AlfalfaGEDB | MsG0580029262.01

M. sativa cultivar ZhongmuNo.1 / MsG0580029262.01

KEGG: K20359
GO: -
PFAM: PF03208

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580029262.01.T02	XP_003616714.2	97.196	214	6	0	1	214	1	214	2.50E-143	408
MsG0580029262.01.T03	XP_003616714.2	95.833	48	2	0	1	48	167	214	7.37E-18	82.8

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580029262.01.T02	O80915	62.562	203	75	1	2	203	4	206	5.61E-95	279
MsG0580029262.01.T03	O80915	75.676	37	9	0	1	37	170	206	3.16E-15	68.6

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580029262.01.T02	G7K792	97.196	214	6	0	1	214	1	214	1.19e-143	408
MsG0580029262.01.T03	G7K792	95.833	48	2	0	1	48	167	214	3.52e-18	82.8

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048507.01	MsG0580029262.01	0.805676	1.189976e-49	6.334281e-47
MsG0180001610.01	MsG0580029262.01	-0.809856	1.538629e-50	9.134313e-48
MsG0180002700.01	MsG0580029262.01	-0.814590	1.425897e-51	9.607204e-49
MsG0180005918.01	MsG0580029262.01	0.821525	3.855277e-53	3.143932e-50
MsG0280011110.01	MsG0580029262.01	0.812553	4.002112e-51	2.552366e-48
MsG0380012567.01	MsG0580029262.01	-0.810609	1.058585e-50	6.410130e-48
MsG0380012868.01	MsG0580029262.01	-0.805601	1.233800e-49	6.554678e-47
MsG0380013295.01	MsG0580029262.01	0.805001	1.648107e-49	8.621877e-47
MsG0480018525.01	MsG0580029262.01	0.876402	1.436933e-68	6.957144e-65
MsG0480018676.01	MsG0580029262.01	-0.802390	5.738169e-49	2.807575e-46
MsG0480020502.01	MsG0580029262.01	-0.807200	5.678398e-50	3.143234e-47
MsG0480021248.01	MsG0580029262.01	-0.822632	2.135238e-53	1.797254e-50
MsG0480022162.01	MsG0580029262.01	-0.813861	2.065584e-51	1.364470e-48
MsG0480022491.01	MsG0580029262.01	0.805428	1.341497e-49	7.095345e-47
MsG0480022994.01	MsG0580029262.01	-0.801691	7.990478e-49	3.840273e-46
MsG0480023190.01	MsG0580029262.01	-0.806660	7.386517e-50	4.031721e-47
MsG0480023723.01	MsG0580029262.01	-0.813583	2.378633e-51	1.559461e-48
MsG0580025561.01	MsG0580029262.01	0.835276	1.844219e-56	2.244456e-53
MsG0580025827.01	MsG0580029262.01	-0.820067	8.340870e-53	6.532815e-50
MsG0380016188.01	MsG0580029262.01	0.804631	1.969407e-49	1.020449e-46
MsG0580026159.01	MsG0580029262.01	0.857610	1.452074e-62	3.604878e-59
MsG0580028065.01	MsG0580029262.01	0.868721	5.291770e-66	1.934249e-62
MsG0580029262.01	MsG0580029352.01	0.832714	8.075036e-56	9.100426e-53
MsG0580029262.01	MsG0680030599.01	-0.810376	1.188591e-50	7.152820e-48
MsG0580029262.01	MsG0680031826.01	-0.808692	2.733124e-50	1.573071e-47
MsG0580029262.01	MsG0680034394.01	0.809056	2.284543e-50	1.327701e-47
MsG0580029262.01	MsG0780035965.01	-0.800368	1.489399e-48	6.922935e-46
MsG0580029262.01	MsG0780036792.01	-0.830100	3.550619e-55	3.704422e-52
MsG0580029262.01	MsG0780038056.01	-0.841085	5.884162e-58	8.550081e-55
MsG0580029262.01	MsG0780040881.01	0.821211	4.554326e-53	3.682099e-50
MsG0580029262.01	MsG0880042026.01	-0.804393	2.207148e-49	1.136673e-46
MsG0580029262.01	MsG0880045722.01	-0.809301	2.024422e-50	1.184288e-47
MsG0580029262.01	MsG0880047481.01	0.835258	1.863221e-56	2.266352e-53
MsG0580029262.01	MsG0880047657.01	-0.807575	4.726920e-50	2.642093e-47
MsG0280007647.01	MsG0580029262.01	-0.816943	4.261042e-52	3.061591e-49
MsG0280008288.01	MsG0580029262.01	0.803037	4.219577e-49	2.098689e-46

