AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180003607.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180003607.01.T01 MTR_1g066760 71.157 579 69 8 34 590 17 519 0.0 726
MsG0180003607.01.T01 MTR_2g034900 24.361 587 315 20 27 585 13 498 7.44e-29 121
MsG0180003607.01.T01 MTR_4g131510 25.103 486 272 14 116 585 12 421 6.01e-28 117
MsG0180003607.01.T01 MTR_4g121435 24.653 576 323 19 27 585 21 502 1.27e-27 117
MsG0180003607.01.T01 MTR_7g112350 23.850 587 317 19 27 585 15 499 2.71e-27 116
MsG0180003607.01.T01 MTR_1g083810 22.828 587 323 19 27 585 15 499 1.99e-24 107
MsG0180003607.01.T01 MTR_8g027585 25.854 410 229 11 206 587 54 416 5.87e-24 105
MsG0180003607.01.T01 MTR_4g131000 26.351 444 215 16 116 539 12 363 1.45e-18 89.4
MsG0180003607.01.T01 MTR_4g132980 38.667 150 73 4 116 260 12 147 2.68e-18 88.2
MsG0180003607.01.T01 MTR_4g133040 25.307 407 230 14 206 584 71 431 7.38e-17 84.0
MsG0180003607.01.T01 MTR_4g133040 30.303 165 110 4 99 260 6 168 3.07e-14 75.9
MsG0180003607.01.T01 MTR_4g133030 35.135 148 92 3 116 260 9 155 9.99e-17 83.6
MsG0180003607.01.T01 MTR_4g133030 23.364 428 254 14 186 585 38 419 6.34e-16 81.3
MsG0180003607.01.T01 MTR_1g053470 25.794 252 148 6 360 582 51 292 1.34e-16 81.3
MsG0180003607.01.T01 MTR_1g053470 25.794 252 148 6 360 582 51 292 2.17e-16 80.9
MsG0180003607.01.T01 MTR_1g053470 25.794 252 148 6 360 582 51 292 3.94e-16 80.9
MsG0180003607.01.T01 MTR_4g127570 25.203 246 146 5 368 585 114 349 4.17e-15 78.2
MsG0180003607.01.T01 MTR_7g112150 27.053 207 114 6 405 585 321 516 7.11e-14 74.7
MsG0180003607.01.T01 MTR_7g112150 34.965 143 87 3 120 257 110 251 1.05e-13 74.3
MsG0180003607.01.T01 MTR_7g113400 31.156 199 112 5 67 260 75 253 2.37e-12 69.7
MsG0180003607.01.T01 MTR_7g112160 34.932 146 89 3 120 260 110 254 2.43e-12 70.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180003607.01.T01 AT5G03070 58.781 558 174 6 34 590 17 519 0.0 600
MsG0180003607.01.T01 AT1G09270 25.427 586 310 20 27 582 13 501 1.79e-31 129
MsG0180003607.01.T01 AT1G09270 25.427 586 310 20 27 582 13 501 1.79e-31 129
MsG0180003607.01.T01 AT1G09270 25.820 488 262 16 115 582 12 419 2.48e-30 124
MsG0180003607.01.T01 AT1G02690 23.850 587 322 18 27 585 13 502 4.88e-30 124
MsG0180003607.01.T01 AT1G02690 23.850 587 321 18 27 585 13 501 6.11e-30 124
MsG0180003607.01.T01 AT4G02150 23.768 568 313 17 40 582 25 497 3.95e-28 119
MsG0180003607.01.T01 AT4G16143 24.696 494 256 17 120 585 97 502 7.18e-25 109
MsG0180003607.01.T01 AT4G16143 24.696 494 256 17 120 585 97 502 7.18e-25 109
MsG0180003607.01.T01 AT3G06720 24.236 491 256 16 123 585 95 497 1.57e-24 108
MsG0180003607.01.T01 AT3G06720 24.236 491 256 16 123 585 95 497 1.57e-24 108
MsG0180003607.01.T01 AT3G05720 24.942 433 241 16 186 582 105 489 1.43e-23 105
MsG0180003607.01.T01 AT3G05720 24.942 433 241 16 186 582 105 489 1.43e-23 105
MsG0180003607.01.T01 AT5G49310 24.466 421 246 13 186 581 115 488 2.70e-22 101
MsG0180003607.01.T01 AT5G49310 28.980 245 152 9 21 260 6 233 5.24e-18 87.8
MsG0180003607.01.T01 AT4G02150 25.959 443 240 14 40 453 25 408 4.17e-22 99.4
MsG0180003607.01.T01 AT5G52000 34.507 142 85 4 120 260 29 163 3.25e-12 69.3

Find 147 sgRNAs with CRISPR-Local

Find 505 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTCTAGTTGACAAGTATTT+TGG 0.155387 1:-65152235 MsG0180003607.01.T01:CDS
TGATGAAGAACAATCTATTT+TGG 0.188365 1:-65157553 MsG0180003607.01.T01:CDS
AAGGAAGTTGCTTACATATT+AGG 0.201164 1:-65152688 MsG0180003607.01.T01:CDS
CTTAATAGCTCTCTTATATT+CGG 0.250751 1:+65153822 None:intergenic
CTGGTTTCACTTGTTGAAAA+AGG 0.257592 1:-65152607 MsG0180003607.01.T01:CDS
TCTTCTTGTTCTACAAGCTT+TGG 0.289124 1:+65152322 None:intergenic
CGAATATAAGAGAGCTATTA+AGG 0.290150 1:-65153821 MsG0180003607.01.T01:CDS
CTTCTTGTTCTACAAGCTTT+GGG 0.294666 1:+65152323 None:intergenic
ATCGTTGATTATTACAATAT+TGG 0.296480 1:-65159506 MsG0180003607.01.T01:CDS
CTTTGCTTATTGCTCACCTT+GGG 0.308315 1:-65155376 MsG0180003607.01.T01:CDS
TTGGCGGAGAGAAGGCTTAT+TGG 0.309640 1:-65153888 MsG0180003607.01.T01:CDS
CCTCGCTCTCTATATCTTCT+AGG 0.312417 1:+65151877 None:intergenic
ATAAGTTCGTTAGCAGCTTT+AGG 0.319153 1:+65154627 None:intergenic
CTAGTTCAGTGTCTTTCATT+TGG 0.323090 1:-65155603 MsG0180003607.01.T01:CDS
TCGTTAGCAGCTTTAGGATT+TGG 0.327090 1:+65154633 None:intergenic
TTCCATTGGGCATCCCTCTC+AGG 0.332933 1:+65152350 None:intergenic
AAGTGCTTCCATTCAGCGTT+TGG 0.344544 1:-65153788 MsG0180003607.01.T01:CDS
AGGTCAATAGAATCTGTATT+CGG 0.345718 1:-65152064 MsG0180003607.01.T01:three_prime_UTR
TTGAAGACGATTCCAAAGTT+TGG 0.350876 1:-65153907 MsG0180003607.01.T01:CDS
TGAGCAGTGTGCTTGGGCAC+TGG 0.352822 1:-65155051 MsG0180003607.01.T01:CDS
AGCTTTGGGCCCTTTCCATT+GGG 0.361441 1:+65152337 None:intergenic
GACACCATCCATATGCAAAA+TGG 0.366280 1:-65153757 MsG0180003607.01.T01:CDS
CTTCCTTTCTTATATCAAAC+GGG 0.372960 1:+65152704 None:intergenic
TAGGCGCCCTTCAAGAATTA+AGG 0.377792 1:-65155692 MsG0180003607.01.T01:CDS
AAGCTTTGGGCCCTTTCCAT+TGG 0.380490 1:+65152336 None:intergenic
TTTGGAGTCTCAGACTTCAT+TGG 0.383796 1:-65157535 MsG0180003607.01.T01:CDS
AACTGTTAGAACAGCGGCCT+GGG 0.384150 1:-65154931 MsG0180003607.01.T01:CDS
TGCGTTTAGACCTGTTCATC+TGG 0.386763 1:+65155576 None:intergenic
GCCTTCTCTCCGCCAAACTT+TGG 0.387362 1:+65153895 None:intergenic
ATTTGGTTCTCCAGATGAAC+AGG 0.388197 1:-65155586 MsG0180003607.01.T01:intron
TGAAAGACACTGAACTAGTA+TGG 0.390710 1:+65155608 None:intergenic
AGTGCTTCCATTCAGCGTTT+GGG 0.393050 1:-65153787 MsG0180003607.01.T01:CDS
CAAGCACACTGCTCAGCAAC+AGG 0.395722 1:+65155059 None:intergenic
CTTATATTCGGGTGTTCTGT+TGG 0.398682 1:+65153834 None:intergenic
TCTTAATGTTTCACTTACTA+CGG 0.399295 1:+65151824 None:intergenic
CCTTTGCTTATTGCTCACCT+TGG 0.403958 1:-65155377 MsG0180003607.01.T01:CDS
AGTTTAGGTAATCTCGTTGC+TGG 0.405199 1:-65153110 MsG0180003607.01.T01:CDS
TTCTTATGCAGGAAGCAGCC+TGG 0.405306 1:-65152822 MsG0180003607.01.T01:intron
AAATCTGATCCTGGAGCATC+TGG 0.405497 1:-65152626 MsG0180003607.01.T01:CDS
GGCTTTGTCTAATCTAATCA+AGG 0.406769 1:-65154910 MsG0180003607.01.T01:intron
TGTTGCTGAGCAGTGTGCTT+GGG 0.409983 1:-65155057 MsG0180003607.01.T01:CDS
AGGAATGTTCTTCTAATTCA+AGG 0.411220 1:-65154999 MsG0180003607.01.T01:CDS
GGTATCTCGTCGCCTTTAGT+TGG 0.413181 1:+65152649 None:intergenic
AGAGAAGGGAATCGTTGGTT+CGG 0.414285 1:-65157647 MsG0180003607.01.T01:CDS
GAGAGCTATTAAGGCTCTAA+AGG 0.417243 1:-65153812 MsG0180003607.01.T01:CDS
CTGTTGCTGAGCAGTGTGCT+TGG 0.417330 1:-65155058 MsG0180003607.01.T01:CDS
CAACTGTTAGAACAGCGGCC+TGG 0.418690 1:-65154932 MsG0180003607.01.T01:CDS
AACGAACTTATACGTGTTGA+TGG 0.421049 1:-65154615 MsG0180003607.01.T01:CDS
AGATGCTCCAGGATCAGATT+TGG 0.432126 1:+65152628 None:intergenic
GATATTGAAGCTGCCAAGCT+AGG 0.432212 1:-65152547 MsG0180003607.01.T01:CDS
TTAATAGCTCTCTTATATTC+GGG 0.435070 1:+65153823 None:intergenic
AGAGCTATTAAGGCTCTAAA+GGG 0.438763 1:-65153811 MsG0180003607.01.T01:CDS
TGCAGTTGCTTGAAGCTGCT+TGG 0.439775 1:-65155460 MsG0180003607.01.T01:intron
GAGCAGTGTGCTTGGGCACT+GGG 0.441403 1:-65155050 MsG0180003607.01.T01:CDS
GGTCAATAGAATCTGTATTC+GGG 0.442664 1:-65152063 MsG0180003607.01.T01:three_prime_UTR
GCTTTAACAGCAGACTCAAC+AGG 0.444128 1:+65155642 None:intergenic
TGGGCACTGGGAAATGTGGC+TGG 0.447646 1:-65155038 MsG0180003607.01.T01:CDS
ACTTCCTTTCTTATATCAAA+CGG 0.453283 1:+65152703 None:intergenic
CGAGGCGATCCATGAAAAGT+TGG 0.453465 1:-65159532 None:intergenic
GAGAAGGGAATCGTTGGTTC+GGG 0.463219 1:-65157646 MsG0180003607.01.T01:CDS
ATTTGCGTTGCTCCAACTAA+AGG 0.463292 1:-65152661 MsG0180003607.01.T01:CDS
