AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180003901.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180003901.01.T04 MTR_1g070480 87.565 193 24 0 1 193 1 193 5.57e-111 315
MsG0180003901.01.T04 MTR_7g096220 53.297 182 84 1 11 191 18 199 1.83e-62 192
MsG0180003901.01.T04 MTR_3g012070 77.895 95 20 1 97 191 34 127 7.08e-34 119
MsG0180003901.01.T04 MTR_2g100260 45.205 146 74 2 30 170 35 179 1.03e-32 116
MsG0180003901.01.T04 MTR_1g080760 44.149 188 97 3 10 193 10 193 1.07e-30 111
MsG0180003901.01.T04 MTR_6g092690 37.195 164 97 2 11 168 11 174 1.99e-29 108
MsG0180003901.01.T04 MTR_4g014060 37.143 140 86 1 32 169 60 199 3.54e-28 105
MsG0180003901.01.T04 MTR_0562s0010 37.143 140 86 1 32 169 60 199 3.54e-28 105
MsG0180003901.01.T04 MTR_5g083490 33.163 196 111 2 6 181 8 203 4.77e-27 102
MsG0180003901.01.T04 MTR_2g100270 43.860 171 86 2 9 169 3 173 2.98e-24 94.4
MsG0180003901.01.T04 MTR_8g016150 37.576 165 95 1 7 163 2 166 1.92e-23 92.0
MsG0180003901.01.T04 MTR_1g093090 45.333 75 41 0 30 104 21 95 4.99e-15 70.1
MsG0180003901.01.T02 MTR_1g070480 85.149 202 21 1 1 202 1 193 1.35e-110 314
MsG0180003901.01.T02 MTR_7g096220 51.309 191 83 4 11 200 18 199 1.19e-59 186
MsG0180003901.01.T02 MTR_2g100260 41.667 180 96 4 7 179 2 179 2.02e-34 120
MsG0180003901.01.T02 MTR_3g012070 77.895 95 20 1 106 200 34 127 7.75e-34 119
MsG0180003901.01.T02 MTR_1g080760 46.012 163 83 2 41 202 35 193 1.94e-30 110
MsG0180003901.01.T02 MTR_6g092690 35.465 172 108 2 9 177 3 174 5.48e-30 110
MsG0180003901.01.T02 MTR_4g014060 37.143 140 86 1 41 178 60 199 3.71e-28 105
MsG0180003901.01.T02 MTR_0562s0010 37.143 140 86 1 41 178 60 199 3.71e-28 105
MsG0180003901.01.T02 MTR_5g083490 34.783 184 105 2 22 190 20 203 5.53e-27 102
MsG0180003901.01.T02 MTR_2g100270 45.930 172 90 2 9 178 3 173 9.90e-26 98.6
MsG0180003901.01.T02 MTR_8g016150 37.952 166 102 1 7 172 2 166 1.45e-24 95.5
MsG0180003901.01.T02 MTR_1g093090 45.333 75 41 0 39 113 21 95 4.95e-15 70.5
MsG0180003901.01.T03 MTR_1g070480 92.228 193 15 0 1 193 1 193 1.54e-118 334
MsG0180003901.01.T03 MTR_7g096220 56.284 183 77 3 11 191 18 199 1.18e-66 203
MsG0180003901.01.T03 MTR_2g100260 46.575 146 72 2 30 170 35 179 3.01e-37 127
MsG0180003901.01.T03 MTR_3g012070 81.053 95 17 1 97 191 34 127 1.48e-36 125
MsG0180003901.01.T03 MTR_1g080760 47.340 188 91 3 10 193 10 193 4.99e-35 122
MsG0180003901.01.T03 MTR_4g014060 42.553 141 79 1 31 169 59 199 3.05e-34 121
MsG0180003901.01.T03 MTR_0562s0010 42.553 141 79 1 31 169 59 199 3.05e-34 121
MsG0180003901.01.T03 MTR_5g083490 39.744 156 92 1 28 181 48 203 4.80e-33 117
MsG0180003901.01.T03 MTR_6g092690 39.474 152 91 1 18 168 23 174 4.63e-32 115
MsG0180003901.01.T03 MTR_2g100270 47.977 173 86 1 1 169 1 173 1.09e-31 113
MsG0180003901.01.T03 MTR_8g016150 39.394 165 92 1 7 163 2 166 1.11e-28 105
MsG0180003901.01.T03 MTR_1g093090 45.161 93 49 1 21 111 12 104 7.28e-20 82.8
MsG0180003901.01.T01 MTR_1g070480 82.990 194 30 1 11 204 3 193 1.24e-102 294
MsG0180003901.01.T01 MTR_7g096220 52.486 181 85 1 23 202 19 199 6.86e-60 186
MsG0180003901.01.T01 MTR_3g012070 77.895 95 20 1 108 202 34 127 8.52e-34 119
MsG0180003901.01.T01 MTR_2g100260 45.205 146 74 2 41 181 35 179 6.32e-33 117
MsG0180003901.01.T01 MTR_1g080760 46.012 163 83 2 43 204 35 193 1.76e-30 111
MsG0180003901.01.T01 MTR_6g092690 36.747 166 102 2 17 179 9 174 8.28e-30 109
MsG0180003901.01.T01 MTR_4g014060 37.143 140 86 1 43 180 60 199 4.71e-28 105
MsG0180003901.01.T01 MTR_0562s0010 37.143 140 86 1 43 180 60 199 4.71e-28 105
MsG0180003901.01.T01 MTR_5g083490 37.500 152 93 1 43 192 52 203 3.61e-26 100
MsG0180003901.01.T01 MTR_2g100270 45.783 166 89 1 16 180 8 173 1.88e-25 97.8
MsG0180003901.01.T01 MTR_8g016150 41.791 134 78 0 41 174 33 166 2.31e-21 87.0
MsG0180003901.01.T01 MTR_1g093090 45.333 75 41 0 41 115 21 95 5.34e-15 70.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180003901.01.T04 AT1G04260 40.909 176 104 0 18 193 7 182 1.29e-43 144
MsG0180003901.01.T04 AT1G55190 48.951 143 73 0 26 168 31 173 1.36e-37 129
MsG0180003901.01.T04 AT3G13710 41.566 166 83 1 17 168 8 173 1.81e-35 123
MsG0180003901.01.T04 AT1G08770 40.113 177 102 2 17 191 33 207 7.38e-32 114
MsG0180003901.01.T04 AT3G13720 44.444 144 80 0 25 168 30 173 7.89e-31 111
MsG0180003901.01.T04 AT5G01640 39.073 151 90 1 32 180 55 205 3.80e-29 108
MsG0180003901.01.T04 AT2G38360 32.895 152 100 1 32 181 55 206 1.56e-26 101
MsG0180003901.01.T04 AT2G40380 39.735 151 89 1 32 180 47 197 2.95e-26 100
MsG0180003901.01.T04 AT3G56110 37.838 148 90 1 32 177 45 192 6.44e-24 94.4
MsG0180003901.01.T04 AT3G56110 37.838 148 90 1 32 177 45 192 6.44e-24 94.4
MsG0180003901.01.T04 AT3G56110 37.838 148 90 1 32 177 45 192 6.44e-24 94.4
MsG0180003901.01.T04 AT3G56110 37.838 148 90 1 32 177 45 192 6.44e-24 94.4
MsG0180003901.01.T04 AT5G56230 34.104 173 109 3 6 177 14 182 5.04e-23 91.3
MsG0180003901.01.T04 AT1G17700 39.583 144 87 0 26 169 31 174 6.22e-23 90.9
MsG0180003901.01.T04 AT5G05380 39.189 148 88 1 32 177 48 195 4.54e-22 89.7
MsG0180003901.01.T04 AT5G05380 39.189 148 88 1 32 177 91 238 1.04e-21 89.7
MsG0180003901.01.T04 AT5G05380 39.189 148 88 1 32 177 99 246 1.16e-21 89.7
MsG0180003901.01.T04 AT5G05380 39.189 148 88 1 32 177 115 262 1.64e-21 89.4
MsG0180003901.01.T04 AT5G07110 33.333 147 96 1 31 175 44 190 1.71e-21 88.2
MsG0180003901.01.T04 AT1G55640 29.286 140 98 1 32 170 38 177 1.14e-14 69.3
MsG0180003901.01.T04 AT4G29658 28.571 175 112 3 9 170 3 177 4.07e-12 62.4
MsG0180003901.01.T02 AT1G04260 40.909 176 104 0 27 202 7 182 2.11e-43 144
MsG0180003901.01.T02 AT1G55190 44.706 170 92 1 10 177 4 173 3.35e-38 130
MsG0180003901.01.T02 AT3G13710 40.828 169 98 1 11 177 5 173 1.10e-36 127
MsG0180003901.01.T02 AT1G08770 39.894 188 109 2 15 200 22 207 9.51e-33 117
MsG0180003901.01.T02 AT3G13720 41.765 170 97 2 10 177 4 173 3.09e-32 115
MsG0180003901.01.T02 AT5G01640 39.073 151 90 1 41 189 55 205 3.99e-29 108
MsG0180003901.01.T02 AT2G38360 32.895 152 100 1 41 190 55 206 1.48e-26 101
MsG0180003901.01.T02 AT2G40380 39.735 151 89 1 41 189 47 197 3.56e-26 100
MsG0180003901.01.T02 AT3G56110 37.838 148 90 1 41 186 45 192 8.37e-24 94.4
MsG0180003901.01.T02 AT3G56110 37.838 148 90 1 41 186 45 192 8.37e-24 94.4
MsG0180003901.01.T02 AT3G56110 37.838 148 90 1 41 186 45 192 8.37e-24 94.4
MsG0180003901.01.T02 AT3G56110 37.838 148 90 1 41 186 45 192 8.37e-24 94.4
MsG0180003901.01.T02 AT1G17700 35.714 168 108 0 11 178 7 174 6.93e-23 90.9
MsG0180003901.01.T02 AT5G56230 34.694 147 95 1 41 186 36 182 8.59e-23 90.9
MsG0180003901.01.T02 AT5G05380 39.189 148 88 1 41 186 48 195 5.92e-22 89.7
MsG0180003901.01.T02 AT5G05380 39.189 148 88 1 41 186 99 246 1.09e-21 90.1
MsG0180003901.01.T02 AT5G05380 39.189 148 88 1 41 186 91 238 1.14e-21 89.7
MsG0180003901.01.T02 AT5G05380 39.189 148 88 1 41 186 115 262 1.94e-21 89.7
MsG0180003901.01.T02 AT5G07110 33.333 147 96 1 40 184 44 190 2.25e-21 88.2
MsG0180003901.01.T02 AT1G55640 29.286 140 98 1 41 179 38 177 1.95e-14 68.9
MsG0180003901.01.T02 AT4G29658 27.429 175 123 1 9 179 3 177 2.86e-13 65.9
MsG0180003901.01.T03 AT1G04260 42.614 176 101 0 18 193 7 182 6.74e-45 147
MsG0180003901.01.T03 AT1G55190 53.147 143 67 0 26 168 31 173 3.59e-44 145
MsG0180003901.01.T03 AT3G13710 42.515 167 94 1 2 168 9 173 9.58e-41 137
MsG0180003901.01.T03 AT1G08770 45.198 177 93 2 17 191 33 207 2.30e-38 131
MsG0180003901.01.T03 AT3G13720 42.353 170 87 2 10 168 4 173 4.75e-36 125
MsG0180003901.01.T03 AT5G01640 39.735 151 89 1 32 180 55 205 2.19e-32 116
MsG0180003901.01.T03 AT2G38360 36.601 153 95 1 31 181 54 206 6.75e-32 115
MsG0180003901.01.T03 AT2G40380 42.105 152 86 1 31 180 46 197 1.41e-30 111
MsG0180003901.01.T03 AT3G56110 40.940 149 86 1 31 177 44 192 1.03e-27 103
MsG0180003901.01.T03 AT3G56110 40.940 149 86 1 31 177 44 192 1.03e-27 103
MsG0180003901.01.T03 AT3G56110 40.940 149 86 1 31 177 44 192 1.03e-27 103
MsG0180003901.01.T03 AT3G56110 40.940 149 86 1 31 177 44 192 1.03e-27 103
MsG0180003901.01.T03 AT1G17700 40.278 144 86 0 26 169 31 174 7.08e-27 101
MsG0180003901.01.T03 AT5G56230 33.516 182 116 2 1 177 1 182 1.36e-26 100
MsG0180003901.01.T03 AT5G05380 42.282 149 84 1 31 177 47 195 1.94e-26 100
MsG0180003901.01.T03 AT5G07110 37.671 146 89 1 32 175 45 190 2.28e-26 100
MsG0180003901.01.T03 AT5G05380 42.282 149 84 1 31 177 90 238 3.93e-26 101
MsG0180003901.01.T03 AT5G05380 42.282 149 84 1 31 177 98 246 4.54e-26 101
MsG0180003901.01.T03 AT5G05380 42.282 149 84 1 31 177 114 262 6.94e-26 101
MsG0180003901.01.T03 AT4G29658 30.286 175 109 2 9 170 3 177 7.38e-17 75.1
MsG0180003901.01.T03 AT1G55640 30.986 142 97 1 30 170 36 177 1.02e-16 74.7
MsG0180003901.01.T03 AT4G00005 34.188 117 70 2 55 169 3 114 2.00e-11 58.9
MsG0180003901.01.T01 AT1G04260 40.909 176 104 0 29 204 7 182 3.80e-43 143
MsG0180003901.01.T01 AT1G55190 46.341 164 87 1 17 179 10 173 3.17e-38 130
MsG0180003901.01.T01 AT3G13710 41.916 167 96 1 14 179 7 173 1.04e-36 127
MsG0180003901.01.T01 AT1G08770 40.212 189 107 3 18 202 21 207 2.19e-32 116
MsG0180003901.01.T01 AT3G13720 42.683 164 93 1 17 179 10 173 6.54e-32 114
MsG0180003901.01.T01 AT5G01640 39.073 151 90 1 43 191 55 205 1.27e-28 107
MsG0180003901.01.T01 AT2G38360 31.217 189 114 3 19 192 19 206 1.87e-26 101
MsG0180003901.01.T01 AT2G40380 39.735 151 89 1 43 191 47 197 6.42e-26 99.8
MsG0180003901.01.T01 AT3G56110 37.838 148 90 1 43 188 45 192 1.76e-23 93.6
MsG0180003901.01.T01 AT3G56110 37.838 148 90 1 43 188 45 192 1.76e-23 93.6
MsG0180003901.01.T01 AT3G56110 37.838 148 90 1 43 188 45 192 1.76e-23 93.6
MsG0180003901.01.T01 AT3G56110 37.838 148 90 1 43 188 45 192 1.76e-23 93.6
MsG0180003901.01.T01 AT1G17700 39.583 144 87 0 37 180 31 174 1.37e-22 90.5
MsG0180003901.01.T01 AT5G56230 34.694 147 95 1 43 188 36 182 1.66e-22 90.1
MsG0180003901.01.T01 AT5G05380 39.189 148 88 1 43 188 48 195 5.16e-22 89.7
MsG0180003901.01.T01 AT5G05380 39.189 148 88 1 43 188 99 246 1.36e-21 89.7
MsG0180003901.01.T01 AT5G05380 39.189 148 88 1 43 188 91 238 1.39e-21 89.7
MsG0180003901.01.T01 AT5G05380 39.189 148 88 1 43 188 115 262 2.34e-21 89.4
MsG0180003901.01.T01 AT5G07110 33.333 147 96 1 42 186 44 190 3.89e-21 87.4
MsG0180003901.01.T01 AT1G55640 29.286 140 98 1 43 181 38 177 1.97e-14 68.9
MsG0180003901.01.T01 AT4G29658 30.769 143 95 1 43 181 35 177 5.95e-12 62.4

