AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180003710.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180003710.01.T01 MTR_1g068810 99.200 250 2 0 79 328 3 252 0.0 507
MsG0180003710.01.T01 MTR_1g068810 99.194 248 2 0 81 328 1 248 0.0 503
MsG0180003710.01.T01 MTR_1g068810 89.209 278 2 1 79 328 3 280 3.78e-177 491
MsG0180003710.01.T01 MTR_1g068810 100.000 224 0 0 105 328 1 224 5.58e-167 464
MsG0180003710.01.T01 MTR_1g068810 92.339 248 0 1 81 328 1 229 1.25e-165 460
MsG0180003710.01.T01 MTR_1g068810 100.000 216 0 0 113 328 1 216 1.46e-160 447
MsG0180003710.01.T01 MTR_1g068810 88.525 244 0 1 113 328 1 244 4.74e-154 432
MsG0180003710.01.T01 MTR_1g068810 87.879 231 0 1 113 315 1 231 6.42e-144 405
MsG0180003710.01.T01 MTR_1g096640 92.118 203 15 1 113 315 1 202 2.77e-138 391
MsG0180003710.01.T01 MTR_8g024050 84.772 197 30 0 132 328 61 257 6.71e-127 363
MsG0180003710.01.T01 MTR_7g118340 85.279 197 29 0 132 328 23 219 1.11e-125 359
MsG0180003710.01.T01 MTR_5g020840 82.741 197 34 0 132 328 17 213 2.44e-124 355
MsG0180003710.01.T01 MTR_8g077180 80.676 207 37 2 125 328 20 226 3.95e-122 350
MsG0180003710.01.T01 MTR_8g024050 87.821 156 19 0 132 287 16 171 8.73e-102 297
MsG0180003710.01.T01 MTR_1g112450 49.412 85 38 3 247 326 63 147 3.86e-17 78.2
MsG0180003710.01.T01 MTR_2g010430 34.356 163 80 6 151 289 82 241 1.31e-15 76.3
MsG0180003710.01.T01 MTR_1g112430 89.286 28 3 0 248 275 39 66 2.75e-11 58.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180003710.01.T01 AT3G53620 84.722 216 33 0 113 328 1 216 4.74e-138 390
MsG0180003710.01.T01 AT1G01050 86.802 197 26 0 132 328 16 212 1.74e-128 366
MsG0180003710.01.T01 AT1G01050 86.802 197 26 0 132 328 16 212 1.74e-128 366
MsG0180003710.01.T01 AT2G46860 84.264 197 31 0 132 328 20 216 8.31e-126 359
MsG0180003710.01.T01 AT4G01480 78.302 212 45 1 118 328 5 216 1.26e-121 348
MsG0180003710.01.T01 AT4G01480 78.302 212 45 1 118 328 5 216 1.26e-121 348
MsG0180003710.01.T01 AT2G18230 79.487 195 40 0 134 328 24 218 2.73e-115 332
MsG0180003710.01.T01 AT5G09650 34.161 161 83 5 151 289 92 251 8.92e-16 77.0

Find 105 sgRNAs with CRISPR-Local

Find 328 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTTAACTTTGTTAAATTT+TGG 0.082092 1:+67191866 MsG0180003710.01.T01:three_prime_UTR
CAAGAAAACTGGACTTATTA+AGG 0.226202 1:+67190373 MsG0180003710.01.T01:CDS
CACTGCTACATTTGGCCATT+TGG 0.243486 1:+67185857 MsG0180003710.01.T01:CDS
GAATTGTAGGTGGTTGAAAT+TGG 0.267700 1:+67190320 MsG0180003710.01.T01:intron
TCGCGGTGGGAATCTTGTTT+GGG 0.281569 1:-67189251 None:intergenic
TTGAAGATCTTGGGAGCTTC+AGG 0.285820 1:-67189503 None:intergenic
TTCGCGGTGGGAATCTTGTT+TGG 0.304545 1:-67189252 None:intergenic
TTTCTTCGTGCCAAAGCTAT+TGG 0.320096 1:+67191204 MsG0180003710.01.T01:CDS
ACTGTTAATGTTCAGGCTAA+TGG 0.334959 1:+67188559 MsG0180003710.01.T01:intron
ATCTTGTTTGGGGTCTCAAT+TGG 0.355560 1:-67189240 None:intergenic
TATGAACTTGACAAGAAAAC+TGG 0.356052 1:+67190362 MsG0180003710.01.T01:CDS
CAACAGGAGCCAGTTCTTCC+TGG 0.361097 1:+67191177 MsG0180003710.01.T01:intron
ACAAATGTTACATGCTATAT+AGG 0.367406 1:-67191804 None:intergenic
GCTTACACAATTGAAGATCT+TGG 0.376721 1:-67189513 None:intergenic
TGCTTAAGTAGAGGTGGAAA+TGG 0.377784 1:-67188127 None:intergenic
GTTGTGTATCCTCACAACTA+TGG 0.379576 1:+67190500 MsG0180003710.01.T01:CDS
GCCATGCACACTGCTACATT+TGG 0.405905 1:+67185849 MsG0180003710.01.T01:CDS
ATAATAACCAAGACATCAAT+GGG 0.410303 1:-67190557 None:intergenic
TTGTTTGGGGTCTCAATTGG+TGG 0.420292 1:-67189237 None:intergenic
CATAATAACCAAGACATCAA+TGG 0.424808 1:-67190558 None:intergenic
TGATGTCTTGGTTATTATGC+AGG 0.426309 1:+67190562 MsG0180003710.01.T01:CDS
AGAAAGCAGCCAGGAAGAAC+TGG 0.439777 1:-67191186 None:intergenic
CTTACACAATTGAAGATCTT+GGG 0.443122 1:-67189512 None:intergenic
ATCTCGAGGGAGAGAGAATA+CGG 0.444997 1:-67188233 None:intergenic
CCATGGCATGATCTTGAGAT+AGG 0.448676 1:+67189345 MsG0180003710.01.T01:CDS
GGCGGTAGTATTGATGCATA+TGG 0.450578 1:+67191691 MsG0180003710.01.T01:exon
AATTGTAGGTGGTTGAAATT+GGG 0.453086 1:+67190321 MsG0180003710.01.T01:intron
CAGGCTAATGGCTTCTGAAT+CGG 0.459794 1:+67188571 MsG0180003710.01.T01:intron
TCAGATACCTGATCAATCAT+AGG 0.466855 1:-67191234 None:intergenic
ACTACGTTGTGGAGAGTTTG+AGG 0.477682 1:+67191670 MsG0180003710.01.T01:CDS
GGAGAGAGAATACGGAAGTA+AGG 0.480258 1:-67188225 None:intergenic
ACGATTTCAGAAACTGCAAT+TGG 0.481587 1:-67188739 None:intergenic
CACAACGTAGTCTGCATACA+AGG 0.481707 1:-67191658 None:intergenic
TCTCATGCCTATGATTGATC+AGG 0.492132 1:+67191227 MsG0180003710.01.T01:CDS
GCTTAAGTAGAGGTGGAAAT+GGG 0.493203 1:-67188126 None:intergenic
CTTGTTGAGGATGCAAAGGA+AGG 0.495192 1:-67188159 None:intergenic
TTGTGTATCCTCACAACTAT+GGG 0.498500 1:+67190501 MsG0180003710.01.T01:CDS
CTTAAACAGAAAAGTGGAAG+CGG 0.498946 1:+67188067 MsG0180003710.01.T01:intron
CGCGGTGGGAATCTTGTTTG+GGG 0.501491 1:-67189250 None:intergenic
AACGTGAAGAAGGAATGAAA+TGG 0.503173 1:-67188200 None:intergenic