ATTTCCACCCAAACGCTGAA+TGG 0.469679 1:+65153780 None:intergenic
TGTCTTACAAATATTGCTGC+AGG 0.471941 1:-65155437 MsG0180003607.01.T01:CDS
ACTTATGCTGTTCTTGTACC+TGG 0.472062 1:-65153074 MsG0180003607.01.T01:CDS
TCTTATGCAGGAAGCAGCCT+GGG 0.472310 1:-65152821 MsG0180003607.01.T01:intron
CTAGTATTAGAGCTGGATGT+TGG 0.475296 1:-65153946 MsG0180003607.01.T01:CDS
AAATGAAGACGTGAGAACTA+TGG 0.477955 1:-65152263 MsG0180003607.01.T01:CDS
GTTGAGTCTGCTGTTAAAGC+TGG 0.480604 1:-65155639 MsG0180003607.01.T01:CDS
GTAAACGCCTTAATTCTTGA+AGG 0.484486 1:+65155685 None:intergenic
CTTAATGTTTCACTTACTAC+GGG 0.486167 1:+65151825 None:intergenic
TCATTGGTCTTGTGATAGAC+TGG 0.491016 1:-65151993 MsG0180003607.01.T01:three_prime_UTR
AGAGGGATGCCCAATGGAAA+GGG 0.491824 1:-65152346 MsG0180003607.01.T01:CDS
CATTCTTGCAAGAGGTACTA+AGG 0.496077 1:+65154974 None:intergenic
CGACAACTTGCAGTTACAGT+TGG 0.497834 1:-65157675 MsG0180003607.01.T01:CDS
CTAACAGTTGAACGTCTGTA+TGG 0.500439 1:+65154945 None:intergenic
GACAACTTGCAGTTACAGTT+GGG 0.500791 1:-65157674 MsG0180003607.01.T01:CDS
ATCAAAGTACAACTCCTCAT+TGG 0.502102 1:+65153858 None:intergenic
GTGAAACTGAAATCTTTCCA+TGG 0.506366 1:+65152288 None:intergenic
GCAAAACGACTTTGTAGAGT+TGG 0.512112 1:-65157624 MsG0180003607.01.T01:CDS
TGCTTGGGCACTGGGAAATG+TGG 0.512591 1:-65155042 MsG0180003607.01.T01:CDS
TCCAAAGTTTGGCGGAGAGA+AGG 0.512907 1:-65153896 MsG0180003607.01.T01:CDS
AGGGCTTCAGTTTATAGAGC+TGG 0.513753 1:-65152527 MsG0180003607.01.T01:intron
AAGCTTGTAGAACAAGAAGA+TGG 0.514390 1:-65152319 MsG0180003607.01.T01:CDS
GCAATAAGCAAAGGCAATGC+AGG 0.520043 1:+65155386 None:intergenic
CGAGATACCAAATCTGATCC+TGG 0.525748 1:-65152635 MsG0180003607.01.T01:CDS
TATACGTGTTGATGGAGTAT+TGG 0.529161 1:-65154607 MsG0180003607.01.T01:CDS
AAATTTAGCTACCACCATGC+TGG 0.529346 1:-65153323 MsG0180003607.01.T01:CDS
AAGACGATTCCAAAGTTTGG+CGG 0.529410 1:-65153904 MsG0180003607.01.T01:CDS
GGAATGTTCTTCTAATTCAA+GGG 0.530928 1:-65154998 MsG0180003607.01.T01:CDS
TACAGTTGGGAAAGAGAGAA+GGG 0.532165 1:-65157661 MsG0180003607.01.T01:CDS
ATATTGAAGCTGCCAAGCTA+GGG 0.532211 1:-65152546 MsG0180003607.01.T01:CDS
TATATCTTCTAGGTCGCAGC+TGG 0.533543 1:+65151887 None:intergenic
TATAAACTGAAGCCCTAGCT+TGG 0.533958 1:+65152534 None:intergenic
GAGAGGGATGCCCAATGGAA+AGG 0.535122 1:-65152347 MsG0180003607.01.T01:CDS
TTTGCTTATTGCTCACCTTG+GGG 0.539936 1:-65155375 MsG0180003607.01.T01:CDS
AGAAGATGGGATTGAAGCCA+TGG 0.541772 1:-65152305 MsG0180003607.01.T01:CDS
AAAACTAATACTCGAGTCGT+TGG 0.543787 1:-65159477 MsG0180003607.01.T01:CDS
TTATCAACTAGTATTAGAGC+TGG 0.546175 1:-65153953 MsG0180003607.01.T01:CDS
AATCAGCTACTGAAGTAGCA+TGG 0.551163 1:-65153372 MsG0180003607.01.T01:CDS
CAAGAACAGCATAAGTTGCA+TGG 0.554473 1:+65153081 None:intergenic
GGCTGAATATTCTTCATCAA+AGG 0.554559 1:-65152084 MsG0180003607.01.T01:three_prime_UTR
AATCTGTATTCGGGATTGAG+AGG 0.557646 1:-65152054 MsG0180003607.01.T01:three_prime_UTR
TTGCTTATTGCTCACCTTGG+GGG 0.560167 1:-65155374 MsG0180003607.01.T01:intron
TTACAGTTGGGAAAGAGAGA+AGG 0.563246 1:-65157662 MsG0180003607.01.T01:CDS
GTGCTGTCTAATATAGCTGC+TGG 0.563333 1:-65152799 MsG0180003607.01.T01:CDS
CTAACCAAATCAATAAAACC+TGG 0.564282 1:+65152577 None:intergenic
AAGAACAGCATAAGTTGCAT+GGG 0.568828 1:+65153082 None:intergenic
GCTTCCATTCAGCGTTTGGG+TGG 0.569177 1:-65153784 MsG0180003607.01.T01:CDS
CCTAGAAGATATAGAGAGCG+AGG 0.570371 1:-65151877 MsG0180003607.01.T01:three_prime_UTR
CGCCCCGTTTGATATAAGAA+AGG 0.574782 1:-65152707 MsG0180003607.01.T01:CDS
ATCAGCTACTGAAGTAGCAT+GGG 0.577005 1:-65153371 MsG0180003607.01.T01:CDS
TTGTGTCTGTAGGTCCTGAG+AGG 0.583904 1:-65152364 MsG0180003607.01.T01:intron
GAAAGAGAGAAGGGAATCGT+TGG 0.584793 1:-65157652 MsG0180003607.01.T01:CDS
AGCTTGTAGAACAAGAAGAT+GGG 0.586537 1:-65152318 MsG0180003607.01.T01:CDS
TACGACATGGAGTTGAGGCA+AGG 0.591144 1:+65152135 None:intergenic
TAGAGCTGGATGTTGGATTG+TGG 0.592446 1:-65153939 MsG0180003607.01.T01:CDS
GGTGCAGTGCAGAAAAGAGT+AGG 0.594300 1:-65155711 MsG0180003607.01.T01:CDS
CCATCCATATGCAAAATGGC+GGG 0.596257 1:-65153753 MsG0180003607.01.T01:CDS
TAAACGCCTTAATTCTTGAA+GGG 0.597032 1:+65155686 None:intergenic
TAGCCTGTAACTTCAAGTCC+AGG 0.598877 1:+65153056 None:intergenic
GATTAGATTAGACAAAGCCC+AGG 0.612593 1:+65154914 None:intergenic
GTCCTGAGAGGGATGCCCAA+TGG 0.612830 1:-65152352 MsG0180003607.01.T01:CDS
ACCATCCATATGCAAAATGG+CGG 0.613450 1:-65153754 MsG0180003607.01.T01:CDS
CCAAGGTGAGCAATAAGCAA+AGG 0.619253 1:+65155377 None:intergenic
CAAGTGAAACCAGATGCTCC+AGG 0.620229 1:+65152617 None:intergenic
GGTAGCATCATTCTTGCAAG+AGG 0.624604 1:+65154966 None:intergenic
TACGTCACTCTTCACCAGCA+TGG 0.624636 1:+65153309 None:intergenic
CTAGAAGATATAGAGAGCGA+GGG 0.625459 1:-65151876 MsG0180003607.01.T01:three_prime_UTR
GTCTTACAAATATTGCTGCA+GGG 0.625717 1:-65155436 MsG0180003607.01.T01:CDS
GAATGTTCTTCTAATTCAAG+GGG 0.631308 1:-65154997 MsG0180003607.01.T01:CDS
ATTTAAGTGACAAACATACA+TGG 0.635234 1:-65152105 MsG0180003607.01.T01:three_prime_UTR
ACGACATGGAGTTGAGGCAA+GGG 0.635732 1:+65152136 None:intergenic
TGTGTCTGTAGGTCCTGAGA+GGG 0.639506 1:-65152363 MsG0180003607.01.T01:intron
TTCCTTTCTTATATCAAACG+GGG 0.643067 1:+65152705 None:intergenic
GCAATTGATATATTCTAGCG+AGG 0.651258 1:-65152761 MsG0180003607.01.T01:CDS
TTATTGGTTGCTGACCAATG+AGG 0.659779 1:-65153872 MsG0180003607.01.T01:CDS
CTACATACGACATGGAGTTG+AGG 0.671337 1:+65152130 None:intergenic
TTAAATTGCTACATACGACA+TGG 0.671560 1:+65152122 None:intergenic
ACACTGCTCAGCAACAGGTG+AGG 0.682808 1:+65155064 None:intergenic
ATGGGCTTGATGAGTAGTAG+CGG 0.685874 1:-65152204 MsG0180003607.01.T01:exon
TATTGCTGCAGGGAATCCAG+AGG 0.701168 1:-65155426 MsG0180003607.01.T01:CDS
CTTTCTTATATCAAACGGGG+CGG 0.704141 1:+65152708 None:intergenic
TTAACAGCAGACTCAACAGG+AGG 0.709103 1:+65155645 None:intergenic
AGCTATATTAGACAGCACCC+AGG 0.713093 1:+65152804 None:intergenic
CTGGTGAAGATGAAGAGTTG+AGG 0.724921 1:-65155019 MsG0180003607.01.T01:CDS
ACGTTCAACTGTTAGAACAG+CGG 0.727420 1:-65154937 MsG0180003607.01.T01:CDS
GTCACTCTTCACCAGCATGG+TGG 0.734340 1:+65153312 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTAATATAACAATAATC+AGG + Chr1:65157917-65157936 None:intergenic 10.0%
!! AATTAATATAACAATAATCA+GGG + Chr1:65157916-65157935 None:intergenic 10.0%
!! TAATAAATCATTTAGAAATT+TGG + Chr1:65157678-65157697 None:intergenic 10.0%
!! TAATATTTGATTCAATAATT+TGG - Chr1:65158464-65158483 MsG0180003607.01.T01:intron 10.0%
!!! AATGATTTATTAACTTATTT+TGG - Chr1:65157686-65157705 MsG0180003607.01.T01:CDS 10.0%
!!! ATATATTTTTTAATTGATAG+GGG - Chr1:65155595-65155614 MsG0180003607.01.T01:CDS 10.0%
!!! CTATATATTTTTTAATTGAT+AGG - Chr1:65155593-65155612 MsG0180003607.01.T01:CDS 10.0%
!!! TTAAACTTTTTATTTTTGTA+TGG - Chr1:65153869-65153888 MsG0180003607.01.T01:CDS 10.0%
!!! TTTTATTTAGATAAATTGTT+AGG - Chr1:65157050-65157069 MsG0180003607.01.T01:intron 10.0%
!! AAAGATAAAATAAAGTCAAA+TGG - Chr1:65154110-65154129 MsG0180003607.01.T01:intron 15.0%
!! ATAAATAAGAAATGGTTTAA+TGG + Chr1:65157650-65157669 None:intergenic 15.0%
!! CTTTATATCTATAGAAATAT+AGG + Chr1:65156014-65156033 None:intergenic 15.0%
!! TAAATAAGAAATGGTTTAAT+GGG + Chr1:65157649-65157668 None:intergenic 15.0%
!! TTTCTTAGTTTATGATAATT+AGG - Chr1:65153896-65153915 MsG0180003607.01.T01:CDS 15.0%
!!! AAACCATTTCTTATTTATTT+TGG - Chr1:65157652-65157671 MsG0180003607.01.T01:CDS 15.0%
!!! ATACCTTTAATTTTAAAAAG+AGG - Chr1:65152831-65152850 MsG0180003607.01.T01:intron 15.0%
!!! ATCTAAACTTTTAATATTGT+AGG - Chr1:65154713-65154732 MsG0180003607.01.T01:intron 15.0%
