AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180003601.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180003601.01.T01 MTR_1g066390 94.860 214 11 0 143 356 16 229 1.36e-139 396
MsG0180003601.01.T01 MTR_1g066390 92.763 152 11 0 204 355 1 152 8.47e-91 272
MsG0180003601.01.T01 MTR_7g116360 94.836 213 11 0 143 355 16 228 5.41e-139 394
MsG0180003601.01.T01 MTR_7g116360 92.763 152 11 0 204 355 1 152 5.46e-91 272
MsG0180003601.01.T01 MTR_8g018230 94.836 213 11 0 143 355 16 228 2.25e-138 394
MsG0180003601.01.T01 MTR_8g018230 78.873 213 10 1 143 355 92 269 2.35e-106 313
MsG0180003601.01.T01 MTR_8g018230 92.763 152 11 0 204 355 1 152 2.47e-90 272
MsG0180003601.01.T01 MTR_7g116360 94.836 213 11 0 143 355 64 276 4.14e-138 394
MsG0180003601.01.T01 MTR_7g116360 92.763 152 11 0 204 355 49 200 3.50e-90 272
MsG0180003601.01.T01 MTR_4g081010 94.836 213 11 0 143 355 16 228 7.49e-138 394
MsG0180003601.01.T01 MTR_4g081010 94.836 213 11 0 143 355 92 304 7.49e-138 394
MsG0180003601.01.T01 MTR_4g081010 92.763 152 11 0 204 355 1 152 6.13e-90 272
MsG0180003601.01.T01 MTR_4g081010 94.836 213 11 0 143 355 16 228 1.32e-137 392
MsG0180003601.01.T01 MTR_4g081010 81.500 200 7 1 143 342 92 261 8.70e-104 306
MsG0180003601.01.T01 MTR_4g081010 92.763 152 11 0 204 355 1 152 1.08e-89 271
MsG0180003601.01.T01 MTR_8g081020 94.836 213 11 0 143 355 16 228 8.75e-137 394
MsG0180003601.01.T01 MTR_8g081020 94.836 213 11 0 143 355 92 304 8.75e-137 394
MsG0180003601.01.T01 MTR_8g081020 94.836 213 11 0 143 355 168 380 8.75e-137 394
MsG0180003601.01.T01 MTR_8g081020 92.763 152 11 0 204 355 1 152 5.91e-89 273
MsG0180003601.01.T01 MTR_4g081010 94.836 213 11 0 143 355 16 228 8.85e-137 394
MsG0180003601.01.T01 MTR_4g081010 94.836 213 11 0 143 355 92 304 8.85e-137 394
MsG0180003601.01.T01 MTR_4g081010 94.836 213 11 0 143 355 168 380 8.85e-137 394
MsG0180003601.01.T01 MTR_4g081010 92.763 152 11 0 204 355 1 152 5.98e-89 273
MsG0180003601.01.T01 MTR_4g080797 94.836 213 11 0 143 355 16 228 9.76e-137 394
MsG0180003601.01.T01 MTR_4g080797 94.836 213 11 0 143 355 92 304 9.76e-137 394
MsG0180003601.01.T01 MTR_4g080797 94.836 213 11 0 143 355 168 380 9.76e-137 394
MsG0180003601.01.T01 MTR_4g080797 92.763 152 11 0 204 355 1 152 6.59e-89 272
MsG0180003601.01.T01 MTR_4g091580 94.836 213 11 0 143 355 16 228 9.76e-137 394
MsG0180003601.01.T01 MTR_4g091580 94.836 213 11 0 143 355 92 304 1.51e-136 394
MsG0180003601.01.T01 MTR_4g091580 94.366 213 12 0 143 355 168 380 3.07e-136 393
MsG0180003601.01.T01 MTR_4g091580 92.763 152 11 0 204 355 1 152 6.59e-89 272
MsG0180003601.01.T01 MTR_8g018230 94.836 213 11 0 143 355 16 228 9.76e-137 394
MsG0180003601.01.T01 MTR_8g018230 94.836 213 11 0 143 355 92 304 9.76e-137 394
MsG0180003601.01.T01 MTR_8g018230 94.836 213 11 0 143 355 168 380 9.76e-137 394
MsG0180003601.01.T01 MTR_8g018230 92.763 152 11 0 204 355 1 152 6.59e-89 272
MsG0180003601.01.T01 MTR_8g018230 94.836 213 11 0 143 355 16 228 1.15e-135 394
MsG0180003601.01.T01 MTR_8g018230 94.836 213 11 0 143 355 92 304 1.15e-135 394
MsG0180003601.01.T01 MTR_8g018230 94.836 213 11 0 143 355 168 380 1.15e-135 394
MsG0180003601.01.T01 MTR_8g018230 94.836 213 11 0 143 355 244 456 1.15e-135 394
MsG0180003601.01.T01 MTR_8g018230 92.763 152 11 0 204 355 1 152 5.75e-88 272
MsG0180003601.01.T01 MTR_8g018230 94.836 213 11 0 143 355 16 228 1.15e-135 394
MsG0180003601.01.T01 MTR_8g018230 94.836 213 11 0 143 355 92 304 1.15e-135 394
MsG0180003601.01.T01 MTR_8g018230 94.836 213 11 0 143 355 168 380 1.15e-135 394
MsG0180003601.01.T01 MTR_8g018230 94.836 213 11 0 143 355 244 456 1.15e-135 394
MsG0180003601.01.T01 MTR_8g018230 92.763 152 11 0 204 355 1 152 5.75e-88 272
MsG0180003601.01.T01 MTR_4g081010 94.836 213 11 0 143 355 16 228 1.08e-134 394
MsG0180003601.01.T01 MTR_4g081010 94.836 213 11 0 143 355 92 304 1.08e-134 394
MsG0180003601.01.T01 MTR_4g081010 94.836 213 11 0 143 355 168 380 1.08e-134 394
MsG0180003601.01.T01 MTR_4g081010 94.836 213 11 0 143 355 244 456 1.08e-134 394
MsG0180003601.01.T01 MTR_4g081010 94.836 213 11 0 143 355 320 532 1.08e-134 394
MsG0180003601.01.T01 MTR_4g081010 92.763 152 11 0 204 355 1 152 3.86e-87 273
MsG0180003601.01.T01 MTR_8g018230 94.836 213 11 0 143 355 16 228 1.10e-134 394
MsG0180003601.01.T01 MTR_8g018230 94.836 213 11 0 143 355 92 304 1.10e-134 394
MsG0180003601.01.T01 MTR_8g018230 94.836 213 11 0 143 355 168 380 1.10e-134 394
MsG0180003601.01.T01 MTR_8g018230 94.836 213 11 0 143 355 244 456 1.10e-134 394
MsG0180003601.01.T01 MTR_8g018230 94.836 213 11 0 143 355 320 532 1.10e-134 394
MsG0180003601.01.T01 MTR_8g018230 92.763 152 11 0 204 355 1 152 3.98e-87 273
MsG0180003601.01.T01 MTR_4g091580 94.836 213 11 0 143 355 16 228 1.44e-134 394
MsG0180003601.01.T01 MTR_4g091580 94.836 213 11 0 143 355 92 304 1.44e-134 394
MsG0180003601.01.T01 MTR_4g091580 94.366 213 12 0 143 355 168 380 3.51e-133 390
MsG0180003601.01.T01 MTR_4g091580 93.897 213 13 0 143 355 244 456 7.12e-133 390
MsG0180003601.01.T01 MTR_4g091580 93.897 213 13 0 143 355 320 532 7.12e-133 390
MsG0180003601.01.T01 MTR_4g091580 92.763 152 11 0 204 355 1 152 4.94e-87 272
MsG0180003601.01.T01 MTR_4g088495 94.836 213 11 0 143 355 92 304 4.41e-131 395
MsG0180003601.01.T01 MTR_4g088495 94.836 213 11 0 143 355 168 380 4.41e-131 395
MsG0180003601.01.T01 MTR_4g088495 94.836 213 11 0 143 355 244 456 4.41e-131 395
MsG0180003601.01.T01 MTR_4g088495 94.836 213 11 0 143 355 320 532 4.41e-131 395
MsG0180003601.01.T01 MTR_4g088495 94.836 213 11 0 143 355 396 608 4.41e-131 395
MsG0180003601.01.T01 MTR_4g088495 94.836 213 11 0 143 355 472 684 4.41e-131 395
MsG0180003601.01.T01 MTR_4g088495 94.836 213 11 0 143 355 548 760 4.41e-131 395
MsG0180003601.01.T01 MTR_4g088495 94.836 213 11 0 143 355 624 836 4.41e-131 395
MsG0180003601.01.T01 MTR_4g088495 94.366 213 12 0 143 355 16 228 9.26e-130 391
MsG0180003601.01.T01 MTR_4g088495 92.105 152 12 0 204 355 1 152 4.42e-83 269
MsG0180003601.01.T01 MTR_4g080920 85.047 214 32 0 143 356 16 229 2.51e-124 357
MsG0180003601.01.T01 MTR_4g080920 92.105 152 12 0 204 355 1 152 5.74e-90 270
MsG0180003601.01.T01 MTR_4g088485 87.793 213 11 1 143 355 16 213 9.24e-124 355
MsG0180003601.01.T01 MTR_4g088485 82.895 152 11 1 204 355 1 137 5.45e-76 233
MsG0180003601.01.T01 MTR_6g061930 86.854 213 13 1 143 355 16 213 5.34e-121 351
MsG0180003601.01.T01 MTR_6g061930 86.854 213 13 1 143 355 92 289 5.34e-121 351
MsG0180003601.01.T01 MTR_6g061930 92.763 152 11 0 204 355 1 152 8.62e-90 271
MsG0180003601.01.T01 MTR_8g479250 83.516 182 19 1 170 351 107 277 5.14e-87 265
MsG0180003601.01.T01 MTR_8g479250 86.466 133 7 1 143 275 156 277 2.82e-69 219
MsG0180003601.01.T01 MTR_8g479250 58.222 225 58 5 143 355 16 216 6.30e-59 192
MsG0180003601.01.T01 MTR_8g479250 43.902 164 56 5 204 355 1 140 1.80e-22 96.3
MsG0180003601.01.T01 MTR_5g092700 76.974 152 35 0 204 355 1 152 6.24e-74 226
MsG0180003601.01.T01 MTR_5g092700 78.102 137 30 0 143 279 16 152 2.55e-70 217
MsG0180003601.01.T01 MTR_4g073580 76.974 152 35 0 204 355 1 152 6.24e-74 226
MsG0180003601.01.T01 MTR_4g073580 78.102 137 30 0 143 279 16 152 2.55e-70 217
MsG0180003601.01.T01 MTR_1g066380 61.735 196 19 3 3 142 49 244 1.21e-72 226
MsG0180003601.01.T01 MTR_1g066380 61.735 196 19 3 3 142 117 312 6.74e-72 227
MsG0180003601.01.T01 MTR_1g066640 63.265 196 16 4 3 142 117 312 2.20e-71 226
MsG0180003601.01.T01 MTR_4g073580 64.286 182 35 1 204 355 1 182 3.82e-67 210
MsG0180003601.01.T01 MTR_4g073580 64.072 167 30 1 143 279 16 182 9.54e-64 201
MsG0180003601.01.T01 MTR_1g066710 60.714 196 21 4 3 142 117 312 5.85e-66 211
MsG0180003601.01.T01 MTR_1g066680 86.538 104 14 0 39 142 208 311 1.25e-60 198
MsG0180003601.01.T01 MTR_3g092130 98.701 77 1 0 204 280 1 77 5.38e-47 156
MsG0180003601.01.T01 MTR_3g092130 98.387 62 1 0 143 204 16 77 4.46e-36 128
MsG0180003601.01.T01 MTR_3g092130 85.526 76 11 0 280 355 1 76 1.76e-34 124
MsG0180003601.01.T01 MTR_7g105080 98.701 77 1 0 204 280 1 77 9.30e-47 155
MsG0180003601.01.T01 MTR_7g105080 98.387 62 1 0 143 204 16 77 7.58e-36 127
MsG0180003601.01.T01 MTR_7g105080 85.526 76 11 0 280 355 1 76 1.70e-34 124
MsG0180003601.01.T01 MTR_3g092130 98.701 77 1 0 204 280 1 77 9.30e-47 155
MsG0180003601.01.T01 MTR_3g092130 98.387 62 1 0 143 204 16 77 7.58e-36 127
MsG0180003601.01.T01 MTR_3g092130 85.526 76 11 0 280 355 1 76 1.70e-34 124
MsG0180003601.01.T01 MTR_1g059690 98.701 77 1 0 204 280 1 77 9.30e-47 155
MsG0180003601.01.T01 MTR_1g059690 98.387 62 1 0 143 204 16 77 7.58e-36 127
MsG0180003601.01.T01 MTR_1g059690 85.526 76 11 0 280 355 1 76 1.70e-34 124
MsG0180003601.01.T01 MTR_8g088060 97.436 78 2 0 204 281 1 78 2.11e-46 155
MsG0180003601.01.T01 MTR_8g088060 96.825 63 2 0 143 205 16 78 1.62e-35 127
MsG0180003601.01.T01 MTR_8g088060 84.416 77 12 0 280 356 1 77 2.02e-34 124
MsG0180003601.01.T01 MTR_5g033960 97.436 78 2 0 204 281 1 78 2.15e-46 155
MsG0180003601.01.T01 MTR_5g033960 96.825 63 2 0 143 205 16 78 1.65e-35 127
MsG0180003601.01.T01 MTR_5g033960 84.416 77 12 0 280 356 1 77 2.12e-34 124
MsG0180003601.01.T01 MTR_4g132110 59.130 115 46 1 39 152 214 328 8.55e-41 146
MsG0180003601.01.T01 MTR_4g132110 59.130 115 46 1 39 152 219 333 9.07e-41 146
