AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180004012.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004012.01.T01 MTR_1g072850 81.679 655 67 3 16 617 20 674 0.0 1066
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004012.01.T01 AT4G27510 34.286 560 300 17 93 612 193 724 2.26e-65 228
MsG0180004012.01.T01 AT4G27510 34.300 414 229 11 93 490 193 579 9.21e-48 177

Find 132 sgRNAs with CRISPR-Local

Find 285 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGGGAGATTTAGTTGATTT+AGG 0.164817 1:-71825111 MsG0180004012.01.T01:CDS
GAATTCGAACACGTAATTTA+AGG 0.220904 1:-71824890 MsG0180004012.01.T01:intron
AGGGAGATTTAGTTGATTTA+GGG 0.237095 1:-71825110 MsG0180004012.01.T01:CDS
TACTTCTGTATGAAACAAAA+AGG 0.253004 1:+71823073 None:intergenic
ACTTCCGTCTTCTGTATATT+TGG 0.259358 1:+71823271 None:intergenic
TCATTGGTTTCTGAAGTTAT+TGG 0.263789 1:-71825945 MsG0180004012.01.T01:CDS
GATACATTATAGGCACAATT+TGG 0.276608 1:+71825798 None:intergenic
CTCAGATCCTTCCGCTACTA+TGG 0.285334 1:+71823419 None:intergenic
CTTGAACAGGGATACATTAT+AGG 0.293983 1:+71825788 None:intergenic
AAGATACAGTTCCCCGTTAC+AGG 0.297918 1:+71823392 None:intergenic
GTCTGCAAGTTCATCATAAT+CGG 0.305478 1:+71823344 None:intergenic
AGATGTGGGCTTCTACTTAA+TGG 0.320037 1:-71825892 MsG0180004012.01.T01:CDS
CTAAGTAACAGTGGTGATTC+AGG 0.332347 1:-71825408 MsG0180004012.01.T01:CDS
CTCTGGGCCCCTTCCGCCTC+CGG 0.337034 1:-71827436 MsG0180004012.01.T01:CDS
TGAATATACGATTCAAAAGT+TGG 0.342615 1:+71825756 None:intergenic
AACACTCATTAACTTCAATA+TGG 0.343218 1:+71825455 None:intergenic
CAAAATTTAAGTTGTTGAAA+AGG 0.351025 1:+71825318 None:intergenic
CCAGGCACATGTAATTTCAT+TGG 0.358963 1:-71825961 MsG0180004012.01.T01:CDS
ATCAAAATCAAATAATTCAT+TGG 0.361632 1:-71825700 MsG0180004012.01.T01:CDS
GACGGTGGTGGTTGCGGTGG+TGG 0.363778 1:+71827581 None:intergenic
TTTGGTGCAGAATATACAAT+AGG 0.367122 1:+71825990 None:intergenic
GGGGAAATATTTGAACCTAA+TGG 0.367523 1:+71823094 None:intergenic
AATCTCGAAAATGTTATTCA+AGG 0.371769 1:-71826288 MsG0180004012.01.T01:CDS
CAAAACAAAAGCCAATCTTT+TGG 0.376066 1:-71825652 MsG0180004012.01.T01:CDS
TTGGATGACCTCTCTTGAAC+AGG 0.377318 1:+71825775 None:intergenic
AAAATTTAAGTTGTTGAAAA+GGG 0.384078 1:+71825319 None:intergenic
ACATGTGCCTGGAATATCTT+TGG 0.384532 1:+71825972 None:intergenic
GTGGTGGTGTCGTTGAGAAT+TGG 0.389846 1:+71827543 None:intergenic