!!! ATTCCTCTTTTTAAAATTAA+AGG + Chr1:65152837-65152856 None:intergenic 15.0%
!!! TAACGAAAAAAGATTTTAAT+CGG + Chr1:65152984-65153003 None:intergenic 15.0%
!!! TACATGGAAATATTATTTTT+TGG - Chr1:65157835-65157854 MsG0180003607.01.T01:intron 15.0%
!!! TATATTTTTTAATTGATAGG+GGG - Chr1:65155596-65155615 MsG0180003607.01.T01:CDS 15.0%
!!! TCTAAACTTTTAATATTGTA+GGG - Chr1:65154714-65154733 MsG0180003607.01.T01:intron 15.0%
!!! TTTTTATAATAAAGACCAAA+AGG - Chr1:65152640-65152659 MsG0180003607.01.T01:CDS 15.0%
!!! TTTTTGTTTCTAATAACAAT+GGG - Chr1:65158179-65158198 MsG0180003607.01.T01:intron 15.0%
!!! TTTTTTGTTTCTAATAACAA+TGG - Chr1:65158178-65158197 MsG0180003607.01.T01:intron 15.0%
!! AAAATCAATCTGAATAATTG+TGG + Chr1:65158162-65158181 None:intergenic 20.0%
!! AAATAAGAAATGGTTTAATG+GGG + Chr1:65157648-65157667 None:intergenic 20.0%
!! ACAATAAATCATAAACAACA+CGG + Chr1:65158953-65158972 None:intergenic 20.0%
!! ACAATCACAAATTTAATAAG+TGG - Chr1:65152585-65152604 MsG0180003607.01.T01:CDS 20.0%
!! ACATATACTTAAACACAAAT+AGG - Chr1:65151992-65152011 MsG0180003607.01.T01:three_prime_UTR 20.0%
!! ACTATTATTAAAAGACACAT+AGG + Chr1:65154306-65154325 None:intergenic 20.0%
!! ATGAAATATATTAACTGTAG+TGG + Chr1:65156944-65156963 None:intergenic 20.0%
!! CAAAAGTTATATAATCAAAG+AGG - Chr1:65157609-65157628 MsG0180003607.01.T01:CDS 20.0%
!! CTATAGATATAAAGATTTAG+AGG - Chr1:65156020-65156039 MsG0180003607.01.T01:intron 20.0%
!! GTAAAAATTAAGAAGAGAAT+GGG - Chr1:65154800-65154819 MsG0180003607.01.T01:intron 20.0%
!! TAAAAATTAAGAAGAGAATG+GGG - Chr1:65154801-65154820 MsG0180003607.01.T01:intron 20.0%
!! TAAACATCTATGAACTTATA+AGG - Chr1:65154396-65154415 MsG0180003607.01.T01:intron 20.0%
!! TAGCTTCTAAGTTTAAAAAA+AGG + Chr1:65152384-65152403 None:intergenic 20.0%
!! TATAGAAATATAGGTCAAAA+AGG + Chr1:65156005-65156024 None:intergenic 20.0%
!! TATAGTTGCAAAATTAATGA+AGG + Chr1:65156158-65156177 None:intergenic 20.0%
!! TATATTCAATGGGTATATTA+TGG + Chr1:65152529-65152548 None:intergenic 20.0%
!! TATGATAATTAGGTTTAGAA+TGG - Chr1:65153906-65153925 MsG0180003607.01.T01:CDS 20.0%
!! TGAATGTATAAATAACTACT+TGG - Chr1:65158842-65158861 MsG0180003607.01.T01:intron 20.0%
!! TGACTTCTAAGTTTAAAAAA+AGG + Chr1:65152475-65152494 None:intergenic 20.0%
!! TGATAAAGGAAAAATAAACT+AGG + Chr1:65152062-65152081 None:intergenic 20.0%
!! TGTAAAAATTAAGAAGAGAA+TGG - Chr1:65154799-65154818 MsG0180003607.01.T01:intron 20.0%
!! TGTATGTAATATTCATTTGA+TGG + Chr1:65156457-65156476 None:intergenic 20.0%
!! TTAATTTCCATTACAATGAA+GGG + Chr1:65152790-65152809 None:intergenic 20.0%
!! TTACAATGCTTTAACAATTA+AGG + Chr1:65156057-65156076 None:intergenic 20.0%
!!! AAAAAAATTGTTTTCTTGTG+GGG - Chr1:65155101-65155120 MsG0180003607.01.T01:intron 20.0%
!!! AATCTTTTTTCGTTAAACAT+TGG - Chr1:65152989-65153008 MsG0180003607.01.T01:intron 20.0%
!!! AATTTTATTTTATCACCTCA+GGG - Chr1:65157932-65157951 MsG0180003607.01.T01:intron 20.0%
!!! AGAAAAAAATTGTTTTCTTG+TGG - Chr1:65155099-65155118 MsG0180003607.01.T01:intron 20.0%
!!! AGTTTATTTTTCCTTTATCA+GGG - Chr1:65152062-65152081 MsG0180003607.01.T01:three_prime_UTR 20.0%
!!! ATAACACTTCTAAAAATCTA+CGG + Chr1:65156573-65156592 None:intergenic 20.0%
!!! ATCGTTGATTATTACAATAT+TGG - Chr1:65151827-65151846 MsG0180003607.01.T01:three_prime_UTR 20.0%
!!! CTAAACTTTTAATATTGTAG+GGG - Chr1:65154715-65154734 MsG0180003607.01.T01:intron 20.0%
!!! GAAAAAAATTGTTTTCTTGT+GGG - Chr1:65155100-65155119 MsG0180003607.01.T01:intron 20.0%
!!! TAATTTTATTTTATCACCTC+AGG - Chr1:65157931-65157950 MsG0180003607.01.T01:intron 20.0%
!!! TAGTTTATTTTTCCTTTATC+AGG - Chr1:65152061-65152080 MsG0180003607.01.T01:three_prime_UTR 20.0%
!!! TGAACTTATAAGGAATTTTT+TGG - Chr1:65154406-65154425 MsG0180003607.01.T01:intron 20.0%
!!! TGTAATCATACATTTTATAG+TGG - Chr1:65152087-65152106 MsG0180003607.01.T01:three_prime_UTR 20.0%
!!! TTCTATTCATGTAATTCTTT+TGG + Chr1:65154904-65154923 None:intergenic 20.0%
!!! TTCTCTTCTTAATTTTTACA+CGG + Chr1:65154799-65154818 None:intergenic 20.0%
! AAAAATTAAGAAGAGAATGG+GGG - Chr1:65154802-65154821 MsG0180003607.01.T01:intron 25.0%
! AACTTATTCAATGAATCTAG+TGG + Chr1:65152614-65152633 None:intergenic 25.0%
! AATAAATCATAAACAACACG+GGG + Chr1:65158951-65158970 None:intergenic 25.0%
! AATAACTACTTGGTAGATTA+TGG - Chr1:65158852-65158871 MsG0180003607.01.T01:intron 25.0%
! AATCCTTATATCAAATTGTG+TGG + Chr1:65152880-65152899 None:intergenic 25.0%
! ACATTAAGAAAGAAATACCT+TGG - Chr1:65159523-65159542 MsG0180003607.01.T01:CDS 25.0%
! ACTAACTTGAATTTATCTAC+TGG + Chr1:65154269-65154288 None:intergenic 25.0%
! ACTTATTCAATGAATCTAGT+GGG + Chr1:65152613-65152632 None:intergenic 25.0%
! ACTTCCTTTCTTATATCAAA+CGG + Chr1:65158633-65158652 None:intergenic 25.0%
! AGTGAACTTTATGATTATAG+TGG + Chr1:65157748-65157767 None:intergenic 25.0%
! ATGAACACACATATATTCAA+TGG + Chr1:65152540-65152559 None:intergenic 25.0%
! ATGTACTTGAATCAGTTAAT+AGG - Chr1:65154502-65154521 MsG0180003607.01.T01:intron 25.0%
! ATTTAAGTGACAAACATACA+TGG - Chr1:65159228-65159247 MsG0180003607.01.T01:intron 25.0%
! ATTTATTTGTGTCTTCTAAC+AGG + Chr1:65154606-65154625 None:intergenic 25.0%
! ATTTCAGTATGTTTGCATAT+AGG - Chr1:65156675-65156694 MsG0180003607.01.T01:intron 25.0%
! CAATAAATCATAAACAACAC+GGG + Chr1:65158952-65158971 None:intergenic 25.0%
! CATACTGTTTGATTAAAATG+CGG + Chr1:65158335-65158354 None:intergenic 25.0%
! CATATAAAAACACATGTATG+TGG + Chr1:65156655-65156674 None:intergenic 25.0%
! CATTATAATGAAGTTCTTCA+AGG - Chr1:65156183-65156202 MsG0180003607.01.T01:intron 25.0%
! CTAGTAAAATTATGACTACA+TGG - Chr1:65157819-65157838 MsG0180003607.01.T01:intron 25.0%
! CTTAATAGCTCTCTTATATT+CGG + Chr1:65157514-65157533 None:intergenic 25.0%
! GAAGAACTTCATTATAATGT+TGG + Chr1:65156182-65156201 None:intergenic 25.0%
! GTATAAATCCTAGTTTACTA+GGG - Chr1:65151935-65151954 MsG0180003607.01.T01:three_prime_UTR 25.0%
! GTTAATTTCCATTACAATGA+AGG + Chr1:65152791-65152810 None:intergenic 25.0%
! TACACACATAATAGTTATGA+AGG - Chr1:65154874-65154893 MsG0180003607.01.T01:intron 25.0%
! TCAAAGTGAATATTCACTTA+AGG - Chr1:65152228-65152247 MsG0180003607.01.T01:CDS 25.0%
! TCTTAATGTTTCACTTACTA+CGG + Chr1:65159512-65159531 None:intergenic 25.0%
! TCTTTGTATCTTATAATTGC+TGG - Chr1:65154007-65154026 MsG0180003607.01.T01:intron 25.0%
! TGAACACACATATATTCAAT+GGG + Chr1:65152539-65152558 None:intergenic 25.0%
! TGACTTCTAGGTTTAAAAAA+AGG + Chr1:65152295-65152314 None:intergenic 25.0%
! TGGCCAAAATAAATAAGAAA+TGG + Chr1:65157658-65157677 None:intergenic 25.0%
! TGTATAAATCCTAGTTTACT+AGG - Chr1:65151934-65151953 MsG0180003607.01.T01:three_prime_UTR 25.0%
! TGTATCTCATTTGTTCTTAT+AGG - Chr1:65154352-65154371 MsG0180003607.01.T01:intron 25.0%
! TTAATAGCTCTCTTATATTC+GGG + Chr1:65157513-65157532 None:intergenic 25.0%
! TTATAACGGTACATGAAAAT+GGG + Chr1:65153374-65153393 None:intergenic 25.0%
! TTATGATTTATTGTGTCTGT+AGG - Chr1:65158959-65158978 MsG0180003607.01.T01:intron 25.0%
! TTCATAACTATTATGTGTGT+AGG + Chr1:65154875-65154894 None:intergenic 25.0%
! TTCTCCTTGTATATATTTAC+CGG + Chr1:65153153-65153172 None:intergenic 25.0%
! TTGTAAGATATCTACATCTA+AGG - Chr1:65156071-65156090 MsG0180003607.01.T01:intron 25.0%
! TTTACCGGTAAATATATACA+AGG - Chr1:65153146-65153165 MsG0180003607.01.T01:intron 25.0%
! TTTATAACGGTACATGAAAA+TGG + Chr1:65153375-65153394 None:intergenic 25.0%
! TTTCAGTATGTTTGCATATA+GGG - Chr1:65156676-65156695 MsG0180003607.01.T01:intron 25.0%
!! AAAAAATTGTTTTCTTGTGG+GGG - Chr1:65155102-65155121 MsG0180003607.01.T01:intron 25.0%