PPI

Gene1	Gene2	Type
MsG0180003901.01	MsG0580029262.01	PPI
MsG0180003901.01	MsG0580029262.01	PPI
MsG0180003901.01	MsG0580029262.01	PPI
MsG0580029262.01	MsG0780040703.01	PPI
MsG0580029262.01	MsG0180003901.01	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580029262.01.T02	MTR_5g083490	97.196	214	6	0	1	214	1	214	3.02e-147	408
MsG0580029262.01.T02	MTR_4g014060	61.290	186	71	1	27	211	35	220	1.73e-80	240
MsG0580029262.01.T02	MTR_0562s0010	61.290	186	71	1	27	211	35	220	1.73e-80	240
MsG0580029262.01.T02	MTR_7g096220	43.182	176	96	3	36	210	24	196	3.46e-40	136
MsG0580029262.01.T02	MTR_3g031070	45.349	172	89	1	20	191	2	168	1.38e-32	117
MsG0580029262.01.T02	MTR_1g070480	40.764	157	91	1	48	204	28	182	1.42e-28	106
MsG0580029262.01.T02	MTR_2g100260	34.146	164	98	4	37	194	22	181	1.93e-28	105
MsG0580029262.01.T02	MTR_8g016150	37.725	167	102	1	19	185	2	166	3.14e-24	94.7
MsG0580029262.01.T02	MTR_2g100270	38.068	176	104	2	19	194	6	176	8.28e-24	94.0
MsG0580029262.01.T02	MTR_6g092690	28.962	183	122	2	11	193	2	176	2.08e-23	93.2
MsG0580029262.01.T02	MTR_1g080760	42.949	156	83	2	52	207	35	184	2.63e-23	92.8
MsG0580029262.01.T02	MTR_1g093090	36.538	156	98	1	37	191	8	163	4.78e-18	78.6
MsG0580029262.01.T03	MTR_5g083490	95.833	48	2	0	1	48	167	214	8.93e-22	82.8
MsG0580029262.01.T03	MTR_4g014060	58.696	46	18	1	1	45	175	220	2.99e-12	58.2
MsG0580029262.01.T03	MTR_0562s0010	58.696	46	18	1	1	45	175	220	2.99e-12	58.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580029262.01.T02	AT2G38360	62.562	203	75	1	2	203	4	206	5.72e-96	279
MsG0580029262.01.T02	AT5G05380	67.164	201	61	1	1	201	45	240	9.92e-87	257
MsG0580029262.01.T02	AT5G05380	67.164	201	61	1	1	201	53	248	1.04e-86	257
MsG0580029262.01.T02	AT5G05380	67.164	201	61	1	1	201	2	197	1.06e-86	255
MsG0580029262.01.T02	AT3G56110	65.174	201	63	1	1	201	1	194	1.86e-86	254
MsG0580029262.01.T02	AT3G56110	65.174	201	63	1	1	201	1	194	1.86e-86	254
MsG0580029262.01.T02	AT3G56110	65.174	201	63	1	1	201	1	194	1.86e-86	254
MsG0580029262.01.T02	AT3G56110	65.174	201	63	1	1	201	1	194	1.86e-86	254
MsG0580029262.01.T02	AT5G05380	67.164	201	61	1	1	201	69	264	2.36e-86	257
MsG0580029262.01.T02	AT5G01640	52.427	206	89	2	2	202	4	205	1.09e-77	233
MsG0580029262.01.T02	AT2G40380	63.366	202	68	1	2	203	3	198	1.68e-74	224
MsG0580029262.01.T02	AT5G07110	55.738	183	77	1	19	197	8	190	2.30e-59	186
MsG0580029262.01.T02	AT1G55190	37.705	183	105	4	22	200	9	186	1.65e-32	116
MsG0580029262.01.T02	AT4G00005	57.000	100	43	0	74	173	2	101	5.91e-32	112
MsG0580029262.01.T02	AT3G13710	34.659	176	109	2	19	194	8	177	1.03e-28	106
MsG0580029262.01.T02	AT1G08770	33.333	162	108	0	38	199	34	195	2.88e-26	100
MsG0580029262.01.T02	AT1G17700	36.994	173	107	1	21	193	6	176	1.54e-24	95.9
MsG0580029262.01.T02	AT3G13720	35.443	158	100	1	37	194	22	177	9.92e-24	94.0
MsG0580029262.01.T02	AT5G56230	32.418	182	116	3	22	198	2	181	1.92e-22	90.5
MsG0580029262.01.T02	AT1G04260	31.548	168	113	1	37	204	6	171	5.09e-22	89.4
MsG0580029262.01.T02	AT1G55640	31.210	157	105	2	37	192	23	177	1.64e-18	80.1
MsG0580029262.01.T02	AT4G29658	30.625	160	106	2	35	191	18	175	2.78e-16	74.3
MsG0580029262.01.T03	AT2G38360	75.676	37	9	0	1	37	170	206	3.22e-16	68.6
MsG0580029262.01.T03	AT5G05380	77.143	35	8	0	1	35	206	240	1.97e-14	64.3
MsG0580029262.01.T03	AT5G05380	77.143	35	8	0	1	35	214	248	2.09e-14	64.3
MsG0580029262.01.T03	AT5G05380	77.143	35	8	0	1	35	230	264	2.35e-14	64.3
MsG0580029262.01.T03	AT5G05380	77.143	35	8	0	1	35	163	197	5.98e-14	62.8
MsG0580029262.01.T03	AT2G40380	66.667	36	12	0	2	37	163	198	1.55e-12	58.9
MsG0580029262.01.T03	AT5G01640	58.974	39	16	0	1	39	170	208	4.56e-12	57.8
MsG0580029262.01.T03	AT3G56110	68.571	35	11	0	1	35	160	194	1.28e-11	56.2
MsG0580029262.01.T03	AT3G56110	68.571	35	11	0	1	35	160	194	1.28e-11	56.2
MsG0580029262.01.T03	AT3G56110	68.571	35	11	0	1	35	160	194	1.28e-11	56.2
MsG0580029262.01.T03	AT3G56110	68.571	35	11	0	1	35	160	194	1.28e-11	56.2