AGGCATGAGACCAATAGCTT+TGG 0.503559 1:-67191214 None:intergenic
GAAGAAGGAATGAAATGGAA+TGG 0.503560 1:-67188195 None:intergenic
ACCATCCTCACAAATAGTGC+GGG 0.507168 1:-67190531 None:intergenic
AATATGCATGTGTTGTCAGC+TGG 0.509898 1:-67191830 None:intergenic
GGATGCAAAGGAAGGGAAGG+AGG 0.510845 1:-67188151 None:intergenic
CCCCGCACTATTTGTGAGGA+TGG 0.512555 1:+67190530 MsG0180003710.01.T01:CDS
TGCTATATAGGATAGGATTA+CGG 0.512938 1:-67191792 None:intergenic
GAAAGGATCCTCTCATTAAG+AGG 0.518691 1:-67189291 None:intergenic
TAGGCATTACAATGATATCA+AGG 0.527302 1:+67191383 MsG0180003710.01.T01:CDS
GGAGGATGCTTAAGTAGAGG+TGG 0.532103 1:-67188133 None:intergenic
TGGTGACCCCATTGATGTCT+TGG 0.533354 1:+67190550 MsG0180003710.01.T01:CDS
TGTGCTTCCTCTTCAACTGT+CGG 0.533610 1:+67188257 MsG0180003710.01.T01:CDS
AATGGTTGCTTTGCTTGTTG+AGG 0.537493 1:-67188172 None:intergenic
AAGAGGAAGCACAGATCTCG+AGG 0.542306 1:-67188247 None:intergenic
AAGTAAGGAAAACGTGAAGA+AGG 0.543930 1:-67188210 None:intergenic
CTCATTAAGAGGTGGTGGTG+AGG 0.544313 1:-67189280 None:intergenic
TGAGGATGCAAAGGAAGGGA+AGG 0.545417 1:-67188154 None:intergenic
GGAATGCTCAATAGCTTCAA+AGG 0.545999 1:-67191511 None:intergenic
TCCTTTCATCATTGACTAGG+AGG 0.547208 1:+67189307 MsG0180003710.01.T01:CDS
ATCCTCTCATTAAGAGGTGG+TGG 0.548349 1:-67189285 None:intergenic
ATTTCAGAAACTGCAATTGG+TGG 0.561215 1:-67188736 None:intergenic
GGATCCTTTCATCATTGACT+AGG 0.568164 1:+67189304 MsG0180003710.01.T01:CDS
GATACACAACTGATGAGTAA+AGG 0.570339 1:-67190487 None:intergenic
CAAAGGCAGATGAGGAAGGA+AGG 0.576115 1:-67191494 None:intergenic
TTAAACAGAAAAGTGGAAGC+GGG 0.579424 1:+67188068 MsG0180003710.01.T01:intron
GGTCTGTTGCTGCACACCCA+TGG 0.580873 1:+67189328 MsG0180003710.01.T01:CDS
GAAGGAGGATGCTTAAGTAG+AGG 0.581712 1:-67188136 None:intergenic
GTGCTGATGATCCTGAGTAT+AGG 0.582724 1:+67191364 MsG0180003710.01.T01:CDS
GCGGTAGTATTGATGCATAT+GGG 0.588298 1:+67191692 MsG0180003710.01.T01:exon
TGTTACATGCTATATAGGAT+AGG 0.588981 1:-67191799 None:intergenic
ACCTCCTAGTCAATGATGAA+AGG 0.589112 1:-67189308 None:intergenic
TAGGTGGTTGAAATTGGGAA+AGG 0.590703 1:+67190326 MsG0180003710.01.T01:intron
TGGTGAGGTGTAATTCGCGG+TGG 0.595709 1:-67189265 None:intergenic
AATAGCTTCAAAGGCAGATG+AGG 0.596063 1:-67191502 None:intergenic
TGAAATTGGGAAAGGAAACA+AGG 0.596735 1:+67190334 MsG0180003710.01.T01:CDS
ATATGCATGTGTTGTCAGCT+GGG 0.599753 1:-67191829 None:intergenic
CCTATCTCAAGATCATGCCA+TGG 0.600294 1:-67189345 None:intergenic
CTATCTCAAGATCATGCCAT+GGG 0.603760 1:-67189344 None:intergenic
TGGTGGTGAGGTGTAATTCG+CGG 0.604155 1:-67189268 None:intergenic
GGTGAGGTGTAATTCGCGGT+GGG 0.605265 1:-67189264 None:intergenic
GCTTCAAAGGCAGATGAGGA+AGG 0.607869 1:-67191498 None:intergenic
CACCATCCTCACAAATAGTG+CGG 0.608255 1:-67190532 None:intergenic
AAACGCACCGACAGTTGAAG+AGG 0.611901 1:-67188264 None:intergenic
ATTTCAGCTAAACGATGTGG+AGG 0.614529 1:-67191411 None:intergenic
TTGGCACGAAGAAAGCAGCC+AGG 0.615889 1:-67191195 None:intergenic
CACCACCACCTCTTAATGAG+AGG 0.621436 1:+67189283 MsG0180003710.01.T01:CDS
TCATTGTAATGCCTATACTC+AGG 0.624794 1:-67191375 None:intergenic
GCCAAATGTAGCAGTGTGCA+TGG 0.625031 1:-67185850 None:intergenic
TTGTTGAGGATGCAAAGGAA+GGG 0.629237 1:-67188158 None:intergenic
TTACAAGAAGAATGAGAACA+AGG 0.636721 1:+67191452 MsG0180003710.01.T01:CDS
AGGAATGAAATGGAATGGAA+TGG 0.648925 1:-67188190 None:intergenic
TTTGCTTGTTGAGGATGCAA+AGG 0.649239 1:-67188163 None:intergenic
CCATCCTCACAAATAGTGCG+GGG 0.650576 1:-67190530 None:intergenic
CGGATTTCAGCTAAACGATG+TGG 0.654970 1:-67191414 None:intergenic
GAAATGGGAAAATGTGAGTG+AGG 0.668719 1:-67188111 None:intergenic
AGGATCCTCTCATTAAGAGG+TGG 0.671103 1:-67189288 None:intergenic
GGGATAAACCCATAGTTGTG+AGG 0.674435 1:-67190509 None:intergenic
CAACTGATGAGTAAAGGACC+CGG 0.675914 1:-67190481 None:intergenic
AGAGGAAGCACAGATCTCGA+GGG 0.683236 1:-67188246 None:intergenic
TTTCAGCTAAACGATGTGGA+GGG 0.687080 1:-67191410 None:intergenic
CATCCTCACAAATAGTGCGG+GGG 0.690869 1:-67190529 None:intergenic
TGAATCGGAAACTGTCACTG+TGG 0.703517 1:+67188586 MsG0180003710.01.T01:CDS
CTTGTATGCAGACTACGTTG+TGG 0.725981 1:+67191659 MsG0180003710.01.T01:CDS
ACGTTGTGGAGAGTTTGAGG+CGG 0.743485 1:+67191673 MsG0180003710.01.T01:CDS
TAATAACCAAGACATCAATG+GGG 0.783648 1:-67190556 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTATTTATTTAATTTAAT+TGG - Chr1:67188039-67188058 None:intergenic 0.0%
!!! ACTTTTTTTTTTTTTTTTTC+TGG + Chr1:67189090-67189109 MsG0180003710.01.T01:intron 10.0%
!!! ATTAGTTTAATCTTAAAAAA+TGG + Chr1:67188900-67188919 MsG0180003710.01.T01:intron 10.0%
!!! CTTTTTTTTTTTTTTTTTCT+GGG + Chr1:67189091-67189110 MsG0180003710.01.T01:intron 10.0%
!!! TTTTTTTTTTTTTTTTTCTG+GGG + Chr1:67189092-67189111 MsG0180003710.01.T01:intron 10.0%
!! TATTAAAAAAAAAAAACACC+TGG - Chr1:67188857-67188876 None:intergenic 15.0%
!! TTACTTATAAATTTACCAAA+TGG - Chr1:67185875-67185894 None:intergenic 15.0%