!! AATAAGACGAAAACAACTTT+TGG - Chr1:65154188-65154207 MsG0180003607.01.T01:intron 25.0%
!! ACCTTTAAATATTGATTGTG+AGG - Chr1:65154648-65154667 MsG0180003607.01.T01:intron 25.0%
!! ACGAAAACTTATATTCCTTT+TGG + Chr1:65152658-65152677 None:intergenic 25.0%
!! AGGTTTGATAAAATTTTCTG+CGG - Chr1:65159299-65159318 MsG0180003607.01.T01:intron 25.0%
!! ATCAACTAAATTTTATCGAC+CGG + Chr1:65154681-65154700 None:intergenic 25.0%
!! CCTTTAAATATTGATTGTGA+GGG - Chr1:65154649-65154668 MsG0180003607.01.T01:intron 25.0%
!! TCTCTTCTTAATTTTTACAC+GGG + Chr1:65154798-65154817 None:intergenic 25.0%
!! TGAAGTTCATGAAATTTTTG+TGG - Chr1:65157710-65157729 MsG0180003607.01.T01:intron 25.0%
!! TGATGAAGAACAATCTATTT+TGG - Chr1:65153780-65153799 MsG0180003607.01.T01:CDS 25.0%
!! TGTAGTCATAATTTTACTAG+AGG + Chr1:65157819-65157838 None:intergenic 25.0%
!! TTAAATAGCTTTACCTTCAT+TGG + Chr1:65155209-65155228 None:intergenic 25.0%
!!! TATAGTGGATCAATATCTTT+TGG - Chr1:65152102-65152121 MsG0180003607.01.T01:three_prime_UTR 25.0%
!!! TCAGTTTTGACTTTAACTAT+TGG + Chr1:65154982-65155001 None:intergenic 25.0%
!!! TTTCTAGCTACATAATCAAA+CGG + Chr1:65152701-65152720 None:intergenic 25.0%
AAAAAGAATAGGATGCAAGT+AGG + Chr1:65156123-65156142 None:intergenic 30.0%
AAAATTAAGAAGAGAATGGG+GGG - Chr1:65154803-65154822 MsG0180003607.01.T01:intron 30.0%
AAAATTCTCGAGATTCTTAC+TGG + Chr1:65158104-65158123 None:intergenic 30.0%
AAACACAAATAGGTCTGAAA+GGG - Chr1:65152002-65152021 MsG0180003607.01.T01:three_prime_UTR 30.0%
AACTATGAACCAATTTGGAT+TGG + Chr1:65154458-65154477 None:intergenic 30.0%
AAGGAAGTTGCTTACATATT+AGG - Chr1:65158645-65158664 MsG0180003607.01.T01:intron 30.0%
AATCTTTGTTCATCGTAAAC+AGG + Chr1:65155170-65155189 None:intergenic 30.0%
ACACAAACTATGAACCAATT+TGG + Chr1:65154463-65154482 None:intergenic 30.0%
AGGAATGTTCTTCTAATTCA+AGG - Chr1:65156334-65156353 MsG0180003607.01.T01:intron 30.0%
AGGTCAATAGAATCTGTATT+CGG - Chr1:65159269-65159288 MsG0180003607.01.T01:intron 30.0%
AGTAACTGAACACATAACAA+AGG - Chr1:65154947-65154966 MsG0180003607.01.T01:CDS 30.0%
AGTCCACACAATTTGATATA+AGG - Chr1:65152874-65152893 MsG0180003607.01.T01:intron 30.0%
AGTGTACCTGATGATTTAAT+AGG + Chr1:65153493-65153512 None:intergenic 30.0%
AGTTGCAAAATTAATGAAGG+TGG + Chr1:65156155-65156174 None:intergenic 30.0%
ATCTACATCTAAGGAAAGAA+TGG - Chr1:65156080-65156099 MsG0180003607.01.T01:intron 30.0%
ATCTACCCATTGATATATGA+AGG - Chr1:65152406-65152425 MsG0180003607.01.T01:intron 30.0%
ATCTTATAATTGCTGGTGAT+AGG - Chr1:65154014-65154033 MsG0180003607.01.T01:intron 30.0%
ATCTTTGTTCATCGTAAACA+GGG + Chr1:65155169-65155188 None:intergenic 30.0%
ATGATTACAATCCCTGATAA+AGG + Chr1:65152076-65152095 None:intergenic 30.0%
ATTTCATACAACATAGCTCT+AGG - Chr1:65153552-65153571 MsG0180003607.01.T01:intron 30.0%
ATTTCCCCTTCATATATCAA+TGG + Chr1:65152415-65152434 None:intergenic 30.0%
CAAGAAGAAGAAACAAAGAA+CGG - Chr1:65154747-65154766 MsG0180003607.01.T01:intron 30.0%
CATAAAGTTCACTTTCCTAT+AGG - Chr1:65157755-65157774 MsG0180003607.01.T01:intron 30.0%
CCCTCACAATCAATATTTAA+AGG + Chr1:65154652-65154671 None:intergenic 30.0%
CGAATATAAGAGAGCTATTA+AGG - Chr1:65157512-65157531 MsG0180003607.01.T01:CDS 30.0%
CTAACCAAATCAATAAAACC+TGG + Chr1:65158759-65158778 None:intergenic 30.0%
CTCTAATGATGATAGGTTAA+GGG + Chr1:65152505-65152524 None:intergenic 30.0%
CTTAATGTTTCACTTACTAC+GGG + Chr1:65159511-65159530 None:intergenic 30.0%
CTTCCTTTCTTATATCAAAC+GGG + Chr1:65158632-65158651 None:intergenic 30.0%
GAATGTTCTTCTAATTCAAG+GGG - Chr1:65156336-65156355 MsG0180003607.01.T01:intron 30.0%
GGAATGTTCTTCTAATTCAA+GGG - Chr1:65156335-65156354 MsG0180003607.01.T01:intron 30.0%
GGCTGAATGTTATTATTTAC+CGG - Chr1:65153131-65153150 MsG0180003607.01.T01:intron 30.0%
GTAATAAGCTCCACATTATT+GGG + Chr1:65153341-65153360 None:intergenic 30.0%
GTGTACCTGATGATTTAATA+GGG + Chr1:65153492-65153511 None:intergenic 30.0%
GTGTGAAGAATTTGATTGAA+GGG - Chr1:65154841-65154860 MsG0180003607.01.T01:intron 30.0%
GTTGCAAAATTAATGAAGGT+GGG + Chr1:65156154-65156173 None:intergenic 30.0%
TAAACACAAATAGGTCTGAA+AGG - Chr1:65152001-65152020 MsG0180003607.01.T01:three_prime_UTR 30.0%
TAAACGCCTTAATTCTTGAA+GGG + Chr1:65155650-65155669 None:intergenic 30.0%
TCTACATCTAAGGAAAGAAT+GGG - Chr1:65156081-65156100 MsG0180003607.01.T01:intron 30.0%
TCTACCCATTGATATATGAA+GGG - Chr1:65152407-65152426 MsG0180003607.01.T01:intron 30.0%
TCTCAAGAAATTGAGCTATA+GGG - Chr1:65154054-65154073 MsG0180003607.01.T01:intron 30.0%
TCTCTAATGATGATAGGTTA+AGG + Chr1:65152506-65152525 None:intergenic 30.0%
TCTTATAATTGCTGGTGATA+GGG - Chr1:65154015-65154034 MsG0180003607.01.T01:intron 30.0%
TGATAATTTCATATGCATGC+AGG - Chr1:65155391-65155410 MsG0180003607.01.T01:CDS 30.0%
TGATTAGCAAATAGTTGTGT+TGG - Chr1:65155301-65155320 MsG0180003607.01.T01:intron 30.0%
TGCTAATCATGTGTCAAATA+TGG + Chr1:65155290-65155309 None:intergenic 30.0%
TGTGTGAAGAATTTGATTGA+AGG - Chr1:65154840-65154859 MsG0180003607.01.T01:intron 30.0%
TGTTTCCATATAAGCTATCT+TGG - Chr1:65154153-65154172 MsG0180003607.01.T01:intron 30.0%
TTAAATTGCTACATACGACA+TGG + Chr1:65159214-65159233 None:intergenic 30.0%
TTATCAACTAGTATTAGAGC+TGG - Chr1:65157380-65157399 MsG0180003607.01.T01:intron 30.0%
TTATGGTCTCTAATGATGAT+AGG + Chr1:65152512-65152531 None:intergenic 30.0%
TTCCTTTCTTATATCAAACG+GGG + Chr1:65158631-65158650 None:intergenic 30.0%
TTCTCAAGAAATTGAGCTAT+AGG - Chr1:65154053-65154072 MsG0180003607.01.T01:intron 30.0%
TTTACAAATGCCCAATAATG+TGG - Chr1:65153328-65153347 MsG0180003607.01.T01:CDS 30.0%
TTTCCCCTTCATATATCAAT+GGG + Chr1:65152414-65152433 None:intergenic 30.0%
! AGTCTAGTTGACAAGTATTT+TGG - Chr1:65159098-65159117 MsG0180003607.01.T01:intron 30.0%
! ATTATGGTTTTTGTGGAAGA+TGG - Chr1:65156623-65156642 MsG0180003607.01.T01:intron 30.0%
! CAGTTACTTTATAACATGCA+TGG - Chr1:65156844-65156863 MsG0180003607.01.T01:intron 30.0%
! CATCAAATTTGTTTCAAGTG+TGG - Chr1:65152557-65152576 MsG0180003607.01.T01:CDS 30.0%
! GATTGGAGTTCTAATAGATT+TGG - Chr1:65157136-65157155 MsG0180003607.01.T01:intron 30.0%
! GGACTACTTATGAATTTTGA+AGG + Chr1:65156230-65156249 None:intergenic 30.0%
! TGTGGTTATACTCTTTTCAT+TGG - Chr1:65159324-65159343 MsG0180003607.01.T01:intron 30.0%
! TTTGGTTCATCACTGATATA+GGG - Chr1:65157292-65157311 MsG0180003607.01.T01:intron 30.0%
! TTTTAAGCTCAGAAACCTAT+AGG + Chr1:65157773-65157792 None:intergenic 30.0%
!! AGTATGTCTAGTTTGTTTGA+CGG - Chr1:65155045-65155064 MsG0180003607.01.T01:CDS 30.0%
!! CGCATTTTAATCAAACAGTA+TGG - Chr1:65158333-65158352 MsG0180003607.01.T01:intron 30.0%
!! GGGCATTTTAGAAAAAGAAT+AGG + Chr1:65156134-65156153 None:intergenic 30.0%
!! TCTCTTTTCAAGATGATGAA+TGG - Chr1:65151893-65151912 MsG0180003607.01.T01:three_prime_UTR 30.0%
!! TTTTTAATTGATAGGGGGAA+GGG - Chr1:65155601-65155620 MsG0180003607.01.T01:CDS 30.0%
!!! AATTGGACTGGTGAATTTTT+TGG - Chr1:65153934-65153953 MsG0180003607.01.T01:CDS 30.0%
!!! ACTGGAAGTGTATTTTTAGT+AGG - Chr1:65159358-65159377 MsG0180003607.01.T01:intron 30.0%
!!! AGAGCTTTTTTTTCTTATGC+AGG - Chr1:65158500-65158519 MsG0180003607.01.T01:intron 30.0%
!!! CGGTGGTTCTTTTTTTATAA+CGG + Chr1:65153388-65153407 None:intergenic 30.0%
!!! GAAGGCAAGTTTTAAACATT+TGG - Chr1:65151968-65151987 MsG0180003607.01.T01:three_prime_UTR 30.0%
!!! GTTTTGACTTTAACTATTGG+TGG + Chr1:65154979-65154998 None:intergenic 30.0%
!!! TTTTTTAATTGATAGGGGGA+AGG - Chr1:65155600-65155619 MsG0180003607.01.T01:CDS 30.0%
AAAACTAATACTCGAGTCGT+TGG - Chr1:65151856-65151875 MsG0180003607.01.T01:three_prime_UTR 35.0%
AAATGAAGACGTGAGAACTA+TGG - Chr1:65159070-65159089 MsG0180003607.01.T01:intron 35.0%