Find 138 sgRNAs with CRISPR-Local

Find 432 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTGGTTTCGGAGAGGGAGTG+GGG 0.272856 1:-69862250 None:intergenic
GATGAAGAAGAGATCTTTGA+TGG 0.279860 1:+69862610 MsG0180003901.01.T01:intron
GATGAAGAAGAGATCTTTGA+TGG 0.279860 1:+69867692 MsG0180003901.01.T01:CDS
GTAAGTTGGAGTAGGATTAA+TGG 0.302615 1:-69862122 None:intergenic
TTGGAAGGTGGGGTGGCGCG+TGG 0.324938 1:-69867254 None:intergenic
GGGTGGTTTCGGAGAGGGAG+TGG 0.353712 1:-69862252 None:intergenic
GGTGATTTGCTTTCAGTTGT+TGG 0.353754 1:+69862631 MsG0180003901.01.T01:intron
GGTGATTTGCTTTCAGTTGT+TGG 0.353754 1:+69867713 MsG0180003901.01.T01:CDS
GAAGGGAGAGAGTTGTAAGT+TGG 0.355663 1:-69867218 None:intergenic
GTGAGGATGAGTGAAGGATT+GGG 0.361564 1:-69867315 None:intergenic
TCCTCGCCGTCTTCGCCGCT+TGG 0.362575 1:+69867462 MsG0180003901.01.T01:CDS
AGTGAGGATGAGTGAAGGAT+TGG 0.368971 1:-69867316 None:intergenic
AGCTTCAATACCAAGCGAAC+AGG 0.373632 1:+69862658 MsG0180003901.01.T01:intron
CGGCGCGTGGGGTAGTTAGA+AGG 0.374290 1:-69862187 None:intergenic
GGAAGGTGGGGTGGCGCGTG+GGG 0.374482 1:-69867252 None:intergenic
CACGTGGGGTAGTTGGAAGG+TGG 0.376357 1:-69867266 None:intergenic
GTAAGTTGGAGTGGGATAGA+TGG 0.383602 1:-69867204 None:intergenic
GATAGAGAAGGCTGAGGAAG+AGG 0.386753 1:-69862336 None:intergenic
AGCTTCAATACCAAGCGAAC+GGG 0.394063 1:+69867740 MsG0180003901.01.T01:CDS
CGCTTGTCTTCACCGGTGTC+TGG 0.394310 1:+69862503 MsG0180003901.01.T01:intron
CGCTCGTCTTCACCGGCGTC+TGG 0.396795 1:+69867585 MsG0180003901.01.T01:CDS
GGTGGTTTCGGAGAGGGAGT+GGG 0.403250 1:-69862251 None:intergenic
TCATCGCCGTCTTCGCCGCT+TGG 0.407986 1:+69862380 MsG0180003901.01.T01:CDS
TGGTTTCGGAGAGGGAGTGG+GGG 0.418255 1:-69862249 None:intergenic
GAAGAACCAAGCGGCGAAGA+CGG 0.427174 1:-69862386 None:intergenic
GAAGAACCAAGCGGCGAAGA+CGG 0.427174 1:-69867468 None:intergenic
GAAGGGAGAGAGTTGTAAGT+TGG 0.427544 1:-69862136 None:intergenic
GGGGTAGTTGGAAGGTGGGG+TGG 0.436768 1:-69867261 None:intergenic
GGCTGAGGAAGAGGATGAAG+AGG 0.439094 1:-69862327 None:intergenic
CTCATCGGTGCTGCGGTGGT+TGG 0.441084 1:+69862547 MsG0180003901.01.T01:intron
TGGGCGGCACGTGGGGTAGT+TGG 0.449041 1:-69867273 None:intergenic
CTTCTTCTTCAGTGACCACC+TGG 0.451935 1:+69867493 MsG0180003901.01.T01:CDS
TGAGGGAGAGAGGGTGGTAG+CGG 0.452355 1:-69867433 None:intergenic
AGAGAGTTGTAAGTTGGAGT+AGG 0.455001 1:-69862130 None:intergenic
AGGAAGACGATGAGGGAGAG+AGG 0.457920 1:-69867443 None:intergenic
GAGGGTGGTAGCGGAGGCTG+AGG 0.461609 1:-69867424 None:intergenic
TGGAAGGTGGGGTGGCGCGT+GGG 0.467570 1:-69867253 None:intergenic
AGAGGACGACGGGGCGGTCA+CGG 0.468542 1:-69862420 None:intergenic
ACGGAGGGTGGTTTCGGAGA+GGG 0.477533 1:-69862257 None:intergenic
ACGGAGGGTGGTTTCGGAGA+GGG 0.477533 1:-69867339 None:intergenic
CGTGGGGAAGTTGAGTTTGA+AGG 0.477570 1:-69867236 None:intergenic
GGTAGCGGAGGCTGAGGAAG+AGG 0.477985 1:-69867418 None:intergenic
CGTGGGGTAGTTGGAAGGTG+GGG 0.481724 1:-69867264 None:intergenic
GTCCTCGTGTCGGTGCTCTT+CGG 0.484352 1:+69867614 MsG0180003901.01.T01:CDS
GTGGTTTCGGAGAGGGAGTG+AGG 0.487174 1:-69867332 None:intergenic
ATGAAGACGATGAGGGAGAG+AGG 0.487841 1:-69862361 None:intergenic
CGTGGAGAAGTTGAGGTTGA+AGG 0.492708 1:-69862154 None:intergenic
TTGGTTTGCATGCGGCGTTT+CGG 0.494153 1:+69862566 MsG0180003901.01.T01:intron
GAGAGAGTTGTAAGTTGGAG+TGG 0.502950 1:-69867213 None:intergenic
AGTTGATGCGGAAGTGGTTG+AGG 0.503368 1:-69862291 None:intergenic
AGTTGATGCGGAAGTGGTTG+AGG 0.503368 1:-69867373 None:intergenic
AGACGATGAGGGAGAGAGGG+TGG 0.503783 1:-69867439 None:intergenic
GTCGTCGCGCTCGTCTTCAC+CGG 0.504856 1:+69867578 MsG0180003901.01.T01:CDS
GAGGGTGATAGAGAAGGCTG+AGG 0.506859 1:-69862342 None:intergenic
ACGTGGGGTAGTTGGAAGGT+GGG 0.508307 1:-69867265 None:intergenic
TGAGGATGAGTGAAGGATTG+GGG 0.510390 1:-69867314 None:intergenic
TCTAGTGTACCCTGTTCGCT+TGG 0.513257 1:-69862668 None:intergenic
TTTGCCATGGGCGGCACGTG+GGG 0.513786 1:-69867280 None:intergenic
AGAGAGTTGTAAGTTGGAGT+GGG 0.514057 1:-69867212 None:intergenic
TGTCGATGGTGAAACGGAAG+AGG 0.515612 1:-69867520 None:intergenic
GGAGGCTGAGGAAGAGGATG+AGG 0.518385 1:-69867412 None:intergenic
AGAGTAGGACGAGGAGGAAG+CGG 0.519171 1:-69862462 None:intergenic
GAGGAGGAAGCGGTCGTCAA+TGG 0.519538 1:-69862452 None:intergenic
GAGGATGAGGAGGATGATGA+TGG 0.521356 1:-69867399 None:intergenic
AGAGTAGAATGAGGAGGAAG+CGG 0.522523 1:-69867544 None:intergenic
TTTGCCATGGGCGGCGCGTG+GGG 0.523136 1:-69862198 None:intergenic
GGGAGAGAGGGTGGTAGCGG+AGG 0.523307 1:-69867430 None:intergenic
GTCGTCGCGCTTGTCTTCAC+CGG 0.523765 1:+69862496 MsG0180003901.01.T01:intron
AGCGGTTGTCGATGGTGAAA+CGG 0.524582 1:-69867526 None:intergenic
TCTAGTGTACCCCGTTCGCT+TGG 0.526290 1:-69867750 None:intergenic
GTGAAACGGAAGAGGACGAC+GGG 0.529191 1:-69862430 None:intergenic
CGGCACGTGGGGTAGTTGGA+AGG 0.532393 1:-69867269 None:intergenic
GAGGGAGTGAGGATGAGTGA+AGG 0.534577 1:-69867321 None:intergenic
GGGAGAGAGGGTGATAGAGA+AGG 0.537298 1:-69862348 None:intergenic
GTCCTCGTGTCGGTGCTCAT+CGG 0.543693 1:+69862532 MsG0180003901.01.T01:intron
AAGCGCGACGACGGTGAGGG+CGG 0.549919 1:-69862485 None:intergenic
GTGGAGAAGTTGAGGTTGAA+GGG 0.551495 1:-69862153 None:intergenic
CGTCAATGGTGAAACGGAAG+AGG 0.553573 1:-69862438 None:intergenic
GGCTGAGGAAGAGGATGAGG+AGG 0.555428 1:-69867409 None:intergenic
ACTACCCCACGCGCCGCCCA+TGG 0.558256 1:+69862194 MsG0180003901.01.T02:intron
GTGGGGAAGTTGAGTTTGAA+GGG 0.558559 1:-69867235 None:intergenic
ACTACCCCACGTGCCGCCCA+TGG 0.561155 1:+69867276 MsG0180003901.01.T01:CDS
AGCGGTCGTCAATGGTGAAA+CGG 0.561981 1:-69862444 None:intergenic
GTCGGTGCTCTTCGGTGCTG+CGG 0.562357 1:+69867622 MsG0180003901.01.T01:CDS
GAGGAGGAAGCGGTTGTCGA+TGG 0.562502 1:-69867534 None:intergenic
CGACGGTGAGGGCGGAGAGT+AGG 0.563298 1:-69862477 None:intergenic
GGCGGTCACGGAAGAAGAAG+AGG 0.566501 1:-69862408 None:intergenic
TGGCGTAGTTGATGCGGAAG+TGG 0.571659 1:-69862297 None:intergenic
CTGGCTTAACGTCCTCGTGT+CGG 0.579627 1:+69867604 MsG0180003901.01.T01:CDS
GGTGGTCACTGAAGAAGAAG+AGG 0.581883 1:-69867490 None:intergenic
GGTGCTCTTCGGTGCTGCGG+TGG 0.582059 1:+69867625 MsG0180003901.01.T01:CDS
TGGCGTAGTTGATGCGGAAG+TGG 0.582115 1:-69867379 None:intergenic
GAAGAGGATGAAGAGGATGA+TGG 0.590206 1:-69862320 None:intergenic
CTGGCTTAACGTCCTCGTGT+CGG 0.592061 1:+69862522 MsG0180003901.01.T01:intron
TTAGAAGGTGTGGTGGCGCG+TGG 0.595422 1:-69862172 None:intergenic
GGAAGACGATGAGGGAGAGA+GGG 0.595788 1:-69867442 None:intergenic
CACCGATGAGCACCGACACG+AGG 0.597222 1:-69862534 None:intergenic
GGGCAGAGAGTAGAATGAGG+AGG 0.599319 1:-69867550 None:intergenic
GAGGATGAAGAGGATGATGG+TGG 0.601480 1:-69862317 None:intergenic
GACAAGCGCGACGACGGTGA+GGG 0.602736 1:-69862488 None:intergenic
CACCGAAGAGCACCGACACG+AGG 0.603948 1:-69867616 None:intergenic
TAGCTTCAATACCAAGCGAA+CGG 0.609099 1:+69867739 MsG0180003901.01.T01:CDS
GACGAGCGCGACGACTGTGA+GGG 0.612183 1:-69867570 None:intergenic
ACCAAGCGGCGAAGACGGCG+AGG 0.613183 1:-69867463 None:intergenic
TACGGAGGGTGGTTTCGGAG+AGG 0.616601 1:-69862258 None:intergenic
TACGGAGGGTGGTTTCGGAG+AGG 0.616601 1:-69867340 None:intergenic
CGTGGGGTAGTTAGAAGGTG+TGG 0.616638 1:-69862182 None:intergenic
TGAGGGCAGAGAGTAGAATG+AGG 0.616996 1:-69867553 None:intergenic
TGAAACGGAAGAGGATGACC+AGG 0.620279 1:-69867511 None:intergenic
GGTGCTCATCGGTGCTGCGG+TGG 0.621215 1:+69862543 MsG0180003901.01.T01:intron
TGAAGACGATGAGGGAGAGA+GGG 0.624059 1:-69862360 None:intergenic
GTCGGTGCTCATCGGTGCTG+CGG 0.626659 1:+69862540 MsG0180003901.01.T01:intron
GGTGAAGACAAGCGCGACGA+CGG 0.628573 1:-69862494 None:intergenic
GGGGTAGTTAGAAGGTGTGG+TGG 0.628633 1:-69862179 None:intergenic
TGCGGTGGTTGGTTTGCATG+CGG 0.632195 1:+69862558 MsG0180003901.01.T01:intron