!! TTTGACTAATAATAAAACAT+AGG + Chr1:67187555-67187574 MsG0180003710.01.T01:intron 15.0%
!!! AATCATCATAAAAGATATTT+TGG - Chr1:67189815-67189834 None:intergenic 15.0%
!!! ACATAATTTCAATGATATTT+TGG - Chr1:67189143-67189162 None:intergenic 15.0%
!!! ATTTACTAGTAAGATATTTT+TGG + Chr1:67188931-67188950 MsG0180003710.01.T01:intron 15.0%
!!! ATTTTGCTTATATTTTGAAA+CGG + Chr1:67186704-67186723 MsG0180003710.01.T01:intron 15.0%
!!! ATTTTGCTTATATTTTGAAA+CGG - Chr1:67186723-67186704 None:intergenic 15.0%
!!! TGATTATGATTATTTTTTTC+AGG + Chr1:67189200-67189219 MsG0180003710.01.T01:intron 15.0%
!! AAAAAAAAAGTTATGATGCA+TGG - Chr1:67189081-67189100 None:intergenic 20.0%
!! ACTAATTCTTATGAAATTCA+GGG + Chr1:67191312-67191331 MsG0180003710.01.T01:intron 20.0%
!! AGATGATTATAATTGATTGA+TGG - Chr1:67186469-67186488 None:intergenic 20.0%
!! ATAATCATCTAATCATAGAA+AGG + Chr1:67186479-67186498 MsG0180003710.01.T01:intron 20.0%
!! ATAGTGCAAATATTCTAAAT+AGG + Chr1:67187920-67187939 MsG0180003710.01.T01:intron 20.0%
!! GTATATGTTTCTTAGAATAA+TGG + Chr1:67189563-67189582 MsG0180003710.01.T01:intron 20.0%
!! TAAATGAATGAACCTAAAAA+TGG + Chr1:67186680-67186699 MsG0180003710.01.T01:intron 20.0%
!! TACAATTTCACAATAATACA+TGG + Chr1:67191052-67191071 MsG0180003710.01.T01:intron 20.0%
!! TTGAAATATTGATGAATTGT+AGG + Chr1:67190307-67190326 MsG0180003710.01.T01:intron 20.0%
!!! AATGAAATTTTCTCAAGTAT+TGG - Chr1:67188387-67188406 None:intergenic 20.0%
!!! ATAAGCAAAATTCACTTTTT+AGG + Chr1:67186602-67186621 MsG0180003710.01.T01:intron 20.0%
!!! ATAAGCAAAATTCCATTTTT+AGG - Chr1:67186695-67186714 None:intergenic 20.0%
!!! ATTTTGTTTTGTGAGATTAA+GGG + Chr1:67188819-67188838 MsG0180003710.01.T01:intron 20.0%
!!! GATTTTAAACAAAATTGTGT+TGG - Chr1:67186134-67186153 None:intergenic 20.0%
!!! TAGGATTTTTTTTCTTCTTA+CGG + Chr1:67186506-67186525 MsG0180003710.01.T01:intron 20.0%
!!! TGCTTAACTTTGTTAAATTT+TGG + Chr1:67191866-67191885 MsG0180003710.01.T01:three_prime_UTR 20.0%
!!! TTAAGTTTAAAATTGTGCAT+TGG - Chr1:67187758-67187777 None:intergenic 20.0%
!!! TTGTAAAACCTATGTTTTTT+TGG - Chr1:67187592-67187611 None:intergenic 20.0%
!!! TTGTGAGTAAATTTTGAATA+TGG + Chr1:67191020-67191039 MsG0180003710.01.T01:intron 20.0%
!!! TTTCATAATCATTTGTTGTT+TGG - Chr1:67186423-67186442 None:intergenic 20.0%
!!! TTTTATTTGTATTGTTGTGA+AGG + Chr1:67191634-67191653 MsG0180003710.01.T01:intron 20.0%
! AAATATTGATGAATTGTAGG+TGG + Chr1:67190310-67190329 MsG0180003710.01.T01:intron 25.0%
! AAATTAATGTAGTACCAGAA+TGG - Chr1:67187058-67187077 None:intergenic 25.0%
! AATTGTAACTGTTAATGTTC+AGG + Chr1:67188552-67188571 MsG0180003710.01.T01:intron 25.0%
! ACAAATGTTACATGCTATAT+AGG - Chr1:67191807-67191826 None:intergenic 25.0%
! AGAATGTACAAGTTCAAAAA+AGG - Chr1:67190220-67190239 None:intergenic 25.0%
! AGCAGGTTTATTATAAGAAA+TGG + Chr1:67189977-67189996 MsG0180003710.01.T01:intron 25.0%
! ATAATAACCAAGACATCAAT+GGG - Chr1:67190560-67190579 None:intergenic 25.0%
! ATATTGATCATTAGAGCATA+AGG + Chr1:67189395-67189414 MsG0180003710.01.T01:intron 25.0%
! ATGCTGAGTAAGAATAATTA+TGG + Chr1:67186989-67187008 MsG0180003710.01.T01:intron 25.0%
! CACTAATTCTTATGAAATTC+AGG + Chr1:67191311-67191330 MsG0180003710.01.T01:intron 25.0%
! CATCAATACAATAGAAAGAT+CGG - Chr1:67185932-67185951 None:intergenic 25.0%
! CATCAATATTTCAAACATGA+AGG - Chr1:67190301-67190320 None:intergenic 25.0%
! CATTCATTTAATGATGTATG+TGG - Chr1:67186670-67186689 None:intergenic 25.0%
! CATTTAATTAATGATGTACG+TGG + Chr1:67186631-67186650 MsG0180003710.01.T01:intron 25.0%
! CTAAATAGGTCAAGTAATAT+GGG + Chr1:67187934-67187953 MsG0180003710.01.T01:intron 25.0%
! GAAAACACTATGAAATGAAA+CGG - Chr1:67188310-67188329 None:intergenic 25.0%
! GAATATATCCTTATATCCTA+TGG - Chr1:67188017-67188036 None:intergenic 25.0%
! GTATAATAATAGTCAACTTC+TGG + Chr1:67190803-67190822 MsG0180003710.01.T01:intron 25.0%
! TAAGCAATGTTGTTGAAAAA+TGG + Chr1:67189368-67189387 MsG0180003710.01.T01:intron 25.0%
! TATGTGTACCAAAAAAACAT+AGG + Chr1:67187581-67187600 MsG0180003710.01.T01:intron 25.0%
! TCTAAATAGGTCAAGTAATA+TGG + Chr1:67187933-67187952 MsG0180003710.01.T01:intron 25.0%
! TCTGTTAAAACATAATTTCC+AGG + Chr1:67191576-67191595 MsG0180003710.01.T01:intron 25.0%
! TGCAATCTTGTTAATTCATT+TGG + Chr1:67188791-67188810 MsG0180003710.01.T01:intron 25.0%
! TTAATTACCTATATCCATTC+TGG + Chr1:67187041-67187060 MsG0180003710.01.T01:intron 25.0%
! TTTAATCATATGAGTGATTG+TGG - Chr1:67187330-67187349 None:intergenic 25.0%
! TTTGAACTTGTACATTCTTA+AGG + Chr1:67190222-67190241 MsG0180003710.01.T01:intron 25.0%
!! AATACATACATGTTTCCTTT+TGG - Chr1:67190746-67190765 None:intergenic 25.0%
!! ACACTTTTATTCCATATTAC+CGG + Chr1:67186941-67186960 MsG0180003710.01.T01:intron 25.0%
!! ATTTTCCTTAAACAGAAAAG+TGG + Chr1:67188061-67188080 MsG0180003710.01.T01:intron 25.0%
!!! ACATTTTTTACTTTGTATGC+TGG + Chr1:67189636-67189655 MsG0180003710.01.T01:intron 25.0%
!!! AGGATTTTTTTTCTTCTTAC+GGG + Chr1:67186507-67186526 MsG0180003710.01.T01:intron 25.0%