MsG0180003601.01.T01 MTR_1g046640 71.053 76 22 0 204 279 240 315 2.68e-26 107
MsG0180003601.01.T01 MTR_1g046640 75.000 60 15 0 144 203 256 315 1.01e-19 89.0
MsG0180003601.01.T01 MTR_1g046640 57.895 76 32 0 280 355 240 315 4.21e-16 78.6
MsG0180003601.01.T01 MTR_5g076810 68.831 77 23 1 204 279 194 270 2.31e-25 103
MsG0180003601.01.T01 MTR_5g076810 68.852 61 18 1 144 203 210 270 4.01e-18 83.6
MsG0180003601.01.T01 MTR_5g076810 58.442 77 31 1 280 355 194 270 1.37e-16 79.3
MsG0180003601.01.T01 MTR_5g076660 63.855 83 30 0 194 276 256 338 2.70e-25 105
MsG0180003601.01.T01 MTR_5g076660 55.422 83 37 0 270 352 256 338 5.62e-17 81.3
MsG0180003601.01.T01 MTR_5g076660 65.517 58 20 0 143 200 281 338 5.71e-16 78.6
MsG0180003601.01.T01 MTR_5g061310 60.000 75 30 0 204 278 2 76 3.86e-23 92.0
MsG0180003601.01.T01 MTR_5g061310 62.712 59 22 0 144 202 18 76 8.09e-18 77.4
MsG0180003601.01.T01 MTR_5g061310 50.667 75 37 0 280 354 2 76 5.96e-14 67.0
MsG0180003601.01.T01 MTR_5g067400 68.421 76 24 0 204 279 241 316 6.26e-23 97.8
MsG0180003601.01.T01 MTR_5g067400 70.000 60 18 0 144 203 257 316 1.89e-16 79.3
MsG0180003601.01.T01 MTR_5g067400 57.895 76 32 0 280 355 241 316 8.42e-15 74.7
MsG0180003601.01.T01 MTR_5g076370 59.036 83 34 0 194 276 257 339 2.15e-21 94.0
MsG0180003601.01.T01 MTR_5g076370 68.966 58 18 0 143 200 282 339 8.55e-17 80.9
MsG0180003601.01.T01 MTR_5g076370 50.602 83 41 0 270 352 257 339 2.52e-14 73.6
MsG0180003601.01.T01 MTR_5g076505 61.333 75 29 0 204 278 240 314 8.53e-21 92.0
MsG0180003601.01.T01 MTR_5g076505 67.797 59 19 0 144 202 256 314 9.96e-17 80.5
MsG0180003601.01.T01 MTR_5g076505 50.667 75 37 0 280 354 240 314 5.21e-13 69.3
MsG0180003601.01.T01 MTR_2g038430 61.333 75 29 0 204 278 268 342 1.57e-20 91.7
MsG0180003601.01.T01 MTR_2g038430 55.714 70 28 1 136 202 273 342 5.03e-14 72.8
MsG0180003601.01.T01 MTR_2g038430 49.333 75 38 0 280 354 268 342 7.42e-11 63.2
MsG0180003601.01.T01 MTR_1g046650 57.895 76 32 0 204 279 171 246 2.45e-20 89.4
MsG0180003601.01.T01 MTR_1g046650 65.000 60 21 0 144 203 187 246 4.21e-17 80.1
MsG0180003601.01.T01 MTR_1g046650 50.000 76 38 0 280 355 171 246 2.05e-13 69.7
MsG0180003601.01.T01 MTR_5g076720 65.333 75 26 0 204 278 315 389 2.63e-20 91.7
MsG0180003601.01.T01 MTR_5g076720 61.667 60 23 0 143 202 330 389 2.45e-13 70.9
MsG0180003601.01.T01 MTR_5g076720 57.333 75 32 0 280 354 315 389 1.25e-12 68.9
MsG0180003601.01.T01 MTR_1g046650 57.895 76 32 0 204 279 240 315 4.43e-20 89.7
MsG0180003601.01.T01 MTR_1g046650 65.000 60 21 0 144 203 256 315 6.06e-17 80.9
MsG0180003601.01.T01 MTR_1g046650 50.000 76 38 0 280 355 240 315 3.98e-13 69.7
MsG0180003601.01.T01 MTR_1g046650 57.895 76 32 0 204 279 240 315 6.35e-20 89.4
MsG0180003601.01.T01 MTR_1g046650 65.000 60 21 0 144 203 256 315 9.23e-17 80.5
MsG0180003601.01.T01 MTR_1g046650 50.000 76 38 0 280 355 240 315 3.76e-13 69.7
MsG0180003601.01.T01 MTR_5g076740 57.692 78 32 1 202 278 84 161 6.81e-20 85.9
MsG0180003601.01.T01 MTR_5g076740 64.407 59 21 0 144 202 103 161 1.10e-16 77.0
MsG0180003601.01.T01 MTR_5g076740 48.148 81 41 1 278 357 84 164 6.54e-13 66.6
MsG0180003601.01.T01 MTR_1g046650 57.895 76 32 0 204 279 271 346 8.61e-20 89.7
MsG0180003601.01.T01 MTR_1g046650 65.000 60 21 0 144 203 287 346 1.13e-16 80.5
MsG0180003601.01.T01 MTR_1g046650 50.000 76 38 0 280 355 271 346 5.21e-13 69.7
MsG0180003601.01.T01 MTR_2g038420 60.000 75 30 0 204 278 260 334 1.15e-19 89.0
MsG0180003601.01.T01 MTR_2g038420 56.667 60 26 0 143 202 275 334 1.57e-12 68.2
MsG0180003601.01.T01 MTR_2g038420 50.667 75 37 0 280 354 260 334 2.38e-12 67.8
MsG0180003601.01.T01 MTR_4g080783 53.409 88 11 1 171 228 7 94 1.27e-19 83.2
MsG0180003601.01.T01 MTR_4g080783 53.409 88 11 1 247 304 7 94 1.27e-19 83.2
MsG0180003601.01.T01 MTR_7g094390 54.118 85 39 0 194 278 392 476 1.21e-18 87.4
MsG0180003601.01.T01 MTR_7g094390 61.017 59 23 0 144 202 418 476 2.46e-14 74.3
MsG0180003601.01.T01 MTR_7g094390 48.235 85 44 0 270 354 392 476 1.34e-12 68.9
MsG0180003601.01.T01 MTR_5g076520 57.333 75 31 1 204 277 244 318 2.07e-17 82.4
MsG0180003601.01.T01 MTR_5g076520 42.975 121 62 3 83 201 203 318 9.29e-16 77.4
MsG0180003601.01.T01 MTR_7g024290 60.526 76 29 1 204 278 241 316 5.96e-17 80.9
MsG0180003601.01.T01 MTR_7g024290 61.667 60 22 1 144 202 257 316 1.50e-11 65.1
MsG0180003601.01.T01 MTR_6g043280 34.014 147 85 5 9 154 199 334 3.84e-16 79.0
MsG0180003601.01.T01 MTR_5g061290 53.333 75 35 0 204 278 252 326 4.74e-16 78.6
MsG0180003601.01.T01 MTR_4g009980 55.224 67 30 0 212 278 4 70 5.52e-16 72.4
MsG0180003601.01.T01 MTR_4g009980 56.667 60 26 0 143 202 11 70 3.16e-14 67.4
MsG0180003601.01.T01 MTR_4g132490 44.444 90 48 2 53 142 229 316 2.43e-15 76.3
MsG0180003601.01.T01 MTR_5g021060 43.137 102 54 2 42 142 221 319 1.21e-14 74.3
MsG0180003601.01.T01 MTR_8g027610 34.783 138 79 5 147 277 56 189 2.46e-14 74.7
MsG0180003601.01.T01 MTR_8g027610 31.707 164 106 5 194 353 28 189 4.85e-14 73.6
MsG0180003601.01.T01 MTR_2g088760 28.182 220 129 6 143 334 15 233 2.78e-14 72.4
MsG0180003601.01.T01 MTR_3g091400 34.586 133 84 3 147 276 45 177 4.15e-14 73.9
MsG0180003601.01.T01 MTR_6g043240 35.075 134 76 3 9 142 198 320 5.39e-14 72.8
MsG0180003601.01.T01 MTR_7g117395 28.426 197 131 5 89 279 1 193 8.96e-14 72.8
MsG0180003601.01.T01 MTR_7g117395 31.646 158 101 5 204 355 37 193 6.25e-13 70.1
MsG0180003601.01.T01 MTR_1g090760 40.566 106 60 2 42 146 221 324 8.98e-14 72.0
MsG0180003601.01.T01 MTR_6g043460 32.374 139 81 4 28 157 200 334 2.07e-13 70.9
MsG0180003601.01.T01 MTR_5g076780 58.333 60 25 0 218 277 4 63 2.20e-13 65.1
MsG0180003601.01.T01 MTR_5g076780 58.621 58 24 0 144 201 6 63 4.45e-13 63.9
MsG0180003601.01.T01 MTR_5g076760 59.649 57 23 0 214 270 5 61 2.31e-13 65.5
MsG0180003601.01.T01 MTR_5g076760 62.745 51 19 0 144 194 11 61 8.44e-13 63.9
MsG0180003601.01.T01 MTR_4g095450 38.710 124 67 4 9 132 189 303 5.04e-13 69.7
MsG0180003601.01.T01 MTR_7g029030 37.037 135 75 5 9 142 184 309 1.15e-12 68.6
MsG0180003601.01.T01 MTR_5g016010 37.903 124 73 3 9 132 189 308 1.32e-12 68.2
MsG0180003601.01.T01 MTR_5g076350 50.000 74 36 1 204 276 8 81 1.35e-12 63.2
MsG0180003601.01.T01 MTR_5g076340 52.000 75 34 2 204 276 9 83 2.52e-12 62.8
MsG0180003601.01.T01 MTR_8g076820 39.423 104 55 3 42 142 221 319 9.76e-12 65.9
MsG0180003601.01.T01 MTR_8g062780 32.000 150 95 5 9 155 183 328 1.27e-11 65.5
MsG0180003601.01.T01 MTR_1g101830 32.283 127 70 4 9 129 184 300 1.70e-11 65.1
MsG0180003601.01.T01 MTR_8g099565 31.111 135 90 3 144 275 42 176 4.22e-11 64.7
MsG0180003601.01.T01 MTR_3g092990 34.821 112 69 2 30 141 196 303 6.33e-11 63.2
MsG0180003601.01.T01 MTR_3g092990 32.090 134 86 3 9 141 185 314 6.46e-11 63.2
MsG0180003601.01.T01 MTR_2g437770 32.432 148 90 4 9 155 204 342 7.69e-11 63.2
MsG0180003601.01.T02 MTR_1g066380 100.000 50 0 0 51 100 23 72 5.11e-31 111
MsG0180003601.01.T02 MTR_1g066710 86.000 50 7 0 51 100 23 72 9.78e-27 100
MsG0180003601.01.T02 MTR_1g066680 78.000 50 10 1 50 99 22 70 1.58e-21 86.7
MsG0180003601.01.T02 MTR_1g066640 62.626 99 9 1 1 99 1 71 2.22e-19 80.9
MsG0180003601.01.T02 MTR_4g132110 44.211 95 34 2 6 100 2 77 6.82e-18 77.0
MsG0180003601.01.T02 MTR_4g132110 44.211 95 34 2 6 100 2 77 7.66e-18 76.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180003601.01.T01 AT4G05050 94.836 213 11 0 143 355 16 228 5.67e-139 394
MsG0180003601.01.T01 AT4G05050 92.763 152 11 0 204 355 1 152 5.72e-91 272
MsG0180003601.01.T01 AT4G05050 94.836 213 11 0 143 355 16 228 5.67e-139 394
MsG0180003601.01.T01 AT4G05050 92.763 152 11 0 204 355 1 152 5.72e-91 272
MsG0180003601.01.T01 AT4G05050 94.836 213 11 0 143 355 16 228 5.67e-139 394
MsG0180003601.01.T01 AT4G05050 92.763 152 11 0 204 355 1 152 5.72e-91 272
MsG0180003601.01.T01 AT4G02890 94.836 213 11 0 143 355 16 228 5.67e-139 394
MsG0180003601.01.T01 AT4G02890 92.763 152 11 0 204 355 1 152 5.72e-91 272
MsG0180003601.01.T01 AT4G02890 94.836 213 11 0 143 355 16 228 5.67e-139 394
MsG0180003601.01.T01 AT4G02890 92.763 152 11 0 204 355 1 152 5.72e-91 272
MsG0180003601.01.T01 AT5G03240 94.836 213 11 0 143 355 16 228 6.67e-138 394
MsG0180003601.01.T01 AT5G03240 94.836 213 11 0 143 355 92 304 6.67e-138 394
MsG0180003601.01.T01 AT5G03240 92.763 152 11 0 204 355 1 152 6.02e-90 273
MsG0180003601.01.T01 AT5G03240 94.836 213 11 0 143 355 16 228 6.67e-138 394
MsG0180003601.01.T01 AT5G03240 94.836 213 11 0 143 355 92 304 6.67e-138 394
MsG0180003601.01.T01 AT5G03240 92.763 152 11 0 204 355 1 152 6.02e-90 273
MsG0180003601.01.T01 AT5G03240 94.836 213 11 0 143 355 16 228 6.67e-138 394
MsG0180003601.01.T01 AT5G03240 94.836 213 11 0 143 355 92 304 6.67e-138 394
MsG0180003601.01.T01 AT5G03240 92.763 152 11 0 204 355 1 152 6.02e-90 273
MsG0180003601.01.T01 AT5G20620 94.836 213 11 0 143 355 16 228 6.67e-138 394
MsG0180003601.01.T01 AT5G20620 94.836 213 11 0 143 355 92 304 6.67e-138 394
MsG0180003601.01.T01 AT5G20620 92.763 152 11 0 204 355 1 152 6.02e-90 273
MsG0180003601.01.T01 AT4G05320 94.836 213 11 0 143 355 16 228 7.93e-138 394
MsG0180003601.01.T01 AT4G05320 94.836 213 11 0 143 355 92 304 7.93e-138 394
MsG0180003601.01.T01 AT4G05320 92.763 152 11 0 204 355 1 152 6.71e-90 272
MsG0180003601.01.T01 AT4G05320 94.836 213 11 0 143 355 16 228 7.93e-138 394