AGACGGCGAGGAAGACGATG+AGG 0.634290 1:-69867451 None:intergenic
GATTTGCTTTCAGTTGTTGG+TGG 0.638304 1:+69862634 MsG0180003901.01.T01:intron
GATTTGCTTTCAGTTGTTGG+TGG 0.638304 1:+69867716 MsG0180003901.01.T01:CDS
GACGGCGAGGAAGACGATGA+GGG 0.639915 1:-69867450 None:intergenic
GCTTCAATACCAAGCGAACA+GGG 0.643569 1:+69862659 MsG0180003901.01.T01:intron
GGGCGGAGAGTAGGACGAGG+AGG 0.649539 1:-69862468 None:intergenic
AGACGGCGATGAAGACGATG+AGG 0.651741 1:-69862369 None:intergenic
GACGGCGATGAAGACGATGA+GGG 0.660143 1:-69862368 None:intergenic
TGAGGGCGGAGAGTAGGACG+AGG 0.661210 1:-69862471 None:intergenic
AGACAAGCGCGACGACGGTG+AGG 0.665725 1:-69862489 None:intergenic
GGTGGCGCGTGGAGAAGTTG+AGG 0.666671 1:-69862161 None:intergenic
AGACGAGCGCGACGACTGTG+AGG 0.675858 1:-69867571 None:intergenic
TGATGGTGGCGTAGTTGATG+CGG 0.679858 1:-69862303 None:intergenic
TGATGATGGCGTAGTTGATG+CGG 0.679858 1:-69867385 None:intergenic
GAAGAAGAGGAAGAACCAAG+CGG 0.686040 1:-69862395 None:intergenic
GGTGAAACGGAAGAGGACGA+CGG 0.689860 1:-69862431 None:intergenic
GCTTCAATACCAAGCGAACG+GGG 0.692098 1:+69867741 MsG0180003901.01.T01:CDS
AACGGAAGAGGACGACGGGG+CGG 0.698930 1:-69862426 None:intergenic
GAAGAAGAGGAAGAACCAAG+CGG 0.718591 1:-69867477 None:intergenic
GAGGACGTTAAGCCAGACGC+CGG 0.719336 1:-69867597 None:intergenic
GAGGACGTTAAGCCAGACAC+CGG 0.725574 1:-69862515 None:intergenic
TGAAACGGAAGAGGACGACG+GGG 0.728591 1:-69862429 None:intergenic
AACGGAAGAGGATGACCAGG+TGG 0.730030 1:-69867508 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATATTATCATTATATCTT+AGG - Chr1:69864926-69864945 None:intergenic 10.0%
!! TTAAAATACTATTAAATCTA+TGG - Chr1:69865321-69865340 None:intergenic 10.0%
!!! AGATTTAATAGTATTTTAAT+TGG + Chr1:69865322-69865341 MsG0180003901.01.T01:intron 10.0%
!!! TTATTTTTATAAACTTGTTA+GGG + Chr1:69863460-69863479 MsG0180003901.01.T01:intron 10.0%
!!! TTTATTTTTATAAACTTGTT+AGG + Chr1:69863459-69863478 MsG0180003901.01.T01:intron 10.0%
!!! TTTTTTAGATTAGATTATTT+TGG + Chr1:69863832-69863851 MsG0180003901.01.T01:intron 10.0%
!! ATAAACTGAAAATAGTTTAT+AGG - Chr1:69863444-69863463 None:intergenic 15.0%
!! CAAAAAATAAAAAACAATGT+AGG - Chr1:69863679-69863698 None:intergenic 15.0%
!! CTTAAATTTATCACTAAAAA+GGG - Chr1:69863706-69863725 None:intergenic 15.0%
!! TAAACTGAAAATAGTTTATA+GGG - Chr1:69863443-69863462 None:intergenic 15.0%
!! TAAATATCGAAGATATATTA+GGG - Chr1:69864000-69864019 None:intergenic 15.0%
!! TAAATTGTTCAAACAATAAT+AGG + Chr1:69866615-69866634 MsG0180003901.01.T01:intron 15.0%
!! TAATTAGAACTGAAAAAATT+TGG + Chr1:69866670-69866689 MsG0180003901.01.T01:intron 15.0%
!! TACAAATAGAAATAGAAATA+GGG + Chr1:69867152-69867171 MsG0180003901.01.T01:intron 15.0%
!! TCTTAAATTTATCACTAAAA+AGG - Chr1:69863707-69863726 None:intergenic 15.0%
!! TTTGCAAAACTAAAAAAAAT+TGG + Chr1:69866705-69866724 MsG0180003901.01.T01:intron 15.0%
!!! AAAAAAAAGAAGATAGATTT+TGG + Chr1:69863242-69863261 MsG0180003901.01.T01:intron 15.0%
!!! AAAGAAGCTTTTTTTTTTTT+AGG - Chr1:69865580-69865599 None:intergenic 15.0%
!!! AACATTTCACATTTTTATTT+TGG - Chr1:69862842-69862861 None:intergenic 15.0%
!!! TATTATTTTAATTCATAGGT+GGG - Chr1:69865417-69865436 None:intergenic 15.0%
!!! TGTTATTTGAGTTTATTTAT+TGG + Chr1:69863364-69863383 MsG0180003901.01.T01:intron 15.0%
!!! TTAATAGTATTTTAATTGGA+TGG + Chr1:69865326-69865345 MsG0180003901.01.T01:intron 15.0%
!!! TTATTATTTTAATTCATAGG+TGG - Chr1:69865418-69865437 None:intergenic 15.0%
!!! TTATTTCTTAGTTTTTGATT+GGG + Chr1:69863040-69863059 MsG0180003901.01.T01:intron 15.0%
!!! TTTAGCTTTTAATAAAAGAA+AGG - Chr1:69864229-69864248 None:intergenic 15.0%
!!! TTTATTTCTTAGTTTTTGAT+TGG + Chr1:69863039-69863058 MsG0180003901.01.T01:intron 15.0%
!!! TTTTTTTTTGATGAATAACA+TGG - Chr1:69865724-69865743 None:intergenic 15.0%
!! AAAATAAAAAACAATGTAGG+AGG - Chr1:69863676-69863695 None:intergenic 20.0%
!! CAAAATTGTTAACAGAATTT+AGG - Chr1:69867033-69867052 None:intergenic 20.0%
!! CTAAATATCGAAGATATATT+AGG - Chr1:69864001-69864020 None:intergenic 20.0%
!! CTACAAATAGAAATAGAAAT+AGG + Chr1:69867151-69867170 MsG0180003901.01.T01:intron 20.0%
!! TATTAAATCTATGGCTATAA+AGG - Chr1:69865312-69865331 None:intergenic 20.0%
!!! AAATTTTAGACTATTCTTGA+AGG + Chr1:69866749-69866768 MsG0180003901.01.T01:intron 20.0%
!!! AAATTTTCCAAACTTTTGTA+AGG - Chr1:69866735-69866754 None:intergenic 20.0%
!!! AAGAAAACAAAATCTTTTGA+TGG - Chr1:69866425-69866444 None:intergenic 20.0%
!!! AAGAAGTTTATTTTTCTGAA+AGG - Chr1:69865554-69865573 None:intergenic 20.0%
!!! AATGAGGTTTTATTTTCAAT+TGG - Chr1:69865812-69865831 None:intergenic 20.0%
!!! ACAGATTTTCAACATAATTA+TGG + Chr1:69865087-69865106 MsG0180003901.01.T01:intron 20.0%
!!! ACTTATATATTACTAGTTTC+AGG + Chr1:69866390-69866409 MsG0180003901.01.T01:intron 20.0%
!!! ATACGATTTTGCATTTAAAA+CGG - Chr1:69865915-69865934 None:intergenic 20.0%
!!! ATCTAGATATTCTAAAGATA+TGG + Chr1:69864954-69864973 MsG0180003901.01.T01:intron 20.0%
!!! ATGAGGTTTTATTTTCAATT+GGG - Chr1:69865811-69865830 None:intergenic 20.0%
!!! ATTATTTTAATTCATAGGTG+GGG - Chr1:69865416-69865435 None:intergenic 20.0%
!!! CTTATATATTACTAGTTTCA+GGG + Chr1:69866391-69866410 MsG0180003901.01.T01:intron 20.0%
!!! GCATATGTTTTTTTTTTTTG+TGG - Chr1:69866586-69866605 None:intergenic 20.0%
!!! TATGTTTTTTTTTTTTGTGG+TGG - Chr1:69866583-69866602 None:intergenic 20.0%
!!! TTTTAGTTTTGCAAAAAAGA+AGG - Chr1:69866700-69866719 None:intergenic 20.0%
! AAATAGCGGTTATAAAGTAA+CGG + Chr1:69864287-69864306 MsG0180003901.01.T01:intron 25.0%
! AACAATGCATAATATATGCA+AGG + Chr1:69866539-69866558 MsG0180003901.01.T01:intron 25.0%
! AATAAAAGAAAGGTTATACC+AGG - Chr1:69864219-69864238 None:intergenic 25.0%
! ACTACAACAAATTATGATGT+AGG + Chr1:69866795-69866814 MsG0180003901.01.T01:intron 25.0%
! AGCGAAATTTCAAAATATTG+GGG - Chr1:69865874-69865893 None:intergenic 25.0%
! ATGAAGAATGAGAATTTCAT+TGG + Chr1:69866027-69866046 MsG0180003901.01.T01:intron 25.0%
! ATTATGGAAAAAGTGAAACA+AGG + Chr1:69865103-69865122 MsG0180003901.01.T01:intron 25.0%
! CTAGTTGACAATAGTAAAAT+GGG + Chr1:69866181-69866200 MsG0180003901.01.T01:intron 25.0%
! GAGCGAAATTTCAAAATATT+GGG - Chr1:69865875-69865894 None:intergenic 25.0%
! GCATTGTGTAACAAAAATTT+CGG + Chr1:69865390-69865409 MsG0180003901.01.T01:intron 25.0%
! GTTGCAAACTGAAATAAATA+CGG - Chr1:69863646-69863665 None:intergenic 25.0%
! TAACGAATACAACATAAACT+TGG - Chr1:69865671-69865690 None:intergenic 25.0%
! TACAAAATGTTGTCAAATAG+TGG + Chr1:69864350-69864369 MsG0180003901.01.T01:intron 25.0%
! TAGTTGACAATAGTAAAATG+GGG + Chr1:69866182-69866201 MsG0180003901.01.T01:intron 25.0%
! TCTAGTTGACAATAGTAAAA+TGG + Chr1:69866180-69866199 MsG0180003901.01.T01:intron 25.0%
! TGAAGAATGAGAATTTCATT+GGG + Chr1:69866028-69866047 MsG0180003901.01.T01:intron 25.0%
! TGAATATGAAACTATACTCA+AGG + Chr1:69865610-69865629 MsG0180003901.01.T01:intron 25.0%
! TGAGCGAAATTTCAAAATAT+TGG - Chr1:69865876-69865895 None:intergenic 25.0%
! TTAGAAACTTCGTAATCAAT+TGG - Chr1:69865142-69865161 None:intergenic 25.0%
! TTATGTTGAAAATCTGTTCA+AGG - Chr1:69865084-69865103 None:intergenic 25.0%
! TTGCAAACTGAAATAAATAC+GGG - Chr1:69863645-69863664 None:intergenic 25.0%
! TTTAGTGTCTCTATGTTTAA+TGG + Chr1:69864031-69864050 MsG0180003901.01.T01:intron 25.0%
! TTTGATGAATAACATGGAAA+TGG - Chr1:69865718-69865737 None:intergenic 25.0%
!! AATTTAAGAGCACACAATAT+TGG + Chr1:69863743-69863762 MsG0180003901.01.T01:intron 25.0%
!! CATTCAAAATCGTTTAAGTT+TGG + Chr1:69865770-69865789 MsG0180003901.01.T01:intron 25.0%
!! TATTGGGGATAATTTTTACA+CGG - Chr1:69865859-69865878 None:intergenic 25.0%
!! TTTCAGACAATTTTGTCAAA+AGG + Chr1:69864488-69864507 MsG0180003901.01.T01:intron 25.0%
!!! CTATTTCTATTTGTAGTCAT+TGG - Chr1:69867147-69867166 None:intergenic 25.0%
