTGCCTGTGGGAGGTGG+TGG - Chr1:62321485-62321504 MsG0180003441.01.T01:intron 60.0%
! AGGCTTTGATACTGCGGCGG+CGG + Chr1:62319954-62319973 None:intergenic 60.0%
! GGAGGTGGTGGTCTCATTGC+TGG - Chr1:62321497-62321516 MsG0180003441.01.T01:intron 60.0%
! TGTGCGCCAGATGAAGCGTC+CGG - Chr1:62321451-62321470 MsG0180003441.01.T01:intron 60.0%
! TTGTGGCTGTGAGGTGGTGG+AGG + Chr1:62319843-62319862 None:intergenic 60.0%
!! AAGCGGGTTGGAGAGAGAGC+TGG - Chr1:62322359-62322378 MsG0180003441.01.T01:intron 60.0%
!! AGCGGGTTGGAGAGAGAGCT+GGG - Chr1:62322360-62322379 MsG0180003441.01.T01:intron 60.0%
!! CCCACGGTGCTGATTTCGGT+GGG - Chr1:62322487-62322506 MsG0180003441.01.T01:CDS 60.0%
ACCAACCCTCGCAAGGTGGC+CGG - Chr1:62322541-62322560 MsG0180003441.01.T01:CDS 65.0%
ACTGTCATGCCGGAGGAGCC+TGG - Chr1:62323097-62323116 MsG0180003441.01.T01:intron 65.0%
CTTTGATACTGCGGCGGCGG+TGG + Chr1:62319951-62319970 None:intergenic 65.0%
GCAGGCGCTCTTGCTCTTGC+TGG - Chr1:62322932-62322951 MsG0180003441.01.T01:CDS 65.0%
GCGGTTCCTGACAGGACACG+TGG - Chr1:62320076-62320095 MsG0180003441.01.T01:CDS 65.0%
GGGTCAGGGAACTGTCGGGA+TGG - Chr1:62321424-62321443 MsG0180003441.01.T01:intron 65.0%
TCCGAGGGGTCCAATCCCAC+CGG + Chr1:62322563-62322582 None:intergenic 65.0%
!! CCCCACGGTGCTGATTTCGG+TGG - Chr1:62322486-62322505 MsG0180003441.01.T01:CDS 65.0%
!! GCAAGAGCAAGAGCGCCTGC+TGG + Chr1:62322932-62322951 None:intergenic 65.0%
!! GGAGAGGTGGGGTGCTACTG+TGG - Chr1:62321295-62321314 MsG0180003441.01.T01:CDS 65.0%
!! TGGCTGTGAGGTGGTGGAGG+AGG + Chr1:62319840-62319859 None:intergenic 65.0%
AACCCTCGCAAGGTGGCCGG+TGG - Chr1:62322544-62322563 MsG0180003441.01.T01:CDS 70.0%
ACCCTCGCAAGGTGGCCGGT+GGG - Chr1:62322545-62322564 MsG0180003441.01.T01:CDS 70.0%
ACCGGCCACCTTGCGAGGGT+TGG + Chr1:62322545-62322564 None:intergenic 70.0%
ATCCCACCGGCCACCTTGCG+AGG + Chr1:62322550-62322569 None:intergenic 70.0%
CGCAAGGTGGCCGGTGGGAT+TGG - Chr1:62322550-62322569 MsG0180003441.01.T01:CDS 70.0%
GCCGGTGGGATTGGACCCCT+CGG - Chr1:62322559-62322578 MsG0180003441.01.T01:CDS 70.0%
GGCGGCTCCTCCGAGGTTGA+AGG - Chr1:62320012-62320031 MsG0180003441.01.T01:CDS 70.0%