CCCTTCCGCCTCCGGATTCA+CGG 0.389867 1:-71827428 MsG0180004012.01.T01:intron
CATTGAGAATGCATCTTATG+AGG 0.398134 1:-71826235 MsG0180004012.01.T01:CDS
TGCTGATTCATGCCGGGATA+AGG 0.398203 1:-71825589 MsG0180004012.01.T01:CDS
ATCATACAATGAAGTTTGAA+TGG 0.413009 1:+71825290 None:intergenic
GATGTATTCAGCCAAAAGAT+TGG 0.417190 1:+71825641 None:intergenic
CACCATCATGAGAATCTCTC+TGG 0.419431 1:-71827453 MsG0180004012.01.T01:CDS
AGAATTGGATTGGTGGTAGT+AGG 0.421991 1:+71827558 None:intergenic
AGTAGGGACGGTGGTGGTTG+CGG 0.422990 1:+71827575 None:intergenic
GTTTCTGAAGTTATTGGCTC+TGG 0.427726 1:-71825939 MsG0180004012.01.T01:CDS
CGGAAGTATTATAAAATAAG+AGG 0.435164 1:-71823255 MsG0180004012.01.T01:CDS
TCATGTGGCTAGCTTGCATA+TGG 0.444952 1:-71825838 MsG0180004012.01.T01:CDS
CGTGAATCCGGAGGCGGAAG+GGG 0.449191 1:+71827429 None:intergenic
TTGGCGTTTATTCAACCAGC+TGG 0.449519 1:+71823290 None:intergenic
GAGATTTCGTTGTATAAAAG+TGG 0.452635 1:-71825051 MsG0180004012.01.T01:CDS
GATCTGAGGAGACCTGTAAC+GGG 0.459833 1:-71823404 MsG0180004012.01.T01:CDS
AGTGGAGACAACCGTGAATC+CGG 0.464045 1:+71827417 None:intergenic
AACATACTAGTATAACCATT+AGG 0.467473 1:-71823109 MsG0180004012.01.T01:three_prime_UTR
GGTGCAATGTTGCAGAGGGC+TGG 0.483302 1:-71824954 MsG0180004012.01.T01:intron
TGCAGACTTCATTGTGTGTA+GGG 0.491862 1:-71823328 MsG0180004012.01.T01:CDS
CTTTCTCATTAGAGACTGAC+AGG 0.493179 1:+71826111 None:intergenic
CCAATGAAATTACATGTGCC+TGG 0.494379 1:+71825961 None:intergenic
TTCTGCACCAAAGATATTCC+AGG 0.495114 1:-71825979 MsG0180004012.01.T01:CDS
ACATATTTGCTGATTCATGC+CGG 0.496038 1:-71825596 MsG0180004012.01.T01:CDS
GAGAATTTGTCTCAAGATGT+GGG 0.496849 1:-71825906 MsG0180004012.01.T01:CDS
TAGTTGATTTAGGGTCACTC+AGG 0.498228 1:-71825101 MsG0180004012.01.T01:CDS
CCGTGAATCCGGAGGCGGAA+GGG 0.498652 1:+71827428 None:intergenic
GGAGAAGAATTCTTTGAACT+TGG 0.498874 1:+71827488 None:intergenic
TTGTGATGTTGCTAGTGTCC+TGG 0.499841 1:-71826156 MsG0180004012.01.T01:CDS
GAATTGGATTGGTGGTAGTA+GGG 0.504666 1:+71827559 None:intergenic
TCATACAATGAAGTTTGAAT+GGG 0.507010 1:+71825291 None:intergenic
TCAGGTTGCCTGAAAACAAT+GGG 0.507316 1:-71825390 MsG0180004012.01.T01:CDS
AGATTCTCATGATGGTGTAG+AGG 0.509651 1:+71827459 None:intergenic
GACACTAGCAACATCACAAT+GGG 0.510659 1:+71826160 None:intergenic
TGAGAATTTGTCTCAAGATG+TGG 0.513104 1:-71825907 MsG0180004012.01.T01:CDS