!!! TACATCATAATTTGTTGTAG+TGG - Chr1:69866796-69866815 None:intergenic 25.0%
!!! TAGATAGATTTTGATTTGTG+AGG + Chr1:69863071-69863090 MsG0180003901.01.T01:intron 25.0%
AAACAATGTAGGAGGTAATA+AGG - Chr1:69863668-69863687 None:intergenic 30.0%
AAATAAATACGGGTCATGTT+TGG - Chr1:69863635-69863654 None:intergenic 30.0%
AACAGTGATACACTGAAAAT+TGG - Chr1:69862959-69862978 None:intergenic 30.0%
AGTTGACAATAGTAAAATGG+GGG + Chr1:69866183-69866202 MsG0180003901.01.T01:intron 30.0%
ATACAACATAAACTTGGAGA+AGG - Chr1:69865665-69865684 None:intergenic 30.0%
ATCAGACACTTCATAAATTC+TGG + Chr1:69864810-69864829 MsG0180003901.01.T01:intron 30.0%
ATGAAACTATACTCAAGGAT+TGG + Chr1:69865615-69865634 MsG0180003901.01.T01:intron 30.0%
CTAAAGCATACTTTATCTTC+TGG - Chr1:69864256-69864275 None:intergenic 30.0%
GTCAATGAAGATGTTTGATT+GGG - Chr1:69864746-69864765 None:intergenic 30.0%
GTTCAAACAATAATAGGAAC+TGG + Chr1:69866621-69866640 MsG0180003901.01.T01:intron 30.0%
TAAAGATATGGTGTTTCCTT+AGG + Chr1:69864966-69864985 MsG0180003901.01.T01:intron 30.0%
TAGCTAATGTTGTCAAATAG+CGG + Chr1:69864273-69864292 MsG0180003901.01.T01:intron 30.0%
TCATTATATCTTAGGCAGAA+AGG - Chr1:69864918-69864937 None:intergenic 30.0%
TGAAAAACAATCCATCATGT+TGG + Chr1:69864154-69864173 MsG0180003901.01.T01:intron 30.0%
TGAACTAATCACATCAAATG+AGG - Chr1:69863301-69863320 None:intergenic 30.0%
TGGTTAACCTTACAAAAGTT+TGG + Chr1:69866725-69866744 MsG0180003901.01.T01:intron 30.0%
TTAGTATTTGTGAGACTGTT+TGG + Chr1:69863389-69863408 MsG0180003901.01.T01:intron 30.0%
TTGATCATCTGATGATTTGA+TGG + Chr1:69866451-69866470 MsG0180003901.01.T01:intron 30.0%
TTGCTACTATACATCACTAA+GGG - Chr1:69866358-69866377 None:intergenic 30.0%
! AACTCAAGTATTGTCAATCA+CGG - Chr1:69864438-69864457 None:intergenic 30.0%
! ATTTTGGATTCGATTCTTTG+AGG + Chr1:69863258-69863277 MsG0180003901.01.T01:intron 30.0%
! GGAATAACTGATTCTTAACA+TGG - Chr1:69865167-69865186 None:intergenic 30.0%
! TTGTAGTCAAAGCACTTAAA+TGG + Chr1:69865191-69865210 MsG0180003901.01.T01:intron 30.0%
! TTTTAGACTATTCTTGAAGG+AGG + Chr1:69866752-69866771 MsG0180003901.01.T01:intron 30.0%
! TTTTCCTTTTGCTTTGCAAT+AGG + Chr1:69862996-69863015 MsG0180003901.01.T01:intron 30.0%
!! AAGAATGAAGAAAGCATCAA+TGG - Chr1:69865531-69865550 None:intergenic 30.0%
!! AATTGTTGCAACTTGTTGTT+GGG + Chr1:69865368-69865387 MsG0180003901.01.T01:intron 30.0%
!! ACTTGTTGTTGTAATGACTA+TGG + Chr1:69863327-69863346 MsG0180003901.01.T01:intron 30.0%
!! ATCATAATTTGTTGTAGTGG+AGG - Chr1:69866793-69866812 None:intergenic 30.0%
!! CTTGTTGTTGTAATGACTAT+GGG + Chr1:69863328-69863347 MsG0180003901.01.T01:intron 30.0%
!! TAATTGTTGCAACTTGTTGT+TGG + Chr1:69865367-69865386 MsG0180003901.01.T01:intron 30.0%
!!! AGAATTCTTTTTTCCCATGA+TGG + Chr1:69865278-69865297 MsG0180003901.01.T01:intron 30.0%
!!! GAATTCTTTTTTCCCATGAT+GGG + Chr1:69865279-69865298 MsG0180003901.01.T01:intron 30.0%
!!! TAGATTTTGATTTGTGAGGT+TGG + Chr1:69863075-69863094 MsG0180003901.01.T01:intron 30.0%
!!! TTTTTTTTTTTGTGGTGGCA+AGG - Chr1:69866578-69866597 None:intergenic 30.0%
AATGGTAGCCACAATATTCA+TGG + Chr1:69864605-69864624 MsG0180003901.01.T01:intron 35.0%
AATGTTGATGTCATGAGTGA+TGG - Chr1:69865754-69865773 None:intergenic 35.0%
ACATTACAGAAACAGCAGTT+TGG + Chr1:69864655-69864674 MsG0180003901.01.T01:intron 35.0%
ACTATACTCAAGGATTGGAA+AGG + Chr1:69865620-69865639 MsG0180003901.01.T01:intron 35.0%
ACTTTGGTTGTTAACTGACA+TGG - Chr1:69864718-69864737 None:intergenic 35.0%
AGAGTAGAATGATGCTTATC+AGG + Chr1:69863798-69863817 MsG0180003901.01.T01:intron 35.0%
AGATACATACTTACCTGGAT+GGG - Chr1:69866915-69866934 None:intergenic 35.0%
AGTAGAATGATGCTTATCAG+GGG + Chr1:69863800-69863819 MsG0180003901.01.T01:intron 35.0%
ATACTAAACGTTACCCACTA+AGG - Chr1:69865253-69865272 None:intergenic 35.0%
ATCCATAACATAGCATAGCA+TGG - Chr1:69867062-69867081 None:intergenic 35.0%
ATGCTATGCTATGTTATGGA+TGG + Chr1:69867061-69867080 MsG0180003901.01.T01:intron 35.0%
ATTACAGAAACAGCAGTTTG+GGG + Chr1:69864657-69864676 MsG0180003901.01.T01:intron 35.0%
ATTACGTATACCTCCTTAGT+GGG + Chr1:69865237-69865256 MsG0180003901.01.T01:intron 35.0%
CAAACCTATTGCAAAGCAAA+AGG - Chr1:69863003-69863022 None:intergenic 35.0%
CATAATATATGCAAGGTCCA+GGG + Chr1:69866546-69866565 MsG0180003901.01.T01:intron 35.0%
CATTACAGAAACAGCAGTTT+GGG + Chr1:69864656-69864675 MsG0180003901.01.T01:intron 35.0%
CTTGCTACTATACATCACTA+AGG - Chr1:69866359-69866378 None:intergenic 35.0%
CTTTGGTTGTTAACTGACAT+GGG - Chr1:69864717-69864736 None:intergenic 35.0%
GAGTAGAATGATGCTTATCA+GGG + Chr1:69863799-69863818 MsG0180003901.01.T01:intron 35.0%
GATGAAGAAGAGATCTTTGA+TGG + Chr1:69862610-69862629 MsG0180003901.01.T01:intron 35.0%
GATTTCTTGATCTTCCATTG+TGG - Chr1:69867099-69867118 None:intergenic 35.0%
GGTCAAGTTAAGTAGATGAA+TGG + Chr1:69864987-69865006 MsG0180003901.01.T01:intron 35.0%
GGTCAATGAAGATGTTTGAT+TGG - Chr1:69864747-69864766 None:intergenic 35.0%
GTAGAAGAAACTTCTAGCAA+TGG - Chr1:69864777-69864796 None:intergenic 35.0%
GTCCAAGCTTCAAACTTAAT+GGG + Chr1:69864464-69864483 MsG0180003901.01.T01:intron 35.0%
GTTATGGATGGAATTGGAAT+AGG + Chr1:69867073-69867092 MsG0180003901.01.T01:intron 35.0%
TACTGAGATACATACTTACC+TGG - Chr1:69866920-69866939 None:intergenic 35.0%
TCCATAACATAGCATAGCAT+GGG - Chr1:69867061-69867080 None:intergenic 35.0%
TGAGCTAAGAGAATATGAGT+TGG + Chr1:69863113-69863132 MsG0180003901.01.T01:intron 35.0%
TGCTACTATACATCACTAAG+GGG - Chr1:69866357-69866376 None:intergenic 35.0%
TGCTATGTTATGGATGGAAT+TGG + Chr1:69867067-69867086 MsG0180003901.01.T01:intron 35.0%
TGTCCAAGCTTCAAACTTAA+TGG + Chr1:69864463-69864482 MsG0180003901.01.T01:intron 35.0%
TTAGGGAGTTGAAGATTATG+AGG - Chr1:69863983-69864002 None:intergenic 35.0%
TTATATCTTAGGCAGAAAGG+AGG - Chr1:69864915-69864934 None:intergenic 35.0%
TTCCAATACTTCACTTGCAT+GGG - Chr1:69863912-69863931 None:intergenic 35.0%
TTCCATGCTCAAAATCCAAA+GGG - Chr1:69865050-69865069 None:intergenic 35.0%
! AAAGTACATTTTCCCATGGT+GGG + Chr1:69866300-69866319 MsG0180003901.01.T01:intron 35.0%
! CAGACAATTTTGTCAAAAGG+AGG + Chr1:69864491-69864510 MsG0180003901.01.T01:intron 35.0%
! CATCTACTTAACTTGACCTA+AGG - Chr1:69864985-69865004 None:intergenic 35.0%
! CTTTGAGGAGTTAATCGTAT+TGG + Chr1:69863273-69863292 MsG0180003901.01.T01:intron 35.0%
! CTTTTGCTTTGCAATAGGTT+TGG + Chr1:69863001-69863020 MsG0180003901.01.T01:intron 35.0%
! GTAAGTTGGAGTAGGATTAA+TGG - Chr1:69862125-69862144 None:intergenic 35.0%
! TAGTGAAGAAGTTTTGCCAT+GGG - Chr1:69862213-69862232 None:intergenic 35.0%
! TAGTGGGTAACGTTTAGTAT+GGG + Chr1:69865253-69865272 MsG0180003901.01.T01:intron 35.0%
! TGGTTCTTTGTTTACAAGAC+TGG + Chr1:69864830-69864849 MsG0180003901.01.T01:intron 35.0%
! TTAGTGGGTAACGTTTAGTA+TGG + Chr1:69865252-69865271 MsG0180003901.01.T01:intron 35.0%
!! AAAAGTACATTTTCCCATGG+TGG + Chr1:69866299-69866318 MsG0180003901.01.T01:intron 35.0%
AAACGCAAAACGCATGAAGA+AGG - Chr1:69866085-69866104 None:intergenic 40.0%
AAAGGACACTTTCCCATCAT+GGG - Chr1:69865294-69865313 None:intergenic 40.0%
AACAGAACCACAGTCTAAAG+TGG - Chr1:69864092-69864111 None:intergenic 40.0%
AAGTGCTTTGACTACAAGCT+TGG - Chr1:69865188-69865207 None:intergenic 40.0%
ACAATAGTAAAATGGGGGTG+TGG + Chr1:69866188-69866207 MsG0180003901.01.T01:intron 40.0%
ACCCATGCTATGCTATGTTA+TGG + Chr1:69867057-69867076 MsG0180003901.01.T01:intron 40.0%
ACTTCTAGCAATGGAGATCA+TGG - Chr1:69864768-69864787 None:intergenic 40.0%
ACTTGCATGGGATCTAAACA+GGG - Chr1:69863900-69863919 None:intergenic 40.0%
ATAAAGCACGTACTCAGACA+CGG + Chr1:69862707-69862726 MsG0180003901.01.T01:intron 40.0%
ATCCCATGCAAGTGAAGTAT+TGG + Chr1:69863907-69863926 MsG0180003901.01.T01:intron 40.0%