!!! CATTTTGTTTTGTGAGATTA+AGG + Chr1:67188818-67188837 MsG0180003710.01.T01:intron 25.0%
!!! CTTTTGGAATTCAAAGAATA+CGG - Chr1:67190730-67190749 None:intergenic 25.0%
!!! TCGTTTTTGTAATTGAAGTT+AGG + Chr1:67187516-67187535 MsG0180003710.01.T01:intron 25.0%
!!! TGTTTTCTTTGCTTTTGAAA+GGG + Chr1:67188700-67188719 MsG0180003710.01.T01:intron 25.0%
AAGAAACACCAAAAGTAAAC+AGG + Chr1:67189858-67189877 MsG0180003710.01.T01:intron 30.0%
AATTGTAGGTGGTTGAAATT+GGG + Chr1:67190321-67190340 MsG0180003710.01.T01:intron 30.0%
ACTATGTGAATCATCAACTA+AGG - Chr1:67189885-67189904 None:intergenic 30.0%
AGATCCATCATTATCATGTT+TGG - Chr1:67189166-67189185 None:intergenic 30.0%
ATAAAAAATGAAGTTGCGTG+TGG - Chr1:67188355-67188374 None:intergenic 30.0%
ATAACATGGAGTTTGCAAAA+CGG - Chr1:67188442-67188461 None:intergenic 30.0%
ATAGCTCAGAAGTAAAGATA+AGG - Chr1:67190951-67190970 None:intergenic 30.0%
CAAGAAAACTGGACTTATTA+AGG + Chr1:67190373-67190392 MsG0180003710.01.T01:CDS 30.0%
CATAAAATCGAAACTGAGAA+TGG + Chr1:67186559-67186578 MsG0180003710.01.T01:intron 30.0%
CATAATAACCAAGACATCAA+TGG - Chr1:67190561-67190580 None:intergenic 30.0%
CGTATTCTTTGAATTCCAAA+AGG + Chr1:67190728-67190747 MsG0180003710.01.T01:intron 30.0%
CTAATCATAGAAAGGATAGT+AGG + Chr1:67186487-67186506 MsG0180003710.01.T01:intron 30.0%
CTATGTGAATCATCAACTAA+GGG - Chr1:67189884-67189903 None:intergenic 30.0%
CTTACACAATTGAAGATCTT+GGG - Chr1:67189515-67189534 None:intergenic 30.0%
GATGTATGTGGTTCATAATA+TGG - Chr1:67186658-67186677 None:intergenic 30.0%
GGATTCTGTTATTAGTTATG+TGG + Chr1:67190700-67190719 MsG0180003710.01.T01:intron 30.0%
GTTTGATTCCATAGGATATA+AGG + Chr1:67188006-67188025 MsG0180003710.01.T01:intron 30.0%
TAATAACCAAGACATCAATG+GGG - Chr1:67190559-67190578 None:intergenic 30.0%
TAATTGTGATAGAGAGAACA+TGG + Chr1:67189688-67189707 MsG0180003710.01.T01:intron 30.0%
TAGGCATTACAATGATATCA+AGG + Chr1:67191383-67191402 MsG0180003710.01.T01:CDS 30.0%
TATGAACTTGACAAGAAAAC+TGG + Chr1:67190362-67190381 MsG0180003710.01.T01:CDS 30.0%
TATGTTGTGATCTTCATTGA+GGG + Chr1:67190262-67190281 MsG0180003710.01.T01:intron 30.0%
TCAACTAGGTCAAGTAATAT+GGG - Chr1:67187721-67187740 None:intergenic 30.0%
TCAGTAACTCAACAATAACA+TGG - Chr1:67188456-67188475 None:intergenic 30.0%
TCATTCTTGCTTCATTTATC+CGG + Chr1:67191936-67191955 MsG0180003710.01.T01:three_prime_UTR 30.0%
TCATTTCGTACTAACGTTTA+TGG - Chr1:67186359-67186378 None:intergenic 30.0%
TCCATGTAAGTAACAATGAT+GGG + Chr1:67191531-67191550 MsG0180003710.01.T01:intron 30.0%
TGAATGGAAGGTAAGAAAAT+TGG + Chr1:67187984-67188003 MsG0180003710.01.T01:intron 30.0%
TGATTTCAAATGCAAGAAGT+TGG + Chr1:67190833-67190852 MsG0180003710.01.T01:intron 30.0%
TGCAATTCTGTTCTCAAATT+TGG + Chr1:67190679-67190698 MsG0180003710.01.T01:intron 30.0%
TGCTATATAGGATAGGATTA+CGG - Chr1:67191795-67191814 None:intergenic 30.0%
TGGACTTATTAAGGTGATTA+TGG + Chr1:67190382-67190401 MsG0180003710.01.T01:intron 30.0%
TGTAATCTTCAAAAAAGCGA+CGG - Chr1:67191437-67191456 None:intergenic 30.0%
TGTTACATGCTATATAGGAT+AGG - Chr1:67191802-67191821 None:intergenic 30.0%
TTACAAGAAGAATGAGAACA+AGG + Chr1:67191452-67191471 MsG0180003710.01.T01:CDS 30.0%
TTATGTTGTGATCTTCATTG+AGG + Chr1:67190261-67190280 MsG0180003710.01.T01:intron 30.0%
TTCCATGTAAGTAACAATGA+TGG + Chr1:67191530-67191549 MsG0180003710.01.T01:intron 30.0%
! ATGTCCAAACATGATAATGA+TGG + Chr1:67189159-67189178 MsG0180003710.01.T01:intron 30.0%
! ATTAAGTCTGATTTGTGTTC+AGG - Chr1:67190054-67190073 None:intergenic 30.0%
! CATTCTCAGTTTCGATTTTA+TGG - Chr1:67186561-67186580 None:intergenic 30.0%
! GCTGGAATGAAATTTTGTAA+TGG + Chr1:67189654-67189673 MsG0180003710.01.T01:intron 30.0%
!! CAACGAAAAGTTAATTTGCA+AGG - Chr1:67190616-67190635 None:intergenic 30.0%
!! GAAAATTGGTTTGATTCCAT+AGG + Chr1:67187998-67188017 MsG0180003710.01.T01:intron 30.0%
!! GTGTTTTCTTTGCTTTTGAA+AGG + Chr1:67188699-67188718 MsG0180003710.01.T01:intron 30.0%
!!! ATTCTTTTTTGTGCTACAAC+AGG + Chr1:67191161-67191180 MsG0180003710.01.T01:intron 30.0%
!!! GTGTTTCTTGTTTTCATTTC+CGG - Chr1:67189847-67189866 None:intergenic 30.0%
!!! TGCTTATATTTTGAAACGGA+GGG + Chr1:67186708-67186727 MsG0180003710.01.T01:intron 30.0%
!!! TGCTTATATTTTGAAACGGA+GGG - Chr1:67186727-67186708 None:intergenic 30.0%
!!! TTGCTTATATTTTGAAACGG+AGG + Chr1:67186707-67186726 MsG0180003710.01.T01:intron 30.0%
!!! TTGCTTATATTTTGAAACGG+AGG - Chr1:67186726-67186707 None:intergenic 30.0%
!!! TTTTTTTCAGGCTGAAGAAA+TGG + Chr1:67189212-67189231 MsG0180003710.01.T01:intron 30.0%
!!! TTTTTTTTTTAGCCGACTCA+AGG + Chr1:67190981-67191000 MsG0180003710.01.T01:intron 30.0%
AACACTATGAAATGAAACGG+TGG - Chr1:67188307-67188326 None:intergenic 35.0%
AACGTGAAGAAGGAATGAAA+TGG - Chr1:67188203-67188222 None:intergenic 35.0%
AAGAGAAGTTATTGCCATCT+AGG - Chr1:67191272-67191291 None:intergenic 35.0%
AAGTAAGGAAAACGTGAAGA+AGG - Chr1:67188213-67188232 None:intergenic 35.0%
AAGTTATTGCCATCTAGGAA+AGG - Chr1:67191267-67191286 None:intergenic 35.0%