AAATTGAGCTATAGGGCTTA+CGG - Chr1:65154061-65154080 MsG0180003607.01.T01:intron 35.0%
AACGAACTTATACGTGTTGA+TGG - Chr1:65156718-65156737 MsG0180003607.01.T01:intron 35.0%
AAGAAATGGTTTAATGGGGA+GGG + Chr1:65157644-65157663 None:intergenic 35.0%
AAGAACAGCATAAGTTGCAT+GGG + Chr1:65158254-65158273 None:intergenic 35.0%
AAGATGATGAATGGTGTGAT+TGG - Chr1:65151902-65151921 MsG0180003607.01.T01:three_prime_UTR 35.0%
AAGCTTGTAGAACAAGAAGA+TGG - Chr1:65159014-65159033 MsG0180003607.01.T01:intron 35.0%
AATAATTGTGGTTTCGTGTG+CGG + Chr1:65158150-65158169 None:intergenic 35.0%
AGATGAAGATTCCAAAAGCT+AGG - Chr1:65154430-65154449 MsG0180003607.01.T01:intron 35.0%
AGCTTGTAGAACAAGAAGAT+GGG - Chr1:65159015-65159034 MsG0180003607.01.T01:intron 35.0%
ATAAGTTCGTTAGCAGCTTT+AGG + Chr1:65156709-65156728 None:intergenic 35.0%
ATAGCAAGAACTGAACTAAC+AGG + Chr1:65154572-65154591 None:intergenic 35.0%
ATATAACAAAGGTAAGTCCG+GGG + Chr1:65156790-65156809 None:intergenic 35.0%
ATCAAAGTACAACTCCTCAT+TGG + Chr1:65157478-65157497 None:intergenic 35.0%
ATCAGTGATGAACCAAAGTT+AGG + Chr1:65157289-65157308 None:intergenic 35.0%
ATCCTAGTTTACTAGGGTTA+TGG - Chr1:65151941-65151960 MsG0180003607.01.T01:three_prime_UTR 35.0%
ATCTACCCATTGATACATGA+AGG - Chr1:65152317-65152336 MsG0180003607.01.T01:CDS 35.0%
ATGAAGATTCCAAAAGCTAG+GGG - Chr1:65154432-65154451 MsG0180003607.01.T01:intron 35.0%
ATGGGTAGATTATGACTTCT+AGG + Chr1:65152307-65152326 None:intergenic 35.0%
ATTGACATAATATCCCCGAA+AGG - Chr1:65157887-65157906 MsG0180003607.01.T01:intron 35.0%
ATTTCCCCTTCATGTATCAA+TGG + Chr1:65152326-65152345 None:intergenic 35.0%
CAAGTTAGTCAAATCCTAAC+AGG - Chr1:65154280-65154299 MsG0180003607.01.T01:intron 35.0%
CATCAATCTTAGTGCCTAAT+TGG + Chr1:65155422-65155441 None:intergenic 35.0%
CATCACTGATATAGGGTTTA+GGG - Chr1:65157299-65157318 MsG0180003607.01.T01:intron 35.0%
CTAATAGATTTGGCAGAAGT+AGG - Chr1:65157146-65157165 MsG0180003607.01.T01:intron 35.0%
CTACCCATTGATATATGAAG+GGG - Chr1:65152408-65152427 MsG0180003607.01.T01:intron 35.0%
CTAGGATTTATACACGACTT+AGG + Chr1:65151928-65151947 None:intergenic 35.0%
CTAGTTCAGTGTCTTTCATT+TGG - Chr1:65155730-65155749 MsG0180003607.01.T01:intron 35.0%
CTTCTTGTTCTACAAGCTTT+GGG + Chr1:65159013-65159032 None:intergenic 35.0%
GAACGGTTTATGTTGATGTT+CGG - Chr1:65154764-65154783 MsG0180003607.01.T01:intron 35.0%
GAAGAAGTTAGTGTAGTTTG+TGG - Chr1:65157108-65157127 MsG0180003607.01.T01:intron 35.0%
GAAGAATTTGATTGAAGGGT+GGG - Chr1:65154845-65154864 MsG0180003607.01.T01:intron 35.0%
GAGCTTAAAATCAGAAGTGA+TGG - Chr1:65157783-65157802 MsG0180003607.01.T01:intron 35.0%
GATATAACAAAGGTAAGTCC+GGG + Chr1:65156791-65156810 None:intergenic 35.0%
GATGAAGATTCCAAAAGCTA+GGG - Chr1:65154431-65154450 MsG0180003607.01.T01:intron 35.0%
GATTAAAGAGACTAGCATTG+TGG - Chr1:65152922-65152941 MsG0180003607.01.T01:intron 35.0%
GCAATTGATATATTCTAGCG+AGG - Chr1:65158572-65158591 MsG0180003607.01.T01:intron 35.0%
GCTTTCCAAGATAGCTTATA+TGG + Chr1:65154161-65154180 None:intergenic 35.0%
GGATATAACAAAGGTAAGTC+CGG + Chr1:65156792-65156811 None:intergenic 35.0%
GGCTGAATATTCTTCATCAA+AGG - Chr1:65159249-65159268 MsG0180003607.01.T01:intron 35.0%
GGTAATAAGCTCCACATTAT+TGG + Chr1:65153342-65153361 None:intergenic 35.0%
GGTCAATAGAATCTGTATTC+GGG - Chr1:65159270-65159289 MsG0180003607.01.T01:intron 35.0%
GGTTTAGATCTCAAAGAATG+TGG + Chr1:65158930-65158949 None:intergenic 35.0%
GTAAACGCCTTAATTCTTGA+AGG + Chr1:65155651-65155670 None:intergenic 35.0%
GTCTTACAAATATTGCTGCA+GGG - Chr1:65155897-65155916 MsG0180003607.01.T01:intron 35.0%
GTGAAACTGAAATCTTTCCA+TGG + Chr1:65159048-65159067 None:intergenic 35.0%
TAAACTTCGCAAAACCTACA+GGG + Chr1:65158209-65158228 None:intergenic 35.0%
TAAGAAATGGTTTAATGGGG+AGG + Chr1:65157645-65157664 None:intergenic 35.0%
TCAGCCAACATGATGTTATT+GGG + Chr1:65153117-65153136 None:intergenic 35.0%
TCATCACTGATATAGGGTTT+AGG - Chr1:65157298-65157317 MsG0180003607.01.T01:intron 35.0%
TCCTAGTTTACTAGGGTTAT+GGG - Chr1:65151942-65151961 MsG0180003607.01.T01:three_prime_UTR 35.0%
TCTACCCATTGATACATGAA+GGG - Chr1:65152318-65152337 MsG0180003607.01.T01:CDS 35.0%
TCTTCTTGTTCTACAAGCTT+TGG + Chr1:65159014-65159033 None:intergenic 35.0%
TCTTGCCATTAATGATTCCA+AGG + Chr1:65155811-65155830 None:intergenic 35.0%
TCTTTGTTCATCGTAAACAG+GGG + Chr1:65155168-65155187 None:intergenic 35.0%
TGAAAGACACTGAACTAGTA+TGG + Chr1:65155728-65155747 None:intergenic 35.0%
TGAAAGGGTTATCTAAATCG+TGG - Chr1:65152017-65152036 MsG0180003607.01.T01:three_prime_UTR 35.0%
TGAAGAATTTGATTGAAGGG+TGG - Chr1:65154844-65154863 MsG0180003607.01.T01:intron 35.0%
TGTCTTACAAATATTGCTGC+AGG - Chr1:65155896-65155915 MsG0180003607.01.T01:intron 35.0%
TTCAGCCAACATGATGTTAT+TGG + Chr1:65153118-65153137 None:intergenic 35.0%
TTCGGGGATATTATGTCAAT+TGG + Chr1:65157887-65157906 None:intergenic 35.0%
TTGAAGACGATTCCAAAGTT+TGG - Chr1:65157426-65157445 MsG0180003607.01.T01:intron 35.0%
TTTCCCCTTCATGTATCAAT+GGG + Chr1:65152325-65152344 None:intergenic 35.0%
! AATGAAGGGTACATGGAAAT+TGG + Chr1:65152776-65152795 None:intergenic 35.0%
! ACATTTTATCAGAGCTTGCA+TGG + Chr1:65158404-65158423 None:intergenic 35.0%
! AGTGTTTTCTCTTACCTCTT+TGG - Chr1:65155475-65155494 MsG0180003607.01.T01:intron 35.0%
! ATAAAATTTTCTGCGGCTTG+TGG - Chr1:65159306-65159325 MsG0180003607.01.T01:intron 35.0%
! CTGGTTTCACTTGTTGAAAA+AGG - Chr1:65158726-65158745 MsG0180003607.01.T01:intron 35.0%
! CTTGTGCATTATGGTTTTTG+TGG - Chr1:65156616-65156635 MsG0180003607.01.T01:intron 35.0%
! CTTTGGTTCATCACTGATAT+AGG - Chr1:65157291-65157310 MsG0180003607.01.T01:intron 35.0%
! GAAAAAAGGTGCAATAGCAA+AGG + Chr1:65158603-65158622 None:intergenic 35.0%
! GGCTTTGTCTAATCTAATCA+AGG - Chr1:65156423-65156442 MsG0180003607.01.T01:intron 35.0%
! GGTTGATTTCTTTGGCAAAT+TGG - Chr1:65152185-65152204 MsG0180003607.01.T01:three_prime_UTR 35.0%
! GGTTTAGAATGGCTTCAAAT+TGG - Chr1:65153917-65153936 MsG0180003607.01.T01:CDS 35.0%
! GTCAGTTTGGTTGATTTCTT+TGG - Chr1:65152177-65152196 MsG0180003607.01.T01:three_prime_UTR 35.0%
! TATACGTGTTGATGGAGTAT+TGG - Chr1:65156726-65156745 MsG0180003607.01.T01:intron 35.0%
! TATGTACTCATCAGCTTTTG+TGG - Chr1:65156590-65156609 MsG0180003607.01.T01:intron 35.0%
! TGCTGACTAGGATATAACAA+AGG + Chr1:65156801-65156820 None:intergenic 35.0%
! TGTAGTTTGTGGTTGTTGAT+TGG - Chr1:65157119-65157138 MsG0180003607.01.T01:intron 35.0%
! TTATGTCAATTGGTAACAGC+TGG + Chr1:65157877-65157896 None:intergenic 35.0%
! TTGAAGATTTTCTCAGTCTG+TGG + Chr1:65155522-65155541 None:intergenic 35.0%
! TTGGTAACAGCTGGATAAAT+CGG + Chr1:65157868-65157887 None:intergenic 35.0%
! TTTAATAGGGTCCCTTTTGT+TGG + Chr1:65153479-65153498 None:intergenic 35.0%
!! AAGTATTTTGGAGAGGACTA+TGG - Chr1:65159110-65159129 MsG0180003607.01.T01:intron 35.0%
!! AGACTGTTCTAGAGAACTTA+TGG + Chr1:65154232-65154251 None:intergenic 35.0%
!! AGAGCTATTAAGGCTCTAAA+GGG - Chr1:65157522-65157541 MsG0180003607.01.T01:CDS 35.0%
!! AGTATTTTGGAGAGGACTAT+GGG - Chr1:65159111-65159130 MsG0180003607.01.T01:intron 35.0%
!! AGTTGACAAGTATTTTGGAG+AGG - Chr1:65159103-65159122 MsG0180003607.01.T01:intron 35.0%
!! CATGTTGCTTTATTGTGCAT+GGG - Chr1:65156877-65156896 MsG0180003607.01.T01:intron 35.0%
!! GTATGTCTAGTTTGTTTGAC+GGG - Chr1:65155046-65155065 MsG0180003607.01.T01:CDS 35.0%
!! TATGTCTAGTTTGTTTGACG+GGG - Chr1:65155047-65155066 MsG0180003607.01.T01:CDS 35.0%
!! TCATGTTGCTTTATTGTGCA+TGG - Chr1:65156876-65156895 MsG0180003607.01.T01:intron 35.0%
!! TCTGAATCTTCTGGTTTAGA+GGG - Chr1:65155351-65155370 MsG0180003607.01.T01:intron 35.0%