MsG0180003601.01.T01 AT4G05320 94.836 213 11 0 143 355 92 304 7.93e-138 394
MsG0180003601.01.T01 AT4G05320 92.763 152 11 0 204 355 1 152 6.71e-90 272
MsG0180003601.01.T01 AT4G02890 94.836 213 11 0 143 355 16 228 7.93e-138 394
MsG0180003601.01.T01 AT4G02890 94.836 213 11 0 143 355 92 304 7.93e-138 394
MsG0180003601.01.T01 AT4G02890 92.763 152 11 0 204 355 1 152 6.71e-90 272
MsG0180003601.01.T01 AT4G02890 94.836 213 11 0 143 355 16 228 7.93e-138 394
MsG0180003601.01.T01 AT4G02890 94.836 213 11 0 143 355 92 304 7.93e-138 394
MsG0180003601.01.T01 AT4G02890 92.763 152 11 0 204 355 1 152 6.71e-90 272
MsG0180003601.01.T01 AT4G05320 94.836 213 11 0 143 355 16 228 1.02e-136 394
MsG0180003601.01.T01 AT4G05320 94.836 213 11 0 143 355 92 304 1.02e-136 394
MsG0180003601.01.T01 AT4G05320 94.836 213 11 0 143 355 168 380 1.02e-136 394
MsG0180003601.01.T01 AT4G05320 92.763 152 11 0 204 355 1 152 6.90e-89 272
MsG0180003601.01.T01 AT4G05320 94.836 213 11 0 143 355 16 228 1.02e-136 394
MsG0180003601.01.T01 AT4G05320 94.836 213 11 0 143 355 92 304 1.02e-136 394
MsG0180003601.01.T01 AT4G05320 94.836 213 11 0 143 355 168 380 1.02e-136 394
MsG0180003601.01.T01 AT4G05320 92.763 152 11 0 204 355 1 152 6.90e-89 272
MsG0180003601.01.T01 AT4G05320 94.836 213 11 0 143 355 16 228 1.02e-136 394
MsG0180003601.01.T01 AT4G05320 94.836 213 11 0 143 355 92 304 1.02e-136 394
MsG0180003601.01.T01 AT4G05320 94.836 213 11 0 143 355 168 380 1.02e-136 394
MsG0180003601.01.T01 AT4G05320 92.763 152 11 0 204 355 1 152 6.90e-89 272
MsG0180003601.01.T01 AT5G20620 94.836 213 11 0 143 355 16 228 1.02e-136 394
MsG0180003601.01.T01 AT5G20620 94.836 213 11 0 143 355 92 304 1.02e-136 394
MsG0180003601.01.T01 AT5G20620 94.836 213 11 0 143 355 168 380 1.02e-136 394
MsG0180003601.01.T01 AT5G20620 92.763 152 11 0 204 355 1 152 6.88e-89 272
MsG0180003601.01.T01 AT4G05320 94.836 213 11 0 143 355 16 228 1.20e-135 394
MsG0180003601.01.T01 AT4G05320 94.836 213 11 0 143 355 92 304 1.20e-135 394
MsG0180003601.01.T01 AT4G05320 94.836 213 11 0 143 355 168 380 1.20e-135 394
MsG0180003601.01.T01 AT4G05320 94.836 213 11 0 143 355 244 456 1.20e-135 394
MsG0180003601.01.T01 AT4G05320 92.763 152 11 0 204 355 1 152 6.02e-88 272
MsG0180003601.01.T01 AT4G05320 94.836 213 11 0 143 355 16 228 1.20e-135 394
MsG0180003601.01.T01 AT4G05320 94.836 213 11 0 143 355 92 304 1.20e-135 394
MsG0180003601.01.T01 AT4G05320 94.836 213 11 0 143 355 168 380 1.20e-135 394
MsG0180003601.01.T01 AT4G05320 94.836 213 11 0 143 355 244 456 1.20e-135 394
MsG0180003601.01.T01 AT4G05320 92.763 152 11 0 204 355 1 152 6.02e-88 272
MsG0180003601.01.T01 AT1G65350 93.897 213 12 1 143 355 16 227 1.77e-133 384
MsG0180003601.01.T01 AT1G65350 88.106 227 12 3 143 355 92 317 4.59e-131 377
MsG0180003601.01.T01 AT1G65350 93.421 152 9 1 204 355 1 151 3.59e-90 273
MsG0180003601.01.T01 AT1G55060 90.141 213 21 0 143 355 16 228 6.73e-132 376
MsG0180003601.01.T01 AT1G55060 85.526 152 22 0 204 355 1 152 8.09e-84 254
MsG0180003601.01.T01 AT5G37640 88.837 215 21 2 143 355 94 307 7.01e-128 370
MsG0180003601.01.T01 AT5G37640 85.915 213 30 0 143 355 18 230 2.92e-122 355
MsG0180003601.01.T01 AT5G37640 81.579 152 28 0 204 355 3 154 1.52e-75 236
MsG0180003601.01.T01 AT3G09790 78.995 219 39 2 143 354 18 236 1.10e-106 326
MsG0180003601.01.T01 AT3G09790 71.111 225 53 3 143 355 94 318 5.49e-91 285
MsG0180003601.01.T01 AT3G09790 68.807 218 61 1 143 353 408 625 8.91e-85 269
MsG0180003601.01.T01 AT3G09790 68.664 217 59 3 143 350 175 391 3.31e-82 263
MsG0180003601.01.T01 AT3G09790 66.667 222 61 3 143 355 334 551 1.42e-81 261
MsG0180003601.01.T01 AT3G09790 82.237 152 27 0 204 355 3 154 1.04e-71 235
MsG0180003601.01.T01 AT3G09790 78.995 219 39 2 143 354 18 236 1.10e-106 326
MsG0180003601.01.T01 AT3G09790 71.111 225 53 3 143 355 94 318 5.49e-91 285
MsG0180003601.01.T01 AT3G09790 68.807 218 61 1 143 353 408 625 8.91e-85 269
MsG0180003601.01.T01 AT3G09790 68.664 217 59 3 143 350 175 391 3.31e-82 263
MsG0180003601.01.T01 AT3G09790 66.667 222 61 3 143 355 334 551 1.42e-81 261
MsG0180003601.01.T01 AT3G09790 82.237 152 27 0 204 355 3 154 1.04e-71 235
MsG0180003601.01.T01 AT4G05050 99.275 138 1 0 143 280 16 153 2.18e-93 276
MsG0180003601.01.T01 AT4G05050 92.763 152 11 0 204 355 1 152 7.20e-92 272
MsG0180003601.01.T01 AT4G05320 99.275 138 1 0 143 280 16 153 2.18e-93 276
MsG0180003601.01.T01 AT4G05320 92.763 152 11 0 204 355 1 152 7.20e-92 272
MsG0180003601.01.T01 AT2G35635 76.974 152 35 0 204 355 1 152 5.44e-74 226
MsG0180003601.01.T01 AT2G35635 77.536 138 31 0 143 280 16 153 4.49e-70 216
MsG0180003601.01.T01 AT1G31340 76.974 152 35 0 204 355 1 152 1.84e-73 225
MsG0180003601.01.T01 AT1G31340 76.596 141 33 0 143 283 16 156 6.81e-71 218
MsG0180003601.01.T01 AT2G37130 49.490 196 42 3 4 142 90 285 2.64e-53 178
MsG0180003601.01.T01 AT2G37130 49.490 196 42 3 4 142 121 316 6.99e-53 178
MsG0180003601.01.T01 AT3G52590 98.701 77 1 0 204 280 1 77 9.53e-47 155
MsG0180003601.01.T01 AT3G52590 98.387 62 1 0 143 204 16 77 7.53e-36 127
MsG0180003601.01.T01 AT3G52590 85.526 76 11 0 280 355 1 76 2.15e-34 123
MsG0180003601.01.T01 AT2G36170 98.701 77 1 0 204 280 1 77 9.53e-47 155
MsG0180003601.01.T01 AT2G36170 98.387 62 1 0 143 204 16 77 7.53e-36 127
MsG0180003601.01.T01 AT2G36170 85.526 76 11 0 280 355 1 76 2.15e-34 123
MsG0180003601.01.T01 AT2G47110 97.436 78 2 0 204 281 1 78 2.00e-46 155
MsG0180003601.01.T01 AT2G47110 96.825 63 2 0 143 205 16 78 1.47e-35 127
MsG0180003601.01.T01 AT2G47110 85.526 76 11 0 280 355 1 76 3.38e-34 124
MsG0180003601.01.T01 AT2G47110 97.436 78 2 0 204 281 1 78 2.00e-46 155
MsG0180003601.01.T01 AT2G47110 96.825 63 2 0 143 205 16 78 1.47e-35 127
MsG0180003601.01.T01 AT2G47110 85.526 76 11 0 280 355 1 76 3.38e-34 124
MsG0180003601.01.T01 AT3G62250 97.436 78 2 0 204 281 1 78 2.04e-46 155
MsG0180003601.01.T01 AT3G62250 96.825 63 2 0 143 205 16 78 1.44e-35 127
MsG0180003601.01.T01 AT3G62250 85.526 76 11 0 280 355 1 76 3.95e-34 124
MsG0180003601.01.T01 AT1G23410 100.000 76 0 0 204 279 1 76 3.93e-46 155
MsG0180003601.01.T01 AT1G23410 100.000 61 0 0 143 203 16 76 2.47e-35 127
MsG0180003601.01.T01 AT1G23410 84.416 77 12 0 280 356 1 77 2.92e-34 124
MsG0180003601.01.T01 AT4G21960 61.538 104 40 0 39 142 213 316 2.01e-40 145
MsG0180003601.01.T01 AT1G53930 48.718 156 51 6 143 276 10 158 4.18e-31 115
MsG0180003601.01.T01 AT1G53930 43.976 166 61 9 211 352 1 158 1.80e-22 92.8
MsG0180003601.01.T01 AT1G53950 49.541 109 49 1 176 278 35 143 1.10e-24 98.6
MsG0180003601.01.T01 AT1G53950 37.805 164 61 3 198 354 14 143 6.58e-18 80.1
MsG0180003601.01.T01 AT1G53950 56.250 64 28 0 139 202 80 143 3.15e-16 75.5
MsG0180003601.01.T01 AT1G11980 55.263 76 34 0 204 279 1 76 3.98e-22 89.4
MsG0180003601.01.T01 AT1G11980 53.968 63 29 0 141 203 14 76 1.95e-17 76.6
MsG0180003601.01.T01 AT1G11980 50.000 76 38 0 280 355 1 76 4.75e-16 72.8
MsG0180003601.01.T01 AT4G08780 36.420 162 83 6 8 159 183 334 1.29e-19 89.0
MsG0180003601.01.T01 AT4G08770 35.185 162 85 6 8 159 183 334 7.98e-19 86.7
MsG0180003601.01.T01 AT2G46500 35.172 145 91 2 210 351 40 184 3.75e-18 85.5
MsG0180003601.01.T01 AT2G46500 35.556 135 84 2 144 275 50 184 7.82e-17 81.6
MsG0180003601.01.T01 AT2G46500 35.172 145 91 2 210 351 40 184 6.79e-18 85.5
MsG0180003601.01.T01 AT2G46500 35.556 135 84 2 144 275 50 184 1.00e-16 82.0
MsG0180003601.01.T01 AT2G46500 35.172 145 91 2 210 351 40 184 6.79e-18 85.5
MsG0180003601.01.T01 AT2G46500 35.556 135 84 2 144 275 50 184 1.00e-16 82.0
MsG0180003601.01.T01 AT1G71695 33.758 157 92 5 9 163 205 351 1.18e-15 77.8
MsG0180003601.01.T01 AT1G30870 35.507 138 79 4 9 144 205 334 1.41e-15 77.4
MsG0180003601.01.T01 AT3G49960 38.889 126 69 5 9 132 189 308 1.92e-14 73.9
MsG0180003601.01.T01 AT5G14130 33.813 139 85 3 5 142 228 360 1.95e-14 74.3
MsG0180003601.01.T01 AT5G14130 33.813 139 85 3 5 142 187 319 3.04e-14 73.2
MsG0180003601.01.T01 AT1G53945 42.268 97 54 1 176 270 16 112 3.95e-14 68.9
MsG0180003601.01.T01 AT5G17820 28.042 189 84 4 4 140 112 300 7.26e-14 72.0
MsG0180003601.01.T01 AT5G40150 36.765 136 78 3 5 140 188 315 9.70e-14 71.6
MsG0180003601.01.T01 AT3G17070 37.255 102 61 2 45 144 167 267 1.69e-13 70.5
MsG0180003601.01.T01 AT5G17820 28.042 189 84 4 4 140 165 353 2.27e-13 70.9
MsG0180003601.01.T01 AT3G17070 37.255 102 61 2 45 144 230 330 2.97e-13 70.5
MsG0180003601.01.T01 AT3G32980 34.028 144 76 5 8 142 190 323 6.14e-13 69.7
MsG0180003601.01.T01 AT5G24240 33.577 137 86 3 142 274 46 181 9.09e-13 69.7
MsG0180003601.01.T01 AT5G24240 32.414 145 93 3 210 350 38 181 6.89e-12 67.0
MsG0180003601.01.T01 AT5G24240 33.577 137 86 3 142 274 46 181 9.09e-13 69.7
MsG0180003601.01.T01 AT5G24240 32.414 145 93 3 210 350 38 181 6.89e-12 67.0
MsG0180003601.01.T01 AT3G49110 32.374 139 85 4 8 142 192 325 1.77e-12 68.2
MsG0180003601.01.T01 AT3G49120 33.333 144 77 5 8 142 191 324 3.17e-12 67.4
MsG0180003601.01.T01 AT4G17690 35.484 124 72 3 9 132 186 301 3.29e-12 67.0
MsG0180003601.01.T01 AT4G36430 32.836 134 83 5 9 140 189 317 7.57e-12 66.2
MsG0180003601.01.T01 AT4G30170 32.090 134 85 3 9 141 185 313 7.99e-12 65.9
MsG0180003601.01.T01 AT4G37530 36.585 123 62 5 9 125 189 301 8.99e-12 65.9
MsG0180003601.01.T01 AT1G34510 36.634 101 59 2 42 142 203 298 1.91e-11 64.7