GTGCAATGTTGCAGAGGGCT+GGG 0.517108 1:-71824953 MsG0180004012.01.T01:intron
ACTTTCTCTCAAGATGCAGC+TGG 0.519468 1:-71825534 MsG0180004012.01.T01:CDS
GGCGTTGAGTTGATTGAAGA+GGG 0.522038 1:+71827509 None:intergenic
AATACATCAAATATATGAAA+GGG 0.529256 1:-71825626 MsG0180004012.01.T01:CDS
CATATTTGCTGATTCATGCC+GGG 0.529533 1:-71825595 MsG0180004012.01.T01:CDS
TGTTAACATCTATACATACA+TGG 0.530902 1:+71823128 None:intergenic
TTGGTGCAGAATATACAATA+GGG 0.534329 1:+71825991 None:intergenic
TCAAGCAGCAATGCCATGGC+AGG 0.536341 1:+71826014 None:intergenic
AGAATGAGGCAGCCTTATCC+CGG 0.536952 1:+71825577 None:intergenic
GATTCTCATGATGGTGTAGA+GGG 0.541835 1:+71827460 None:intergenic
GGGGTGTATATCTGTAATGA+TGG 0.542180 1:-71825160 MsG0180004012.01.T01:CDS
AGGGACGGTGGTGGTTGCGG+TGG 0.543325 1:+71827578 None:intergenic
GAATACATCAAATATATGAA+AGG 0.543639 1:-71825627 MsG0180004012.01.T01:CDS
TCTGCAAGTTCATCATAATC+GGG 0.543765 1:+71823345 None:intergenic
GAGACTTTGTAGTTTGATTG+CGG 0.544363 1:+71825255 None:intergenic
AAAGTGCACAAGCATCGACT+TGG 0.544922 1:+71825233 None:intergenic
ACTTGGACTCGAACCTGCCA+TGG 0.546845 1:-71826027 MsG0180004012.01.T01:CDS
TTGCAGACTTCATTGTGTGT+AGG 0.550879 1:-71823329 MsG0180004012.01.T01:CDS
CAACATCACAATGGGTGGAT+CGG 0.553296 1:+71826168 None:intergenic
AGGCTCAAAGAAGTTTAAGA+AGG 0.558855 1:-71823235 MsG0180004012.01.T01:CDS
GTGGCTAGCTTGCATATGGA+TGG 0.559240 1:-71825834 MsG0180004012.01.T01:CDS
AGGAGAAAGATTATTCCAGC+TGG 0.565099 1:-71823305 MsG0180004012.01.T01:CDS
AGTTGATTTAGGGTCACTCA+GGG 0.566399 1:-71825100 MsG0180004012.01.T01:CDS
TTTGAATCGTATATTCAGGA+AGG 0.568718 1:-71825750 MsG0180004012.01.T01:CDS
GGTGTCGTTGAGAATTGGAT+TGG 0.571575 1:+71827548 None:intergenic
GACAACCGTGAATCCGGAGG+CGG 0.574993 1:+71827423 None:intergenic
GGTGGTAGTAGGGACGGTGG+TGG 0.575285 1:+71827569 None:intergenic
GAAGAGGGTTTCGCAGAGAG+TGG 0.576649 1:+71827524 None:intergenic
AGTTTAAGAAGGAAAGACTG+TGG 0.578172 1:-71823224 MsG0180004012.01.T01:CDS
CAGAAAGAATTCCATAGTAG+CGG 0.578669 1:-71823430 MsG0180004012.01.T01:CDS
TGGATTGGTGGTAGTAGGGA+CGG 0.579138 1:+71827563 None:intergenic
GCCCAGAGAGATTCTCATGA+TGG 0.579469 1:+71827451 None:intergenic
ACCGTGAATCCGGAGGCGGA+AGG 0.579948 1:+71827427 None:intergenic
AACGCCAAATATACAGAAGA+CGG 0.580361 1:-71823275 MsG0180004012.01.T01:CDS
GTCGTTGAGAATTGGATTGG+TGG 0.584422 1:+71827551 None:intergenic