AATGATACATCGTAGTACGT+GGG + Chr1:67186166-67186185 MsG0180003710.01.T01:intron 35.0%
AATGGCAACAAGTACAACAA+TGG - Chr1:67190426-67190445 None:intergenic 35.0%
AATTTGAACCCCTCAACAAA+CGG - Chr1:67186833-67186852 None:intergenic 35.0%
ACGATTTCAGAAACTGCAAT+TGG - Chr1:67188742-67188761 None:intergenic 35.0%
ACTGTTAATGTTCAGGCTAA+TGG + Chr1:67188559-67188578 MsG0180003710.01.T01:intron 35.0%
AGATAAGGCTCAATATGTCA+AGG - Chr1:67190936-67190955 None:intergenic 35.0%
AGGAATGAAATGGAATGGAA+TGG - Chr1:67188193-67188212 None:intergenic 35.0%
AGTCCTCAATACTATGTGAA+TGG + Chr1:67187968-67187987 MsG0180003710.01.T01:intron 35.0%
AGTTATTGCCATCTAGGAAA+GGG - Chr1:67191266-67191285 None:intergenic 35.0%
ATAGGTCAAGTAATATGGGA+CGG + Chr1:67187938-67187957 MsG0180003710.01.T01:intron 35.0%
ATCATAGGACGATAAACCAT+AGG - Chr1:67186290-67186309 None:intergenic 35.0%
ATTTCAGAAACTGCAATTGG+TGG - Chr1:67188739-67188758 None:intergenic 35.0%
CTCAATACTATGTGAATGGA+AGG + Chr1:67187972-67187991 MsG0180003710.01.T01:intron 35.0%
CTGCTTAACTAGATAAAGCA+AGG - Chr1:67189962-67189981 None:intergenic 35.0%
CTTAAACAGAAAAGTGGAAG+CGG + Chr1:67188067-67188086 MsG0180003710.01.T01:intron 35.0%
CTTCCATTCACATAGTATTG+AGG - Chr1:67187974-67187993 None:intergenic 35.0%
CTTCGATTGAGTAGAACATT+GGG - Chr1:67186234-67186253 None:intergenic 35.0%
CTTGCTTTATCTAGTTAAGC+AGG + Chr1:67189960-67189979 MsG0180003710.01.T01:intron 35.0%
GAACTTGTACATTCTTAAGG+TGG + Chr1:67190225-67190244 MsG0180003710.01.T01:intron 35.0%
GAAGAAGGAATGAAATGGAA+TGG - Chr1:67188198-67188217 None:intergenic 35.0%
GAATTGTAGGTGGTTGAAAT+TGG + Chr1:67190320-67190339 MsG0180003710.01.T01:intron 35.0%
GACGATAGAGATCAAAACTT+TGG - Chr1:67187137-67187156 None:intergenic 35.0%
GAGTATGAAAACTGAAATCC+TGG - Chr1:67191597-67191616 None:intergenic 35.0%
GATACACAACTGATGAGTAA+AGG - Chr1:67190490-67190509 None:intergenic 35.0%
GATTGTTTCCAATCACAACT+TGG + Chr1:67190188-67190207 MsG0180003710.01.T01:intron 35.0%
GCTTACACAATTGAAGATCT+TGG - Chr1:67189516-67189535 None:intergenic 35.0%
GGGAATTTATTGCCTAACTT+TGG - Chr1:67187099-67187118 None:intergenic 35.0%
GTCAACTAGGTCAAGTAATA+TGG - Chr1:67187722-67187741 None:intergenic 35.0%
TATATTGCTGACCTGTTGAA+TGG + Chr1:67190007-67190026 MsG0180003710.01.T01:intron 35.0%
TCAGATACCTGATCAATCAT+AGG - Chr1:67191237-67191256 None:intergenic 35.0%
TCATTGTAATGCCTATACTC+AGG - Chr1:67191378-67191397 None:intergenic 35.0%
TGAAATTGGGAAAGGAAACA+AGG + Chr1:67190334-67190353 MsG0180003710.01.T01:CDS 35.0%
TGATGTCTTGGTTATTATGC+AGG + Chr1:67190562-67190581 MsG0180003710.01.T01:CDS 35.0%
TGTAGTACCAGAATGGATAT+AGG - Chr1:67187051-67187070 None:intergenic 35.0%
TTAAACAGAAAAGTGGAAGC+GGG + Chr1:67188068-67188087 MsG0180003710.01.T01:intron 35.0%
TTCCATATTACCGGAATATG+CGG + Chr1:67186950-67186969 MsG0180003710.01.T01:intron 35.0%
TTGTGTATCCTCACAACTAT+GGG + Chr1:67190501-67190520 MsG0180003710.01.T01:CDS 35.0%
TTTCAAATGCAAGAAGTTGG+TGG + Chr1:67190836-67190855 MsG0180003710.01.T01:intron 35.0%
! ACCCATCATTGTTACTTACA+TGG - Chr1:67191535-67191554 None:intergenic 35.0%
! CTAAGCATGCTTTTATGTGT+AGG + Chr1:67190454-67190473 MsG0180003710.01.T01:intron 35.0%
! CTACACATAAAAGCATGCTT+AGG - Chr1:67190456-67190475 None:intergenic 35.0%
! GATGCATATGGGATTTTGTT+TGG + Chr1:67191703-67191722 MsG0180003710.01.T01:three_prime_UTR 35.0%
! TAGTGTTTTCCCAACAATGT+AGG + Chr1:67189479-67189498 MsG0180003710.01.T01:intron 35.0%
! TTTTGTGCCAAATCACCAAA+CGG - Chr1:67186778-67186797 None:intergenic 35.0%
!! ACATTTTGATCACCTTGAGT+CGG - Chr1:67190996-67191015 None:intergenic 35.0%
!!! TTTGGTGTCTAGTCTTTTGA+GGG - Chr1:67187119-67187138 None:intergenic 35.0%
AATAGCTTCAAAGGCAGATG+AGG - Chr1:67191505-67191524 None:intergenic 40.0%
AATATGCATGTGTTGTCAGC+TGG - Chr1:67191833-67191852 None:intergenic 40.0%
AATGAAGTTGCGTGTGGTTA+TGG - Chr1:67188349-67188368 None:intergenic 40.0%
ACCTCCTAGTCAATGATGAA+AGG - Chr1:67189311-67189330 None:intergenic 40.0%
ACGGTGTGTTAAGTTTGCAT+CGG - Chr1:67186814-67186833 None:intergenic 40.0%
AGTAATGCTTGTGCGCTATA+GGG + Chr1:67190078-67190097 MsG0180003710.01.T01:intron 40.0%
ATATGCATGTGTTGTCAGCT+GGG - Chr1:67191832-67191851 None:intergenic 40.0%
ATCCGCATATTCCGGTAATA+TGG - Chr1:67186955-67186974 None:intergenic 40.0%
ATTTCAGCTAAACGATGTGG+AGG - Chr1:67191414-67191433 None:intergenic 40.0%
CAACAGGTCAGCAATATAAC+AGG - Chr1:67190005-67190024 None:intergenic 40.0%
CTAGGTCAAGTAATATGGGA+CGG - Chr1:67187717-67187736 None:intergenic 40.0%
CTATCTCAAGATCATGCCAT+GGG - Chr1:67189347-67189366 None:intergenic 40.0%
GAAACATTCCCTTTCCTAGA+TGG + Chr1:67191255-67191274 MsG0180003710.01.T01:intron 40.0%
GAAAGGATCCTCTCATTAAG+AGG - Chr1:67189294-67189313 None:intergenic 40.0%
GAAATGGGAAAATGTGAGTG+AGG - Chr1:67188114-67188133 None:intergenic 40.0%
GAATGATACATCGTAGTACG+TGG + Chr1:67186165-67186184 MsG0180003710.01.T01:intron 40.0%
GCTTAAGTAGAGGTGGAAAT+GGG - Chr1:67188129-67188148 None:intergenic 40.0%