MsG0180003601.01.T01 AT4G37520 36.220 127 65 5 5 125 182 298 2.57e-11 64.3
MsG0180003601.01.T01 AT4G37520 36.220 127 65 5 5 125 185 301 2.64e-11 64.3
MsG0180003601.01.T01 AT5G42180 34.559 136 73 4 5 134 176 301 3.38e-11 63.9
MsG0180003601.01.T01 AT5G64120 37.864 103 57 3 40 140 218 315 3.78e-11 63.9
MsG0180003601.01.T01 AT5G67400 36.290 124 75 3 9 132 189 308 6.71e-11 63.2
MsG0180003601.01.T02 AT2G37130 72.549 51 14 0 50 100 25 75 2.55e-23 91.3
MsG0180003601.01.T02 AT2G37130 77.273 44 10 0 57 100 1 44 9.76e-21 84.0
MsG0180003601.01.T02 AT4G21960 54.348 46 21 0 55 100 31 76 2.47e-15 69.7

Find 108 sgRNAs with CRISPR-Local

Find 424 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCTTCTTTGTCTTGAATTT+TGG 0.074900 1:-65032818 None:intergenic
GGTGAAGCGTGGACTCTTTC+TGG 0.156782 1:-65032918 None:intergenic
AATGAAGCGTACTCTCTTTC+TGG 0.174719 1:-65033146 None:intergenic
TTGATGATCTCTTCTGCTTT+TGG 0.187656 1:-65027127 None:intergenic
CAGACAGCAGAGAGAAGTTT+TGG 0.210178 1:+65027448 MsG0180003601.01.T01:five_prime_UTR
CTCACATATTCGACTGCTTT+TGG 0.217597 1:-65028934 None:intergenic
TGTCAGAAGATTCAACTTCT+AGG 0.245547 1:-65033005 None:intergenic
TTTACATAAGGTGATGTTCT+TGG 0.275851 1:-65029057 None:intergenic
ATCTTCGTCAAAACCTTAAC+AGG 0.292514 1:+65032970 MsG0180003601.01.T01:CDS
TTTCTCAAGAGCAGCTTTGA+TGG 0.295750 1:-65027496 None:intergenic
AAGAGTACATTGCATGAATT+TGG 0.303524 1:+65028823 MsG0180003601.01.T01:CDS
AGATTCAACTTCTAGGGTTA+TGG 0.327520 1:-65032998 None:intergenic
CAGCAACGATTGATCTTTGC+AGG 0.335770 1:+65033081 MsG0180003601.01.T01:CDS
TTGGATCTGGATTTGGTGTT+GGG 0.349451 1:-65028915 None:intergenic
CAGCAGCGATTGATCTTTGC+TGG 0.350825 1:+65033309 MsG0180003601.01.T01:CDS
ACATTTCAACTTGCTAGATA+TGG 0.362016 1:+65026440 MsG0180003601.01.T01:five_prime_UTR
ATTAATAATTAGTGTAGAAA+TGG 0.368572 1:-65027044 None:intergenic
TAACGTGAAGGCGAAGATTC+AGG 0.372666 1:+65033263 MsG0180003601.01.T01:CDS
TCGGAGAATAATCCTCTTAC+CGG 0.378576 1:+65029141 MsG0180003601.01.T01:CDS
GAAAGAGAGTACGCTTCATT+TGG 0.389922 1:+65033149 MsG0180003601.01.T01:CDS
AAGGGCTGTTCAATTGTTAT+CGG 0.399446 1:+65029122 MsG0180003601.01.T01:CDS
TTTGGATCTGGATTTGGTGT+TGG 0.404864 1:-65028916 None:intergenic
TCACCTTGATCTCCGGTAAG+AGG 0.408149 1:-65029153 None:intergenic
GTAAATGAGGAAAAGGAGTT+AGG 0.416537 1:-65026534 None:intergenic
ATCTTTGTAAAGACATTGAC+GGG 0.417537 1:+65033198 MsG0180003601.01.T01:CDS
CTACGCTTCATCTTGTTCTC+AGG 0.433901 1:+65033385 MsG0180003601.01.T01:CDS
TCTGCTAGAGATGTATTGCC+AGG 0.434958 1:+65027560 MsG0180003601.01.T01:CDS
AGTAGTAGTTTACCTGTAGT+TGG 0.438991 1:-65027093 None:intergenic
TCTAATTTCACCTTGATCTC+CGG 0.439413 1:-65029160 None:intergenic
TAGTTGTTGTCAATTATCAT+TGG 0.441818 1:-65028973 None:intergenic
CTCACTTGACTATGCAATCA+TGG 0.443277 1:-65027216 None:intergenic
ATTTCATTTATTTATGCATA+GGG 0.446814 1:+65027065 MsG0180003601.01.T01:intron
AAGATGAGACGCTGTTGATC+AGG 0.458297 1:-65032847 None:intergenic
AGACGGTGCACGCGTGGTAT+CGG 0.462122 1:+65027423 MsG0180003601.01.T01:five_prime_UTR
TTTAGGTAGGCTGCATGTGT+AGG 0.462348 1:-65028883 None:intergenic
TCACAAAGTAAATGAGGAAA+AGG 0.463800 1:-65026541 None:intergenic
GTTCTCAGGCTCCGTGGTGG+TGG 0.466598 1:+65033399 MsG0180003601.01.T01:CDS
AAGATCAATCGTTGCTGATC+CGG 0.468986 1:-65033075 None:intergenic
AATTTCATTTATTTATGCAT+AGG 0.470138 1:+65027064 MsG0180003601.01.T01:intron
AAGATCAATCGCTGCTGATC+CGG 0.471663 1:-65033303 None:intergenic
GTCAGAAGATTCAACTTCTA+GGG 0.481736 1:-65033004 None:intergenic
GAAGGCGAAGATTCAGGATA+AGG 0.494413 1:+65033269 MsG0180003601.01.T01:CDS
GAGATTTCTAACCCACGAAA+TGG 0.498550 1:-65027191 None:intergenic
GACGGGGAAGACGATTACTT+TGG 0.498987 1:+65033215 MsG0180003601.01.T01:CDS
ATGGAAACACAGCCATTTCG+TGG 0.499036 1:+65027179 MsG0180003601.01.T01:five_prime_UTR
AATCCTCTTACCGGAGATCA+AGG 0.499067 1:+65029150 MsG0180003601.01.T01:CDS
GCAGGGAAGCAGTTGGAAGA+TGG 0.499100 1:+65033099 MsG0180003601.01.T01:CDS
GAAGGCAAAGATTCAAGATA+AGG 0.500670 1:+65033041 MsG0180003601.01.T01:CDS
TTAGGTAGGCTGCATGTGTA+GGG 0.501659 1:-65028882 None:intergenic
GACGTTGTCGATTGTGTCAG+AGG 0.502601 1:-65032791 None:intergenic
CAATTAGGAGCACACTCGGT+TGG 0.507521 1:+65028800 MsG0180003601.01.T01:intron
GGGGAAGACGATTACTTTGG+AGG 0.509730 1:+65033218 MsG0180003601.01.T01:CDS
ATGTACCCAAATTAAAATGT+AGG 0.514711 1:-65026509 None:intergenic
GCCAAAATTCAAGACAAAGA+AGG 0.516878 1:+65032817 MsG0180003601.01.T01:CDS
GTAGGAGAAGCAATAGAAAG+AGG 0.524679 1:-65026491 None:intergenic
GTACGCTTCATTTGGTTCTG+AGG 0.533088 1:+65033157 MsG0180003601.01.T01:CDS
CATAGGGATAAGCCAACTAC+AGG 0.538078 1:+65027081 MsG0180003601.01.T01:intron
GGGAAACAGCTGAGGATGGA+AGG 0.545321 1:+65033330 MsG0180003601.01.T01:CDS
GAAGACGATTACTTTGGAGG+TGG 0.549540 1:+65033221 MsG0180003601.01.T01:CDS
TGCTGGGAAACAGCTGAGGA+TGG 0.551177 1:+65033326 MsG0180003601.01.T01:CDS
TAATGGTCACAAAGTAAATG+AGG 0.554877 1:-65026547 None:intergenic
GATCTTTGTAAAGACATTGA+CGG 0.557561 1:+65033197 MsG0180003601.01.T01:CDS
AATGAACTGTATAACAAGCA+TGG 0.560579 1:+65027160 MsG0180003601.01.T01:five_prime_UTR
GATTCAATTAGGAGCACACT+CGG 0.561889 1:+65028796 MsG0180003601.01.T01:intron
AGCAGCGATTGATCTTTGCT+GGG 0.565506 1:+65033310 MsG0180003601.01.T01:CDS
AAGCAATAGAAAGAGGAAAG+AGG 0.566003 1:-65026484 None:intergenic
ACTTCAATGAACAATTCTCA+AGG 0.567274 1:+65029103 MsG0180003601.01.T01:CDS
CAACAGCGTCTCATCTTCGC+CGG 0.570657 1:+65032853 MsG0180003601.01.T01:CDS
GGCGAAGATTCAGGATAAGG+AGG 0.572225 1:+65033272 MsG0180003601.01.T01:CDS
ATCAATCGCTGCTGATCCGG+TGG 0.573707 1:-65033300 None:intergenic
GATCTTTGCAGGGAAGCAGT+TGG 0.579236 1:+65033092 MsG0180003601.01.T01:CDS
CTCGTTCTCCGTCTCCGTGG+TGG 0.585958 1:+65032940 MsG0180003601.01.T01:CDS
TTTGCATGCCACCACGGAGA+CGG 0.585980 1:-65032948 None:intergenic
ATCAATCGTTGCTGATCCGG+TGG 0.595692 1:-65033072 None:intergenic
ATGAGACGCTGTTGATCAGG+TGG 0.595744 1:-65032844 None:intergenic
CTGCTAGAGATGTATTGCCA+GGG 0.600761 1:+65027561 MsG0180003601.01.T01:CDS
GCAAAGATTCAAGATAAGGA+AGG 0.602244 1:+65033045 MsG0180003601.01.T01:CDS
GGATAAGGAGGGAATTCCAC+CGG 0.604505 1:+65033284 MsG0180003601.01.T01:CDS
CATTTGGTTCTGAGGTTGCG+TGG 0.608016 1:+65033165 MsG0180003601.01.T01:CDS
CGAAGATTTGCATGCCACCA+CGG 0.609113 1:-65032954 None:intergenic
TCCACTGTGGGTATAGTCTG+TGG 0.614286 1:-65028847 None:intergenic
AGATAAGGAAGGAATTCCAC+CGG 0.615060 1:+65033056 MsG0180003601.01.T01:CDS
CTTCAATGAACAATTCTCAA+GGG 0.615864 1:+65029104 MsG0180003601.01.T01:CDS
CATCTTGTTCTCAGGCTCCG+TGG 0.623693 1:+65033393 MsG0180003601.01.T01:CDS
CACCACGGAGACGGAGAACG+AGG 0.628401 1:-65032939 None:intergenic
GCGAAGATTCAGGATAAGGA+GGG 0.632025 1:+65033273 MsG0180003601.01.T01:CDS
TGGAAACACAGCCATTTCGT+GGG 0.636316 1:+65027180 MsG0180003601.01.T01:five_prime_UTR
AGCAACGATTGATCTTTGCA+GGG 0.636354 1:+65033082 MsG0180003601.01.T01:CDS
AGAAGACGGTAGAACTCTTG+CGG 0.638220 1:+65032885 MsG0180003601.01.T01:CDS
ACGGAGAACGAGGTGAAGCG+TGG 0.639022 1:-65032929 None:intergenic
CAAAAGCAGTCGAATATGTG+AGG 0.639626 1:+65028935 MsG0180003601.01.T01:CDS
GTCAGCACATGACACTGTCA+AGG 0.640062 1:-65027525 None:intergenic
ATGCAGCCTACCTAAAACGT+AGG 0.642011 1:+65028890 MsG0180003601.01.T01:CDS
TGATACTATTGATAACGTGA+AGG 0.645021 1:+65033251 MsG0180003601.01.T01:CDS
CTTGTTCTCAGGCTCCGTGG+TGG 0.645532 1:+65033396 MsG0180003601.01.T01:CDS
TCTTTGCTGGGAAACAGCTG+AGG 0.647055 1:+65033322 MsG0180003601.01.T01:CDS
CACCTCGTTCTCCGTCTCCG+TGG 0.652524 1:+65032937 MsG0180003601.01.T01:CDS
TCTAACGTTGGATCCACTGT+GGG 0.662624 1:-65028859 None:intergenic
ACATAAGGGTCTTCTAACTG+TGG 0.663385 1:+65029014 MsG0180003601.01.T01:CDS
GTCTAACGTTGGATCCACTG+TGG 0.672814 1:-65028860 None:intergenic
GCATGTGTAGGGTCTAACGT+TGG 0.674020 1:-65028871 None:intergenic
GCCGGAAAACAACTAGAAGA+CGG 0.674424 1:+65032871 MsG0180003601.01.T01:CDS
TTGGTTCTGAGGTTGCGTGG+TGG 0.679675 1:+65033168 MsG0180003601.01.T01:CDS
TGACACAATCGATAACGTGA+AGG 0.684659 1:+65033023 MsG0180003601.01.T01:CDS
TCTTCGTCAAAACCTTAACA+GGG 0.688625 1:+65032971 MsG0180003601.01.T01:CDS
TCTAAACATCGCCACCACCA+CGG 0.690969 1:-65033410 None:intergenic
TCCACAGACTATACCCACAG+TGG 0.743617 1:+65028846 MsG0180003601.01.T01:CDS
TCTTTGTAAAGACATTGACG+GGG 0.758472 1:+65033199 MsG0180003601.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAATTAAAGATCTATT+AGG - Chr1:65027658-65027677 None:intergenic 10.0%
!! AAATAATAATGATTTATATG+TGG + Chr1:65027357-65027376 MsG0180003601.01.T01:intron 10.0%
!! AATAATAATGATTTATATGT+GGG + Chr1:65027358-65027377 MsG0180003601.01.T01:intron 10.0%
!! GAAAAAAGTTAAAATATAAA+GGG + Chr1:65028068-65028087 MsG0180003601.01.T01:intron 10.0%
!! TATTGTTAAAACTTAAAATA+AGG + Chr1:65031673-65031692 MsG0180003601.01.T01:intron 10.0%
!!! AAAAAGTTTTCTAAATATAT+TGG - Chr1:65030555-65030574 None:intergenic 10.0%
!!! ATTTTATTTAAACAAAAGAT+AGG + Chr1:65032377-65032396 MsG0180003601.01.T01:intron 10.0%
!!! CTTTTGTTTAAATAAAATTT+TGG - Chr1:65032375-65032394 None:intergenic 10.0%
!!! GGAAATTTATTTTATTTTAA+AGG + Chr1:65032244-65032263 MsG0180003601.01.T01:intron 10.0%
!!! TTATGAAATTTTATATGAAA+AGG - Chr1:65031374-65031393 None:intergenic 10.0%
!!! TTTATAATTCAACATTTTAT+TGG + Chr1:65028766-65028785 MsG0180003601.01.T01:intron 10.0%
!!! TTTTTTTAATATCTACTTAA+CGG + Chr1:65031191-65031210 MsG0180003601.01.T01:intron 10.0%
!! AAAAGAAAAATTAATTCCAT+GGG + Chr1:65029253-65029272 MsG0180003601.01.T01:intron 15.0%