Find 82 sgRNAs with CRISPR-Local

Find 83 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GGTGGTGCTGGTGTTGGATA+TGG	0.240654	5:+94458262	None:intergenic
TATGCTTCGGCAAGAGTTTC+GGG	0.244120	5:+94458110	None:intergenic
ACGGGATTCTTATCGTTTCT+TGG	0.275846	5:-94457723	MsG0580029262.01.T02:CDS
TGGCGATCGGTGGTTGAGAT+TGG	0.282317	5:+94458240	None:intergenic
CTGCGAGAGCGAAGATGATT+AGG	0.284772	5:+94458039	None:intergenic
ATGTGAAATTCTTGCGGATT+CGG	0.315878	5:+94458084	None:intergenic
GTATGCTTCGGCAAGAGTTT+CGG	0.325212	5:+94458109	None:intergenic
TGGTCCTTGTTCGTTCTTCT+CGG	0.331951	5:-94457996	MsG0580029262.01.T01:CDS
GTGGATTGGGAAGTGGAAAC+GGG	0.332376	5:+94458284	None:intergenic
AGGACCATGGATGTGTGATT+AGG	0.355218	5:+94458012	None:intergenic
TGTGAAATTCTTGCGGATTC+GGG	0.360685	5:+94458085	None:intergenic
GAGATGAATGCGCGGAAAGC+GGG	0.362977	5:+94458215	None:intergenic
GGTGTTGGATATGGTGGATT+GGG	0.368044	5:+94458271	None:intergenic
GGACCATGGATGTGTGATTA+GGG	0.378240	5:+94458013	None:intergenic
ATCATCAAGAAACAAATCTT+CGG	0.379952	5:+94457761	None:intergenic
GTTGTTGATCTCTGCGCTTA+TGG	0.381739	5:-94457826	MsG0580029262.01.T01:CDS
AGATTTGTTTCTTGATGATC+AGG	0.389550	5:-94457757	MsG0580029262.01.T02:CDS
GGCGATCGGTGGTTGAGATT+GGG	0.393998	5:+94458241	None:intergenic
GGTGGATTGGGAAGTGGAAA+CGG	0.394090	5:+94458283	None:intergenic
TTCGGACCAGGGACGGCGTT+GGG	0.405527	5:+94458160	None:intergenic
CCTTCTCCCAACGCCGTCCC+TGG	0.410509	5:-94458166	MsG0580029262.01.T02:CDS
TGGTGTTGGATATGGTGGAT+TGG	0.416693	5:+94458270	None:intergenic
GGTGCTGGTGTTGGATATGG+TGG	0.417359	5:+94458265	None:intergenic
TGAGGAACGGTCGATGAGTT+CGG	0.422158	5:+94458142	None:intergenic
AGATTGGGTGGTGCTGGTGT+TGG	0.426571	5:+94458256	None:intergenic
TTCTCGGTCTTCTTGCTTCG+TGG	0.433749	5:-94457980	MsG0580029262.01.T01:CDS
TCATCAAGAAACAAATCTTC+GGG	0.436107	5:+94457762	None:intergenic
TTGATCTCTGCGCTTATGGT+TGG	0.438891	5:-94457822	MsG0580029262.01.T01:CDS
CTCTGCGCTTATGGTTGGAT+TGG	0.443122	5:-94457817	MsG0580029262.01.T01:CDS
TGGTTGAGATTGGGTGGTGC+TGG	0.448544	5:+94458250	None:intergenic
GATCAACCTCTCGTTCTCTT+CGG	0.458353	5:-94457930	MsG0580029262.01.T01:CDS
GTTGTGTTTCTTACTGCCGT+TGG	0.462273	5:-94457852	MsG0580029262.01.T01:CDS
CCAGGGACGGCGTTGGGAGA+AGG	0.465648	5:+94458166	None:intergenic
GAAGGCTTGACGGAGGGAGG+AGG	0.474425	5:+94458184	None:intergenic
TGCGAGAGCGAAGATGATTA+GGG	0.477760	5:+94458040	None:intergenic
GAGCGAAGATGATTAGGGTT+AGG	0.478271	5:+94458045	None:intergenic
GACGGAGGGAGGAGGAGATG+CGG	0.481200	5:+94458192	None:intergenic
ACGGAGGGAGGAGGAGATGC+GGG	0.483044	5:+94458193	None:intergenic
GCGGATTCGGGAGTATGCTT+CGG	0.487170	5:+94458097	None:intergenic
GAGTGTCGGTGGAGAGGACA+TGG	0.489018	5:+94458307	None:intergenic
GGCGTTGGGAGAAGGCTTGA+CGG	0.493276	5:+94458174	None:intergenic
ACGGTCGATGAGTTCGGACC+AGG	0.497627	5:+94458148	None:intergenic
AGTTTCGGGACGGGAGATTG+AGG	0.502283	5:+94458124	None:intergenic
GGATATGGTGGATTGGGAAG+TGG	0.503254	5:+94458277	None:intergenic