GCTTCGATTGAGTAGAACAT+TGG - Chr1:67186235-67186254 None:intergenic 40.0%
GGAATGCTCAATAGCTTCAA+AGG - Chr1:67191514-67191533 None:intergenic 40.0%
GGTTAAGCGTTAAGCATGTT+GGG + Chr1:67190099-67190118 MsG0180003710.01.T01:intron 40.0%
GTTGTGTATCCTCACAACTA+TGG + Chr1:67190500-67190519 MsG0180003710.01.T01:CDS 40.0%
GTTTCCAATCACAACTTGGA+CGG + Chr1:67190192-67190211 MsG0180003710.01.T01:intron 40.0%
TAGGTGGTTGAAATTGGGAA+AGG + Chr1:67190326-67190345 MsG0180003710.01.T01:intron 40.0%
TAGTAATGCTTGTGCGCTAT+AGG + Chr1:67190077-67190096 MsG0180003710.01.T01:intron 40.0%
TCTCATGCCTATGATTGATC+AGG + Chr1:67191227-67191246 MsG0180003710.01.T01:CDS 40.0%
TGAGCATCTACTCCAAAGTT+AGG + Chr1:67187084-67187103 MsG0180003710.01.T01:intron 40.0%
TGCTTAAGTAGAGGTGGAAA+TGG - Chr1:67188130-67188149 None:intergenic 40.0%
TGGTTGTGTTCGATACTTTG+AGG - Chr1:67186339-67186358 None:intergenic 40.0%
TTGTTGAGGATGCAAAGGAA+GGG - Chr1:67188161-67188180 None:intergenic 40.0%
TTTCAGCTAAACGATGTGGA+GGG - Chr1:67191413-67191432 None:intergenic 40.0%
TTTCTTCGTGCCAAAGCTAT+TGG + Chr1:67191204-67191223 MsG0180003710.01.T01:CDS 40.0%
TTTCTTCTTACGGGATGTTG+TGG + Chr1:67186516-67186535 MsG0180003710.01.T01:intron 40.0%
! AATGGTTGCTTTGCTTGTTG+AGG - Chr1:67188175-67188194 None:intergenic 40.0%
! ACTAAGGGCCTGTTTACTTT+TGG - Chr1:67189869-67189888 None:intergenic 40.0%
! ACTTAACACACCGTTTGTTG+AGG + Chr1:67186820-67186839 MsG0180003710.01.T01:intron 40.0%
! ATCTTGTTTGGGGTCTCAAT+TGG - Chr1:67189243-67189262 None:intergenic 40.0%
! CTTAACACACCGTTTGTTGA+GGG + Chr1:67186821-67186840 MsG0180003710.01.T01:intron 40.0%
! CTTGCATTTGAAATCACAGC+TGG - Chr1:67190829-67190848 None:intergenic 40.0%
! GGAATATCCGTTTGGTGATT+TGG + Chr1:67186768-67186787 MsG0180003710.01.T01:intron 40.0%
! GGATCCTTTCATCATTGACT+AGG + Chr1:67189304-67189323 MsG0180003710.01.T01:CDS 40.0%
! TCCTTTCATCATTGACTAGG+AGG + Chr1:67189307-67189326 MsG0180003710.01.T01:CDS 40.0%
! TTAACACACCGTTTGTTGAG+GGG + Chr1:67186822-67186841 MsG0180003710.01.T01:intron 40.0%
! TTTGCTTGTTGAGGATGCAA+AGG - Chr1:67188166-67188185 None:intergenic 40.0%
!! ACTTTGAGGTTGACACCTTA+AGG - Chr1:67186325-67186344 None:intergenic 40.0%
!! ATTTGTTGTTTGGTGCCTTG+AGG - Chr1:67186413-67186432 None:intergenic 40.0%
!! CGCTTCCACTTTTCTGTTTA+AGG - Chr1:67188069-67188088 None:intergenic 40.0%
!! CTTTGAGGTTGACACCTTAA+GGG - Chr1:67186324-67186343 None:intergenic 40.0%
!! CTTTTATGTGTAGGTTGACC+GGG + Chr1:67190463-67190482 MsG0180003710.01.T01:intron 40.0%
!! GCGGTAGTATTGATGCATAT+GGG + Chr1:67191692-67191711 MsG0180003710.01.T01:exon 40.0%
!! GCTTTTATGTGTAGGTTGAC+CGG + Chr1:67190462-67190481 MsG0180003710.01.T01:intron 40.0%
!!! CTTTGGTGTCTAGTCTTTTG+AGG - Chr1:67187120-67187139 None:intergenic 40.0%
!!! CTTTTGAAAGGGTGTTTCTG+AGG + Chr1:67188711-67188730 MsG0180003710.01.T01:intron 40.0%
AAATGTGCTCCGAGAAGTCA+TGG + Chr1:67186380-67186399 MsG0180003710.01.T01:intron 45.0%
AAGCTGAGCTGTAGCTGATT+GGG - Chr1:67186915-67186934 None:intergenic 45.0%
ACCATCCTCACAAATAGTGC+GGG - Chr1:67190534-67190553 None:intergenic 45.0%
ACGGTGGCGTAAAAGAGAAA+AGG - Chr1:67188291-67188310 None:intergenic 45.0%
ACTACGTTGTGGAGAGTTTG+AGG + Chr1:67191670-67191689 MsG0180003710.01.T01:CDS 45.0%
AGCTTCAGGACCTACATTGT+TGG - Chr1:67189492-67189511 None:intergenic 45.0%
AGGATCCTCTCATTAAGAGG+TGG - Chr1:67189291-67189310 None:intergenic 45.0%
AGGCATGAGACCAATAGCTT+TGG - Chr1:67191217-67191236 None:intergenic 45.0%
ATCCTCTCATTAAGAGGTGG+TGG - Chr1:67189288-67189307 None:intergenic 45.0%
ATCTCGAGGGAGAGAGAATA+CGG - Chr1:67188236-67188255 None:intergenic 45.0%
CAACTGATGAGTAAAGGACC+CGG - Chr1:67190484-67190503 None:intergenic 45.0%
CACAACGTAGTCTGCATACA+AGG - Chr1:67191661-67191680 None:intergenic 45.0%
CACCATCCTCACAAATAGTG+CGG - Chr1:67190535-67190554 None:intergenic 45.0%
CACTGCTACATTTGGCCATT+TGG + Chr1:67185857-67185876 MsG0180003710.01.T01:CDS 45.0%
CAGGCTAATGGCTTCTGAAT+CGG + Chr1:67188571-67188590 MsG0180003710.01.T01:intron 45.0%
CATACGTGACAGAGTCAACT+AGG - Chr1:67187735-67187754 None:intergenic 45.0%
CATCTCCGTCAACTCTATGT+GGG + Chr1:67186878-67186897 MsG0180003710.01.T01:intron 45.0%
CCATGGCATGATCTTGAGAT+AGG + Chr1:67189345-67189364 MsG0180003710.01.T01:CDS 45.0%
CCTATCTCAAGATCATGCCA+TGG - Chr1:67189348-67189367 None:intergenic 45.0%
CGGATTTCAGCTAAACGATG+TGG - Chr1:67191417-67191436 None:intergenic 45.0%
CGGTGGCGTAAAAGAGAAAA+GGG - Chr1:67188290-67188309 None:intergenic 45.0%
CTTGTATGCAGACTACGTTG+TGG + Chr1:67191659-67191678 MsG0180003710.01.T01:CDS 45.0%
CTTGTTGAGGATGCAAAGGA+AGG - Chr1:67188162-67188181 None:intergenic 45.0%
GAAGGAGGATGCTTAAGTAG+AGG - Chr1:67188139-67188158 None:intergenic 45.0%
GCAGCATTATCCGCATATTC+CGG - Chr1:67186963-67186982 None:intergenic 45.0%
GCATGCTTAGGAACAGCAAA+TGG - Chr1:67190444-67190463 None:intergenic 45.0%
GCTTCAGGACCTACATTGTT+GGG - Chr1:67189491-67189510 None:intergenic 45.0%
GGAGAGAGAATACGGAAGTA+AGG - Chr1:67188228-67188247 None:intergenic 45.0%