!! TGGATAGTTGGGATTTGTTT+TGG - Chr1:65157202-65157221 MsG0180003607.01.T01:intron 35.0%
!! TTACCTCTTTGGTAATGTGT+CGG - Chr1:65155486-65155505 MsG0180003607.01.T01:intron 35.0%
!! TTCTGAATCTTCTGGTTTAG+AGG - Chr1:65155350-65155369 MsG0180003607.01.T01:intron 35.0%
!! TTTGTTTTCAGTTGCGAATG+CGG - Chr1:65153621-65153640 MsG0180003607.01.T01:intron 35.0%
!!! ATAGTTGGGATTTGTTTTGG+TGG - Chr1:65157205-65157224 MsG0180003607.01.T01:intron 35.0%
!!! CTTGCCAGGTTTTATTGATT+TGG - Chr1:65158752-65158771 MsG0180003607.01.T01:intron 35.0%
!!! TAGTTGGGATTTGTTTTGGT+GGG - Chr1:65157206-65157225 MsG0180003607.01.T01:intron 35.0%
!!! TGCTCGACATCTTATTTTCA+TGG + Chr1:65152153-65152172 None:intergenic 35.0%
AAAAGACACATAGGCCTGTT+AGG + Chr1:65154297-65154316 None:intergenic 40.0%
AAATTTAGCTACCACCATGC+TGG - Chr1:65158010-65158029 MsG0180003607.01.T01:intron 40.0%
AAGACGATTCCAAAGTTTGG+CGG - Chr1:65157429-65157448 MsG0180003607.01.T01:intron 40.0%
AAGTTAGGAAGGACAAACAC+AGG + Chr1:65157274-65157293 None:intergenic 40.0%
AATAATCAGGGTAGCCTTTC+GGG + Chr1:65157904-65157923 None:intergenic 40.0%
AATCAGCTACTGAAGTAGCA+TGG - Chr1:65157961-65157980 MsG0180003607.01.T01:intron 40.0%
AATCTGTATTCGGGATTGAG+AGG - Chr1:65159279-65159298 MsG0180003607.01.T01:intron 40.0%
AATGTCTGGATAGTGAACAC+AGG - Chr1:65158419-65158438 MsG0180003607.01.T01:intron 40.0%
ACCAGAAGATTCAGAACACT+TGG + Chr1:65155346-65155365 None:intergenic 40.0%
ACCATCCATATGCAAAATGG+CGG - Chr1:65157579-65157598 MsG0180003607.01.T01:CDS 40.0%
ACCCATAACCCTAGTAAACT+AGG + Chr1:65151946-65151965 None:intergenic 40.0%
ACGTTCAACTGTTAGAACAG+CGG - Chr1:65156396-65156415 MsG0180003607.01.T01:intron 40.0%
ACTGCCCAATAACATCATGT+TGG - Chr1:65153110-65153129 MsG0180003607.01.T01:CDS 40.0%
ACTTATGCTGTTCTTGTACC+TGG - Chr1:65158259-65158278 MsG0180003607.01.T01:intron 40.0%
AGAATGGCTTCAAATTGGAC+TGG - Chr1:65153922-65153941 MsG0180003607.01.T01:CDS 40.0%
AGCATTGTGGTGAAGTAAGA+AGG - Chr1:65152935-65152954 MsG0180003607.01.T01:intron 40.0%
AGGCTATTGATATTCCTCTC+AGG + Chr1:65157254-65157273 None:intergenic 40.0%
AGGGACCCTATTAAATCATC+AGG - Chr1:65153484-65153503 MsG0180003607.01.T01:intron 40.0%
AGTAGGCTATAAAGAGAGAG+TGG - Chr1:65157163-65157182 MsG0180003607.01.T01:intron 40.0%
AGTTTAGGTAATCTCGTTGC+TGG - Chr1:65158223-65158242 MsG0180003607.01.T01:intron 40.0%
ATAATTGCTGGTGATAGGGT+TGG - Chr1:65154019-65154038 MsG0180003607.01.T01:intron 40.0%
ATATTGAAGCTGCCAAGCTA+GGG - Chr1:65158787-65158806 MsG0180003607.01.T01:intron 40.0%
ATCAGCTACTGAAGTAGCAT+GGG - Chr1:65157962-65157981 MsG0180003607.01.T01:intron 40.0%
ATGTCTGGATAGTGAACACA+GGG - Chr1:65158420-65158439 MsG0180003607.01.T01:intron 40.0%
ATTGTTAGGAAAGCCCAAAC+AGG - Chr1:65157064-65157083 MsG0180003607.01.T01:intron 40.0%
ATTTGCGTTGCTCCAACTAA+AGG - Chr1:65158672-65158691 MsG0180003607.01.T01:intron 40.0%
CAAGAACAGCATAAGTTGCA+TGG + Chr1:65158255-65158274 None:intergenic 40.0%
CAATAATCAGGGTAGCCTTT+CGG + Chr1:65157905-65157924 None:intergenic 40.0%
CATCTAAGGAAAGAATGGGA+TGG - Chr1:65156085-65156104 MsG0180003607.01.T01:intron 40.0%
CCATGTACCCTTCATTGTAA+TGG - Chr1:65152780-65152799 MsG0180003607.01.T01:CDS 40.0%
CGTTTCACCTTCTTCTTCAA+TGG - Chr1:65153444-65153463 MsG0180003607.01.T01:intron 40.0%
CTAAACTTCGCAAAACCTAC+AGG + Chr1:65158210-65158229 None:intergenic 40.0%
CTAACAGTTGAACGTCTGTA+TGG + Chr1:65156391-65156410 None:intergenic 40.0%
CTACCCATTGATACATGAAG+GGG - Chr1:65152319-65152338 MsG0180003607.01.T01:CDS 40.0%
CTAGAAGATATAGAGAGCGA+GGG - Chr1:65159457-65159476 MsG0180003607.01.T01:CDS 40.0%
CTAGTATTAGAGCTGGATGT+TGG - Chr1:65157387-65157406 MsG0180003607.01.T01:intron 40.0%
CTTATATTCGGGTGTTCTGT+TGG + Chr1:65157502-65157521 None:intergenic 40.0%
CTTTCTTATATCAAACGGGG+CGG + Chr1:65158628-65158647 None:intergenic 40.0%
CTTTGCTTATTGCTCACCTT+GGG - Chr1:65155957-65155976 MsG0180003607.01.T01:intron 40.0%
GAAATTGGCAAAGCATGTCT+TGG + Chr1:65152761-65152780 None:intergenic 40.0%
GACAACTTGCAGTTACAGTT+GGG - Chr1:65153659-65153678 MsG0180003607.01.T01:intron 40.0%
GACACCATCCATATGCAAAA+TGG - Chr1:65157576-65157595 MsG0180003607.01.T01:CDS 40.0%
GATTAGATTAGACAAAGCCC+AGG + Chr1:65156422-65156441 None:intergenic 40.0%
GCAAAACGACTTTGTAGAGT+TGG - Chr1:65153709-65153728 MsG0180003607.01.T01:intron 40.0%
GGTTATCTAAATCGTGGACA+TGG - Chr1:65152023-65152042 MsG0180003607.01.T01:three_prime_UTR 40.0%
GTACATGAAAATGGGATCCA+CGG + Chr1:65153366-65153385 None:intergenic 40.0%
GTAGGCTATAAAGAGAGAGT+GGG - Chr1:65157164-65157183 MsG0180003607.01.T01:intron 40.0%
GTGAAACGAATGCAAGTGTT+TGG + Chr1:65153432-65153451 None:intergenic 40.0%
GTGATGAACCAAAGTTAGGA+AGG + Chr1:65157285-65157304 None:intergenic 40.0%
GTGTTTGTCCTTCCTAACTT+TGG - Chr1:65157274-65157293 MsG0180003607.01.T01:intron 40.0%
TAAATCGTGGACATGGATGA+AGG - Chr1:65152030-65152049 MsG0180003607.01.T01:three_prime_UTR 40.0%
TAACAATGGGAAATCCCTGT+AGG - Chr1:65158192-65158211 MsG0180003607.01.T01:intron 40.0%
TAAGGAAAGAATGGGATGGA+GGG - Chr1:65156089-65156108 MsG0180003607.01.T01:intron 40.0%
TACAGTTGGGAAAGAGAGAA+GGG - Chr1:65153672-65153691 MsG0180003607.01.T01:intron 40.0%
TACTAGGGTTATGGGTAAGA+AGG - Chr1:65151950-65151969 MsG0180003607.01.T01:three_prime_UTR 40.0%
TATAAACTGAAGCCCTAGCT+TGG + Chr1:65158802-65158821 None:intergenic 40.0%
TCTTCTTTGCTTGTACTGTG+TGG - Chr1:65156546-65156565 MsG0180003607.01.T01:intron 40.0%
TGGCAAATTGGTACTCAAGT+AGG - Chr1:65152197-65152216 MsG0180003607.01.T01:exon 40.0%
TTACAGTTGGGAAAGAGAGA+AGG - Chr1:65153671-65153690 MsG0180003607.01.T01:intron 40.0%
TTGTGGTCTCTTGTGCATTA+TGG - Chr1:65156607-65156626 MsG0180003607.01.T01:intron 40.0%
TTTGCTTATTGCTCACCTTG+GGG - Chr1:65155958-65155977 MsG0180003607.01.T01:intron 40.0%
! AAATTGTTTTCTTGTGGGGG+AGG - Chr1:65155105-65155124 MsG0180003607.01.T01:intron 40.0%
! AACAGTGAAACATGCTGACT+AGG + Chr1:65156813-65156832 None:intergenic 40.0%
! AATTGTTTTCTTGTGGGGGA+GGG - Chr1:65155106-65155125 MsG0180003607.01.T01:intron 40.0%
! ACCAAGTGTTCTGAATCTTC+TGG - Chr1:65155342-65155361 MsG0180003607.01.T01:intron 40.0%
! CAAATAGTTGTGTTGGTCTG+AGG - Chr1:65155308-65155327 MsG0180003607.01.T01:intron 40.0%
! CCATTACAATGAAGGGTACA+TGG + Chr1:65152783-65152802 None:intergenic 40.0%
! CTGTAGGTTTTGCGAAGTTT+AGG - Chr1:65158208-65158227 MsG0180003607.01.T01:intron 40.0%
! GAGAGCTATTAAGGCTCTAA+AGG - Chr1:65157521-65157540 MsG0180003607.01.T01:CDS 40.0%
! GCAAGCTCTGATAAAATGTC+TGG - Chr1:65158405-65158424 MsG0180003607.01.T01:intron 40.0%
! GCTCTAGGTTTATGCTTTCT+TGG - Chr1:65153567-65153586 MsG0180003607.01.T01:intron 40.0%
! TTATTGGTTGCTGACCAATG+AGG - Chr1:65157461-65157480 MsG0180003607.01.T01:intron 40.0%
! TTTGGAGTCTCAGACTTCAT+TGG - Chr1:65153798-65153817 MsG0180003607.01.T01:CDS 40.0%
!! AGCAAAGCTTTTGTTTCCTC+TGG + Chr1:65155926-65155945 None:intergenic 40.0%
!! ATTTGGTTCTCCAGATGAAC+AGG - Chr1:65155747-65155766 MsG0180003607.01.T01:intron 40.0%
!! CATTCTTGCAAGAGGTACTA+AGG + Chr1:65156362-65156381 None:intergenic 40.0%
!! CTGAATCTTCTGGTTTAGAG+GGG - Chr1:65155352-65155371 MsG0180003607.01.T01:intron 40.0%
!! GACGCTGAAAAAGGTTTTAG+CGG + Chr1:65153408-65153427 None:intergenic 40.0%
!! TCATTGGTCTTGTGATAGAC+TGG - Chr1:65159340-65159359 MsG0180003607.01.T01:intron 40.0%
!! TCGTTAGCAGCTTTAGGATT+TGG + Chr1:65156703-65156722 None:intergenic 40.0%
!! TGAATCTTCTGGTTTAGAGG+GGG - Chr1:65155353-65155372 MsG0180003607.01.T01:intron 40.0%
AAAACCCAGCCAAACCTGTT+TGG + Chr1:65157081-65157100 None:intergenic 45.0%
AAACCCAGCCAAACCTGTTT+GGG + Chr1:65157080-65157099 None:intergenic 45.0%