GATCAGGAGGTGAGTAGTAC+GGG	0.507080	5:-94457741	MsG0580029262.01.T02:CDS
TTGGCGATTGTGTGTGCGCA+TGG	0.516927	5:-94457798	MsG0580029262.01.T01:CDS
GAAGAGAACGAGAGGTTGAT+CGG	0.520068	5:+94457932	None:intergenic
GGATTCTTATCGTTTCTTGG+TGG	0.523419	5:-94457720	MsG0580029262.01.T02:CDS
TGATCAGGAGGTGAGTAGTA+CGG	0.525246	5:-94457742	MsG0580029262.01.T02:CDS
TTCGGCAAGAGTTTCGGGAC+GGG	0.525477	5:+94458115	None:intergenic
AACGGGGAGTGTCGGTGGAG+AGG	0.530414	5:+94458301	None:intergenic
TTGAATCGCGGCGTTAGCAG+CGG	0.532993	5:+94457692	None:intergenic
GTGGAAACGGGGAGTGTCGG+TGG	0.534371	5:+94458296	None:intergenic
TTTGCAGATCGTGAAACGCT+AGG	0.550246	5:-94457900	MsG0580029262.01.T01:intron
TTGCAGATCGTGAAACGCTA+GGG	0.553499	5:-94457899	MsG0580029262.01.T01:intron
GTTGATCGGAAGGACGGAAG+AGG	0.556915	5:+94457946	None:intergenic
GGAGATGAATGCGCGGAAAG+CGG	0.557009	5:+94458214	None:intergenic
AGATGAATGCGCGGAAAGCG+GGG	0.561715	5:+94458216	None:intergenic
TTGGGAGAAGGCTTGACGGA+GGG	0.564649	5:+94458178	None:intergenic
GTTCGGACCAGGGACGGCGT+TGG	0.573205	5:+94458159	None:intergenic
GATCGGTGGTTGAGATTGGG+TGG	0.577090	5:+94458244	None:intergenic
CGATGAGTTCGGACCAGGGA+CGG	0.577381	5:+94458153	None:intergenic
GAAGTGGAAACGGGGAGTGT+CGG	0.578014	5:+94458293	None:intergenic
GGAGAAGGCTTGACGGAGGG+AGG	0.578616	5:+94458181	None:intergenic
AAGACCGAGAAGAACGAACA+AGG	0.583542	5:+94457992	None:intergenic
AGAACGAGAGGTTGATCGGA+AGG	0.584166	5:+94457936	None:intergenic
GATGAATGCGCGGAAAGCGG+GGG	0.585413	5:+94458217	None:intergenic
CGAGAGGTTGATCGGAAGGA+CGG	0.591390	5:+94457940	None:intergenic
GAAAGTATGTGAAATTCTTG+CGG	0.592085	5:+94458078	None:intergenic
TTTGTTTCTTGATGATCAGG+AGG	0.597146	5:-94457754	MsG0580029262.01.T02:CDS
TGGATTGGGAAGTGGAAACG+GGG	0.599442	5:+94458285	None:intergenic
CAATTACACGCGTTGAATCG+CGG	0.603845	5:+94457680	None:intergenic
CTTCGGCAAGAGTTTCGGGA+CGG	0.630250	5:+94458114	None:intergenic
TTTCCCTAATCACACATCCA+TGG	0.630889	5:-94458016	MsG0580029262.01.T02:CDS
AGAAGAACGAACAAGGACCA+TGG	0.638113	5:+94457999	None:intergenic
GTTGGGAGAAGGCTTGACGG+AGG	0.642320	5:+94458177	None:intergenic
GTGCGTCCGAAGAGAACGAG+AGG	0.644143	5:+94457924	None:intergenic
CGGTCGATGAGTTCGGACCA+GGG	0.648946	5:+94458149	None:intergenic
TGAAACGCTAGGGCTTCTTG+TGG	0.652168	5:-94457889	MsG0580029262.01.T01:intron
AGAGATCAACAACGATCCAA+CGG	0.666421	5:+94457836	None:intergenic
AGATGCGGGAGATGAATGCG+CGG	0.678556	5:+94458207	None:intergenic
CGGGACGGGAGATTGAGGAA+CGG	0.722451	5:+94458129	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	ATCATCAAGAAACAAATCTT+CGG	+	Chr5:94458230-94458249	None:intergenic	25.0%
	TCATCAAGAAACAAATCTTC+GGG	+	Chr5:94458229-94458248	None:intergenic	30.0%
!	AGATTTGTTTCTTGATGATC+AGG	-	Chr5:94458231-94458250	MsG0580029262.01.T02:CDS	30.0%
!	GAAAGTATGTGAAATTCTTG+CGG	+	Chr5:94457913-94457932	None:intergenic	30.0%
	ATGTGAAATTCTTGCGGATT+CGG	+	Chr5:94457907-94457926	None:intergenic	35.0%
!	TTTGTTTCTTGATGATCAGG+AGG	-	Chr5:94458234-94458253	MsG0580029262.01.T02:CDS	35.0%