!! AATACTAGACTATTTATATT+TGG + Chr1:65028121-65028140 MsG0180003601.01.T01:intron 15.0%
!! AATATTAAGTGTTAATGTAA+CGG - Chr1:65028417-65028436 None:intergenic 15.0%
!! AATTTCATTTATTTATGCAT+AGG + Chr1:65027064-65027083 MsG0180003601.01.T01:intron 15.0%
!! ACACATAACAAAAATAATAA+AGG + Chr1:65030824-65030843 MsG0180003601.01.T01:intron 15.0%
!! AGAATTAAAAAGGAAATAAA+AGG + Chr1:65030848-65030867 MsG0180003601.01.T01:intron 15.0%
!! ATTAATAATTAGTGTAGAAA+TGG - Chr1:65027047-65027066 None:intergenic 15.0%
!! ATTTCATTTATTTATGCATA+GGG + Chr1:65027065-65027084 MsG0180003601.01.T01:intron 15.0%
!! CTATTAATATAATTGCTAAT+TGG + Chr1:65028358-65028377 MsG0180003601.01.T01:intron 15.0%
!! GGAAAAAAGTTAAAATATAA+AGG + Chr1:65028067-65028086 MsG0180003601.01.T01:intron 15.0%
!! TAATAAAGGTAGAATTAAAA+AGG + Chr1:65030838-65030857 MsG0180003601.01.T01:intron 15.0%
!! TATCAACATATAACTTTAAA+CGG - Chr1:65029450-65029469 None:intergenic 15.0%
!!! AAAATGTTATAGCTTTTTTT+AGG + Chr1:65030924-65030943 MsG0180003601.01.T01:intron 15.0%
!!! ACTTCAATTTTAAGTAAATT+TGG - Chr1:65031336-65031355 None:intergenic 15.0%
!!! ATCTTATATTTTTTAATGGA+AGG + Chr1:65026671-65026690 MsG0180003601.01.T01:intron 15.0%
!!! ATTTTTTCATTAAAATGCAA+GGG + Chr1:65026804-65026823 MsG0180003601.01.T01:intron 15.0%
!!! CACTATCTTATATTTTTTAA+TGG + Chr1:65026667-65026686 MsG0180003601.01.T01:intron 15.0%
!!! CTTCAATTTTAAGTAAATTT+GGG - Chr1:65031335-65031354 None:intergenic 15.0%
!!! TATTTTTTCATTAAAATGCA+AGG + Chr1:65026803-65026822 MsG0180003601.01.T01:intron 15.0%
!!! TTTTTTAATATCTACTTAAC+GGG + Chr1:65031192-65031211 MsG0180003601.01.T01:intron 15.0%
!! AAAAAAATAGGTATTTCACA+GGG - Chr1:65030118-65030137 None:intergenic 20.0%
!! AAAAATATCCCTAAATTTAG+AGG - Chr1:65027695-65027714 None:intergenic 20.0%
!! AAAATATCCCTAAATTTAGA+GGG - Chr1:65027694-65027713 None:intergenic 20.0%
!! AAAGAAAAATTAATTCCATG+GGG + Chr1:65029254-65029273 MsG0180003601.01.T01:intron 20.0%
!! AAATTTAAATTACGTTTACC+TGG - Chr1:65031650-65031669 None:intergenic 20.0%
!! AAGCAATTTGAATTTAAGAA+TGG + Chr1:65031834-65031853 MsG0180003601.01.T01:intron 20.0%
!! AATTTAAATTACGTTTACCT+GGG - Chr1:65031649-65031668 None:intergenic 20.0%
!! AATTTCGTTAATGTAATGAA+AGG - Chr1:65028482-65028501 None:intergenic 20.0%
!! ATATTGAGGATTAAAGATTA+TGG - Chr1:65030610-65030629 None:intergenic 20.0%
!! ATCACCTTATGTAAAAAAAA+TGG + Chr1:65029065-65029084 MsG0180003601.01.T01:CDS 20.0%
!! CAAAAGAAAAATTAATTCCA+TGG + Chr1:65029252-65029271 MsG0180003601.01.T01:intron 20.0%
!! CAAAAGATAGGAAATTAATT+TGG + Chr1:65032389-65032408 MsG0180003601.01.T01:intron 20.0%
!! CATAAAATCTTAATCTGTTA+CGG + Chr1:65026978-65026997 MsG0180003601.01.T01:intron 20.0%
!! GTCAATAAAAATCGAATAAT+CGG + Chr1:65029512-65029531 MsG0180003601.01.T01:intron 20.0%
!! TAACTTAAAATTTCCAAATG+AGG - Chr1:65030800-65030819 None:intergenic 20.0%
!! TATTAGGTGAAATAATATTG+AGG - Chr1:65027642-65027661 None:intergenic 20.0%
!! TATTGAGGATTAAAGATTAT+GGG - Chr1:65030609-65030628 None:intergenic 20.0%
!! TTAATTAATCACCAAAAGAA+AGG + Chr1:65028046-65028065 MsG0180003601.01.T01:intron 20.0%
!! TTTGAAGGTTATCTTTAAAT+TGG + Chr1:65032057-65032076 MsG0180003601.01.T01:intron 20.0%
!!! AAAAACATTTTGCAACATAA+GGG + Chr1:65029000-65029019 MsG0180003601.01.T01:CDS 20.0%
!!! AATAGTCTAGTATTTCTAAA+AGG - Chr1:65028115-65028134 None:intergenic 20.0%
!!! AATGTATTTTTTGTAAGTGT+GGG + Chr1:65028725-65028744 MsG0180003601.01.T01:intron 20.0%
!!! ACTTTTTTTAAACTGATATG+TGG + Chr1:65029675-65029694 MsG0180003601.01.T01:intron 20.0%
!!! AGTCATTTTAAGTCATTTTA+GGG + Chr1:65032273-65032292 MsG0180003601.01.T01:intron 20.0%
!!! ATCATATATACATGTTGATT+AGG + Chr1:65027598-65027617 MsG0180003601.01.T01:intron 20.0%
!!! CATTTGGAAATTTTAAGTTA+AGG + Chr1:65030800-65030819 MsG0180003601.01.T01:intron 20.0%
!!! GGAATTAATTTTTCTTTTGA+AGG - Chr1:65029251-65029270 None:intergenic 20.0%
!!! GTATGTTTTGTATATTTAGT+TGG + Chr1:65028164-65028183 MsG0180003601.01.T01:intron 20.0%
!!! TAGTCATTTTAAGTCATTTT+AGG + Chr1:65032272-65032291 MsG0180003601.01.T01:intron 20.0%
!!! TATTCTTAAAGTCCTTTTTT+AGG - Chr1:65031234-65031253 None:intergenic 20.0%
!!! TTAACTTTTTTCCTTTCTTT+TGG - Chr1:65028060-65028079 None:intergenic 20.0%
!!! TTATATGAAAAGGATAGTTT+TGG - Chr1:65031364-65031383 None:intergenic 20.0%
! AAAAAAATGGCAGATGATAA+TGG + Chr1:65029078-65029097 MsG0180003601.01.T01:CDS 25.0%
! AAAACCTTCAAAAGATTTGT+GGG + Chr1:65029330-65029349 MsG0180003601.01.T01:intron 25.0%
! AAACTCTATCAAATTTGCAA+GGG - Chr1:65029979-65029998 None:intergenic 25.0%
! AACAAAGAACAAAGATAAGA+GGG + Chr1:65030268-65030287 MsG0180003601.01.T01:intron 25.0%
! AATAATTCAGGAATAATACG+TGG + Chr1:65028565-65028584 MsG0180003601.01.T01:intron 25.0%
! AATTATTATTCGATCATGTG+GGG + Chr1:65032425-65032444 MsG0180003601.01.T01:intron 25.0%
! ACTTTGTGACGAAATATATT+TGG - Chr1:65027771-65027790 None:intergenic 25.0%
! AGAAAATGTGATTGTATTCT+AGG + Chr1:65032162-65032181 MsG0180003601.01.T01:intron 25.0%
! ATAGTGAAGAATAATAACGT+GGG - Chr1:65026653-65026672 None:intergenic 25.0%
! ATGTACCCAAATTAAAATGT+AGG - Chr1:65026512-65026531 None:intergenic 25.0%
! CTGATTATATGCTATCTAAT+TGG - Chr1:65029206-65029225 None:intergenic 25.0%
! CTTAATCATGTTTGAAAATG+TGG + Chr1:65028621-65028640 MsG0180003601.01.T01:intron 25.0%
! GAAAAAAATAGGTATTTCAC+AGG - Chr1:65030119-65030138 None:intergenic 25.0%
! GAATTATTATTCGATCATGT+GGG + Chr1:65032424-65032443 MsG0180003601.01.T01:intron 25.0%
! GATTGATAGACTTGAAAAAA+CGG - Chr1:65030465-65030484 None:intergenic 25.0%
! GGTTAATGCAAATTAAGTTT+AGG + Chr1:65031694-65031713 MsG0180003601.01.T01:intron 25.0%
! GTACACTTAAAACTTAGTTT+AGG + Chr1:65031788-65031807 MsG0180003601.01.T01:intron 25.0%
! TAAACTCTATCAAATTTGCA+AGG - Chr1:65029980-65029999 None:intergenic 25.0%
! TAGTTGTTGTCAATTATCAT+TGG - Chr1:65028976-65028995 None:intergenic 25.0%
! TATGTTGCTATATTTGTTCT+AGG - Chr1:65030216-65030235 None:intergenic 25.0%
! TCGCAAAATTAAGTTTCATA+TGG + Chr1:65030061-65030080 MsG0180003601.01.T01:intron 25.0%
! TCTTATGAAATCTGTTTGTA+AGG + Chr1:65026702-65026721 MsG0180003601.01.T01:intron 25.0%
! TCTTTAATCTTTCATTGAGA+TGG - Chr1:65031464-65031483 None:intergenic 25.0%
! TGAATTATTATTCGATCATG+TGG + Chr1:65032423-65032442 MsG0180003601.01.T01:intron 25.0%
! TGACATAAGTGTATAAATAG+TGG - Chr1:65028595-65028614 None:intergenic 25.0%
! TGATCGAATAATAATTCACT+AGG - Chr1:65032421-65032440 None:intergenic 25.0%
! TGGGTGTAAACAAAATATAT+GGG - Chr1:65031316-65031335 None:intergenic 25.0%
! TTAAGAACACTTCCTAAAAA+AGG + Chr1:65031219-65031238 MsG0180003601.01.T01:intron 25.0%
! TTGAAAAAACGGTAGAAATT+CGG - Chr1:65030454-65030473 None:intergenic 25.0%
! TTGGGTGTAAACAAAATATA+TGG - Chr1:65031317-65031336 None:intergenic 25.0%
! TTGTAAAGACTTATTCATAC+TGG - Chr1:65030378-65030397 None:intergenic 25.0%
! TTGTAATATACTACTATTCG+AGG + Chr1:65029478-65029497 MsG0180003601.01.T01:intron 25.0%
!! AAGATAGGAAATTAATTTGG+TGG + Chr1:65032392-65032411 MsG0180003601.01.T01:intron 25.0%
!! ATATGAAACTTAATTTTGCG+AGG - Chr1:65030062-65030081 None:intergenic 25.0%
!! ATGTATTTTGCATTCATAGT+TGG - Chr1:65032026-65032045 None:intergenic 25.0%
!! CAAAAACATTTTGCAACATA+AGG + Chr1:65028999-65029018 MsG0180003601.01.T01:CDS 25.0%
!! TATATGCAGAAGAGTATAAA+TGG - Chr1:65031504-65031523 None:intergenic 25.0%
!! TATGAAACTTAATTTTGCGA+GGG - Chr1:65030061-65030080 None:intergenic 25.0%
!! TCACTTATGGAAGTATAATT+AGG + Chr1:65028507-65028526 MsG0180003601.01.T01:intron 25.0%
!! TCCATGTCTTTTGTATTTTA+TGG + Chr1:65031575-65031594 MsG0180003601.01.T01:intron 25.0%
!! TCTTTTATAGTCTATTTGAG+AGG - Chr1:65030634-65030653 None:intergenic 25.0%
!! TGTTTTGTATATTTAGTTGG+AGG + Chr1:65028167-65028186 MsG0180003601.01.T01:intron 25.0%
!! TTGTCACATGCTTTAAATAA+TGG - Chr1:65026567-65026586 None:intergenic 25.0%
!!! AGATTATCATTGTTTTGCAA+TGG - Chr1:65029852-65029871 None:intergenic 25.0%
!!! AGATTTTAGAAGAGATGAAA+GGG + Chr1:65032209-65032228 MsG0180003601.01.T01:intron 25.0%
!!! CAATGTATTTTTTGTAAGTG+TGG + Chr1:65028724-65028743 MsG0180003601.01.T01:intron 25.0%
!!! CTTCTAAAATCTAATATGTG+TGG - Chr1:65032201-65032220 None:intergenic 25.0%
!!! CTTCTAGTTTCAATGATTTT+GGG + Chr1:65031537-65031556 MsG0180003601.01.T01:intron 25.0%
!!! CTTCTCCTACATTTTAATTT+GGG + Chr1:65026504-65026523 MsG0180003601.01.T01:five_prime_UTR 25.0%
!!! CTTGATCATGCATTTTAATT+GGG - Chr1:65029607-65029626 None:intergenic 25.0%
!!! GATTATCATTGTTTTGCAAT+GGG - Chr1:65029851-65029870 None:intergenic 25.0%
!!! GTATAGAATTTTCTAAGAGT+GGG - Chr1:65026852-65026871 None:intergenic 25.0%
!!! TAGATTTTAGAAGAGATGAA+AGG + Chr1:65032208-65032227 MsG0180003601.01.T01:intron 25.0%
!!! TCTGCCATTTTTTTTACATA+AGG - Chr1:65029072-65029091 None:intergenic 25.0%
!!! TCTTCTAGTTTCAATGATTT+TGG + Chr1:65031536-65031555 MsG0180003601.01.T01:intron 25.0%
!!! TCTTGATCATGCATTTTAAT+TGG - Chr1:65029608-65029627 None:intergenic 25.0%
!!! TTAAGCAAGGAATTTGTTTT+CGG - Chr1:65032550-65032569 None:intergenic 25.0%
AACAAAGCACATGCAAATTA+GGG + Chr1:65031996-65032015 MsG0180003601.01.T01:intron 30.0%
AACTCTATCAAATTTGCAAG+GGG - Chr1:65029978-65029997 None:intergenic 30.0%
AAGACTTATTCATACTGGAT+TGG - Chr1:65030373-65030392 None:intergenic 30.0%
AATCCAAGACAATAAAGAAG+TGG + Chr1:65028533-65028552 MsG0180003601.01.T01:intron 30.0%