AAGTGCTTCCATTCAGCGTT+TGG - Chr1:65157545-65157564 MsG0180003607.01.T01:CDS 45.0%
AGAAGATGGGATTGAAGCCA+TGG - Chr1:65159028-65159047 MsG0180003607.01.T01:intron 45.0%
AGACTAGTGCTAGCCAATGA+AGG - Chr1:65155193-65155212 MsG0180003607.01.T01:intron 45.0%
AGAGAGAGTGGGAGAAGATT+CGG - Chr1:65157175-65157194 MsG0180003607.01.T01:intron 45.0%
AGATGCTCCAGGATCAGATT+TGG + Chr1:65158708-65158727 None:intergenic 45.0%
AGATTCGGAGTCTGGATAGT+TGG - Chr1:65157190-65157209 MsG0180003607.01.T01:intron 45.0%
AGCTATATTAGACAGCACCC+AGG + Chr1:65158532-65158551 None:intergenic 45.0%
AGGGCTTCAGTTTATAGAGC+TGG - Chr1:65158806-65158825 MsG0180003607.01.T01:intron 45.0%
AGTGCTTCCATTCAGCGTTT+GGG - Chr1:65157546-65157565 MsG0180003607.01.T01:CDS 45.0%
ATAATCAGGGTAGCCTTTCG+GGG + Chr1:65157903-65157922 None:intergenic 45.0%
ATGCCGACACATTACCAAAG+AGG + Chr1:65155492-65155511 None:intergenic 45.0%
ATGGGCTTGATGAGTAGTAG+CGG - Chr1:65159129-65159148 MsG0180003607.01.T01:intron 45.0%
ATTTCCACCCAAACGCTGAA+TGG + Chr1:65157556-65157575 None:intergenic 45.0%
CACTGATATAGGGTTTAGGG+AGG - Chr1:65157302-65157321 MsG0180003607.01.T01:intron 45.0%
CCAAGGTGAGCAATAAGCAA+AGG + Chr1:65155959-65155978 None:intergenic 45.0%
CCATCCATATGCAAAATGGC+GGG - Chr1:65157580-65157599 MsG0180003607.01.T01:CDS 45.0%
CCTAGAAGATATAGAGAGCG+AGG - Chr1:65159456-65159475 MsG0180003607.01.T01:CDS 45.0%
CCTCGCTCTCTATATCTTCT+AGG + Chr1:65159459-65159478 None:intergenic 45.0%
CCTTTGCTTATTGCTCACCT+TGG - Chr1:65155956-65155975 MsG0180003607.01.T01:intron 45.0%
CGACAACTTGCAGTTACAGT+TGG - Chr1:65153658-65153677 MsG0180003607.01.T01:intron 45.0%
CGAGATACCAAATCTGATCC+TGG - Chr1:65158698-65158717 MsG0180003607.01.T01:intron 45.0%
CGCCCCGTTTGATATAAGAA+AGG - Chr1:65158626-65158645 MsG0180003607.01.T01:intron 45.0%
CGGTTTATGTTGATGTTCGG+AGG - Chr1:65154767-65154786 MsG0180003607.01.T01:intron 45.0%
CTAAGGAAAGAATGGGATGG+AGG - Chr1:65156088-65156107 MsG0180003607.01.T01:intron 45.0%
CTACATACGACATGGAGTTG+AGG + Chr1:65159206-65159225 None:intergenic 45.0%
CTGGTGAAGATGAAGAGTTG+AGG - Chr1:65156314-65156333 MsG0180003607.01.T01:intron 45.0%
GAAAGAGAGAAGGGAATCGT+TGG - Chr1:65153681-65153700 MsG0180003607.01.T01:intron 45.0%
GATATTGAAGCTGCCAAGCT+AGG - Chr1:65158786-65158805 MsG0180003607.01.T01:intron 45.0%
GATTCGGAGTCTGGATAGTT+GGG - Chr1:65157191-65157210 MsG0180003607.01.T01:intron 45.0%
GCAATAAGCAAAGGCAATGC+AGG + Chr1:65155950-65155969 None:intergenic 45.0%
GCATGCAGGATTGTCCAATT+AGG - Chr1:65155405-65155424 MsG0180003607.01.T01:CDS 45.0%
GCTTTAACAGCAGACTCAAC+AGG + Chr1:65155694-65155713 None:intergenic 45.0%
GGTAGCATCATTCTTGCAAG+AGG + Chr1:65156370-65156389 None:intergenic 45.0%
GTACCTGGACTTGAAGTTAC+AGG - Chr1:65158274-65158293 MsG0180003607.01.T01:intron 45.0%
GTGCTGTCTAATATAGCTGC+TGG - Chr1:65158534-65158553 MsG0180003607.01.T01:intron 45.0%
GTGTTTGGAGACGCTGAAAA+AGG + Chr1:65153417-65153436 None:intergenic 45.0%
GTTGAAAAAGGATGCTTGCC+AGG - Chr1:65158738-65158757 MsG0180003607.01.T01:intron 45.0%
GTTGAGTCTGCTGTTAAAGC+TGG - Chr1:65155694-65155713 MsG0180003607.01.T01:CDS 45.0%
TAGAGCTGGATGTTGGATTG+TGG - Chr1:65157394-65157413 MsG0180003607.01.T01:intron 45.0%
TAGCCTGTAACTTCAAGTCC+AGG + Chr1:65158280-65158299 None:intergenic 45.0%
TAGGAAAGCCCAAACAGGTT+TGG - Chr1:65157069-65157088 MsG0180003607.01.T01:intron 45.0%
TAGGCGCCCTTCAAGAATTA+AGG - Chr1:65155641-65155660 MsG0180003607.01.T01:CDS 45.0%
TATATCTTCTAGGTCGCAGC+TGG + Chr1:65159449-65159468 None:intergenic 45.0%
TATGTTGATGTTCGGAGGAG+AGG - Chr1:65154772-65154791 MsG0180003607.01.T01:intron 45.0%
TGAACACAGGGTCTTGAAGA+AGG - Chr1:65158432-65158451 MsG0180003607.01.T01:intron 45.0%
TGCGTTTAGACCTGTTCATC+TGG + Chr1:65155760-65155779 None:intergenic 45.0%
TTAACAGCAGACTCAACAGG+AGG + Chr1:65155691-65155710 None:intergenic 45.0%
TTGATTGTGAGGGAATGCTC+CGG - Chr1:65154659-65154678 MsG0180003607.01.T01:intron 45.0%
TTGCTTATTGCTCACCTTGG+GGG - Chr1:65155959-65155978 MsG0180003607.01.T01:intron 45.0%
! AAATCTGATCCTGGAGCATC+TGG - Chr1:65158707-65158726 MsG0180003607.01.T01:intron 45.0%
! AGAGAAGGGAATCGTTGGTT+CGG - Chr1:65153686-65153705 MsG0180003607.01.T01:intron 45.0%
! ATTGTTTTCTTGTGGGGGAG+GGG - Chr1:65155107-65155126 MsG0180003607.01.T01:intron 45.0%
! GTGAAGTAAGAAGGTGTGAC+AGG - Chr1:65152944-65152963 MsG0180003607.01.T01:intron 45.0%
! TAGCTGATTCATCATCCCTG+AGG + Chr1:65157950-65157969 None:intergenic 45.0%
! TGTCGAGCAAAGTGTCAGTT+TGG - Chr1:65152164-65152183 MsG0180003607.01.T01:three_prime_UTR 45.0%
!! GCTGAAAAAGGTTTTAGCGG+TGG + Chr1:65153405-65153424 None:intergenic 45.0%
!!! TATATATTTTTTAATTGATA+GGG - Chr1:65155594-65155613 MsG0180003607.01.T01:CDS 5.0%
AAAGCCCAAACAGGTTTGGC+TGG - Chr1:65157073-65157092 MsG0180003607.01.T01:intron 50.0%
AAAGTGATCACTCACCCCCA+AGG + Chr1:65155976-65155995 None:intergenic 50.0%
AACTGTTAGAACAGCGGCCT+GGG - Chr1:65156402-65156421 MsG0180003607.01.T01:intron 50.0%
AAGCAGCTTCAAGCAACTGC+AGG + Chr1:65155874-65155893 None:intergenic 50.0%
AAGCCCAAACAGGTTTGGCT+GGG - Chr1:65157074-65157093 MsG0180003607.01.T01:intron 50.0%
AATTGTGGTTTCGTGTGCGG+TGG + Chr1:65158147-65158166 None:intergenic 50.0%
ACGACATGGAGTTGAGGCAA+GGG + Chr1:65159200-65159219 None:intergenic 50.0%
AGAGGGATGCCCAATGGAAA+GGG - Chr1:65158987-65159006 MsG0180003607.01.T01:intron 50.0%
AGATGCGGGGCTACTACATT+GGG + Chr1:65155144-65155163 None:intergenic 50.0%
AGCTAGGGGCCAATCCAAAT+TGG - Chr1:65154446-65154465 MsG0180003607.01.T01:intron 50.0%
ATCGTAAACAGGGGCAGATG+CGG + Chr1:65155159-65155178 None:intergenic 50.0%
CAAGTGAAACCAGATGCTCC+AGG + Chr1:65158719-65158738 None:intergenic 50.0%
CATGAAAATGGGATCCACGG+CGG + Chr1:65153363-65153382 None:intergenic 50.0%
GGATCGGCCATTGAAGAAGA+AGG + Chr1:65153454-65153473 None:intergenic 50.0%
GGTATCTCGTCGCCTTTAGT+TGG + Chr1:65158687-65158706 None:intergenic 50.0%
GGTGCAGTGCAGAAAAGAGT+AGG - Chr1:65155622-65155641 MsG0180003607.01.T01:CDS 50.0%
TACGACATGGAGTTGAGGCA+AGG + Chr1:65159201-65159220 None:intergenic 50.0%
TACGTCACTCTTCACCAGCA+TGG + Chr1:65158027-65158046 None:intergenic 50.0%
TATTGCTGCAGGGAATCCAG+AGG - Chr1:65155907-65155926 MsG0180003607.01.T01:intron 50.0%
TCCAAAGTTTGGCGGAGAGA+AGG - Chr1:65157437-65157456 MsG0180003607.01.T01:intron 50.0%
TCTTATGCAGGAAGCAGCCT+GGG - Chr1:65158512-65158531 MsG0180003607.01.T01:intron 50.0%
TGCAGTTGCTTGAAGCTGCT+TGG - Chr1:65155873-65155892 MsG0180003607.01.T01:intron 50.0%
TGTGTCTGTAGGTCCTGAGA+GGG - Chr1:65158970-65158989 MsG0180003607.01.T01:intron 50.0%
TGTTGCTGAGCAGTGTGCTT+GGG - Chr1:65156276-65156295 MsG0180003607.01.T01:intron 50.0%
TTCTTATGCAGGAAGCAGCC+TGG - Chr1:65158511-65158530 MsG0180003607.01.T01:intron 50.0%
TTGGCGGAGAGAAGGCTTAT+TGG - Chr1:65157445-65157464 MsG0180003607.01.T01:intron 50.0%
TTGTGTCTGTAGGTCCTGAG+AGG - Chr1:65158969-65158988 MsG0180003607.01.T01:intron 50.0%
! ATAGGGTCCCTTTTGTTGGC+AGG + Chr1:65153475-65153494 None:intergenic 50.0%
! CGAAAGCGTGAGTATTTCCC+CGG - Chr1:65156770-65156789 MsG0180003607.01.T01:intron 50.0%
! GGAGCTCTTTTCTGCAGAAC+AGG + Chr1:65156251-65156270 None:intergenic 50.0%
! GTCCCTTTTGTTGGCAGGAT+CGG + Chr1:65153470-65153489 None:intergenic 50.0%
! GTTTTCAGTTGCGAATGCGG+CGG - Chr1:65153624-65153643 MsG0180003607.01.T01:intron 50.0%
! TTTTCAGTTGCGAATGCGGC+GGG - Chr1:65153625-65153644 MsG0180003607.01.T01:intron 50.0%
!! AAGCTTTGGGCCCTTTCCAT+TGG + Chr1:65159000-65159019 None:intergenic 50.0%
!! ACGTCCCGCCATTTTGCATA+TGG + Chr1:65157587-65157606 None:intergenic 50.0%