ATGAGCTTAACTCAGTTGGT+AGG + Chr1:69866516-69866535 MsG0180003901.01.T01:intron 40.0%
CACGGATCACAAAAACATAG+TGG - Chr1:69864420-69864439 None:intergenic 40.0%
CATCTGATGATTTGATGGAG+AGG + Chr1:69866456-69866475 MsG0180003901.01.T01:intron 40.0%
CATTACGTATACCTCCTTAG+TGG + Chr1:69865236-69865255 MsG0180003901.01.T01:intron 40.0%
CCAAACCTCCATGAATATTG+TGG - Chr1:69864616-69864635 None:intergenic 40.0%
CCACAATATTCATGGAGGTT+TGG + Chr1:69864613-69864632 MsG0180003901.01.T01:intron 40.0%
CTTCCATGCTCAAAATCCAA+AGG - Chr1:69865051-69865070 None:intergenic 40.0%
GAAAGGTTATACCAGGTATG+AGG - Chr1:69864212-69864231 None:intergenic 40.0%
GAGAATAGCTGAAGTTGTGT+GGG - Chr1:69866971-69866990 None:intergenic 40.0%
GAGATACATACTTACCTGGA+TGG - Chr1:69866916-69866935 None:intergenic 40.0%
GATACATACTTACCTGGATG+GGG - Chr1:69866914-69866933 None:intergenic 40.0%
GCATAATATATGCAAGGTCC+AGG + Chr1:69866545-69866564 MsG0180003901.01.T01:intron 40.0%
GTTCCAATACTTCACTTGCA+TGG - Chr1:69863913-69863932 None:intergenic 40.0%
GTTCTACTTGAGAACACCTT+AGG + Chr1:69866820-69866839 MsG0180003901.01.T01:intron 40.0%
TAAAGGACACTTTCCCATCA+TGG - Chr1:69865295-69865314 None:intergenic 40.0%
TAAGGGGTAACGTTTAACCT+GGG - Chr1:69866341-69866360 None:intergenic 40.0%
TAGCTTCAATACCAAGCGAA+CGG + Chr1:69862657-69862676 MsG0180003901.01.T01:intron 40.0%
TTACAGAAACAGCAGTTTGG+GGG + Chr1:69864658-69864677 MsG0180003901.01.T01:intron 40.0%
TTCTTCTTCAACCCTGATAC+AGG - Chr1:69865990-69866009 None:intergenic 40.0%
TTGTCAAATAGTGGCTACAG+CGG + Chr1:69864359-69864378 MsG0180003901.01.T01:intron 40.0%
! AGAATATGAGTTGGAGGTCT+TGG + Chr1:69863122-69863141 MsG0180003901.01.T01:intron 40.0%
! AGAGAGTTGTAAGTTGGAGT+AGG - Chr1:69862133-69862152 None:intergenic 40.0%
! AGAGAGTTGTAAGTTGGAGT+GGG - Chr1:69862133-69862152 None:intergenic 40.0%
! AGCCCATTAAGTTTGAAGCT+TGG - Chr1:69864469-69864488 None:intergenic 40.0%
! CAGACGAGTTTGAGTTAAGA+CGG - Chr1:69864892-69864911 None:intergenic 40.0%
! CTTTGGATTTTGAGCATGGA+AGG + Chr1:69865049-69865068 MsG0180003901.01.T01:intron 40.0%
! GAATATGAGTTGGAGGTCTT+GGG + Chr1:69863123-69863142 MsG0180003901.01.T01:intron 40.0%
! GAGTGAAGAAGTTTTGCCAT+GGG - Chr1:69867295-69867314 None:intergenic 40.0%
! GATGTCATGAGTGATGGAAT+GGG - Chr1:69865748-69865767 None:intergenic 40.0%
! GATTTGCTTTCAGTTGTTGG+TGG + Chr1:69862634-69862653 MsG0180003901.01.T01:intron 40.0%
! GCTAAGAGAATATGAGTTGG+AGG + Chr1:69863116-69863135 MsG0180003901.01.T01:intron 40.0%
! GGTTGAGGTTGCGTTTTATA+CGG - Chr1:69862279-69862298 None:intergenic 40.0%
! GTAATGACTATGGGCTTGTT+TGG + Chr1:69863337-69863356 MsG0180003901.01.T01:intron 40.0%
! GTAGTGAAGAAGTTTTGCCA+TGG - Chr1:69862214-69862233 None:intergenic 40.0%
! TGATGTCATGAGTGATGGAA+TGG - Chr1:69865749-69865768 None:intergenic 40.0%
! TTTGCGTTTTGCCTGTATCA+GGG + Chr1:69865976-69865995 MsG0180003901.01.T01:intron 40.0%
! TTTTATACGGAGGGTGGTTT+CGG - Chr1:69862266-69862285 None:intergenic 40.0%
! TTTTGCGTTTTGCCTGTATC+AGG + Chr1:69865975-69865994 MsG0180003901.01.T01:intron 40.0%
!! AGAAAGCATCAATGGCAATC+TGG - Chr1:69865523-69865542 None:intergenic 40.0%
!! GAAAGCATCAATGGCAATCT+GGG - Chr1:69865522-69865541 None:intergenic 40.0%
!! GATTGTTTTTCAGACTGTGC+AGG - Chr1:69864146-69864165 None:intergenic 40.0%
!! GCAAGTGAAGTATTGGAACT+TGG + Chr1:69863914-69863933 MsG0180003901.01.T01:intron 40.0%
!! GCTGGTTTGCATATGAAATG+AGG - Chr1:69865828-69865847 None:intergenic 40.0%
!! GGGAAAAGTACATTTTCCCA+TGG + Chr1:69866296-69866315 MsG0180003901.01.T01:intron 40.0%
!! GGTGATTTGCTTTCAGTTGT+TGG + Chr1:69862631-69862650 MsG0180003901.01.T01:intron 40.0%
!! TTGTTTTGCATGCGGCATTT+CGG + Chr1:69867648-69867667 MsG0180003901.01.T01:CDS 40.0%
AACGGGGTACACTAGAATGT+AGG + Chr1:69867757-69867776 MsG0180003901.01.T01:CDS 45.0%
AGAACCAGTTGCCAACTTAC+TGG + Chr1:69866268-69866287 MsG0180003901.01.T01:intron 45.0%
AGAGTAGAATGAGGAGGAAG+CGG - Chr1:69867547-69867566 None:intergenic 45.0%
AGCTTCAATACCAAGCGAAC+AGG + Chr1:69862658-69862677 MsG0180003901.01.T01:intron 45.0%
AGCTTCAATACCAAGCGAAC+GGG + Chr1:69862658-69862677 MsG0180003901.01.T01:intron 45.0%
AGTGAGGATGAGTGAAGGAT+TGG - Chr1:69867319-69867338 None:intergenic 45.0%
ATCATACGCTTCCTCATACC+TGG + Chr1:69864198-69864217 MsG0180003901.01.T01:intron 45.0%
CACTTGCATGGGATCTAAAC+AGG - Chr1:69863901-69863920 None:intergenic 45.0%
CCAACTGAGTTAAGCTCATG+AGG - Chr1:69866515-69866534 None:intergenic 45.0%
CCTCATGAGCTTAACTCAGT+TGG + Chr1:69866512-69866531 MsG0180003901.01.T01:intron 45.0%
CTAAACGTTACCCACTAAGG+AGG - Chr1:69865250-69865269 None:intergenic 45.0%
CTAAGGGGTAACGTTTAACC+TGG - Chr1:69866342-69866361 None:intergenic 45.0%
CTACTTGAGAACACCTTAGG+CGG + Chr1:69866823-69866842 MsG0180003901.01.T01:intron 45.0%
CTCTCAAGTCTCCAACATGA+TGG - Chr1:69864168-69864187 None:intergenic 45.0%
CTGTGTCACATGGCAGAAAA+TGG + Chr1:69864587-69864606 MsG0180003901.01.T01:intron 45.0%
CTTGCATCCACTTTAGACTG+TGG + Chr1:69864082-69864101 MsG0180003901.01.T01:intron 45.0%
GAAATCCTATAGATGCCACC+AGG + Chr1:69864548-69864567 MsG0180003901.01.T01:intron 45.0%
GAAGAAGAGGAAGAACCAAG+CGG - Chr1:69862398-69862417 None:intergenic 45.0%
GAAGAGGATGAAGAGGATGA+TGG - Chr1:69862323-69862342 None:intergenic 45.0%
GAAGGGAGAGAGTTGTAAGT+TGG - Chr1:69862139-69862158 None:intergenic 45.0%
GCACACAATATTGGCATGCT+CGG + Chr1:69863752-69863771 MsG0180003901.01.T01:intron 45.0%
GCTTCAATACCAAGCGAACA+GGG + Chr1:69862659-69862678 MsG0180003901.01.T01:intron 45.0%
GGAATTGGAATAGGCCACAA+TGG + Chr1:69867082-69867101 MsG0180003901.01.T01:intron 45.0%
GGAGAATAGCTGAAGTTGTG+TGG - Chr1:69866972-69866991 None:intergenic 45.0%
GGATGGCTGAGATGAAAGAA+GGG + Chr1:69865343-69865362 MsG0180003901.01.T01:intron 45.0%
GGTAGCCACAATATTCATGG+AGG + Chr1:69864608-69864627 MsG0180003901.01.T01:intron 45.0%
GTGAGGATGAGTGAAGGATT+GGG - Chr1:69867318-69867337 None:intergenic 45.0%
GTGGAGAAGTTGAGGTTGAA+GGG - Chr1:69862156-69862175 None:intergenic 45.0%
GTGGGGAAGTTGAGTTTGAA+GGG - Chr1:69867238-69867257 None:intergenic 45.0%
GTTTGATTGGGTGCAGACTT+TGG - Chr1:69864734-69864753 None:intergenic 45.0%
TACAGAAACAGCAGTTTGGG+GGG + Chr1:69864659-69864678 MsG0180003901.01.T01:intron 45.0%
TACTTGAGAACACCTTAGGC+GGG + Chr1:69866824-69866843 MsG0180003901.01.T01:intron 45.0%
TATCAATGTCGACGTGTCCA+TGG - Chr1:69862743-69862762 None:intergenic 45.0%
TATTCATGGAGGTTTGGCAC+TGG + Chr1:69864619-69864638 MsG0180003901.01.T01:intron 45.0%
TCACATGTGCTGTGCTTTAG+AGG + Chr1:69863862-69863881 MsG0180003901.01.T01:intron 45.0%
TGAGGATGAGTGAAGGATTG+GGG - Chr1:69867317-69867336 None:intergenic 45.0%
TGGATGGCTGAGATGAAAGA+AGG + Chr1:69865342-69865361 MsG0180003901.01.T01:intron 45.0%
! AGCCCTTTGGATTTTGAGCA+TGG + Chr1:69865045-69865064 MsG0180003901.01.T01:intron 45.0%
! ATGCTCGGTGATGTTTGTTG+GGG + Chr1:69863767-69863786 MsG0180003901.01.T01:intron 45.0%
! ATGGCAATCTGGGAGGTATA+TGG - Chr1:69865512-69865531 None:intergenic 45.0%
! ATTTTGTCAAAAGGAGGCCG+TGG + Chr1:69864497-69864516 MsG0180003901.01.T01:intron 45.0%
! CATGCTCGGTGATGTTTGTT+GGG + Chr1:69863766-69863785 MsG0180003901.01.T01:intron 45.0%
! CATTTTCTGCCATGTGACAC+AGG - Chr1:69864589-69864608 None:intergenic 45.0%
! GAGAGAGTTGTAAGTTGGAG+TGG - Chr1:69862134-69862153 None:intergenic 45.0%
! GAGGTTGCGTTTTATACGGA+GGG - Chr1:69862275-69862294 None:intergenic 45.0%
! GGAGTGAAGAAGTTTTGCCA+TGG - Chr1:69867296-69867315 None:intergenic 45.0%
! GTAAGTTGGAGTGGGATAGA+TGG - Chr1:69867207-69867226 None:intergenic 45.0%
! TGAAGAAGTTTTGCCATGGG+CGG - Chr1:69862210-69862229 None:intergenic 45.0%
! TGAGGTTGCGTTTTATACGG+AGG - Chr1:69862276-69862295 None:intergenic 45.0%
! TGGCAATCTGGGAGGTATAT+GGG - Chr1:69865511-69865530 None:intergenic 45.0%