GGGATAAACCCATAGTTGTG+AGG - Chr1:67190512-67190531 None:intergenic 45.0%
GGGTTAAGCGTTAAGCATGT+TGG + Chr1:67190098-67190117 MsG0180003710.01.T01:intron 45.0%
GTAGAACATTGGGCACGTAA+AGG - Chr1:67186224-67186243 None:intergenic 45.0%
GTCAAGTAATATGGGACGGA+GGG + Chr1:67187942-67187961 MsG0180003710.01.T01:intron 45.0%
GTCAAGTAATATGGGACGGA+GGG - Chr1:67187961-67187942 None:intergenic 45.0%
TAAGGGTAAAAAGCAGCACC+AGG + Chr1:67188836-67188855 MsG0180003710.01.T01:intron 45.0%
TCAACACGCATCCATTCAAC+AGG - Chr1:67190021-67190040 None:intergenic 45.0%
TGAATCGGAAACTGTCACTG+TGG + Chr1:67188586-67188605 MsG0180003710.01.T01:CDS 45.0%
TGTGCTTCCTCTTCAACTGT+CGG + Chr1:67188257-67188276 MsG0180003710.01.T01:CDS 45.0%
TTGAAGATCTTGGGAGCTTC+AGG - Chr1:67189506-67189525 None:intergenic 45.0%
! GTGCTGATGATCCTGAGTAT+AGG + Chr1:67191364-67191383 MsG0180003710.01.T01:CDS 45.0%
! TTGTTTGGGGTCTCAATTGG+TGG - Chr1:67189240-67189259 None:intergenic 45.0%
!! GGCGGTAGTATTGATGCATA+TGG + Chr1:67191691-67191710 MsG0180003710.01.T01:exon 45.0%
!! GTGGTTATGGAGCATTGAGA+CGG - Chr1:67188336-67188355 None:intergenic 45.0%
AAACGGATATTCCCCGACAG+AGG - Chr1:67186761-67186780 None:intergenic 50.0%
AATCGAAGCAAGCTCTTGCG+AGG + Chr1:67186246-67186265 MsG0180003710.01.T01:intron 50.0%
ACGGAGATGGCGTTCCTAAT+GGG - Chr1:67186867-67186886 None:intergenic 50.0%
ACGTTGTGGAGAGTTTGAGG+CGG + Chr1:67191673-67191692 MsG0180003710.01.T01:CDS 50.0%
AGAAAGCAGCCAGGAAGAAC+TGG - Chr1:67191189-67191208 None:intergenic 50.0%
AGTCATGGATGCCAACCTCA+AGG + Chr1:67186395-67186414 MsG0180003710.01.T01:intron 50.0%
ATCGAAGCAAGCTCTTGCGA+GGG + Chr1:67186247-67186266 MsG0180003710.01.T01:intron 50.0%
CAAAGGCAGATGAGGAAGGA+AGG - Chr1:67191497-67191516 None:intergenic 50.0%
CACCACCACCTCTTAATGAG+AGG + Chr1:67189283-67189302 MsG0180003710.01.T01:CDS 50.0%
CATCCTCACAAATAGTGCGG+GGG - Chr1:67190532-67190551 None:intergenic 50.0%
CCACATAGAGTTGACGGAGA+TGG - Chr1:67186880-67186899 None:intergenic 50.0%
CCATCCTCACAAATAGTGCG+GGG - Chr1:67190533-67190552 None:intergenic 50.0%
CCATCTCCGTCAACTCTATG+TGG + Chr1:67186877-67186896 MsG0180003710.01.T01:intron 50.0%
GAAGCTGAGCTGTAGCTGAT+TGG - Chr1:67186916-67186935 None:intergenic 50.0%
GCCAAATGTAGCAGTGTGCA+TGG - Chr1:67185853-67185872 None:intergenic 50.0%
GCCATGCACACTGCTACATT+TGG + Chr1:67185849-67185868 MsG0180003710.01.T01:CDS 50.0%
GCTTCAAAGGCAGATGAGGA+AGG - Chr1:67191501-67191520 None:intergenic 50.0%
GGAACCGTCCAAGTTGTGAT+TGG - Chr1:67190199-67190218 None:intergenic 50.0%
GGAGGATGCTTAAGTAGAGG+TGG - Chr1:67188136-67188155 None:intergenic 50.0%
GGATCAACGTCTCCACTGAT+CGG + Chr1:67186187-67186206 MsG0180003710.01.T01:intron 50.0%
GGTCAAGTAATATGGGACGG+AGG + Chr1:67187941-67187960 MsG0180003710.01.T01:intron 50.0%
GGTCAAGTAATATGGGACGG+AGG - Chr1:67187960-67187941 None:intergenic 50.0%
GGTTGGCATCCATGACTTCT+CGG - Chr1:67186392-67186411 None:intergenic 50.0%
GTAGCTGATTGGGTGTAACG+TGG - Chr1:67186905-67186924 None:intergenic 50.0%
GTGGACCCACATAGAGTTGA+CGG - Chr1:67186886-67186905 None:intergenic 50.0%
TATCCCCCGCACTATTTGTG+AGG + Chr1:67190526-67190545 MsG0180003710.01.T01:CDS 50.0%
TCGGAAACTGTCACTGTGGT+TGG + Chr1:67188590-67188609 MsG0180003710.01.T01:intron 50.0%
TCTGTCGGGGAATATCCGTT+TGG + Chr1:67186760-67186779 MsG0180003710.01.T01:intron 50.0%
TGAGGATGCAAAGGAAGGGA+AGG - Chr1:67188157-67188176 None:intergenic 50.0%
TGGTGACCCCATTGATGTCT+TGG + Chr1:67190550-67190569 MsG0180003710.01.T01:CDS 50.0%
TTCGCGGTGGGAATCTTGTT+TGG - Chr1:67189255-67189274 None:intergenic 50.0%
! AAACGCACCGACAGTTGAAG+AGG - Chr1:67188267-67188286 None:intergenic 50.0%
! AAGAGGAAGCACAGATCTCG+AGG - Chr1:67188250-67188269 None:intergenic 50.0%
! AGAGGAAGCACAGATCTCGA+GGG - Chr1:67188249-67188268 None:intergenic 50.0%
! CTCATTAAGAGGTGGTGGTG+AGG - Chr1:67189283-67189302 None:intergenic 50.0%
! GATGCGATGACTAGCCCTTA+AGG + Chr1:67186307-67186326 MsG0180003710.01.T01:intron 50.0%
! TCGCGGTGGGAATCTTGTTT+GGG - Chr1:67189254-67189273 None:intergenic 50.0%
! TGGTGGTGAGGTGTAATTCG+CGG - Chr1:67189271-67189290 None:intergenic 50.0%
!! AGGGCTAGTCATCGCATCAT+AGG - Chr1:67186305-67186324 None:intergenic 50.0%
!! GTTGTTTGGTGCCTTGAGGT+TGG - Chr1:67186409-67186428 None:intergenic 50.0%
AAGCAAGCTCTTGCGAGGGT+GGG + Chr1:67186251-67186270 MsG0180003710.01.T01:intron 55.0%
ATCAGATCCGCACCTCTGTC+GGG + Chr1:67186746-67186765 MsG0180003710.01.T01:intron 55.0%
ATTGCACCGCACGACCCATT+AGG + Chr1:67186850-67186869 MsG0180003710.01.T01:intron 55.0%
CAACAGGAGCCAGTTCTTCC+TGG + Chr1:67191177-67191196 MsG0180003710.01.T01:intron 55.0%
CATCAGATCCGCACCTCTGT+CGG + Chr1:67186745-67186764 MsG0180003710.01.T01:intron 55.0%
CCCCGCACTATTTGTGAGGA+TGG + Chr1:67190530-67190549 MsG0180003710.01.T01:CDS 55.0%
GACGGAGATGGCGTTCCTAA+TGG - Chr1:67186868-67186887 None:intergenic 55.0%
GATATTCCCCGACAGAGGTG+CGG - Chr1:67186756-67186775 None:intergenic 55.0%
GGATGCAAAGGAAGGGAAGG+AGG - Chr1:67188154-67188173 None:intergenic 55.0%