TTCAGGTTGCCTGAAAACAA+TGG 0.586017 1:-71825391 MsG0180004012.01.T01:CDS
ATGATGGTGTAGAGGGAGAG+TGG 0.591559 1:+71827467 None:intergenic
TGGCGTTGAGTTGATTGAAG+AGG 0.595610 1:+71827508 None:intergenic
ATTGAGAATGCATCTTATGA+GGG 0.596176 1:-71826234 MsG0180004012.01.T01:CDS
CATCTTGAGAGAAAGTTCGA+TGG 0.601455 1:+71825541 None:intergenic
GGATCTGAGGAGACCTGTAA+CGG 0.601874 1:-71823405 MsG0180004012.01.T01:CDS
CAGCTTGTACTCTATTCATG+TGG 0.605050 1:-71825853 MsG0180004012.01.T01:CDS
AGGGTCAAGCAGCAATGCCA+TGG 0.605804 1:+71826010 None:intergenic
AATGAGCGGATATCACCTCC+AGG 0.608588 1:+71826138 None:intergenic
ACCATCATGAGAATCTCTCT+GGG 0.608648 1:-71827452 MsG0180004012.01.T01:CDS
CATAGTAGCGGAAGGATCTG+AGG 0.612969 1:-71823418 MsG0180004012.01.T01:CDS
GATTATGTAATCTAAGAATG+AGG 0.614882 1:+71825563 None:intergenic
AAGAATTCCATAGTAGCGGA+AGG 0.616229 1:-71823426 MsG0180004012.01.T01:CDS
ACTAGCAACATCACAATGGG+TGG 0.627956 1:+71826163 None:intergenic
TTCGTTGTATAAAAGTGGAG+AGG 0.630804 1:-71825046 MsG0180004012.01.T01:intron
ACATCAAATATATGAAAGGG+AGG 0.634190 1:-71825623 MsG0180004012.01.T01:CDS
GATTTAGCAGCATCTTCCAA+CGG 0.638493 1:-71826209 MsG0180004012.01.T01:CDS
AATGTATCCCTGTTCAAGAG+AGG 0.642477 1:-71825783 MsG0180004012.01.T01:CDS
GGACACTAGCAACATCACAA+TGG 0.642680 1:+71826159 None:intergenic
ATTAAGTGTCTAAGTAACAG+TGG 0.647383 1:-71825417 MsG0180004012.01.T01:CDS
GACTGACAGGATAAAATGAG+CGG 0.647710 1:+71826124 None:intergenic
TTTGAAGCGAGGTGATACGA+TGG 0.649849 1:-71823170 MsG0180004012.01.T01:exon
GTTAACATCTATACATACAT+GGG 0.649850 1:+71823129 None:intergenic
GAGGGTTTCGCAGAGAGTGG+TGG 0.651479 1:+71827527 None:intergenic
TCAGACGAGCAAGATTGCAA+TGG 0.661417 1:+71825072 None:intergenic
AGACTTCATTGTGTGTAGGG+AGG 0.662943 1:-71823325 MsG0180004012.01.T01:CDS
GCAGGTTCGAGTCCAAGTTG+AGG 0.666945 1:+71826032 None:intergenic
ATTGGTGGTAGTAGGGACGG+TGG 0.675947 1:+71827566 None:intergenic
TGGATGACCTCTCTTGAACA+GGG 0.677008 1:+71825776 None:intergenic
ACGACACTTCTCATATACAG+TGG 0.678715 1:+71823030 None:intergenic
GGAGACAACCGTGAATCCGG+AGG 0.679066 1:+71827420 None:intergenic
ATCTGAGGAGACCTGTAACG+GGG 0.686629 1:-71823403 MsG0180004012.01.T01:CDS
GTTGATTTAGGGTCACTCAG+GGG 0.687870 1:-71825099 MsG0180004012.01.T01:CDS
TGATGTTGCTAGTGTCCTGG+AGG 0.697723 1:-71826153 MsG0180004012.01.T01:CDS