TCCCACCGGCCACCTTGCGA+GGG + Chr1:62322549-62322568 None:intergenic 70.0%
AACCTCGGAGGAGCCGCCGC+CGG + Chr1:62320010-62320029 None:intergenic 75.0%
! CTCCGGCGGCGGCTCCTCCG+AGG - Chr1:62320005-62320024 MsG0180003441.01.T01:CDS 85.0%
Chromosome Type Strat End Strand Name
Chr1 gene 62319722 62324563 62319722 ID=MsG0180003441.01;Name=MsG0180003441.01
Chr1 mRNA 62319722 62324563 62319722 ID=MsG0180003441.01.T01;Parent=MsG0180003441.01;Name=MsG0180003441.01.T01;_AED=0.35;_eAED=0.35;_QI=61|1|1|1|0.88|0.8|10|255|608
Chr1 exon 62324024 62324477 62324024 ID=MsG0180003441.01.T01:exon:49853;Parent=MsG0180003441.01.T01
Chr1 exon 62324501 62324563 62324501 ID=MsG0180003441.01.T01:exon:49852;Parent=MsG0180003441.01.T01
Chr1 five_prime_UTR 62324503 62324563 62324503 ID=MsG0180003441.01.T01:five_prime_utr;Parent=MsG0180003441.01.T01
Chr1 CDS 62324501 62324502 62324501 ID=MsG0180003441.01.T01:cds;Parent=MsG0180003441.01.T01
Chr1 CDS 62324024 62324477 62324024 ID=MsG0180003441.01.T01:cds;Parent=MsG0180003441.01.T01
Chr1 CDS 62323228 62323407 62323228 ID=MsG0180003441.01.T01:cds;Parent=MsG0180003441.01.T01
Chr1 CDS 62322732 62323001 62322732 ID=MsG0180003441.01.T01:cds;Parent=MsG0180003441.01.T01
Chr1 CDS 62322418 62322624 62322418 ID=MsG0180003441.01.T01:cds;Parent=MsG0180003441.01.T01
Chr1 CDS 62321141 62321389 62321141 ID=MsG0180003441.01.T01:cds;Parent=MsG0180003441.01.T01
Chr1 CDS 62320988 62321058 62320988 ID=MsG0180003441.01.T01:cds;Parent=MsG0180003441.01.T01
Chr1 CDS 62320657 62320774 62320657 ID=MsG0180003441.01.T01:cds;Parent=MsG0180003441.01.T01
Chr1 CDS 62320232 62320366 62320232 ID=MsG0180003441.01.T01:cds;Parent=MsG0180003441.01.T01
Chr1 CDS 62319977 62320117 62319977 ID=MsG0180003441.01.T01:cds;Parent=MsG0180003441.01.T01
Chr1 three_prime_UTR 62319722 62319976 62319722 ID=MsG0180003441.01.T01:three_prime_utr;Parent=MsG0180003441.01.T01
Chr1 mRNA 62319722 62324562 62319722 ID=MsG0180003441.01.T02;Parent=MsG0180003441.01;Name=MsG0180003441.01.T02;_AED=0.35;_eAED=0.35;_QI=83|1|1|1|1|1|9|255|608