	ACGGGATTCTTATCGTTTCT+TGG	-	Chr5:94458265-94458284	MsG0580029262.01.T02:CDS	40.0%
	AGAGATCAACAACGATCCAA+CGG	+	Chr5:94458155-94458174	None:intergenic	40.0%
	GGATTCTTATCGTTTCTTGG+TGG	-	Chr5:94458268-94458287	MsG0580029262.01.T02:CDS	40.0%
	TGTGAAATTCTTGCGGATTC+GGG	+	Chr5:94457906-94457925	None:intergenic	40.0%
	TTTCCCTAATCACACATCCA+TGG	-	Chr5:94457972-94457991	MsG0580029262.01.T01:CDS	40.0%
	AAGACCGAGAAGAACGAACA+AGG	+	Chr5:94457999-94458018	None:intergenic	45.0%
	AGAAGAACGAACAAGGACCA+TGG	+	Chr5:94457992-94458011	None:intergenic	45.0%
	AGGACCATGGATGTGTGATT+AGG	+	Chr5:94457979-94457998	None:intergenic	45.0%
	GAGCGAAGATGATTAGGGTT+AGG	+	Chr5:94457946-94457965	None:intergenic	45.0%
	GATCAACCTCTCGTTCTCTT+CGG	-	Chr5:94458058-94458077	MsG0580029262.01.T02:CDS	45.0%
	GGACCATGGATGTGTGATTA+GGG	+	Chr5:94457978-94457997	None:intergenic	45.0%
	GTATGCTTCGGCAAGAGTTT+CGG	+	Chr5:94457882-94457901	None:intergenic	45.0%
	GTTGTGTTTCTTACTGCCGT+TGG	-	Chr5:94458136-94458155	MsG0580029262.01.T02:CDS	45.0%
	GTTGTTGATCTCTGCGCTTA+TGG	-	Chr5:94458162-94458181	MsG0580029262.01.T02:CDS	45.0%
	TATGCTTCGGCAAGAGTTTC+GGG	+	Chr5:94457881-94457900	None:intergenic	45.0%
	TGATCAGGAGGTGAGTAGTA+CGG	-	Chr5:94458246-94458265	MsG0580029262.01.T02:CDS	45.0%
	TGCGAGAGCGAAGATGATTA+GGG	+	Chr5:94457951-94457970	None:intergenic	45.0%
	TGGTCCTTGTTCGTTCTTCT+CGG	-	Chr5:94457992-94458011	MsG0580029262.01.T01:CDS	45.0%
	TTGATCTCTGCGCTTATGGT+TGG	-	Chr5:94458166-94458185	MsG0580029262.01.T02:CDS	45.0%
	TTGCAGATCGTGAAACGCTA+GGG	-	Chr5:94458089-94458108	MsG0580029262.01.T02:CDS	45.0%
	TTTGCAGATCGTGAAACGCT+AGG	-	Chr5:94458088-94458107	MsG0580029262.01.T02:CDS	45.0%
!	GAAGAGAACGAGAGGTTGAT+CGG	+	Chr5:94458059-94458078	None:intergenic	45.0%
!!	GGTGTTGGATATGGTGGATT+GGG	+	Chr5:94457720-94457739	None:intergenic	45.0%
!!	TGGTGTTGGATATGGTGGAT+TGG	+	Chr5:94457721-94457740	None:intergenic	45.0%
	CTCTGCGCTTATGGTTGGAT+TGG	-	Chr5:94458171-94458190	MsG0580029262.01.T02:CDS	50.0%
	CTGCGAGAGCGAAGATGATT+AGG	+	Chr5:94457952-94457971	None:intergenic	50.0%
	GATCAGGAGGTGAGTAGTAC+GGG	-	Chr5:94458247-94458266	MsG0580029262.01.T02:CDS	50.0%
	TGAAACGCTAGGGCTTCTTG+TGG	-	Chr5:94458099-94458118	MsG0580029262.01.T02:CDS	50.0%
	TGAGGAACGGTCGATGAGTT+CGG	+	Chr5:94457849-94457868	None:intergenic	50.0%
	TTCTCGGTCTTCTTGCTTCG+TGG	-	Chr5:94458008-94458027	MsG0580029262.01.T02:CDS	50.0%
!	AGAACGAGAGGTTGATCGGA+AGG	+	Chr5:94458055-94458074	None:intergenic	50.0%
!	TGGATTGGGAAGTGGAAACG+GGG	+	Chr5:94457706-94457725	None:intergenic	50.0%
!!	GGATATGGTGGATTGGGAAG+TGG	+	Chr5:94457714-94457733	None:intergenic	50.0%
!!	GGTGGATTGGGAAGTGGAAA+CGG	+	Chr5:94457708-94457727	None:intergenic	50.0%
!!	GTGGATTGGGAAGTGGAAAC+GGG	+	Chr5:94457707-94457726	None:intergenic	50.0%
	AGATGAATGCGCGGAAAGCG+GGG	+	Chr5:94457775-94457794	None:intergenic	55.0%
	AGATGCGGGAGATGAATGCG+CGG	+	Chr5:94457784-94457803	None:intergenic	55.0%
	AGTTTCGGGACGGGAGATTG+AGG	+	Chr5:94457867-94457886	None:intergenic	55.0%