ATCATATTCATCATGCACAG+AGG 0.726889 1:+71825362 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAATCAGTATATAATT+AGG - Chr1:71823606-71823625 MsG0180004012.01.T01:intron 10.0%
!! ACATATTAGTAAAAAAAAAA+TGG + Chr1:71826798-71826817 None:intergenic 10.0%
!! ATATTAGTAAAAAAAAAATG+GGG + Chr1:71826796-71826815 None:intergenic 10.0%
!! CATATTAGTAAAAAAAAAAT+GGG + Chr1:71826797-71826816 None:intergenic 10.0%
!! TTTCATCTTTATAAATTAAA+AGG + Chr1:71823868-71823887 None:intergenic 10.0%
!! AAATTCATGTTTAATAGAAT+CGG - Chr1:71823470-71823489 MsG0180004012.01.T01:intron 15.0%
!! AATACATCAAATATATGAAA+GGG - Chr1:71824989-71825008 MsG0180004012.01.T01:intron 15.0%
!! AGTCTACTTTATTAAAAATT+TGG + Chr1:71827052-71827071 None:intergenic 15.0%
!! ATCAAAATCAAATAATTCAT+TGG - Chr1:71824915-71824934 MsG0180004012.01.T01:CDS 15.0%
!! GTTTATGTAATTTATATGAT+TGG + Chr1:71826252-71826271 None:intergenic 15.0%
!!! AAAATTTAAGTTGTTGAAAA+GGG + Chr1:71825299-71825318 None:intergenic 15.0%
!!! AAATTTTTAATAAAGTAGAC+TGG - Chr1:71827051-71827070 MsG0180004012.01.T01:intron 15.0%
!!! AATTTTGTTATTGAAAAATG+TGG - Chr1:71826318-71826337 MsG0180004012.01.T01:CDS 15.0%
!!! CTATTTTATTTTTTACCAAA+CGG + Chr1:71823750-71823769 None:intergenic 15.0%
!!! TTTTTCTAATTAAGATTGTA+GGG - Chr1:71823918-71823937 MsG0180004012.01.T01:intron 15.0%
!!! TTTTTTCTAATTAAGATTGT+AGG - Chr1:71823917-71823936 MsG0180004012.01.T01:intron 15.0%
!! ATATTTCATGTCTAAATCAT+TGG - Chr1:71825640-71825659 MsG0180004012.01.T01:CDS 20.0%
!! GAATACATCAAATATATGAA+AGG - Chr1:71824988-71825007 MsG0180004012.01.T01:intron 20.0%
!! GATTCTATTAAACATGAATT+TGG + Chr1:71823471-71823490 None:intergenic 20.0%
!! TCAGTATATAATTAGGATTT+AGG - Chr1:71823613-71823632 MsG0180004012.01.T01:intron 20.0%
!!! AGAAAGAAAATGTTTTTCAT+TGG + Chr1:71826824-71826843 None:intergenic 20.0%
!!! CAAAATTTAAGTTGTTGAAA+AGG + Chr1:71825300-71825319 None:intergenic 20.0%
!!! CTATCTTTAAGTTTTTACAA+TGG - Chr1:71825414-71825433 MsG0180004012.01.T01:CDS 20.0%
!!! TCTATGTTTATTTTTGAAGA+GGG - Chr1:71825486-71825505 MsG0180004012.01.T01:CDS 20.0%
!!! TCTTTTTCATTTCTGATTTT+TGG - Chr1:71826667-71826686 MsG0180004012.01.T01:intron 20.0%
!!! TTAATTCTAATCTTTTCAGT+GGG - Chr1:71826704-71826723 MsG0180004012.01.T01:intron 20.0%
!!! TTTAATTCTAATCTTTTCAG+TGG - Chr1:71826703-71826722 MsG0180004012.01.T01:intron 20.0%