AATGAACTGTATAACAAGCA+TGG + Chr1:65027160-65027179 MsG0180003601.01.T01:five_prime_UTR 30.0%
AATGTGATTGTATTCTAGGT+TGG + Chr1:65032166-65032185 MsG0180003601.01.T01:intron 30.0%
AATTTCCAAATGAGGATTGT+AGG - Chr1:65030792-65030811 None:intergenic 30.0%
ACATCAAGAATCGAATTTGA+AGG + Chr1:65032042-65032061 MsG0180003601.01.T01:intron 30.0%
ACGAAATTATCACTCACTTA+TGG + Chr1:65028494-65028513 MsG0180003601.01.T01:intron 30.0%
ACTTCAATGAACAATTCTCA+AGG + Chr1:65029103-65029122 MsG0180003601.01.T01:CDS 30.0%
AGATCAAGGTGAAATTAGAA+AGG + Chr1:65029164-65029183 MsG0180003601.01.T01:intron 30.0%
ATCTTTGTAAAGACATTGAC+GGG + Chr1:65033198-65033217 MsG0180003601.01.T01:CDS 30.0%
ATGCAGTTCTTAAGAAATCT+TGG + Chr1:65027803-65027822 MsG0180003601.01.T01:intron 30.0%
ATGTGATTGTATTCTAGGTT+GGG + Chr1:65032167-65032186 MsG0180003601.01.T01:intron 30.0%
CAAAACCTTCAAAAGATTTG+TGG + Chr1:65029329-65029348 MsG0180003601.01.T01:intron 30.0%
CACACTCAATTATTTGGATT+AGG + Chr1:65029550-65029569 MsG0180003601.01.T01:intron 30.0%
CTAATCCAAATAATTGAGTG+TGG - Chr1:65029552-65029571 None:intergenic 30.0%
CTGATCTATTCAGCTAATAT+TGG + Chr1:65026894-65026913 MsG0180003601.01.T01:intron 30.0%
CTTCAATGAACAATTCTCAA+GGG + Chr1:65029104-65029123 MsG0180003601.01.T01:CDS 30.0%
GAACAAAGAACAAAGATAAG+AGG + Chr1:65030267-65030286 MsG0180003601.01.T01:intron 30.0%
GATAGTGAAGAATAATAACG+TGG - Chr1:65026654-65026673 None:intergenic 30.0%
GATATTGAGTCATTATGGTT+TGG - Chr1:65028265-65028284 None:intergenic 30.0%
GATCTTTGTAAAGACATTGA+CGG + Chr1:65033197-65033216 MsG0180003601.01.T01:CDS 30.0%
GATGTTCAGTTTGAGTAAAA+AGG - Chr1:65031967-65031986 None:intergenic 30.0%
GCACATCTATGATTGTTTAT+GGG - Chr1:65031438-65031457 None:intergenic 30.0%
GCCATAAAATACAAAAGACA+TGG - Chr1:65031579-65031598 None:intergenic 30.0%
GGATAGTTAGATCTCATTAA+AGG - Chr1:65030534-65030553 None:intergenic 30.0%
GGCACGTACATAAAAATAAA+TGG - Chr1:65031946-65031965 None:intergenic 30.0%
GTATACCACACTCAATTATT+TGG + Chr1:65029544-65029563 MsG0180003601.01.T01:intron 30.0%
GTGACGAAATATATTTGGTA+TGG - Chr1:65027766-65027785 None:intergenic 30.0%
TAAAGACTTATCCAAAACGT+AGG - Chr1:65030343-65030362 None:intergenic 30.0%
TAACTCTCCCTCTAAATTTA+GGG + Chr1:65027684-65027703 MsG0180003601.01.T01:intron 30.0%
TAATGGTCACAAAGTAAATG+AGG - Chr1:65026550-65026569 None:intergenic 30.0%
TACACCATGCGATTATATTT+AGG - Chr1:65031271-65031290 None:intergenic 30.0%
TAGCAAACTACATGTAAACT+CGG + Chr1:65031867-65031886 MsG0180003601.01.T01:intron 30.0%
TCACAAAGTAAATGAGGAAA+AGG - Chr1:65026544-65026563 None:intergenic 30.0%
TCTAATTGTCCATTAGTGAA+AGG + Chr1:65029723-65029742 MsG0180003601.01.T01:intron 30.0%
TCTATTTGAGAGGAATATTG+AGG - Chr1:65030624-65030643 None:intergenic 30.0%
TGAAAAAACGGTAGAAATTC+GGG - Chr1:65030453-65030472 None:intergenic 30.0%
TGACTAGAATCCTTATCAAA+CGG - Chr1:65029408-65029427 None:intergenic 30.0%
TGCACATCTATGATTGTTTA+TGG - Chr1:65031439-65031458 None:intergenic 30.0%
TGGCACTACAAGAAAAAAAT+AGG - Chr1:65030130-65030149 None:intergenic 30.0%
TTAACTCTCCCTCTAAATTT+AGG + Chr1:65027683-65027702 MsG0180003601.01.T01:intron 30.0%
TTCTCCTAAATATAATCGCA+TGG + Chr1:65031264-65031283 MsG0180003601.01.T01:intron 30.0%
TTTACATAAGGTGATGTTCT+TGG - Chr1:65029060-65029079 None:intergenic 30.0%
! AAGAGTACATTGCATGAATT+TGG + Chr1:65028823-65028842 MsG0180003601.01.T01:CDS 30.0%
! AGATTTTGTGAAAACTTGAC+CGG + Chr1:65032743-65032762 MsG0180003601.01.T01:intron 30.0%
! ATGAAACTTAATTTTGCGAG+GGG - Chr1:65030060-65030079 None:intergenic 30.0%
! CCACTTTCATTTCAAAGTTT+TGG - Chr1:65028194-65028213 None:intergenic 30.0%
! CTAGGTTGAATATTGTTTCT+TGG - Chr1:65030198-65030217 None:intergenic 30.0%
! CTCAATTATTTGGATTAGGT+AGG + Chr1:65029554-65029573 MsG0180003601.01.T01:intron 30.0%
! GAGAAACATGTTTTCGTTTT+TGG + Chr1:65030946-65030965 MsG0180003601.01.T01:intron 30.0%
! TCCTTCTTTGTCTTGAATTT+TGG - Chr1:65032821-65032840 None:intergenic 30.0%
! TGGGGTGTAACTAAATTTTA+GGG + Chr1:65032335-65032354 MsG0180003601.01.T01:intron 30.0%
! TGGTCTGAGATTAATAATTC+AGG + Chr1:65028553-65028572 MsG0180003601.01.T01:intron 30.0%
! TTGGGGTGTAACTAAATTTT+AGG + Chr1:65032334-65032353 MsG0180003601.01.T01:intron 30.0%
! TTGGTCACTTTGATTCAATT+AGG + Chr1:65028785-65028804 MsG0180003601.01.T01:intron 30.0%
! TTTGAAATGAAAGTGGACAA+AGG + Chr1:65028198-65028217 MsG0180003601.01.T01:intron 30.0%
! TTTTTCACGCACATATACTT+TGG + Chr1:65027711-65027730 MsG0180003601.01.T01:intron 30.0%
!! ACATTTCAACTTGCTAGATA+TGG + Chr1:65026440-65026459 MsG0180003601.01.T01:five_prime_UTR 30.0%
!! AGATTGATGATGAATGAGAT+AGG - Chr1:65032631-65032650 None:intergenic 30.0%
!! ATGAAAGGGTTTTAGTATGA+TGG + Chr1:65032223-65032242 MsG0180003601.01.T01:intron 30.0%
!! CATTTTAAGTCATTTTAGGG+TGG + Chr1:65032276-65032295 MsG0180003601.01.T01:intron 30.0%
!! CCAAAACTTTGAAATGAAAG+TGG + Chr1:65028191-65028210 MsG0180003601.01.T01:intron 30.0%
!! CGTATAGAATTTTCTAAGAG+TGG - Chr1:65026853-65026872 None:intergenic 30.0%
!! TAAGCAAGGAATTTGTTTTC+GGG - Chr1:65032549-65032568 None:intergenic 30.0%
!! TGATACTATTGATAACGTGA+AGG + Chr1:65033251-65033270 MsG0180003601.01.T01:CDS 30.0%
!!! GCTTCTCCTACATTTTAATT+TGG + Chr1:65026503-65026522 MsG0180003601.01.T01:five_prime_UTR 30.0%
AAAAGCTGATCCGTTTGATA+AGG + Chr1:65029395-65029414 MsG0180003601.01.T01:intron 35.0%
AAACTCAATTTACGTTAGCC+AGG - Chr1:65031762-65031781 None:intergenic 35.0%
AACTCAATTTACGTTAGCCA+GGG - Chr1:65031761-65031780 None:intergenic 35.0%
AACTTCCAAGTTTAGGAAAG+AGG - Chr1:65032452-65032471 None:intergenic 35.0%
AAGCAATAGAAAGAGGAAAG+AGG - Chr1:65026487-65026506 None:intergenic 35.0%
AAGGGCTGTTCAATTGTTAT+CGG + Chr1:65029122-65029141 MsG0180003601.01.T01:CDS 35.0%
AATTCGATATGGCCTTTGAT+AGG + Chr1:65029921-65029940 MsG0180003601.01.T01:intron 35.0%
ACAAAGCACATGCAAATTAG+GGG + Chr1:65031997-65032016 MsG0180003601.01.T01:intron 35.0%
ACATCAGAAATCAAAGTCTC+AGG - Chr1:65029808-65029827 None:intergenic 35.0%
ACTTTGTCACCTTTCACTAA+TGG - Chr1:65029735-65029754 None:intergenic 35.0%
AGACCACTTCTTTATTGTCT+TGG - Chr1:65028539-65028558 None:intergenic 35.0%
AGATTCCTACAATCCTCATT+TGG + Chr1:65030784-65030803 MsG0180003601.01.T01:intron 35.0%
AGGTATGAGATGTTAACTGA+AGG + Chr1:65031808-65031827 MsG0180003601.01.T01:intron 35.0%
AGGTCAAATTGAGTCAAAGT+TGG - Chr1:65030323-65030342 None:intergenic 35.0%
AGTAGTAGTTTACCTGTAGT+TGG - Chr1:65027096-65027115 None:intergenic 35.0%
ATCTTCGTCAAAACCTTAAC+AGG + Chr1:65032970-65032989 MsG0180003601.01.T01:CDS 35.0%
ATGATTGTTTATGGGTGAGA+GGG - Chr1:65031430-65031449 None:intergenic 35.0%
CAACAAAGCACATGCAAATT+AGG + Chr1:65031995-65032014 MsG0180003601.01.T01:intron 35.0%
CAGTTCTTAAGAAATCTTGG+AGG + Chr1:65027806-65027825 MsG0180003601.01.T01:intron 35.0%
CCACATAATTTAGTGTCAAG+GGG + Chr1:65029775-65029794 MsG0180003601.01.T01:intron 35.0%
CCCACATAATTTAGTGTCAA+GGG + Chr1:65029774-65029793 MsG0180003601.01.T01:intron 35.0%
CCCTTGACACTAAATTATGT+GGG - Chr1:65029777-65029796 None:intergenic 35.0%
CTGAGGATATTGAGTCATTA+TGG - Chr1:65028270-65028289 None:intergenic 35.0%
GAAGGCAAAGATTCAAGATA+AGG + Chr1:65033041-65033060 MsG0180003601.01.T01:CDS 35.0%
GCAAAGATTCAAGATAAGGA+AGG + Chr1:65033045-65033064 MsG0180003601.01.T01:CDS 35.0%
GCCAAAATTCAAGACAAAGA+AGG + Chr1:65032817-65032836 MsG0180003601.01.T01:CDS 35.0%
GGATGTTGATGTTGAATTGT+TGG + Chr1:65028142-65028161 MsG0180003601.01.T01:intron 35.0%
GTAAATGAGGAAAAGGAGTT+AGG - Chr1:65026537-65026556 None:intergenic 35.0%
GTCAGAAGATTCAACTTCTA+GGG - Chr1:65033007-65033026 None:intergenic 35.0%
TATCAAAGGCCATATCGAAT+TGG - Chr1:65029922-65029941 None:intergenic 35.0%
TATGATTGTTTATGGGTGAG+AGG - Chr1:65031431-65031450 None:intergenic 35.0%
TATTCACAAATCCTTTGCGA+GGG - Chr1:65030005-65030024 None:intergenic 35.0%
TCAACTGAACCAATTCGATA+TGG + Chr1:65029910-65029929 MsG0180003601.01.T01:intron 35.0%
TCTAATTTCACCTTGATCTC+CGG - Chr1:65029163-65029182 None:intergenic 35.0%
TCTTCGTCAAAACCTTAACA+GGG + Chr1:65032971-65032990 MsG0180003601.01.T01:CDS 35.0%
TCTTTGTAAAGACATTGACG+GGG + Chr1:65033199-65033218 MsG0180003601.01.T01:CDS 35.0%
TGCCAAGAAAAACAAAGATG+TGG + Chr1:65030145-65030164 MsG0180003601.01.T01:intron 35.0%
TGTCAGAAGATTCAACTTCT+AGG - Chr1:65033008-65033027 None:intergenic 35.0%
TTAAACTGATATGTGGTCGA+AGG + Chr1:65029682-65029701 MsG0180003601.01.T01:intron 35.0%
TTGTTCTTTGCTCATGATTG+TGG - Chr1:65030253-65030272 None:intergenic 35.0%
TTTGGAAGATGAAGAAGAGT+GGG + Chr1:65032123-65032142 MsG0180003601.01.T01:intron 35.0%
! ACTCAATTTGACCTACGTTT+TGG + Chr1:65030329-65030348 MsG0180003601.01.T01:intron 35.0%
! ATGGCGAAGTAGTTTTTCTA+TGG + Chr1:65031594-65031613 MsG0180003601.01.T01:intron 35.0%
! GAAGTTGTACGATTGAGTTT+TGG + Chr1:65032105-65032124 MsG0180003601.01.T01:intron 35.0%
! GTTAATGTAACGGTTTTCAG+TGG - Chr1:65028407-65028426 None:intergenic 35.0%
! TTAGCTTGAGTATTAATCCC+AGG + Chr1:65031629-65031648 MsG0180003601.01.T01:intron 35.0%
!! AAGGAATTTGTTTTCGGGAA+TGG - Chr1:65032544-65032563 None:intergenic 35.0%
!! AGATTCAACTTCTAGGGTTA+TGG - Chr1:65033001-65033020 None:intergenic 35.0%
!! CATGTTTTCGTTTTTGGAAG+AGG + Chr1:65030952-65030971 MsG0180003601.01.T01:intron 35.0%
!! GGTGTAACTAAATTTTAGGG+TGG + Chr1:65032338-65032357 MsG0180003601.01.T01:intron 35.0%
!! TAGAAATTCGGGTTTTCTCT+TGG - Chr1:65030442-65030461 None:intergenic 35.0%