	CTTCGGCAAGAGTTTCGGGA+CGG	+	Chr5:94457877-94457896	None:intergenic	55.0%
	GAGATGAATGCGCGGAAAGC+GGG	+	Chr5:94457776-94457795	None:intergenic	55.0%
	GATCGGTGGTTGAGATTGGG+TGG	+	Chr5:94457747-94457766	None:intergenic	55.0%
	GGAGATGAATGCGCGGAAAG+CGG	+	Chr5:94457777-94457796	None:intergenic	55.0%
	GGCGATCGGTGGTTGAGATT+GGG	+	Chr5:94457750-94457769	None:intergenic	55.0%
	GTTGATCGGAAGGACGGAAG+AGG	+	Chr5:94458045-94458064	None:intergenic	55.0%
	TGGCGATCGGTGGTTGAGAT+TGG	+	Chr5:94457751-94457770	None:intergenic	55.0%
	TGGTTGAGATTGGGTGGTGC+TGG	+	Chr5:94457741-94457760	None:intergenic	55.0%
	TTCGGCAAGAGTTTCGGGAC+GGG	+	Chr5:94457876-94457895	None:intergenic	55.0%
	TTGAATCGCGGCGTTAGCAG+CGG	+	Chr5:94458299-94458318	None:intergenic	55.0%
	TTGGCGATTGTGTGTGCGCA+TGG	-	Chr5:94458190-94458209	MsG0580029262.01.T02:CDS	55.0%
	TTGGGAGAAGGCTTGACGGA+GGG	+	Chr5:94457813-94457832	None:intergenic	55.0%
!	CGAGAGGTTGATCGGAAGGA+CGG	+	Chr5:94458051-94458070	None:intergenic	55.0%
!	GAAGTGGAAACGGGGAGTGT+CGG	+	Chr5:94457698-94457717	None:intergenic	55.0%
!	GCGGATTCGGGAGTATGCTT+CGG	+	Chr5:94457894-94457913	None:intergenic	55.0%
!!	AGATTGGGTGGTGCTGGTGT+TGG	+	Chr5:94457735-94457754	None:intergenic	55.0%
!!	GGTGCTGGTGTTGGATATGG+TGG	+	Chr5:94457726-94457745	None:intergenic	55.0%
!!	GGTGGTGCTGGTGTTGGATA+TGG	+	Chr5:94457729-94457748	None:intergenic	55.0%
	ACGGTCGATGAGTTCGGACC+AGG	+	Chr5:94457843-94457862	None:intergenic	60.0%
	CGATGAGTTCGGACCAGGGA+CGG	+	Chr5:94457838-94457857	None:intergenic	60.0%
	CGGGACGGGAGATTGAGGAA+CGG	+	Chr5:94457862-94457881	None:intergenic	60.0%
	CGGTCGATGAGTTCGGACCA+GGG	+	Chr5:94457842-94457861	None:intergenic	60.0%
	GATGAATGCGCGGAAAGCGG+GGG	+	Chr5:94457774-94457793	None:intergenic	60.0%
	GTGCGTCCGAAGAGAACGAG+AGG	+	Chr5:94458067-94458086	None:intergenic	60.0%
	GTTGGGAGAAGGCTTGACGG+AGG	+	Chr5:94457814-94457833	None:intergenic	60.0%
!	GGCGTTGGGAGAAGGCTTGA+CGG	+	Chr5:94457817-94457836	None:intergenic	60.0%
	ACGGAGGGAGGAGGAGATGC+GGG	+	Chr5:94457798-94457817	None:intergenic	65.0%
	GAAGGCTTGACGGAGGGAGG+AGG	+	Chr5:94457807-94457826	None:intergenic	65.0%
	GACGGAGGGAGGAGGAGATG+CGG	+	Chr5:94457799-94457818	None:intergenic	65.0%
	GGAGAAGGCTTGACGGAGGG+AGG	+	Chr5:94457810-94457829	None:intergenic	65.0%
	TTCGGACCAGGGACGGCGTT+GGG	+	Chr5:94457831-94457850	None:intergenic	65.0%
!!	AACGGGGAGTGTCGGTGGAG+AGG	+	Chr5:94457690-94457709	None:intergenic	65.0%
!!	GTGGAAACGGGGAGTGTCGG+TGG	+	Chr5:94457695-94457714	None:intergenic	65.0%
	AAAGCGGGGGTGGCGATCGG+TGG	+	Chr5:94457761-94457780	None:intergenic	70.0%
	CCTTCTCCCAACGCCGTCCC+TGG	-	Chr5:94457822-94457841	MsG0580029262.01.T01:CDS	70.0%
	CGGAAAGCGGGGGTGGCGAT+CGG	+	Chr5:94457764-94457783	None:intergenic	70.0%
	GAATGCGCGGAAAGCGGGGG+TGG	+	Chr5:94457771-94457790	None:intergenic	70.0%
	GTTCGGACCAGGGACGGCGT+TGG	+	Chr5:94457832-94457851	None:intergenic	70.0%
!	CCAGGGACGGCGTTGGGAGA+AGG	+	Chr5:94457825-94457844	None:intergenic	70.0%