GGTGAGGTGTAATTCGCGGT+GGG - Chr1:67189267-67189286 None:intergenic 55.0%
TGGTGAGGTGTAATTCGCGG+TGG - Chr1:67189268-67189287 None:intergenic 55.0%
TTGGCACGAAGAAAGCAGCC+AGG - Chr1:67191198-67191217 None:intergenic 55.0%
! CGCGGTGGGAATCTTGTTTG+GGG - Chr1:67189253-67189272 None:intergenic 55.0%
AAGCTCTTGCGAGGGTGGGA+GGG + Chr1:67186255-67186274 MsG0180003710.01.T01:intron 60.0%
GAAGCAAGCTCTTGCGAGGG+TGG + Chr1:67186250-67186269 MsG0180003710.01.T01:intron 60.0%
GGGAGGGTCTCAGACTCCTA+TGG + Chr1:67186271-67186290 MsG0180003710.01.T01:intron 60.0%
GGTCTGTTGCTGCACACCCA+TGG + Chr1:67189328-67189347 MsG0180003710.01.T01:CDS 60.0%
GTGCTCACGCAACCGATCAG+TGG - Chr1:67186202-67186221 None:intergenic 60.0%
TCAGATCCGCACCTCTGTCG+GGG + Chr1:67186747-67186766 MsG0180003710.01.T01:intron 60.0%
! GGCGTTCCTAATGGGTCGTG+CGG - Chr1:67186859-67186878 None:intergenic 60.0%
CAAGCTCTTGCGAGGGTGGG+AGG + Chr1:67186254-67186273 MsG0180003710.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr1 gene 67185846 67191956 67185846 ID=MsG0180003710.01;Name=MsG0180003710.01
Chr1 mRNA 67185846 67191956 67185846 ID=MsG0180003710.01.T01;Parent=MsG0180003710.01;Name=MsG0180003710.01.T01;_AED=0.49;_eAED=0.50;_QI=0|0.8|0.72|1|1|1|11|258|328
Chr1 exon 67185846 67185878 67185846 ID=MsG0180003710.01.T01:exon:51538;Parent=MsG0180003710.01.T01
Chr1 exon 67188076 67188278 67188076 ID=MsG0180003710.01.T01:exon:51539;Parent=MsG0180003710.01.T01
Chr1 exon 67188574 67188607 67188574 ID=MsG0180003710.01.T01:exon:51540;Parent=MsG0180003710.01.T01
Chr1 exon 67188721 67188777 67188721 ID=MsG0180003710.01.T01:exon:51541;Parent=MsG0180003710.01.T01
Chr1 exon 67189222 67189366 67189222 ID=MsG0180003710.01.T01:exon:51542;Parent=MsG0180003710.01.T01
Chr1 exon 67189501 67189529 67189501 ID=MsG0180003710.01.T01:exon:51543;Parent=MsG0180003710.01.T01
Chr1 exon 67190329 67190394 67190329 ID=MsG0180003710.01.T01:exon:51544;Parent=MsG0180003710.01.T01
Chr1 exon 67190476 67190583 67190476 ID=MsG0180003710.01.T01:exon:51545;Parent=MsG0180003710.01.T01
Chr1 exon 67191183 67191248 67191183 ID=MsG0180003710.01.T01:exon:51546;Parent=MsG0180003710.01.T01
Chr1 exon 67191333 67191535 67191333 ID=MsG0180003710.01.T01:exon:51547;Parent=MsG0180003710.01.T01
Chr1 exon 67191656 67191956 67191656 ID=MsG0180003710.01.T01:exon:51548;Parent=MsG0180003710.01.T01
Chr1 CDS 67185846 67185878 67185846 ID=MsG0180003710.01.T01:cds;Parent=MsG0180003710.01.T01
Chr1 CDS 67188076 67188278 67188076 ID=MsG0180003710.01.T01:cds;Parent=MsG0180003710.01.T01
Chr1 CDS 67188574 67188607 67188574 ID=MsG0180003710.01.T01:cds;Parent=MsG0180003710.01.T01
Chr1 CDS 67188721 67188777 67188721 ID=MsG0180003710.01.T01:cds;Parent=MsG0180003710.01.T01
Chr1 CDS 67189222 67189366 67189222 ID=MsG0180003710.01.T01:cds;Parent=MsG0180003710.01.T01
Chr1 CDS 67189501 67189529 67189501 ID=MsG0180003710.01.T01:cds;Parent=MsG0180003710.01.T01
Chr1 CDS 67190329 67190394 67190329 ID=MsG0180003710.01.T01:cds;Parent=MsG0180003710.01.T01
Chr1 CDS 67190476 67190583 67190476 ID=MsG0180003710.01.T01:cds;Parent=MsG0180003710.01.T01
Chr1 CDS 67191183 67191248 67191183 ID=MsG0180003710.01.T01:cds;Parent=MsG0180003710.01.T01
Chr1 CDS 67191333 67191535 67191333 ID=MsG0180003710.01.T01:cds;Parent=MsG0180003710.01.T01
Chr1 CDS 67191656 67191698 67191656 ID=MsG0180003710.01.T01:cds;Parent=MsG0180003710.01.T01
Chr1 three_prime_UTR 67191699 67191956 67191699 ID=MsG0180003710.01.T01:three_prime_utr;Parent=MsG0180003710.01.T01
Gene Sequence

>MsG0180003710.01.T01

ATGGCCATGCACACTGCTACATTTGGCCATTTGAAAAGTGGAAGCGGGAATAGAACGCGTCGCTTACACCTCACTCACATTTTCCCATTTCCACCTCTACTTAAGCATCCTCCTTCCCTTCCTTTGCATCCTCAACAAGCAAAGCAACCATTCCATTCCATTTCATTCCTTCTTCACGTTTTCCTTACTTCCGTATTCTCTCTCCCTCGAGATCTGTGCTTCCTCTTCAACTGTCGGCTAATGGCTTCTGAATCGGAAACTGTCACTGTGGGTGTTTCTGAGGTACCACCAATTGCAGTTTCTGAAATCGTGATGAATGTTAATTTTGCTGAAGAAATGGCTCCACCAATTGAGACCCCAAACAAGATTCCCACCGCGAATTACACCTCACCACCACCTCTTAATGAGAGGATCCTTTCATCATTGACTAGGAGGTCTGTTGCTGCACACCCATGGCATGATCTTGAGATAGGTCCTGAAGCTCCCAAGATCTTCAATTGTGTGGTTGAAATTGGGAAAGGAAACAAGGTGAAATATGAACTTGACAAGAAAACTGGACTTATTAAGGTTGACCGGGTCCTTTACTCATCAGTTGTGTATCCTCACAACTATGGGTTTATCCCCCGCACTATTTGTGAGGATGGTGACCCCATTGATGTCTTGGTTATTATGCAGGAGCCAGTTCTTCCTGGCTGCTTTCTTCGTGCCAAAGCTATTGGTCTCATGCCTATGATTGATCAGGGTGAGAAAGATGACAAGATCATTGCTGTCTGTGCTGATGATCCTGAGTATAGGCATTACAATGATATCAAGGAGCTCCCTCCACATCGTTTAGCTGAAATCCGTCGCTTTTTTGAAGATTACAAGAAGAATGAGAACAAGGAAGTTGCAGTTAACGACTTCCTTCCTTCCTCATCTGCCTTTGAAGCTATTGAGCATTCCATGACCTTGTATGCAGACTACGTTGTGGAGAGTTTGAGGCGGTAG
Protein sequence

>MsG0180003710.01.T01

MAMHTATFGHLKSGSGNRTRRLHLTHIFPFPPLLKHPPSLPLHPQQAKQPFHSISFLLHVFLTSVFSLPRDLCFLFNCRLMASESETVTVGVSEVPPIAVSEIVMNVNFAEEMAPPIETPNKIPTANYTSPPPLNERILSSLTRRSVAAHPWHDLEIGPEAPKIFNCVVEIGKGNKVKYELDKKTGLIKVDRVLYSSVVYPHNYGFIPRTICEDGDPIDVLVIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPSSSAFEAIEHSMTLYADYVVESLRR*