Chr1 exon 62324024 62324562 62324024 ID=MsG0180003441.01.T02:exon:49862;Parent=MsG0180003441.01.T02
Chr1 five_prime_UTR 62324480 62324562 62324480 ID=MsG0180003441.01.T02:five_prime_utr;Parent=MsG0180003441.01.T02
Chr1 CDS 62324024 62324479 62324024 ID=MsG0180003441.01.T02:cds;Parent=MsG0180003441.01.T02
Chr1 CDS 62323228 62323407 62323228 ID=MsG0180003441.01.T02:cds;Parent=MsG0180003441.01.T02
Chr1 CDS 62322732 62323001 62322732 ID=MsG0180003441.01.T02:cds;Parent=MsG0180003441.01.T02
Chr1 CDS 62322418 62322624 62322418 ID=MsG0180003441.01.T02:cds;Parent=MsG0180003441.01.T02
Chr1 CDS 62321141 62321389 62321141 ID=MsG0180003441.01.T02:cds;Parent=MsG0180003441.01.T02
Chr1 CDS 62320988 62321058 62320988 ID=MsG0180003441.01.T02:cds;Parent=MsG0180003441.01.T02
Chr1 CDS 62320657 62320774 62320657 ID=MsG0180003441.01.T02:cds;Parent=MsG0180003441.01.T02
Chr1 CDS 62320232 62320366 62320232 ID=MsG0180003441.01.T02:cds;Parent=MsG0180003441.01.T02
Chr1 CDS 62319977 62320117 62319977 ID=MsG0180003441.01.T02:cds;Parent=MsG0180003441.01.T02
Chr1 three_prime_UTR 62319722 62319976 62319722 ID=MsG0180003441.01.T02:three_prime_utr;Parent=MsG0180003441.01.T02
Gene Sequence

>MsG0180003441.01.T01

ATGACCCAAACCATGGAGGCGCTACGATTTTCCTCCTCCACCACCTCACAGCCACAACCTCATCTCCTCCTCCGTAACCACCGTCACAGAATGCACCACACTACTCTTCACCCTAACCCTCGTTTCAAACCATTCATAACAACCACCGCCGCCGCAGTATCAAAGCCTGTTGAAATGGTTTCTGTTCCAATTATTGAGTCTCCGGCGGCGGCTCCTCCGAGGTTGAAGGTTTCGCCGGATTCACTTCAGTATCCACCTGGTTACGTTGGAGCGGTTCCTGACAGGACACGTGGTGGTGATGAAGGTGATTGTGGAGTAAGTGCTATGGGTTATTTGACTAGTATACTTACTTCTAAGGTTTATGATGTTGCTGTTGAATCACCTCTTGAATTGGCGCCAAAGCTTTCTGACAGACTTGGTGTTAATGTTTGGCTTAAACGTGAAGATCTTCAACCTGTATTCTCATTTAAGATCCGTGGAGCTTATAATATGATGGCTAAACTTCCAAAGGATGTTTTGGAGAAAGGGGTTATATGCTCTTCAGCTGGAAATCATGCTCAAGGAGTAGCCATGTCTGCCAAGAGATTGAATTGCAACGCCGTTATTGCAATGCCAGTTACCACTCCTGACATCAAGTGGAAATCTGTGGAGAGGTGGGGTGCTACTGTGGTCCTTATTGGAGATTCCTATGATGAAGCACAAGCATATGCTAAGAAGCGTGCTATAGAGGACGGTCGTACATTCATACCTCCTTTTGATCATCCCGATGTCATTATGGGTCAGGGAACTGTCGGGATGGAAATTGTGCGCCAGATGAAGCGTCCGGTTCATGCAATCTTTGTGCCTGTGGGAGGTGGTGGTCTCATTGCTGGTATTGCCGCTTACGTGAAGAGGATAAATCCAGAGGTGAAGATAATTGGGGTGGAACCCACTGATGCAAATGCATTGGCTTTGTCACTTCATCATGGCCAAAGAGTGGTTTTGGACCAGGTTGGAGGATTTGCAGATGGTGTGGCTGTAAAAGAGGTTGGCGAGGAAACTTTCCGCTTGTGCAAGGAGTTGGTAGATGGTGTTGTTCTTGTAAGCCGTGATGCAATTTGTGCATCGATAAAGGACATGTTTGAGGAAAAAAGGAGCATATTGGAACCAGCAGGCGCTCTTGCTCTTGCTGGAGCTGAAGCATACTGCAAGTATTATGGACTCAAGGGGGAAAATGTTATAGCAATAACCTCCGGAGCAAACATGAATTTCGATAAACTTAGGATAGTAACTGAACTTGCTAATGTCGGTCGTAAACAAGAAGCTCTGCTGTTAACTGTCATGCCGGAGGAGCCTGGCAGTTTCAAACAGTTTTGTGAATTGGTGGGGCAGATGAATATCACAGAATTCAAATACAGATATAGTTCCAAGGAGAAAGCTGTTGTTCTTTACAGTGTTGGTGTTCACACGCCCTTAGAACTAAAAGAAATGCAGGAGAGAATGGAAACTTCTCAGCTTGTAACTCACAATCTCTCAGACGTTGACTTGGTGAAAGATCATTTGCGTCACATGATGGGAGCCCGACCTGATATTCAGAATGAGGTTCTTTGTCGTTTTACCTTTCCAGAAAGACCTGGTGCTTTGATGAAATTTTTAGACTCCTTTAGTCCACGATGGAATATCTCTTTATTCCATTACCGTGCACAGGGTGAAGCTGGAGCAAATGTATTAGTTGGAATTCAGGTTCCAAGCAGCGAGATGGAGGAATTCAACGATCGTGCCACCGGACTTGGGTATGACTATAATGTGCTGTCTGATGACCTTTTCTTCAAGCTTTTAATGCATTGA

>MsG0180003441.01.T02

ATGACCCAAACCATGGAGGCGCTACGATTTTCCTCCTCCACCACCTCACAGCCACAACCTCATCTCCTCCTCCGTAACCACCGTCACAGAATGCACCACACTACTCTTCACCCTAACCCTCGTTTCAAACCATTCATAACAACCACCGCCGCCGCAGTATCAAAGCCTGTTGAAATGGTTTCTGTTCCAATTATTGAGTCTCCGGCGGCGGCTCCTCCGAGGTTGAAGGTTTCGCCGGATTCACTTCAGTATCCACCTGGTTACGTTGGAGCGGTTCCTGACAGGACACGTGGTGGTGATGAAGGTGATTGTGGAGTAAGTGCTATGGGTTATTTGACTAGTATACTTACTTCTAAGGTTTATGATGTTGCTGTTGAATCACCTCTTGAATTGGCGCCAAAGCTTTCTGACAGACTTGGTGTTAATGTTTGGCTTAAACGTGAAGATCTTCAACCTGTATTCTCATTTAAGATCCGTGGAGCTTATAATATGATGGCTAAACTTCCAAAGGATGTTTTGGAGAAAGGGGTTATATGCTCTTCAGCTGGAAATCATGCTCAAGGAGTAGCCATGTCTGCCAAGAGATTGAATTGCAACGCCGTTATTGCAATGCCAGTTACCACTCCTGACATCAAGTGGAAATCTGTGGAGAGGTGGGGTGCTACTGTGGTCCTTATTGGAGATTCCTATGATGAAGCACAAGCATATGCTAAGAAGCGTGCTATAGAGGACGGTCGTACATTCATACCTCCTTTTGATCATCCCGATGTCATTATGGGTCAGGGAACTGTCGGGATGGAAATTGTGCGCCAGATGAAGCGTCCGGTTCATGCAATCTTTGTGCCTGTGGGAGGTGGTGGTCTCATTGCTGGTATTGCCGCTTACGTGAAGAGGATAAATCCAGAGGTGAAGATAATTGGGGTGGAACCCACTGATGCAAATGCATTGGCTTTGTCACTTCATCATGGCCAAAGAGTGGTTTTGGACCAGGTTGGAGGATTTGCAGATGGTGTGGCTGTAAAAGAGGTTGGCGAGGAAACTTTCCGCTTGTGCAAGGAGTTGGTAGATGGTGTTGTTCTTGTAAGCCGTGATGCAATTTGTGCATCGATAAAGGACATGTTTGAGGAAAAAAGGAGCATATTGGAACCAGCAGGCGCTCTTGCTCTTGCTGGAGCTGAAGCATACTGCAAGTATTATGGACTCAAGGGGGAAAATGTTATAGCAATAACCTCCGGAGCAAACATGAATTTCGATAAACTTAGGATAGTAACTGAACTTGCTAATGTCGGTCGTAAACAAGAAGCTCTGCTGTTAACTGTCATGCCGGAGGAGCCTGGCAGTTTCAAACAGTTTTGTGAATTGGTGGGGCAGATGAATATCACAGAATTCAAATACAGATATAGTTCCAAGGAGAAAGCTGTTGTTCTTTACAGTGTTGGTGTTCACACGCCCTTAGAACTAAAAGAAATGCAGGAGAGAATGGAAACTTCTCAGCTTGTAACTCACAATCTCTCAGACGTTGACTTGGTGAAAGATCATTTGCGTCACATGATGGGAGCCCGACCTGATATTCAGAATGAGGTTCTTTGTCGTTTTACCTTTCCAGAAAGACCTGGTGCTTTGATGAAATTTTTAGACTCCTTTAGTCCACGATGGAATATCTCTTTATTCCATTACCGTGCACAGGGTGAAGCTGGAGCAAATGTATTAGTTGGAATTCAGGTTCCAAGCAGCGAGATGGAGGAATTCAACGATCGTGCCACCGGACTTGGGTATGACTATAATGTGCTGTCTGATGACCTTTTCTTCAAGCTTTTAATGCATTGA
Protein sequence

>MsG0180003441.01.T01

MTQTMEALRFSSSTTSQPQPHLLLRNHRHRMHHTTLHPNPRFKPFITTTAAAVSKPVEMVSVPIIESPAAAPPRLKVSPDSLQYPPGYVGAVPDRTRGGDEGDCGVSAMGYLTSILTSKVYDVAVESPLELAPKLSDRLGVNVWLKREDLQPVFSFKIRGAYNMMAKLPKDVLEKGVICSSAGNHAQGVAMSAKRLNCNAVIAMPVTTPDIKWKSVERWGATVVLIGDSYDEAQAYAKKRAIEDGRTFIPPFDHPDVIMGQGTVGMEIVRQMKRPVHAIFVPVGGGGLIAGIAAYVKRINPEVKIIGVEPTDANALALSLHHGQRVVLDQVGGFADGVAVKEVGEETFRLCKELVDGVVLVSRDAICASIKDMFEEKRSILEPAGALALAGAEAYCKYYGLKGENVIAITSGANMNFDKLRIVTELANVGRKQEALLLTVMPEEPGSFKQFCELVGQMNITEFKYRYSSKEKAVVLYSVGVHTPLELKEMQERMETSQLVTHNLSDVDLVKDHLRHMMGARPDIQNEVLCRFTFPERPGALMKFLDSFSPRWNISLFHYRAQGEAGANVLVGIQVPSSEMEEFNDRATGLGYDYNVLSDDLFFKLLMH*

>MsG0180003441.01.T02

MTQTMEALRFSSSTTSQPQPHLLLRNHRHRMHHTTLHPNPRFKPFITTTAAAVSKPVEMVSVPIIESPAAAPPRLKVSPDSLQYPPGYVGAVPDRTRGGDEGDCGVSAMGYLTSILTSKVYDVAVESPLELAPKLSDRLGVNVWLKREDLQPVFSFKIRGAYNMMAKLPKDVLEKGVICSSAGNHAQGVAMSAKRLNCNAVIAMPVTTPDIKWKSVERWGATVVLIGDSYDEAQAYAKKRAIEDGRTFIPPFDHPDVIMGQGTVGMEIVRQMKRPVHAIFVPVGGGGLIAGIAAYVKRINPEVKIIGVEPTDANALALSLHHGQRVVLDQVGGFADGVAVKEVGEETFRLCKELVDGVVLVSRDAICASIKDMFEEKRSILEPAGALALAGAEAYCKYYGLKGENVIAITSGANMNFDKLRIVTELANVGRKQEALLLTVMPEEPGSFKQFCELVGQMNITEFKYRYSSKEKAVVLYSVGVHTPLELKEMQERMETSQLVTHNLSDVDLVKDHLRHMMGARPDIQNEVLCRFTFPERPGALMKFLDSFSPRWNISLFHYRAQGEAGANVLVGIQVPSSEMEEFNDRATGLGYDYNVLSDDLFFKLLMH*