!! TGATGATCTCTTCTGCTTTT+GGG - Chr1:65027129-65027148 None:intergenic 35.0%
!! TTGAAAACTAGAAAGCACTG+AGG - Chr1:65028287-65028306 None:intergenic 35.0%
!! TTGATGATCTCTTCTGCTTT+TGG - Chr1:65027130-65027149 None:intergenic 35.0%
!! TTTTCTAAGAGTGGGAAACA+AGG - Chr1:65026844-65026863 None:intergenic 35.0%
!! TTTTGGAAGATGAAGAAGAG+TGG + Chr1:65032122-65032141 MsG0180003601.01.T01:intron 35.0%
!!! ATGGTTTTGTTGCATTTCTC+AGG + Chr1:65030080-65030099 MsG0180003601.01.T01:intron 35.0%
!!! CTCCACATCTTTGTTTTTCT+TGG - Chr1:65030150-65030169 None:intergenic 35.0%
!!! TGGTTTTGTTGCATTTCTCA+GGG + Chr1:65030081-65030100 MsG0180003601.01.T01:intron 35.0%
AAGATCAATCGTTGCTGATC+CGG - Chr1:65033078-65033097 None:intergenic 40.0%
AATGAAGCGTACTCTCTTTC+TGG - Chr1:65033149-65033168 None:intergenic 40.0%
ACATAAGGGTCTTCTAACTG+TGG + Chr1:65029014-65029033 MsG0180003601.01.T01:CDS 40.0%
ACTAGCAAATTTAAGCCCCA+TGG - Chr1:65029272-65029291 None:intergenic 40.0%
AGATAAGGAAGGAATTCCAC+CGG + Chr1:65033056-65033075 MsG0180003601.01.T01:CDS 40.0%
AGATTGAAACAACCCAAACC+TGG + Chr1:65030758-65030777 MsG0180003601.01.T01:intron 40.0%
AGCAACGATTGATCTTTGCA+GGG + Chr1:65033082-65033101 MsG0180003601.01.T01:CDS 40.0%
ATTCACAAATCCTTTGCGAG+GGG - Chr1:65030004-65030023 None:intergenic 40.0%
CAAAAGCAGTCGAATATGTG+AGG + Chr1:65028935-65028954 MsG0180003601.01.T01:CDS 40.0%
CATGTACAAACTGTTAACCC+TGG + Chr1:65031741-65031760 MsG0180003601.01.T01:intron 40.0%
CCCCTTGACACTAAATTATG+TGG - Chr1:65029778-65029797 None:intergenic 40.0%
CTCACTTGACTATGCAATCA+TGG - Chr1:65027219-65027238 None:intergenic 40.0%
GAATATTCCAACACTTGACG+TGG - Chr1:65032517-65032536 None:intergenic 40.0%
GAGATTTCTAACCCACGAAA+TGG - Chr1:65027194-65027213 None:intergenic 40.0%
GATGATGAATGAGATAGGAG+AGG - Chr1:65032626-65032645 None:intergenic 40.0%
GCCCACATAATTTAGTGTCA+AGG + Chr1:65029773-65029792 MsG0180003601.01.T01:intron 40.0%
GTAGGAGAAGCAATAGAAAG+AGG - Chr1:65026494-65026513 None:intergenic 40.0%
GTATTCACAAATCCTTTGCG+AGG - Chr1:65030006-65030025 None:intergenic 40.0%
TAGGAATCTCAACCAGGTTT+GGG - Chr1:65030773-65030792 None:intergenic 40.0%
TCGGAGAATAATCCTCTTAC+CGG + Chr1:65029141-65029160 MsG0180003601.01.T01:CDS 40.0%
TGACACAATCGATAACGTGA+AGG + Chr1:65033023-65033042 MsG0180003601.01.T01:CDS 40.0%
TGATTGTTTATGGGTGAGAG+GGG - Chr1:65031429-65031448 None:intergenic 40.0%
TGCACGAAACTTCCAAGTTT+AGG - Chr1:65032459-65032478 None:intergenic 40.0%
! AGACAGCAGAGAGAAGTTTT+GGG + Chr1:65027449-65027468 MsG0180003601.01.T01:five_prime_UTR 40.0%
! AGATGAAGAAGAGTGGGTTT+CGG + Chr1:65032129-65032148 MsG0180003601.01.T01:intron 40.0%
! CCTCTAGGTTTATGTTTTGC+CGG - Chr1:65032765-65032784 None:intergenic 40.0%
! CTCACATATTCGACTGCTTT+TGG - Chr1:65028937-65028956 None:intergenic 40.0%
! GAAAGAGAGTACGCTTCATT+TGG + Chr1:65033149-65033168 MsG0180003601.01.T01:CDS 40.0%
! GACACCCACAAATCTTTTGA+AGG - Chr1:65029337-65029356 None:intergenic 40.0%
! GATTCAATTAGGAGCACACT+CGG + Chr1:65028796-65028815 MsG0180003601.01.T01:intron 40.0%
! GGAGCTAGGTTAGTCATTTA+GGG + Chr1:65032297-65032316 MsG0180003601.01.T01:intron 40.0%
! GGTTATGGTTTTCCCTGTTA+AGG - Chr1:65032986-65033005 None:intergenic 40.0%
! TGGAGCTAGGTTAGTCATTT+AGG + Chr1:65032296-65032315 MsG0180003601.01.T01:intron 40.0%
! TGTATTCTAGGTTGGGAAGA+AGG + Chr1:65032174-65032193 MsG0180003601.01.T01:intron 40.0%
! TTTCTCAAGAGCAGCTTTGA+TGG - Chr1:65027499-65027518 None:intergenic 40.0%
! TTTTGTAAGTGTGGGAGTCA+TGG + Chr1:65028733-65028752 MsG0180003601.01.T01:intron 40.0%
!! AAATGCAAGGGTGTCATAGA+AGG + Chr1:65026816-65026835 MsG0180003601.01.T01:intron 40.0%
!! ACCGTCTTCTAGTTGTTTTC+CGG - Chr1:65032875-65032894 None:intergenic 40.0%
!! ACTGCTTTTGGATCTGGATT+TGG - Chr1:65028925-65028944 None:intergenic 40.0%
!! AGGTTTGGGTTGTTTCAATC+TGG - Chr1:65030759-65030778 None:intergenic 40.0%
!! GTTTTGTTGCATTTCTCAGG+GGG + Chr1:65030083-65030102 MsG0180003601.01.T01:intron 40.0%
!! TATTCGACTGCTTTTGGATC+TGG - Chr1:65028931-65028950 None:intergenic 40.0%
!! TGCATCCCTTCTTTTTGAGA+CGG + Chr1:65027406-65027425 MsG0180003601.01.T01:five_prime_UTR 40.0%
!! TTGGATCTGGATTTGGTGTT+GGG - Chr1:65028918-65028937 None:intergenic 40.0%
!! TTTGGATCTGGATTTGGTGT+TGG - Chr1:65028919-65028938 None:intergenic 40.0%
!!! GCTTTCTAGTTTTCAAGCCA+TGG + Chr1:65028291-65028310 MsG0180003601.01.T01:intron 40.0%
!!! GGTTTTGTTGCATTTCTCAG+GGG + Chr1:65030082-65030101 MsG0180003601.01.T01:intron 40.0%
AAGACGTCATGGCTCATCAT+GGG - Chr1:65030691-65030710 None:intergenic 45.0%
AAGATCAATCGCTGCTGATC+CGG - Chr1:65033306-65033325 None:intergenic 45.0%
AAGATGAGACGCTGTTGATC+AGG - Chr1:65032850-65032869 None:intergenic 45.0%
AATCCTCTTACCGGAGATCA+AGG + Chr1:65029150-65029169 MsG0180003601.01.T01:CDS 45.0%
AGAAGACGGTAGAACTCTTG+CGG + Chr1:65032885-65032904 MsG0180003601.01.T01:CDS 45.0%
AGCAGCGATTGATCTTTGCT+GGG + Chr1:65033310-65033329 MsG0180003601.01.T01:CDS 45.0%
ATGCAGCCTACCTAAAACGT+AGG + Chr1:65028890-65028909 MsG0180003601.01.T01:CDS 45.0%
ATGGAAACACAGCCATTTCG+TGG + Chr1:65027179-65027198 MsG0180003601.01.T01:five_prime_UTR 45.0%
CAAGAGCTATGCAACTGTGT+TGG + Chr1:65028225-65028244 MsG0180003601.01.T01:intron 45.0%
CAGCAACGATTGATCTTTGC+AGG + Chr1:65033081-65033100 MsG0180003601.01.T01:CDS 45.0%
CATAGGGATAAGCCAACTAC+AGG + Chr1:65027081-65027100 MsG0180003601.01.T01:intron 45.0%
CATTTCTCAGGGGGTTTCAA+CGG + Chr1:65030092-65030111 MsG0180003601.01.T01:intron 45.0%
CCGGCAAAACATAAACCTAG+AGG + Chr1:65032762-65032781 MsG0180003601.01.T01:intron 45.0%
CTACGCTTCATCTTGTTCTC+AGG + Chr1:65033385-65033404 MsG0180003601.01.T01:CDS 45.0%
CTATGCAACTGTGTTGGAAG+AGG + Chr1:65028231-65028250 MsG0180003601.01.T01:intron 45.0%
CTGCTAGAGATGTATTGCCA+GGG + Chr1:65027561-65027580 MsG0180003601.01.T01:CDS 45.0%
GAACAAAGATAAGAGGGCAG+AGG + Chr1:65030274-65030293 MsG0180003601.01.T01:intron 45.0%
GAAGGCGAAGATTCAGGATA+AGG + Chr1:65033269-65033288 MsG0180003601.01.T01:CDS 45.0%
GAGAGTGAGAAAGAAGAGAG+TGG - Chr1:65032702-65032721 None:intergenic 45.0%
GATCAGAAAGACACATACCC+TGG - Chr1:65027581-65027600 None:intergenic 45.0%
GCCGGAAAACAACTAGAAGA+CGG + Chr1:65032871-65032890 MsG0180003601.01.T01:CDS 45.0%
GCGAAGATTCAGGATAAGGA+GGG + Chr1:65033273-65033292 MsG0180003601.01.T01:CDS 45.0%
GGATTGTAGGAATCTCAACC+AGG - Chr1:65030779-65030798 None:intergenic 45.0%
GTAGGAATCTCAACCAGGTT+TGG - Chr1:65030774-65030793 None:intergenic 45.0%
GTGAGAAAGAAGAGAGTGGT+TGG - Chr1:65032698-65032717 None:intergenic 45.0%
GTGCACCGTCTCAAAAAGAA+GGG - Chr1:65027414-65027433 None:intergenic 45.0%
GTGGTCGAAGGACTAATTCA+GGG + Chr1:65029694-65029713 MsG0180003601.01.T01:intron 45.0%
TAACGTGAAGGCGAAGATTC+AGG + Chr1:65033263-65033282 MsG0180003601.01.T01:CDS 45.0%
TCTAACGTTGGATCCACTGT+GGG - Chr1:65028862-65028881 None:intergenic 45.0%
TCTGCTAGAGATGTATTGCC+AGG + Chr1:65027560-65027579 MsG0180003601.01.T01:CDS 45.0%
TGGAAACACAGCCATTTCGT+GGG + Chr1:65027180-65027199 MsG0180003601.01.T01:five_prime_UTR 45.0%
TGGCTTCAACGTCAATACCA+TGG - Chr1:65028311-65028330 None:intergenic 45.0%
TGGTCGAAGGACTAATTCAG+GGG + Chr1:65029695-65029714 MsG0180003601.01.T01:intron 45.0%
TGTCAGAGGATTCTACCTCT+AGG - Chr1:65032780-65032799 None:intergenic 45.0%
TGTCGTCAATGCTTATCCCA+CGG - Chr1:65032492-65032511 None:intergenic 45.0%
TGTGGTCGAAGGACTAATTC+AGG + Chr1:65029693-65029712 MsG0180003601.01.T01:intron 45.0%
TTAGGTAGGCTGCATGTGTA+GGG - Chr1:65028885-65028904 None:intergenic 45.0%
TTCACAAATCCTTTGCGAGG+GGG - Chr1:65030003-65030022 None:intergenic 45.0%
TTGGAAGTTTCGTGCAAGCT+TGG + Chr1:65032463-65032482 MsG0180003601.01.T01:intron 45.0%
TTTAGGTAGGCTGCATGTGT+AGG - Chr1:65028886-65028905 None:intergenic 45.0%
! CAGACAGCAGAGAGAAGTTT+TGG + Chr1:65027448-65027467 MsG0180003601.01.T01:five_prime_UTR 45.0%
! GAAGACGATTACTTTGGAGG+TGG + Chr1:65033221-65033240 MsG0180003601.01.T01:CDS 45.0%
! GCTAGGTTAGTCATTTAGGG+TGG + Chr1:65032300-65032319 MsG0180003601.01.T01:intron 45.0%
! GGGGTTTTTCCAAAAGTGGA+CGG - Chr1:65030041-65030060 None:intergenic 45.0%
! GGTTGTTTCAATCTGGCTTG+CGG - Chr1:65030752-65030771 None:intergenic 45.0%
! GGTTTTCTCTTGGAAAACCC+TGG - Chr1:65030432-65030451 None:intergenic 45.0%
! GTTGTTTCAATCTGGCTTGC+GGG - Chr1:65030751-65030770 None:intergenic 45.0%
! TTGTTTCAATCTGGCTTGCG+GGG - Chr1:65030750-65030769 None:intergenic 45.0%
!! GTACGCTTCATTTGGTTCTG+AGG + Chr1:65033157-65033176 MsG0180003601.01.T01:CDS 45.0%
!! TGGTATTGACGTTGAAGCCA+CGG + Chr1:65028311-65028330 MsG0180003601.01.T01:intron 45.0%
!!! AGGGTGGAGCTAGTTTTGTT+GGG + Chr1:65032316-65032335 MsG0180003601.01.T01:intron 45.0%
!!! AGTCATTTTAGGGTGGAGCT+AGG + Chr1:65032283-65032302 MsG0180003601.01.T01:intron 45.0%
!!! GAAGAGAGTGGTTGGTTTTG+AGG - Chr1:65032690-65032709 None:intergenic 45.0%
!!! TAGGGTGGAGCTAGTTTTGT+TGG + Chr1:65032315-65032334 MsG0180003601.01.T01:intron 45.0%
!! AATTATATTAATAGAATATT+TGG - Chr1:65028352-65028371 None:intergenic 5.0%
ACCAAACACCAGACACGACA+CGG - Chr1:65027322-65027341 None:intergenic 50.0%
AGACGTCATGGCTCATCATG+GGG - Chr1:65030690-65030709 None:intergenic 50.0%
ATCAATCGTTGCTGATCCGG+TGG - Chr1:65033075-65033094 None:intergenic 50.0%
ATGAGACGCTGTTGATCAGG+TGG - Chr1:65032847-65032866 None:intergenic 50.0%
CAAGACGTCATGGCTCATCA+TGG - Chr1:65030692-65030711 None:intergenic 50.0%