Chromosome	Type	Strat	End	Strand	Name
Chr5	gene	94457683	94458327	94457683	ID=MsG0580029262.01;Name=MsG0580029262.01
Chr5	mRNA	94457765	94458019	94457765	ID=MsG0580029262.01.T01;Parent=MsG0580029262.01;Name=MsG0580029262.01.T01;_AED=0.50;_eAED=1.00;_QI=0\|0\|0\|1\|0\|0\|2\|0\|69
Chr5	exon	94457765	94457878	94457765	ID=MsG0580029262.01.T01:exon:26815;Parent=MsG0580029262.01.T01
Chr5	exon	94457924	94458019	94457924	ID=MsG0580029262.01.T01:exon:26814;Parent=MsG0580029262.01.T01
Chr5	CDS	94457924	94458019	94457924	ID=MsG0580029262.01.T01:cds;Parent=MsG0580029262.01.T01
Chr5	CDS	94457765	94457878	94457765	ID=MsG0580029262.01.T01:cds;Parent=MsG0580029262.01.T01
Chr5	mRNA	94457683	94458327	94457683	ID=MsG0580029262.01.T02;Parent=MsG0580029262.01;Name=MsG0580029262.01.T02;_AED=0.50;_eAED=0.50;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|214
Chr5	exon	94457683	94458327	94457683	ID=MsG0580029262.01.T02:exon:26816;Parent=MsG0580029262.01.T02
Chr5	CDS	94457683	94458327	94457683	ID=MsG0580029262.01.T02:cds;Parent=MsG0580029262.01.T02
Chr5	mRNA	94457683	94457829	94457683	ID=MsG0580029262.01.T03;Parent=MsG0580029262.01;Name=MsG0580029262.01.T03;_AED=0.50;_eAED=0.50;_QI=0\|-1\|0\|1\|-1\|0\|1\|0\|48
Chr5	exon	94457683	94457829	94457683	ID=MsG0580029262.01.T03:exon:26817;Parent=MsG0580029262.01.T03
Chr5	CDS	94457683	94457829	94457683	ID=MsG0580029262.01.T03:cds;Parent=MsG0580029262.01.T03
Chr5	mRNA	94457909	94458019	94457909	ID=MsG0580029262.01.T04;Parent=MsG0580029262.01;Name=MsG0580029262.01.T04;_AED=0.50;_eAED=0.50;_QI=0\|-1\|0\|1\|-1\|0\|1\|0\|36
Chr5	exon	94457909	94458019	94457909	ID=MsG0580029262.01.T04:exon:26818;Parent=MsG0580029262.01.T04
Chr5	CDS	94457909	94458019	94457909	ID=MsG0580029262.01.T04:cds;Parent=MsG0580029262.01.T04