!!! TTTTCTAATTAAGATTGTAG+GGG - Chr1:71823919-71823938 MsG0180004012.01.T01:intron 20.0%
! AAAAACTTGCAATGAAACAA+AGG + Chr1:71824129-71824148 None:intergenic 25.0%
! AAAACTTGCAATGAAACAAA+GGG + Chr1:71824128-71824147 None:intergenic 25.0%
! AACACTCATTAACTTCAATA+TGG + Chr1:71825163-71825182 None:intergenic 25.0%
! AACATACTAGTATAACCATT+AGG - Chr1:71827506-71827525 MsG0180004012.01.T01:CDS 25.0%
! AAGATAGCATTAAAGAGTAA+TGG + Chr1:71827131-71827150 None:intergenic 25.0%
! AATCTCGAAAATGTTATTCA+AGG - Chr1:71824327-71824346 MsG0180004012.01.T01:intron 25.0%
! ACTTCTGTATGAAACAAAAA+GGG + Chr1:71827544-71827563 None:intergenic 25.0%
! AGTATTACTCTTTATTCCAT+TGG - Chr1:71825981-71826000 MsG0180004012.01.T01:CDS 25.0%
! ATCATACAATGAAGTTTGAA+TGG + Chr1:71825328-71825347 None:intergenic 25.0%
! CTGATTCAATTTGTAATGTT+TGG - Chr1:71823822-71823841 MsG0180004012.01.T01:intron 25.0%
! GAACTACAATGAATTTAAGA+GGG - Chr1:71823692-71823711 MsG0180004012.01.T01:intron 25.0%
! GATTATGTAATCTAAGAATG+AGG + Chr1:71825055-71825074 None:intergenic 25.0%
! GTGAATATGATATAATCCAA+TGG + Chr1:71826000-71826019 None:intergenic 25.0%
! GTTAACATCTATACATACAT+GGG + Chr1:71827489-71827508 None:intergenic 25.0%
! TAAAAATGACAGTTACGAAA+AGG - Chr1:71824035-71824054 MsG0180004012.01.T01:intron 25.0%
! TACTTCTGTATGAAACAAAA+AGG + Chr1:71827545-71827564 None:intergenic 25.0%
! TAGTAAAAAAAAAATGGGGA+GGG + Chr1:71826792-71826811 None:intergenic 25.0%
! TCATACAATGAAGTTTGAAT+GGG + Chr1:71825327-71825346 None:intergenic 25.0%
! TGAATATACGATTCAAAAGT+TGG + Chr1:71824862-71824881 None:intergenic 25.0%
! TGATAGTACATATAGAAGAA+AGG + Chr1:71826735-71826754 None:intergenic 25.0%
! TGTTAACATCTATACATACA+TGG + Chr1:71827490-71827509 None:intergenic 25.0%
! TTAGTAAAAAAAAAATGGGG+AGG + Chr1:71826793-71826812 None:intergenic 25.0%
!! AACTTTTGAATCGTATATTC+AGG - Chr1:71824861-71824880 MsG0180004012.01.T01:intron 25.0%
!! ACTAACTTCTTCTTTTCTTA+CGG + Chr1:71823720-71823739 None:intergenic 25.0%
!! ATTTAGAAATTTTCCAGCAT+TGG - Chr1:71826756-71826775 MsG0180004012.01.T01:intron 25.0%
!! TCTTTCTGAAAAACATAAGT+TGG + Chr1:71827173-71827192 None:intergenic 25.0%
!! TTTTAATAAAGTAGACTGGA+TGG - Chr1:71827055-71827074 MsG0180004012.01.T01:intron 25.0%
!! TTTTCTGCTAATAAGATTGT+TGG - Chr1:71823576-71823595 MsG0180004012.01.T01:intron 25.0%
!!! AACTTTGAAATTACTTGCAT+CGG - Chr1:71826052-71826071 MsG0180004012.01.T01:CDS 25.0%