! TTTTACACGGATCTGTCAGC+TGG - Chr1:69865846-69865865 None:intergenic 45.0%
!! GGAAAAAAGAGTGCTTTCCC+AGG + Chr1:69866321-69866340 MsG0180003901.01.T01:intron 45.0%
!! TGATGATGGCGTAGTTGATG+CGG - Chr1:69867388-69867407 None:intergenic 45.0%
!!! AGCACTCTTTTTTCCCACCA+TGG - Chr1:69866316-69866335 None:intergenic 45.0%
!!! GCACTCTTTTTTCCCACCAT+GGG - Chr1:69866315-69866334 None:intergenic 45.0%
!!! ATATTATTATTTTAATTCAT+AGG - Chr1:69865421-69865440 None:intergenic 5.0%
!!! TAGATTAATTTTTATTTTTA+AGG - Chr1:69863195-69863214 None:intergenic 5.0%
ACCAGTTGCCAACTTACTGG+TGG + Chr1:69866271-69866290 MsG0180003901.01.T01:intron 50.0%
ACCTCCATTGCACTTAGGAG+GGG - Chr1:69866852-69866871 None:intergenic 50.0%
ACTTACCTGGATGGGGTCAA+TGG - Chr1:69866907-69866926 None:intergenic 50.0%
AGCATCAATGGCAATCTGGG+AGG - Chr1:69865519-69865538 None:intergenic 50.0%
AGCGGTCGTCAATGGTGAAA+CGG - Chr1:69862447-69862466 None:intergenic 50.0%
AGCGGTTGTCGATGGTGAAA+CGG - Chr1:69867529-69867548 None:intergenic 50.0%
ATCAAGAAGGCTCATGGCCT+AGG - Chr1:69866881-69866900 None:intergenic 50.0%
ATGAAGACGATGAGGGAGAG+AGG - Chr1:69862364-69862383 None:intergenic 50.0%
CGTCAATGGTGAAACGGAAG+AGG - Chr1:69862441-69862460 None:intergenic 50.0%
CGTGGAGAAGTTGAGGTTGA+AGG - Chr1:69862157-69862176 None:intergenic 50.0%
CGTGGGGAAGTTGAGTTTGA+AGG - Chr1:69867239-69867258 None:intergenic 50.0%
CTCTTCATGCAAGAGCCCTT+TGG + Chr1:69865032-69865051 MsG0180003901.01.T01:intron 50.0%
CTTACCTGGATGGGGTCAAT+GGG - Chr1:69866906-69866925 None:intergenic 50.0%
CTTCTTCTTCAGTGACCACC+TGG + Chr1:69867493-69867512 MsG0180003901.01.T01:CDS 50.0%
GACCTCCATTGCACTTAGGA+GGG - Chr1:69866853-69866872 None:intergenic 50.0%
GACTGGAGCAAACTCAAGCA+TGG + Chr1:69864847-69864866 MsG0180003901.01.T01:intron 50.0%
GACTTCCTGGTGGCATCTAT+AGG - Chr1:69864556-69864575 None:intergenic 50.0%
GAGGATGAGGAGGATGATGA+TGG - Chr1:69867402-69867421 None:intergenic 50.0%
GATAGAGAAGGCTGAGGAAG+AGG - Chr1:69862339-69862358 None:intergenic 50.0%
GATGCTTATCAGGGGTAGCT+TGG + Chr1:69863808-69863827 MsG0180003901.01.T01:intron 50.0%
GATTTCTGTCACGCCAACGA+TGG - Chr1:69864534-69864553 None:intergenic 50.0%
GCTGAAGTTGTGTGGGAAAG+TGG - Chr1:69866964-69866983 None:intergenic 50.0%
GCTTCAATACCAAGCGAACG+GGG + Chr1:69867741-69867760 MsG0180003901.01.T01:CDS 50.0%
GGAGGTCTTGGGTTCAAACT+CGG + Chr1:69863134-69863153 MsG0180003901.01.T01:intron 50.0%
GGGTCAATGGGTGATCAAGA+AGG - Chr1:69866894-69866913 None:intergenic 50.0%
GGTGGTCACTGAAGAAGAAG+AGG - Chr1:69867493-69867512 None:intergenic 50.0%
GTCTTGGGTTCAAACTCGGA+TGG + Chr1:69863138-69863157 MsG0180003901.01.T01:intron 50.0%
TCAGCTATTCTCCCCGATGT+GGG + Chr1:69866979-69866998 MsG0180003901.01.T01:intron 50.0%
TCTAGTGTACCCTGTTCGCT+TGG - Chr1:69862671-69862690 None:intergenic 50.0%
TGAAACGGAAGAGGATGACC+AGG - Chr1:69867514-69867533 None:intergenic 50.0%
TGAAGACGATGAGGGAGAGA+GGG - Chr1:69862363-69862382 None:intergenic 50.0%
TGACCTCCATTGCACTTAGG+AGG - Chr1:69866854-69866873 None:intergenic 50.0%
TGAGGGCAGAGAGTAGAATG+AGG - Chr1:69867556-69867575 None:intergenic 50.0%
TGGGTGATCAAGAAGGCTCA+TGG - Chr1:69866887-69866906 None:intergenic 50.0%
TGGTGACCTCCATTGCACTT+AGG - Chr1:69866857-69866876 None:intergenic 50.0%
TGTCGATGGTGAAACGGAAG+AGG - Chr1:69867523-69867542 None:intergenic 50.0%
TTCAGCTATTCTCCCCGATG+TGG + Chr1:69866978-69866997 MsG0180003901.01.T01:intron 50.0%
TTGCCAACTTACTGGTGGCA+GGG + Chr1:69866276-69866295 MsG0180003901.01.T01:intron 50.0%
TTTCCCTGCCACCAGTAAGT+TGG - Chr1:69866282-69866301 None:intergenic 50.0%
TTTCTGCCATGTGACACAGG+CGG - Chr1:69864586-69864605 None:intergenic 50.0%
! ACTAGTCTGAGTCCCACATC+GGG - Chr1:69866994-69867013 None:intergenic 50.0%
! AGTTGATGCGGAAGTGGTTG+AGG - Chr1:69862294-69862313 None:intergenic 50.0%
! CACTAGTCTGAGTCCCACAT+CGG - Chr1:69866995-69867014 None:intergenic 50.0%
! GAGGATGAAGAGGATGATGG+TGG - Chr1:69862320-69862339 None:intergenic 50.0%
! GCATGCTCGGTGATGTTTGT+TGG + Chr1:69863765-69863784 MsG0180003901.01.T01:intron 50.0%
! GTTGCGTTTTATACGGAGGG+TGG - Chr1:69862272-69862291 None:intergenic 50.0%
!! TGATGGTGGCGTAGTTGATG+CGG - Chr1:69862306-69862325 None:intergenic 50.0%
!! TGCGGTGGTTGTTTTGCATG+CGG + Chr1:69867640-69867659 MsG0180003901.01.T01:CDS 50.0%
!! TTGGTTTGCATGCGGCGTTT+CGG + Chr1:69862566-69862585 MsG0180003901.01.T01:intron 50.0%
AACGGAAGAGGATGACCAGG+TGG - Chr1:69867511-69867530 None:intergenic 55.0%
ACCCCTCCTAAGTGCAATGG+AGG + Chr1:69866848-69866867 MsG0180003901.01.T01:intron 55.0%
ACGTGGGGTAGTTGGAAGGT+GGG - Chr1:69867268-69867287 None:intergenic 55.0%
AGAAGGCTCATGGCCTAGGT+TGG - Chr1:69866877-69866896 None:intergenic 55.0%
AGACGGCGATGAAGACGATG+AGG - Chr1:69862372-69862391 None:intergenic 55.0%
AGAGTAGGACGAGGAGGAAG+CGG - Chr1:69862465-69862484 None:intergenic 55.0%
AGGAAGACGATGAGGGAGAG+AGG - Chr1:69867446-69867465 None:intergenic 55.0%
AGTGGGGGAGAGTGAAGGAT+TGG - Chr1:69862237-69862256 None:intergenic 55.0%
ATCACCCATTGACCCCATCC+AGG + Chr1:69866899-69866918 MsG0180003901.01.T01:intron 55.0%
CGTGGGGTAGTTAGAAGGTG+TGG - Chr1:69862185-69862204 None:intergenic 55.0%
CTAGTCTGAGTCCCACATCG+GGG - Chr1:69866993-69867012 None:intergenic 55.0%
CTGGCTTAACGTCCTCGTGT+CGG + Chr1:69862522-69862541 MsG0180003901.01.T01:intron 55.0%
CTGTGCAGGCAGTGTTCAAG+TGG - Chr1:69864132-69864151 None:intergenic 55.0%
GAAGAACCAAGCGGCGAAGA+CGG - Chr1:69862389-69862408 None:intergenic 55.0%
GACGGCGATGAAGACGATGA+GGG - Chr1:69862371-69862390 None:intergenic 55.0%
GAGGACGTTAAGCCAGACAC+CGG - Chr1:69862518-69862537 None:intergenic 55.0%
GAGGGAGTGAGGATGAGTGA+AGG - Chr1:69867324-69867343 None:intergenic 55.0%
GAGGGTGATAGAGAAGGCTG+AGG - Chr1:69862345-69862364 None:intergenic 55.0%
GCAATGGAGGTCACCAACCT+AGG + Chr1:69866861-69866880 MsG0180003901.01.T01:intron 55.0%
GGAAGACGATGAGGGAGAGA+GGG - Chr1:69867445-69867464 None:intergenic 55.0%
GGCTGAGGAAGAGGATGAAG+AGG - Chr1:69862330-69862349 None:intergenic 55.0%
GGGAGAGAGGGTGATAGAGA+AGG - Chr1:69862351-69862370 None:intergenic 55.0%
GGGCAGAGAGTAGAATGAGG+AGG - Chr1:69867553-69867572 None:intergenic 55.0%
GGTGAAACGGAAGAGGACGA+CGG - Chr1:69862434-69862453 None:intergenic 55.0%
GTGAAACGGAAGAGGACGAC+GGG - Chr1:69862433-69862452 None:intergenic 55.0%
GTGGGGGAGAGTGAAGGATT+GGG - Chr1:69862236-69862255 None:intergenic 55.0%
GTTGCCAACTTACTGGTGGC+AGG + Chr1:69866275-69866294 MsG0180003901.01.T01:intron 55.0%
TCTAGTGTACCCCGTTCGCT+TGG - Chr1:69867753-69867772 None:intergenic 55.0%
TGAAACGGAAGAGGACGACG+GGG - Chr1:69862432-69862451 None:intergenic 55.0%
TGGTGGCAAGGTTTGAACCC+TGG - Chr1:69866566-69866585 None:intergenic 55.0%
! GCCACCAGTAAGTTGGCAAC+TGG - Chr1:69866275-69866294 None:intergenic 55.0%
! GGGGTAGTTAGAAGGTGTGG+TGG - Chr1:69862182-69862201 None:intergenic 55.0%
! TGGCGTAGTTGATGCGGAAG+TGG - Chr1:69862300-69862319 None:intergenic 55.0%
!! TGCGGTGGTTGGTTTGCATG+CGG + Chr1:69862558-69862577 MsG0180003901.01.T01:intron 55.0%
ACGGAGGGTGGTTTCGGAGA+GGG - Chr1:69862260-69862279 None:intergenic 60.0%
AGACGATGAGGGAGAGAGGG+TGG - Chr1:69862360-69862379 None:intergenic 60.0%
AGACGGCGAGGAAGACGATG+AGG - Chr1:69867454-69867473 None:intergenic 60.0%
AGGCGGCACTACAGACTTCC+TGG - Chr1:69864569-69864588 None:intergenic 60.0%
CACGTGGGGTAGTTGGAAGG+TGG - Chr1:69867269-69867288 None:intergenic 60.0%
CGCTTGTCTTCACCGGTGTC+TGG + Chr1:69862503-69862522 MsG0180003901.01.T01:intron 60.0%
CGGCACTACAGACTTCCTGG+TGG - Chr1:69864566-69864585 None:intergenic 60.0%
CGTGGGGTAGTTGGAAGGTG+GGG - Chr1:69867267-69867286 None:intergenic 60.0%
GACACGGACACCAGATGCCA+TGG + Chr1:69862723-69862742 MsG0180003901.01.T01:intron 60.0%
GACGGCGAGGAAGACGATGA+GGG - Chr1:69867453-69867472 None:intergenic 60.0%