Gene Sequence

>MsG0580029262.01.T04

ATGGTCCTTGTTCGTTCTTCTCGGTCTTCTTGCTTCGTGGTCGTTTCTCTACCTCTTCCGTCCTTCCGATCAACCTCTCGTTCTCTTCGGACGCACGTTTGCAGATCGTGA

>MsG0580029262.01.T01

ATGGTCCTTGTTCGTTCTTCTCGGTCTTCTTGCTTCGTGGTCGTTTCTCTACCTCTTCCGTCCTTCCGATCAACCTCTCGTTCTCTTCGGACGCACTTTCGTTGTGTTTCTTACTGCCGTTGGATCGTTGTTGATCTCTGCGCTTATGGTTGGATTGGCGATTGTGTGTGCGCATGGTGCGTTTCGTGTTCCCGAAGATTTGTTTCTTGA

>MsG0580029262.01.T02

ATGTCCTCTCCACCGACACTCCCCGTTTCCACTTCCCAATCCACCATATCCAACACCAGCACCACCCAATCTCAACCACCGATCGCCACCCCCGCTTTCCGCGCATTCATCTCCCGCATCTCCTCCTCCCTCCGTCAAGCCTTCTCCCAACGCCGTCCCTGGTCCGAACTCATCGACCGTTCCTCAATCTCCCGTCCCGAAACTCTTGCCGAAGCATACTCCCGAATCCGCAAGAATTTCACATACTTTCGTGTCAATTACCTAACCCTAATCATCTTCGCTCTCGCAGTTTCCCTAATCACACATCCATGGTCCTTGTTCGTTCTTCTCGGTCTTCTTGCTTCGTGGTCGTTTCTCTACCTCTTCCGTCCTTCCGATCAACCTCTCGTTCTCTTCGGACGCACGTTTGCAGATCGTGAAACGCTAGGGCTTCTTGTGGTTCTAACGATTTTCGTTGTGTTTCTTACTGCCGTTGGATCGTTGTTGATCTCTGCGCTTATGGTTGGATTGGCGATTGTGTGTGCGCATGGTGCGTTTCGTGTTCCCGAAGATTTGTTTCTTGATGATCAGGAGGTGAGTAGTACGGGATTCTTATCGTTTCTTGGTGGTGCTGCCGCTGCTAACGCCGCGATTCAACGCGTGTAA

>MsG0580029262.01.T03

ATGGTTGGATTGGCGATTGTGTGTGCGCATGGTGCGTTTCGTGTTCCCGAAGATTTGTTTCTTGATGATCAGGAGGTGAGTAGTACGGGATTCTTATCGTTTCTTGGTGGTGCTGCCGCTGCTAACGCCGCGATTCAACGCGTGTAA

Protein sequence

>MsG0580029262.01.T04

MVLVRSSRSSCFVVVSLPLPSFRSTSRSLRTHVCRS*

>MsG0580029262.01.T01

MVLVRSSRSSCFVVVSLPLPSFRSTSRSLRTHFRCVSYCRWIVVDLCAYGWIGDCVCAWCVSCSRRFVS*

>MsG0580029262.01.T02

MSSPPTLPVSTSQSTISNTSTTQSQPPIATPAFRAFISRISSSLRQAFSQRRPWSELIDRSSISRPETLAEAYSRIRKNFTYFRVNYLTLIIFALAVSLITHPWSLFVLLGLLASWSFLYLFRPSDQPLVLFGRTFADRETLGLLVVLTIFVVFLTAVGSLLISALMVGLAIVCAHGAFRVPEDLFLDDQEVSSTGFLSFLGGAAAANAAIQRV*

>MsG0580029262.01.T03

MVGLAIVCAHGAFRVPEDLFLDDQEVSSTGFLSFLGGAAAANAAIQRV*