!! AGCTTTGGGCCCTTTCCATT+GGG + Chr1:65158999-65159018 None:intergenic 50.0%
!! CCCGCCATTTTGCATATGGA+TGG + Chr1:65157583-65157602 None:intergenic 50.0%
!! GAGAAGGGAATCGTTGGTTC+GGG - Chr1:65153687-65153706 MsG0180003607.01.T01:intron 50.0%
!!! GGGATTTGTTTTGGTGGGAG+AGG - Chr1:65157211-65157230 MsG0180003607.01.T01:intron 50.0%
!!! TTGGATTGGCCCCTAGCTTT+TGG + Chr1:65154444-65154463 None:intergenic 50.0%
ACACTGCTCAGCAACAGGTG+AGG + Chr1:65156272-65156291 None:intergenic 55.0%
ATGCGGGGCTACTACATTGG+GGG + Chr1:65155142-65155161 None:intergenic 55.0%
CAAACGGGGCGGCAGAAAAA+AGG + Chr1:65158617-65158636 None:intergenic 55.0%
CAACTGTTAGAACAGCGGCC+TGG - Chr1:65156401-65156420 MsG0180003607.01.T01:intron 55.0%
CAAGCACACTGCTCAGCAAC+AGG + Chr1:65156277-65156296 None:intergenic 55.0%
CAGATGCGGGGCTACTACAT+TGG + Chr1:65155145-65155164 None:intergenic 55.0%
CAGGCTCTCGAAATCCTGAG+AGG - Chr1:65157237-65157256 MsG0180003607.01.T01:intron 55.0%
CTGTTGCTGAGCAGTGTGCT+TGG - Chr1:65156275-65156294 MsG0180003607.01.T01:intron 55.0%
GAGAGGGATGCCCAATGGAA+AGG - Chr1:65158986-65159005 MsG0180003607.01.T01:intron 55.0%
GATGCGGGGCTACTACATTG+GGG + Chr1:65155143-65155162 None:intergenic 55.0%
GCCTTCTCTCCGCCAAACTT+TGG + Chr1:65157441-65157460 None:intergenic 55.0%
GCTTCCATTCAGCGTTTGGG+TGG - Chr1:65157549-65157568 MsG0180003607.01.T01:CDS 55.0%
GGCCGATCCTGCCAACAAAA+GGG - Chr1:65153465-65153484 MsG0180003607.01.T01:intron 55.0%
GTCACTCTTCACCAGCATGG+TGG + Chr1:65158024-65158043 None:intergenic 55.0%
GTGGGAGAAGATTCGGAGTC+TGG - Chr1:65157182-65157201 MsG0180003607.01.T01:intron 55.0%
TCGTAAACAGGGGCAGATGC+GGG + Chr1:65155158-65155177 None:intergenic 55.0%
TGGCCGATCCTGCCAACAAA+AGG - Chr1:65153464-65153483 MsG0180003607.01.T01:intron 55.0%
TGTGGAGCTTATTACCGCCG+TGG - Chr1:65153346-65153365 MsG0180003607.01.T01:CDS 55.0%
TTCCATTGGGCATCCCTCTC+AGG + Chr1:65158986-65159005 None:intergenic 55.0%
!! GTTTTGGTGGGAGAGGTCTC+AGG - Chr1:65157218-65157237 MsG0180003607.01.T01:intron 55.0%
!! TGCTTGGGCACTGGGAAATG+TGG - Chr1:65156291-65156310 MsG0180003607.01.T01:intron 55.0%
CGTAAACAGGGGCAGATGCG+GGG + Chr1:65155157-65155176 None:intergenic 60.0%
GAGCAGTGTGCTTGGGCACT+GGG - Chr1:65156283-65156302 MsG0180003607.01.T01:intron 60.0%
GTCCTGAGAGGGATGCCCAA+TGG - Chr1:65158981-65159000 MsG0180003607.01.T01:intron 60.0%
TGAGCAGTGTGCTTGGGCAC+TGG - Chr1:65156282-65156301 MsG0180003607.01.T01:intron 60.0%
!! TGGGCACTGGGAAATGTGGC+TGG - Chr1:65156295-65156314 MsG0180003607.01.T01:intron 60.0%
Chromosome Type Strat End Strand Name
Chr1 gene 65151812 65159543 65151812 ID=MsG0180003607.01;Name=MsG0180003607.01
Chr1 mRNA 65151812 65159543 65151812 ID=MsG0180003607.01.T01;Parent=MsG0180003607.01;Name=MsG0180003607.01.T01;_AED=0.36;_eAED=0.43;_QI=0|0.5|0.54|0.90|1|1|11|398|590
Chr1 exon 65151812 65152374 65151812 ID=MsG0180003607.01.T01:exon:4870;Parent=MsG0180003607.01.T01
Chr1 exon 65152528 65152833 65152528 ID=MsG0180003607.01.T01:exon:4869;Parent=MsG0180003607.01.T01
Chr1 exon 65153067 65153141 65153067 ID=MsG0180003607.01.T01:exon:4868;Parent=MsG0180003607.01.T01
Chr1 exon 65153252 65153402 65153252 ID=MsG0180003607.01.T01:exon:4867;Parent=MsG0180003607.01.T01
Chr1 exon 65153751 65153978 65153751 ID=MsG0180003607.01.T01:exon:4866;Parent=MsG0180003607.01.T01
Chr1 exon 65154579 65154658 65154579 ID=MsG0180003607.01.T01:exon:4865;Parent=MsG0180003607.01.T01
Chr1 exon 65154911 65155095 65154911 ID=MsG0180003607.01.T01:exon:4864;Parent=MsG0180003607.01.T01
Chr1 exon 65155375 65155477 65155375 ID=MsG0180003607.01.T01:exon:4863;Parent=MsG0180003607.01.T01
Chr1 exon 65155587 65155740 65155587 ID=MsG0180003607.01.T01:exon:4862;Parent=MsG0180003607.01.T01
Chr1 exon 65157501 65157723 65157501 ID=MsG0180003607.01.T01:exon:4861;Parent=MsG0180003607.01.T01
Chr1 exon 65159441 65159543 65159441 ID=MsG0180003607.01.T01:exon:4860;Parent=MsG0180003607.01.T01
Chr1 CDS 65159441 65159543 65159441 ID=MsG0180003607.01.T01:cds;Parent=MsG0180003607.01.T01
Chr1 CDS 65157501 65157723 65157501 ID=MsG0180003607.01.T01:cds;Parent=MsG0180003607.01.T01
Chr1 CDS 65155587 65155740 65155587 ID=MsG0180003607.01.T01:cds;Parent=MsG0180003607.01.T01
Chr1 CDS 65155375 65155477 65155375 ID=MsG0180003607.01.T01:cds;Parent=MsG0180003607.01.T01
Chr1 CDS 65154911 65155095 65154911 ID=MsG0180003607.01.T01:cds;Parent=MsG0180003607.01.T01
Chr1 CDS 65154579 65154658 65154579 ID=MsG0180003607.01.T01:cds;Parent=MsG0180003607.01.T01
Chr1 CDS 65153751 65153978 65153751 ID=MsG0180003607.01.T01:cds;Parent=MsG0180003607.01.T01
Chr1 CDS 65153252 65153402 65153252 ID=MsG0180003607.01.T01:cds;Parent=MsG0180003607.01.T01
Chr1 CDS 65153067 65153141 65153067 ID=MsG0180003607.01.T01:cds;Parent=MsG0180003607.01.T01
Chr1 CDS 65152528 65152833 65152528 ID=MsG0180003607.01.T01:cds;Parent=MsG0180003607.01.T01
Chr1 CDS 65152210 65152374 65152210 ID=MsG0180003607.01.T01:cds;Parent=MsG0180003607.01.T01
Chr1 three_prime_UTR 65151812 65152209 65151812 ID=MsG0180003607.01.T01:three_prime_utr;Parent=MsG0180003607.01.T01
Gene Sequence

>MsG0180003607.01.T01

ATGAAAAGTTGGTTGATCGTTGATTATTACAATATTGGAATAGAAAAACTAATACTCGAGTCGTTGGCATTTGACTTGAAGTCTCTTTTCAAGATGATGAATGTTGCGAATGCGGCGGGTACGAGAAGACGACAACTTGCAGTTACAGTTGGGAAAGAGAGAAGGGAATCGTTGGTTCGGGCAAAACGACTTTGTAGAGTTGGAGTTAGTGATGCTGAAGTTGATGTTGATGTTGAAGCTGAAATGATGATTGATGAAGAACAATCTATTTTGGAGTCTCAGACTTCATTGGCTGTTGAAAATTTGAAATCTGCACTTGCTTATCAGGGGAAGGGTGCAGTGCAGAAAAGAGTAGGCGCCCTTCAAGAATTAAGGCGTTTACTGTCAAGATCTGAATTTCCTCCTGTTGAGTCTGCTGTTAAAGCTGGAGCAGTTGCCATACTAGTTCAGTGTCTTTCATTTGGTTCTCCAGATGAACAGTTGCTTGAAGCTGCTTGGTGTCTTACAAATATTGCTGCAGGGAATCCAGAGGAAACAAAAGCTTTGCTTCCTGCATTGCCTTTGCTTATTGCTCACCTTGGGGAAAAGAGCTCCTCACCTGTTGCTGAGCAGTGTGCTTGGGCACTGGGAAATGTGGCTGGTGAAGATGAAGAGTTGAGGAATGTTCTTCTAATTCAAGGGGCCTTAGTACCTCTTGCAAGAATGATGCTACCATACAGACGTTCAACTGTTAGAACAGCGGCCTGGGCTTTGTCTAATCTAATCAAGGGTCCAAATCCTAAAGCTGCTAACGAACTTATACGTGTTGATGGAGTATTGGATGCAATTGTTCGACACTTAACGAAAGCCAATTATCAACTAGTATTAGAGCTGGATGTTGGATTGTGGTATTGCATCTTGAAGACGATTCCAAAGTTTGGCGGAGAGAAGGCTTATTGGTTGCTGACCAATGAGGAGTTGTACTTTGATGCCAACAGAACACCCGAATATAAGAGAGCTATTAAGGCTCTAAAGGGAAGTGCTTCCATTCAGCGTTTGGGTGGAAATGACACCATCCATATGCAAAATGGCGGGACGGATGATGAATCAGCTACTGAAGTAGCATGGGTAGTTGTTTATCTATCAGCACTTTCAAATTTAGCTACCACCATGCTGGTGAAGAGTGACGTACTTCAATTGCTTGTAAATAGATTAGCGACATCAAACAGTTTGCAATTAATGATTCCAGTTTTGCGAAGTTTAGGTAATCTCGTTGCTGGTGATTCCCATGCAACTTATGCTGTTCTTGTACCTGGACTTGAAGAAGCAGCCTGGGTGCTGTCTAATATAGCTGCTGGTTCTGTTGAGCACAAGCAATTGATATATTCTAGCGAGGCAATGCCTTTGCTATTGCACCTTTTTTCTGCCGCCCCGTTTGATATAAGAAAGGAAGTTGCTTACATATTAGGCAACATTTGCGTTGCTCCAACTAAAGGCGACGAGATACCAAATCTGATCCTGGAGCATCTGGTTTCACTTGTTGAAAAAGGATGCTTGCCAGGTTTTATTGATTTGGTTAGATCTGCTGATATTGAAGCTGCCAAGCTAGGGCTTCAGTTTATAGAGCTGGTCCTGAGAGGGATGCCCAATGGAAAGGGCCCAAAGCTTGTAGAACAAGAAGATGGGATTGAAGCCATGGAAAGATTTCAGTTTCACGAAAATGAAGACGTGAGAACTATGGCAAATAGTCTAGTTGACAAGTATTTTGGAGAGGACTATGGGCTTGATGAGTAG
Protein sequence

>MsG0180003607.01.T01

MKSWLIVDYYNIGIEKLILESLAFDLKSLFKMMNVANAAGTRRRQLAVTVGKERRESLVRAKRLCRVGVSDAEVDVDVEAEMMIDEEQSILESQTSLAVENLKSALAYQGKGAVQKRVGALQELRRLLSRSEFPPVESAVKAGAVAILVQCLSFGSPDEQLLEAAWCLTNIAAGNPEETKALLPALPLLIAHLGEKSSSPVAEQCAWALGNVAGEDEELRNVLLIQGALVPLARMMLPYRRSTVRTAAWALSNLIKGPNPKAANELIRVDGVLDAIVRHLTKANYQLVLELDVGLWYCILKTIPKFGGEKAYWLLTNEELYFDANRTPEYKRAIKALKGSASIQRLGGNDTIHMQNGGTDDESATEVAWVVVYLSALSNLATTMLVKSDVLQLLVNRLATSNSLQLMIPVLRSLGNLVAGDSHATYAVLVPGLEEAAWVLSNIAAGSVEHKQLIYSSEAMPLLLHLFSAAPFDIRKEVAYILGNICVAPTKGDEIPNLILEHLVSLVEKGCLPGFIDLVRSADIEAAKLGLQFIELVLRGMPNGKGPKLVEQEDGIEAMERFQFHENEDVRTMANSLVDKYFGEDYGLDE*