GAGGACGTTAAGCCAGACGC+CGG - Chr1:69867600-69867619 None:intergenic 60.0%
GAGGAGGAAGCGGTCGTCAA+TGG - Chr1:69862455-69862474 None:intergenic 60.0%
GAGGAGGAAGCGGTTGTCGA+TGG - Chr1:69867537-69867556 None:intergenic 60.0%
GGAGGCTGAGGAAGAGGATG+AGG - Chr1:69867415-69867434 None:intergenic 60.0%
GGCACCCCTCCTAAGTGCAA+TGG + Chr1:69866845-69866864 MsG0180003901.01.T01:intron 60.0%
GGCGGTCACGGAAGAAGAAG+AGG - Chr1:69862411-69862430 None:intergenic 60.0%
GGCTGAGGAAGAGGATGAGG+AGG - Chr1:69867412-69867431 None:intergenic 60.0%
GGTGAAGACAAGCGCGACGA+CGG - Chr1:69862497-69862516 None:intergenic 60.0%
GGTGGTTTCGGAGAGGGAGT+GGG - Chr1:69862254-69862273 None:intergenic 60.0%
GTAGTGCCGCCTGTGTCACA+TGG + Chr1:69864577-69864596 MsG0180003901.01.T01:intron 60.0%
GTCGACGTGTCCATGGCATC+TGG - Chr1:69862736-69862755 None:intergenic 60.0%
GTCGTCGCGCTTGTCTTCAC+CGG + Chr1:69862496-69862515 MsG0180003901.01.T01:intron 60.0%
GTGGTTTCGGAGAGGGAGTG+AGG - Chr1:69862253-69862272 None:intergenic 60.0%
GTGGTTTCGGAGAGGGAGTG+GGG - Chr1:69862253-69862272 None:intergenic 60.0%
TACGGAGGGTGGTTTCGGAG+AGG - Chr1:69862261-69862280 None:intergenic 60.0%
TGAGGGAGAGAGGGTGGTAG+CGG - Chr1:69867436-69867455 None:intergenic 60.0%
TGGTTTCGGAGAGGGAGTGG+GGG - Chr1:69862252-69862271 None:intergenic 60.0%
! GTCCTCGTGTCGGTGCTCAT+CGG + Chr1:69862532-69862551 MsG0180003901.01.T01:intron 60.0%
! GTCCTCGTGTCGGTGCTCTT+CGG + Chr1:69867614-69867633 MsG0180003901.01.T01:CDS 60.0%
! TTAGAAGGTGTGGTGGCGCG+TGG - Chr1:69862175-69862194 None:intergenic 60.0%
! TTTTGCCATGGGCGGCACGT+GGG - Chr1:69867284-69867303 None:intergenic 60.0%
AACGGAAGAGGACGACGGGG+CGG - Chr1:69862429-69862448 None:intergenic 65.0%
AGACAAGCGCGACGACGGTG+AGG - Chr1:69862492-69862511 None:intergenic 65.0%
AGACGAGCGCGACGACTGTG+AGG - Chr1:69867574-69867593 None:intergenic 65.0%
CGATGGCAGCAGCACTGCCA+CGG - Chr1:69864517-69864536 None:intergenic 65.0%
CGGCACGTGGGGTAGTTGGA+AGG - Chr1:69867272-69867291 None:intergenic 65.0%
CGGCGCGTGGGGTAGTTAGA+AGG - Chr1:69862190-69862209 None:intergenic 65.0%
GACAAGCGCGACGACGGTGA+GGG - Chr1:69862491-69862510 None:intergenic 65.0%
GACGAGCGCGACGACTGTGA+GGG - Chr1:69867573-69867592 None:intergenic 65.0%
GAGGGAGTGGGGGAGAGTGA+AGG - Chr1:69862242-69862261 None:intergenic 65.0%
GGGGTAGTTGGAAGGTGGGG+TGG - Chr1:69867264-69867283 None:intergenic 65.0%
GGGTGGTTTCGGAGAGGGAG+TGG - Chr1:69862255-69862274 None:intergenic 65.0%
GGTGGCGCGTGGAGAAGTTG+AGG - Chr1:69862164-69862183 None:intergenic 65.0%
GTCGTCGCGCTCGTCTTCAC+CGG + Chr1:69867578-69867597 MsG0180003901.01.T01:CDS 65.0%
TCATCGCCGTCTTCGCCGCT+TGG + Chr1:69862380-69862399 MsG0180003901.01.T01:CDS 65.0%
TGAGGGCGGAGAGTAGGACG+AGG - Chr1:69862474-69862493 None:intergenic 65.0%
TTTGCCATGGGCGGCACGTG+GGG - Chr1:69867283-69867302 None:intergenic 65.0%
! GGCAGTGCTGCTGCCATCGT+TGG + Chr1:69864518-69864537 MsG0180003901.01.T01:intron 65.0%
! GTTTTGCCATGGGCGGCACG+TGG - Chr1:69867285-69867304 None:intergenic 65.0%
! TTTTGCCATGGGCGGCGCGT+GGG - Chr1:69862202-69862221 None:intergenic 65.0%
!! CACCGAAGAGCACCGACACG+AGG - Chr1:69867619-69867638 None:intergenic 65.0%
!! CACCGATGAGCACCGACACG+AGG - Chr1:69862537-69862556 None:intergenic 65.0%
!! CTCATCGGTGCTGCGGTGGT+TGG + Chr1:69862547-69862566 MsG0180003901.01.T01:intron 65.0%
!! GGTAGCGGAGGCTGAGGAAG+AGG - Chr1:69867421-69867440 None:intergenic 65.0%
!! GTCGGTGCTCATCGGTGCTG+CGG + Chr1:69862540-69862559 MsG0180003901.01.T01:intron 65.0%
!! GTCGGTGCTCTTCGGTGCTG+CGG + Chr1:69867622-69867641 MsG0180003901.01.T01:CDS 65.0%
!! TTAGGAGGGGTGCCCGCCTA+AGG - Chr1:69866839-69866858 None:intergenic 65.0%
AAGCGCGACGACGGTGAGGG+CGG - Chr1:69862488-69862507 None:intergenic 70.0%
ACCAAGCGGCGAAGACGGCG+AGG - Chr1:69862384-69862403 None:intergenic 70.0%
ACTACCCCACGTGCCGCCCA+TGG + Chr1:69867276-69867295 MsG0180003901.01.T01:CDS 70.0%
AGAGGACGACGGGGCGGTCA+CGG - Chr1:69862423-69862442 None:intergenic 70.0%
CGACGGTGAGGGCGGAGAGT+AGG - Chr1:69862480-69862499 None:intergenic 70.0%
CGCTCGTCTTCACCGGCGTC+TGG + Chr1:69867585-69867604 MsG0180003901.01.T01:CDS 70.0%
GAAGGAGGCTGCGCGAACGC+AGG + Chr1:69866767-69866786 MsG0180003901.01.T01:intron 70.0%
GGGCGGAGAGTAGGACGAGG+AGG - Chr1:69862471-69862490 None:intergenic 70.0%
TCCTCGCCGTCTTCGCCGCT+TGG + Chr1:69867462-69867481 MsG0180003901.01.T01:CDS 70.0%
TGGAAGGTGGGGTGGCGCGT+GGG - Chr1:69867256-69867275 None:intergenic 70.0%
TGGGCGGCACGTGGGGTAGT+TGG - Chr1:69867276-69867295 None:intergenic 70.0%
TTGGAAGGTGGGGTGGCGCG+TGG - Chr1:69867257-69867276 None:intergenic 70.0%
TTTGCCATGGGCGGCGCGTG+GGG - Chr1:69862201-69862220 None:intergenic 70.0%
! GTTTTGCCATGGGCGGCGCG+TGG - Chr1:69862203-69862222 None:intergenic 70.0%
!! GAGGGTGGTAGCGGAGGCTG+AGG - Chr1:69867427-69867446 None:intergenic 70.0%
!! GGGAGAGAGGGTGGTAGCGG+AGG - Chr1:69867433-69867452 None:intergenic 70.0%
!! GGTGCTCATCGGTGCTGCGG+TGG + Chr1:69862543-69862562 MsG0180003901.01.T01:intron 70.0%
!! GGTGCTCTTCGGTGCTGCGG+TGG + Chr1:69867625-69867644 MsG0180003901.01.T01:CDS 70.0%
ACTACCCCACGCGCCGCCCA+TGG + Chr1:69862194-69862213 MsG0180003901.01.T02:intron 75.0%
GGAAGGTGGGGTGGCGCGTG+GGG - Chr1:69867255-69867274 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr1 gene 69862115 69867778 69862115 ID=MsG0180003901.01;Name=MsG0180003901.01
Chr1 mRNA 69862323 69867778 69862323 ID=MsG0180003901.01.T01;Parent=MsG0180003901.01;Name=MsG0180003901.01.T01;_AED=0.50;_eAED=0.50;_QI=0|0|0|1|0|0|2|0|204
Chr1 exon 69862323 69862401 69862323 ID=MsG0180003901.01.T01:exon:52313;Parent=MsG0180003901.01.T01
Chr1 CDS 69862323 69862401 69862323 ID=MsG0180003901.01.T01:cds;Parent=MsG0180003901.01.T01
Chr1 CDS 69867243 69867778 69867243 ID=MsG0180003901.01.T01:cds;Parent=MsG0180003901.01.T01
Chr1 mRNA 69862115 69867778 69862115 ID=MsG0180003901.01.T02;Parent=MsG0180003901.01;Name=MsG0180003901.01.T02;_AED=0.50;_eAED=0.50;_QI=0|0|0|1|0|0|2|0|202
Chr1 exon 69862115 69862187 69862115 ID=MsG0180003901.01.T02:exon:52315;Parent=MsG0180003901.01.T02
Chr1 CDS 69862115 69862187 69862115 ID=MsG0180003901.01.T02:cds;Parent=MsG0180003901.01.T02
Chr1 CDS 69867243 69867778 69867243 ID=MsG0180003901.01.T02:cds;Parent=MsG0180003901.01.T02
Chr1 mRNA 69862115 69862696 69862115 ID=MsG0180003901.01.T03;Parent=MsG0180003901.01;Name=MsG0180003901.01.T03;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|0|1|0|193
Chr1 exon 69862115 69862696 69862115 ID=MsG0180003901.01.T03:exon:52316;Parent=MsG0180003901.01.T03
Chr1 CDS 69862115 69862696 69862115 ID=MsG0180003901.01.T03:cds;Parent=MsG0180003901.01.T03
Chr1 mRNA 69867197 69867778 69867197 ID=MsG0180003901.01.T04;Parent=MsG0180003901.01;Name=MsG0180003901.01.T04;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|0|1|0|193
Chr1 exon 69867197 69867778 69867197 ID=MsG0180003901.01.T04:exon:52317;Parent=MsG0180003901.01.T04
Chr1 CDS 69867197 69867778 69867197 ID=MsG0180003901.01.T04:cds;Parent=MsG0180003901.01.T04
Chr1 mRNA 69862213 69862425 69862213 ID=MsG0180003901.01.T05;Parent=MsG0180003901.01;Name=MsG0180003901.01.T05;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|0|1|0|70
Chr1 exon 69862213 69862425 69862213 ID=MsG0180003901.01.T05:exon:52318;Parent=MsG0180003901.01.T05
Chr1 CDS 69862213 69862425 69862213 ID=MsG0180003901.01.T05:cds;Parent=MsG0180003901.01.T05
Chr1 mRNA 69867295 69867507 69867295 ID=MsG0180003901.01.T06;Parent=MsG0180003901.01;Name=MsG0180003901.01.T06;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|0|1|0|70
Chr1 exon 69867295 69867507 69867295 ID=MsG0180003901.01.T06:exon:52319;Parent=MsG0180003901.01.T06
Chr1 CDS 69867295 69867507 69867295 ID=MsG0180003901.01.T06:cds;Parent=MsG0180003901.01.T06
Gene Sequence