CAATGTATCCGTGTCGTGTC+TGG + Chr1:65027311-65027330 MsG0180003601.01.T01:intron 50.0%
CAGCAGCGATTGATCTTTGC+TGG + Chr1:65033309-65033328 MsG0180003601.01.T01:CDS 50.0%
CGAAGATTTGCATGCCACCA+CGG - Chr1:65032957-65032976 None:intergenic 50.0%
CGTGCACCGTCTCAAAAAGA+AGG - Chr1:65027415-65027434 None:intergenic 50.0%
GAATCCAGAACACTGAAGCG+TGG - Chr1:65032576-65032595 None:intergenic 50.0%
GACGGGGAAGACGATTACTT+TGG + Chr1:65033215-65033234 MsG0180003601.01.T01:CDS 50.0%
GATCTTTGCAGGGAAGCAGT+TGG + Chr1:65033092-65033111 MsG0180003601.01.T01:CDS 50.0%
GCATGTGTAGGGTCTAACGT+TGG - Chr1:65028874-65028893 None:intergenic 50.0%
GGATAAGGAGGGAATTCCAC+CGG + Chr1:65033284-65033303 MsG0180003601.01.T01:CDS 50.0%
GGCGAAGATTCAGGATAAGG+AGG + Chr1:65033272-65033291 MsG0180003601.01.T01:CDS 50.0%
GGGGAAGACGATTACTTTGG+AGG + Chr1:65033218-65033237 MsG0180003601.01.T01:CDS 50.0%
GGGGACCTCTTTCCTAAACT+TGG + Chr1:65032444-65032463 MsG0180003601.01.T01:intron 50.0%
GGTACCTAAAAGAGCAACCG+TGG - Chr1:65028331-65028350 None:intergenic 50.0%
GTCAGCACATGACACTGTCA+AGG - Chr1:65027528-65027547 None:intergenic 50.0%
GTCGTCAATGCTTATCCCAC+GGG - Chr1:65032491-65032510 None:intergenic 50.0%
GTCTAACGTTGGATCCACTG+TGG - Chr1:65028863-65028882 None:intergenic 50.0%
TAGAGTTTACCCCCTCGCAA+AGG + Chr1:65029991-65030010 MsG0180003601.01.T01:intron 50.0%
TCACCTTGATCTCCGGTAAG+AGG - Chr1:65029156-65029175 None:intergenic 50.0%
TCCACAGACTATACCCACAG+TGG + Chr1:65028846-65028865 MsG0180003601.01.T01:CDS 50.0%
TCCACTGTGGGTATAGTCTG+TGG - Chr1:65028850-65028869 None:intergenic 50.0%
TCTTTGCTGGGAAACAGCTG+AGG + Chr1:65033322-65033341 MsG0180003601.01.T01:CDS 50.0%
TGAAGCGTGGAGGTTAAGCA+AGG - Chr1:65032563-65032582 None:intergenic 50.0%
! CAATTAGGAGCACACTCGGT+TGG + Chr1:65028800-65028819 MsG0180003601.01.T01:intron 50.0%
! GAAGCCACGGTTGCTCTTTT+AGG + Chr1:65028324-65028343 MsG0180003601.01.T01:intron 50.0%
! GACGTTGTCGATTGTGTCAG+AGG - Chr1:65032794-65032813 None:intergenic 50.0%
! GCGAGGGGTTTTTCCAAAAG+TGG - Chr1:65030045-65030064 None:intergenic 50.0%
! GTGTTGGGCACCTACGTTTT+AGG - Chr1:65028903-65028922 None:intergenic 50.0%
!! CATTTGGTTCTGAGGTTGCG+TGG + Chr1:65033165-65033184 MsG0180003601.01.T01:CDS 50.0%
!! TGGGCACCTACGTTTTAGGT+AGG - Chr1:65028899-65028918 None:intergenic 50.0%
!!! GGGTGGAGCTAGTTTTGTTG+GGG + Chr1:65032317-65032336 MsG0180003601.01.T01:intron 50.0%
AAAGGTAGCGCGCAAGGCTA+AGG - Chr1:65030723-65030742 None:intergenic 55.0%
AACTCCTGCCAGATTGGCGT+GGG - Chr1:65029953-65029972 None:intergenic 55.0%
AAGGTAGCGCGCAAGGCTAA+GGG - Chr1:65030722-65030741 None:intergenic 55.0%
ACCTCCACGCTTCAGTGTTC+TGG + Chr1:65032569-65032588 MsG0180003601.01.T01:intron 55.0%
ATCAATCGCTGCTGATCCGG+TGG - Chr1:65033303-65033322 None:intergenic 55.0%
CAAAAGTGGACGGCTCACGA+CGG - Chr1:65030031-65030050 None:intergenic 55.0%
CAACAGCGTCTCATCTTCGC+CGG + Chr1:65032853-65032872 MsG0180003601.01.T01:CDS 55.0%
CATCTTGTTCTCAGGCTCCG+TGG + Chr1:65033393-65033412 MsG0180003601.01.T01:CDS 55.0%
CGACACACCACGTCAAGTGT+TGG + Chr1:65032507-65032526 MsG0180003601.01.T01:intron 55.0%
CGTGGGGTTGCTCCTATCAA+AGG - Chr1:65029936-65029955 None:intergenic 55.0%
GCAGGGAAGCAGTTGGAAGA+TGG + Chr1:65033099-65033118 MsG0180003601.01.T01:CDS 55.0%
GGGAAACAGCTGAGGATGGA+AGG + Chr1:65033330-65033349 MsG0180003601.01.T01:CDS 55.0%
GGGCTGAATGCAAGACGTCA+TGG - Chr1:65030702-65030721 None:intergenic 55.0%
GGTGAAGCGTGGACTCTTTC+TGG - Chr1:65032921-65032940 None:intergenic 55.0%
TAACTCCTGCCAGATTGGCG+TGG - Chr1:65029954-65029973 None:intergenic 55.0%
TCCAGAACACTGAAGCGTGG+AGG - Chr1:65032573-65032592 None:intergenic 55.0%
TCCGTGTCGTGTCTGGTGTT+TGG + Chr1:65027318-65027337 MsG0180003601.01.T01:intron 55.0%
TGCTGGGAAACAGCTGAGGA+TGG + Chr1:65033326-65033345 MsG0180003601.01.T01:CDS 55.0%
TTTGCATGCCACCACGGAGA+CGG - Chr1:65032951-65032970 None:intergenic 55.0%
!! TTGGTTCTGAGGTTGCGTGG+TGG + Chr1:65033168-65033187 MsG0180003601.01.T01:CDS 55.0%
!!! TTTTTGAGACGGTGCACGCG+TGG + Chr1:65027417-65027436 MsG0180003601.01.T01:five_prime_UTR 55.0%
ACGGAGAACGAGGTGAAGCG+TGG - Chr1:65032932-65032951 None:intergenic 60.0%
ACTCCTGCCAGATTGGCGTG+GGG - Chr1:65029952-65029971 None:intergenic 60.0%
AGACGGTGCACGCGTGGTAT+CGG + Chr1:65027423-65027442 MsG0180003601.01.T01:five_prime_UTR 60.0%
CGTCATGGCTCATCATGGGG+TGG - Chr1:65030687-65030706 None:intergenic 60.0%
CGTGCAAGCTTGGTACCCGT+GGG + Chr1:65032473-65032492 MsG0180003601.01.T01:intron 60.0%
CTTGTTCTCAGGCTCCGTGG+TGG + Chr1:65033396-65033415 MsG0180003601.01.T01:CDS 60.0%
GGCGTTAAAGGTAGCGCGCA+AGG - Chr1:65030729-65030748 None:intergenic 60.0%
GGGGCTAACTCCTGCCAGAT+TGG - Chr1:65029959-65029978 None:intergenic 60.0%
TCGTGCAAGCTTGGTACCCG+TGG + Chr1:65032472-65032491 MsG0180003601.01.T01:intron 60.0%
! CGTCGTGAGCCGTCCACTTT+TGG + Chr1:65030029-65030048 MsG0180003601.01.T01:intron 60.0%
! TCTGGCTTGCGGGGCGTTAA+AGG - Chr1:65030741-65030760 None:intergenic 60.0%
AAGTGGACGGCTCACGACGG+AGG - Chr1:65030028-65030047 None:intergenic 65.0%
CAACCCCACGCCAATCTGGC+AGG + Chr1:65029946-65029965 MsG0180003601.01.T01:intron 65.0%
CACCACGGAGACGGAGAACG+AGG - Chr1:65032942-65032961 None:intergenic 65.0%
CACCTCGTTCTCCGTCTCCG+TGG + Chr1:65032937-65032956 MsG0180003601.01.T01:CDS 65.0%
CTCGTTCTCCGTCTCCGTGG+TGG + Chr1:65032940-65032959 MsG0180003601.01.T01:CDS 65.0%
GGAGCAACCCCACGCCAATC+TGG + Chr1:65029942-65029961 MsG0180003601.01.T01:intron 65.0%
GTTCTCAGGCTCCGTGGTGG+TGG + Chr1:65033399-65033418 MsG0180003601.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr1 gene 65026421 65033431 65026421 ID=MsG0180003601.01;Name=MsG0180003601.01
Chr1 mRNA 65026421 65033431 65026421 ID=MsG0180003601.01.T01;Parent=MsG0180003601.01;Name=MsG0180003601.01.T01;_AED=0.49;_eAED=0.50;_QI=377|0.5|0.6|1|0.5|0.4|5|0|358
Chr1 exon 65026421 65026525 65026421 ID=MsG0180003601.01.T01:exon:50485;Parent=MsG0180003601.01.T01
Chr1 exon 65027086 65027234 65027086 ID=MsG0180003601.01.T01:exon:50486;Parent=MsG0180003601.01.T01
Chr1 exon 65027398 65027582 65027398 ID=MsG0180003601.01.T01:exon:50487;Parent=MsG0180003601.01.T01
Chr1 exon 65028807 65029171 65028807 ID=MsG0180003601.01.T01:exon:50488;Parent=MsG0180003601.01.T01
Chr1 exon 65032782 65033431 65032782 ID=MsG0180003601.01.T01:exon:50489;Parent=MsG0180003601.01.T01
Chr1 five_prime_UTR 65026421 65026525 65026421 ID=MsG0180003601.01.T01:five_prime_utr;Parent=MsG0180003601.01.T01
Chr1 five_prime_UTR 65027086 65027234 65027086 ID=MsG0180003601.01.T01:five_prime_utr;Parent=MsG0180003601.01.T01
Chr1 five_prime_UTR 65027398 65027520 65027398 ID=MsG0180003601.01.T01:five_prime_utr;Parent=MsG0180003601.01.T01
Chr1 CDS 65027521 65027582 65027521 ID=MsG0180003601.01.T01:cds;Parent=MsG0180003601.01.T01
Chr1 CDS 65028807 65029171 65028807 ID=MsG0180003601.01.T01:cds;Parent=MsG0180003601.01.T01
Chr1 CDS 65032782 65033431 65032782 ID=MsG0180003601.01.T01:cds;Parent=MsG0180003601.01.T01
Chr1 mRNA 65026459 65027237 65026459 ID=MsG0180003601.01.T02;Parent=MsG0180003601.01;Name=MsG0180003601.01.T02;_AED=0.50;_eAED=0.66;_QI=0|0|0|1|0|0|2|0|100
Chr1 exon 65026459 65026559 65026459 ID=MsG0180003601.01.T02:exon:50490;Parent=MsG0180003601.01.T02
Chr1 exon 65027036 65027237 65027036 ID=MsG0180003601.01.T02:exon:50491;Parent=MsG0180003601.01.T02
Chr1 CDS 65026459 65026559 65026459 ID=MsG0180003601.01.T02:cds;Parent=MsG0180003601.01.T02
Chr1 CDS 65027036 65027237 65027036 ID=MsG0180003601.01.T02:cds;Parent=MsG0180003601.01.T02
Gene Sequence

>MsG0180003601.01.T01

ATGTCCTTGACAGTGTCATGTGCTGACATTGTTGCTCTTTCTGCTAGAGATGTATTGCCAGGGAGCACACTCGGTTGGAAGAGTACATTGCATGAATTTGGTCCACAGACTATACCCACAGTGGATCCAACGTTAGACCCTACACATGCAGCCTACCTAAAACGTAGGTGCCCAACACCAAATCCAGATCCAAAAGCAGTCGAATATGTGAGGAATGATCTAAAAACTCCAATGATAATTGACAACAACTATTACAAAAACATTTTGCAACATAAGGGTCTTCTAACTGTGGATGAAGAACTAGCTACTGATCCAAGAACATCACCTTATGTAAAAAAAATGGCAGATGATAATGGATACTTCAATGAACAATTCTCAAGGGCTGTTCAATTGTTATCGGAGAATAATCCTCTTACCGGAGATCAAGAGGTAGAATCCTCTGACACAATCGACAACGTCAAAGCCAAAATTCAAGACAAAGAAGGAATTCCACCTGATCAACAGCGTCTCATCTTCGCCGGAAAACAACTAGAAGACGGTAGAACTCTTGCGGATTATAATATCCAGAAAGAGTCCACGCTTCACCTCGTTCTCCGTCTCCGTGGTGGCATGCAAATCTTCGTCAAAACCTTAACAGGGAAAACCATAACCCTAGAAGTTGAATCTTCTGACACAATCGATAACGTGAAGGCAAAGATTCAAGATAAGGAAGGAATTCCACCGGATCAGCAACGATTGATCTTTGCAGGGAAGCAGTTGGAAGATGGTAGAACTCTTGCAGATTATAATATCCAGAAAGAGAGTACGCTTCATTTGGTTCTGAGGTTGCGTGGTGGAATGCAGATCTTTGTAAAGACATTGACGGGGAAGACGATTACTTTGGAGGTGGAGAGTTCTGATACTATTGATAACGTGAAGGCGAAGATTCAGGATAAGGAGGGAATTCCACCGGATCAGCAGCGATTGATCTTTGCTGGGAAACAGCTGAGGATGGAAGGACTCTTGCTGATTATAATATTCAGAAAAGAGTCTACGCTTCATCTTGTTCTCAGGCTCCGTGGTGGTGGCGATGTTTAG

>MsG0180003601.01.T02

ATGGCTAACAAGTCTAGTTCTAATTCCTCTTTCCTCTTTCTATTGCTTCTCCTACATTTTAATTTGGGTACATTTCCTAACTCCTTTTCCTCATTTACTTTATATTGTACCATTTCTACACTAATTATTAATTTCATTTATTTATGCATAGGGATAAGCCAACTACAGGTAAACTACTACTCTAAAAGCTGCCCAAAAGCAGAAGAGATCATCAAGCAACAAGTCAATGAACTGTATAACAAGCATGGAAACACAGCCATTTCGTGGGTTAGAAATCTCTTCCATGATTGCATAGTCAAGTGA
Protein sequence

>MsG0180003601.01.T01

MSLTVSCADIVALSARDVLPGSTLGWKSTLHEFGPQTIPTVDPTLDPTHAAYLKRRCPTPNPDPKAVEYVRNDLKTPMIIDNNYYKNILQHKGLLTVDEELATDPRTSPYVKKMADDNGYFNEQFSRAVQLLSENNPLTGDQEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLRMEGLLLIIIFRKESTLHLVLRLRGGGDV*

>MsG0180003601.01.T02

MANKSSSNSSFLFLLLLLHFNLGTFPNSFSSFTLYCTISTLIINFIYLCIGISQLQVNYYSKSCPKAEEIIKQQVNELYNKHGNTAISWVRNLFHDCIVK*