>MsG0180003901.01.T04

ATGTCTTCCATCTATCCCACTCCAACTTACAACTCTCTCCCTTCAAACTCAACTTCCCCACGCGCCACCCCACCTTCCAACTACCCCACGTGCCGCCCATGGCAAAACTTCTTCACTCCCCAATCCTTCACTCATCCTCACTCCCTCTCCGAAACCACCCTCCGTATAAAACGCAACCTCAACCACTTCCGCATCAACTACGCCATCATCATCCTCCTCATCCTCTTCCTCAGCCTCCGCTACCACCCTCTCTCCCTCATCGTCTTCCTCGCCGTCTTCGCCGCTTGGTTCTTCCTCTTCTTCTTCAGTGACCACCTGGTCATCCTCTTCCGTTTCACCATCGACAACCGCTTCCTCCTCATTCTACTCTCTGCCCTCACAGTCGTCGCGCTCGTCTTCACCGGCGTCTGGCTTAACGTCCTCGTGTCGGTGCTCTTCGGTGCTGCGGTGGTTGTTTTGCATGCGGCATTTCGGAGTATTGATGATTTGTATTTAGATGAAGAAGAGATCTTTGATGGTGATTTGCTTTCAGTTGTTGGTGGTAGCTTCAATACCAAGCGAACGGGGTACACTAGAATGTAG

>MsG0180003901.01.T06

ATGGCAAAACTTCTTCACTCCCCAATCCTTCACTCATCCTCACTCCCTCTCCGAAACCACCCTCCGTATAAAACGCAACCTCAACCACTTCCGCATCAACTACGCCATCATCATCCTCCTCATCCTCTTCCTCAGCCTCCGCTACCACCCTCTCTCCCTCATCGTCTTCCTCGCCGTCTTCGCCGCTTGGTTCTTCCTCTTCTTCTTCAGTGA

>MsG0180003901.01.T02

ATGTCTTCCATTAATCCTACTCCAACTTACAACTCTCTCCCTTCAACCTCAACTTCTCCACGCGCCACCACACACTCAACTTCCCCACGCGCCACCCCACCTTCCAACTACCCCACGTGCCGCCCATGGCAAAACTTCTTCACTCCCCAATCCTTCACTCATCCTCACTCCCTCTCCGAAACCACCCTCCGTATAAAACGCAACCTCAACCACTTCCGCATCAACTACGCCATCATCATCCTCCTCATCCTCTTCCTCAGCCTCCGCTACCACCCTCTCTCCCTCATCGTCTTCCTCGCCGTCTTCGCCGCTTGGTTCTTCCTCTTCTTCTTCAGTGACCACCTGGTCATCCTCTTCCGTTTCACCATCGACAACCGCTTCCTCCTCATTCTACTCTCTGCCCTCACAGTCGTCGCGCTCGTCTTCACCGGCGTCTGGCTTAACGTCCTCGTGTCGGTGCTCTTCGGTGCTGCGGTGGTTGTTTTGCATGCGGCATTTCGGAGTATTGATGATTTGTATTTAGATGAAGAAGAGATCTTTGATGGTGATTTGCTTTCAGTTGTTGGTGGTAGCTTCAATACCAAGCGAACGGGGTACACTAGAATGTAG

>MsG0180003901.01.T05

ATGGCAAAACTTCTTCACTACCCAATCCTTCACTCTCCCCCACTCCCTCTCCGAAACCACCCTCCGTATAAAACGCAACCTCAACCACTTCCGCATCAACTACGCCACCATCATCCTCTTCATCCTCTTCCTCAGCCTTCTCTATCACCCTCTCTCCCTCATCGTCTTCATCGCCGTCTTCGCCGCTTGGTTCTTCCTCTTCTTCTTCCGTGA

>MsG0180003901.01.T03

ATGTCTTCCATTAATCCTACTCCAACTTACAACTCTCTCCCTTCAACCTCAACTTCTCCACGCGCCACCACACCTTCTAACTACCCCACGCGCCGCCCATGGCAAAACTTCTTCACTACCCAATCCTTCACTCTCCCCCACTCCCTCTCCGAAACCACCCTCCGTATAAAACGCAACCTCAACCACTTCCGCATCAACTACGCCACCATCATCCTCTTCATCCTCTTCCTCAGCCTTCTCTATCACCCTCTCTCCCTCATCGTCTTCATCGCCGTCTTCGCCGCTTGGTTCTTCCTCTTCTTCTTCCGTGACCGCCCCGTCGTCCTCTTCCGTTTCACCATTGACGACCGCTTCCTCCTCGTCCTACTCTCCGCCCTCACCGTCGTCGCGCTTGTCTTCACCGGTGTCTGGCTTAACGTCCTCGTGTCGGTGCTCATCGGTGCTGCGGTGGTTGGTTTGCATGCGGCGTTTCGGAGTATTGATGATTTGTATTTAGATGAAGAAGAGATCTTTGATGGTGATTTGCTTTCAGTTGTTGGTGGTAGCTTCAATACCAAGCGAACAGGGTACACTAGAATGTAG

>MsG0180003901.01.T01

TCATCCTCTTCATCCTCTTCCTCAGCCTTCTCTATCACCCTCTCTCCCTCATCGTCTTCATCGCCGTCTTCGCCGCTTGACTCAACTTCCCCACGCGCCACCCCACCTTCCAACTACCCCACGTGCCGCCCATGGCAAAACTTCTTCACTCCCCAATCCTTCACTCATCCTCACTCCCTCTCCGAAACCACCCTCCGTATAAAACGCAACCTCAACCACTTCCGCATCAACTACGCCATCATCATCCTCCTCATCCTCTTCCTCAGCCTCCGCTACCACCCTCTCTCCCTCATCGTCTTCCTCGCCGTCTTCGCCGCTTGGTTCTTCCTCTTCTTCTTCAGTGACCACCTGGTCATCCTCTTCCGTTTCACCATCGACAACCGCTTCCTCCTCATTCTACTCTCTGCCCTCACAGTCGTCGCGCTCGTCTTCACCGGCGTCTGGCTTAACGTCCTCGTGTCGGTGCTCTTCGGTGCTGCGGTGGTTGTTTTGCATGCGGCATTTCGGAGTATTGATGATTTGTATTTAGATGAAGAAGAGATCTTTGATGGTGATTTGCTTTCAGTTGTTGGTGGTAGCTTCAATACCAAGCGAACGGGGTACACTAGAATGTAG
Protein sequence

>MsG0180003901.01.T04

MSSIYPTPTYNSLPSNSTSPRATPPSNYPTCRPWQNFFTPQSFTHPHSLSETTLRIKRNLNHFRINYAIIILLILFLSLRYHPLSLIVFLAVFAAWFFLFFFSDHLVILFRFTIDNRFLLILLSALTVVALVFTGVWLNVLVSVLFGAAVVVLHAAFRSIDDLYLDEEEIFDGDLLSVVGGSFNTKRTGYTRM*

>MsG0180003901.01.T06

MAKLLHSPILHSSSLPLRNHPPYKTQPQPLPHQLRHHHPPHPLPQPPLPPSLPHRLPRRLRRLVLPLLLQ*

>MsG0180003901.01.T02

MSSINPTPTYNSLPSTSTSPRATTHSTSPRATPPSNYPTCRPWQNFFTPQSFTHPHSLSETTLRIKRNLNHFRINYAIIILLILFLSLRYHPLSLIVFLAVFAAWFFLFFFSDHLVILFRFTIDNRFLLILLSALTVVALVFTGVWLNVLVSVLFGAAVVVLHAAFRSIDDLYLDEEEIFDGDLLSVVGGSFNTKRTGYTRM*

>MsG0180003901.01.T05

MAKLLHYPILHSPPLPLRNHPPYKTQPQPLPHQLRHHHPLHPLPQPSLSPSLPHRLHRRLRRLVLPLLLP*

>MsG0180003901.01.T03

MSSINPTPTYNSLPSTSTSPRATTPSNYPTRRPWQNFFTTQSFTLPHSLSETTLRIKRNLNHFRINYATIILFILFLSLLYHPLSLIVFIAVFAAWFFLFFFRDRPVVLFRFTIDDRFLLVLLSALTVVALVFTGVWLNVLVSVLIGAAVVGLHAAFRSIDDLYLDEEEIFDGDLLSVVGGSFNTKRTGYTRM*

>MsG0180003901.01.T01

SSSSSSSSAFSITLSPSSSSSPSSPLDSTSPRATPPSNYPTCRPWQNFFTPQSFTHPHSLSETTLRIKRNLNHFRINYAIIILLILFLSLRYHPLSLIVFLAVFAAWFFLFFFSDHLVILFRFTIDNRFLLILLSALTVVALVFTGVWLNVLVSVLFGAAVVVLHAAFRSIDDLYLDEEEIFDGDLLSVVGGSFNTKRTGYTRM*