!!! ACTATTTTAATACAGTGAGA+TGG + Chr1:71826606-71826625 None:intergenic 25.0%
!!! AGAAAAGAAGAAGTTAGTTT+TGG - Chr1:71823722-71823741 MsG0180004012.01.T01:intron 25.0%
!!! CGATTTTTGCATACTTTTTA+TGG - Chr1:71826477-71826496 MsG0180004012.01.T01:intron 25.0%
!!! CGGAAGTATTATAAAATAAG+AGG - Chr1:71827360-71827379 MsG0180004012.01.T01:intron 25.0%
!!! CTATTTTAATACAGTGAGAT+GGG + Chr1:71826605-71826624 None:intergenic 25.0%
!!! GTCTATGTTTATTTTTGAAG+AGG - Chr1:71825485-71825504 MsG0180004012.01.T01:CDS 25.0%
!!! TTTTTTTGTTTCAGTTTGAG+TGG - Chr1:71824147-71824166 MsG0180004012.01.T01:intron 25.0%
ACATCAAATATATGAAAGGG+AGG - Chr1:71824992-71825011 MsG0180004012.01.T01:intron 30.0%
ATAAGAAATGTGAGAAAGAG+AGG + Chr1:71826876-71826895 None:intergenic 30.0%
ATTAAGTGTCTAAGTAACAG+TGG - Chr1:71825198-71825217 MsG0180004012.01.T01:CDS 30.0%
ATTGAGAATGCATCTTATGA+GGG - Chr1:71824381-71824400 MsG0180004012.01.T01:intron 30.0%
CACTGTATTAAAATAGTCCT+TGG - Chr1:71826609-71826628 MsG0180004012.01.T01:intron 30.0%
CTTCTGTATGAAACAAAAAG+GGG + Chr1:71827543-71827562 None:intergenic 30.0%
GAATTCGAACACGTAATTTA+AGG - Chr1:71825725-71825744 MsG0180004012.01.T01:CDS 30.0%
GAGATTTCGTTGTATAAAAG+TGG - Chr1:71825564-71825583 MsG0180004012.01.T01:CDS 30.0%
GATACATTATAGGCACAATT+TGG + Chr1:71824820-71824839 None:intergenic 30.0%
GGAACTACAATGAATTTAAG+AGG - Chr1:71823691-71823710 MsG0180004012.01.T01:intron 30.0%
GTATTGTGTCTAATTCTATG+TGG - Chr1:71825751-71825770 MsG0180004012.01.T01:CDS 30.0%
TTGGTGCAGAATATACAATA+GGG + Chr1:71824627-71824646 None:intergenic 30.0%
TTTGAATCGTATATTCAGGA+AGG - Chr1:71824865-71824884 MsG0180004012.01.T01:intron 30.0%
! AGGGAGATTTAGTTGATTTA+GGG - Chr1:71825505-71825524 MsG0180004012.01.T01:CDS 30.0%
! ATCATAATCGGGTACATTTT+TGG + Chr1:71827262-71827281 None:intergenic 30.0%
! CAAAACAAAAGCCAATCTTT+TGG - Chr1:71824963-71824982 MsG0180004012.01.T01:intron 30.0%
! CATAATGATACTTTTCTGCA+GGG + Chr1:71826226-71826245 None:intergenic 30.0%
! GATTTTAGATTTCCTCAACT+TGG - Chr1:71824571-71824590 MsG0180004012.01.T01:intron 30.0%
! TTTGGTGCAGAATATACAAT+AGG + Chr1:71824628-71824647 None:intergenic 30.0%
!! ATAAGTTGGTTTAGAGTCTT+TGG + Chr1:71827159-71827178 None:intergenic 30.0%
!! TCATTGGTTTCTGAAGTTAT+TGG - Chr1:71824670-71824689 MsG0180004012.01.T01:intron 30.0%
!! TTTCACTTTTCTTGCAACTT+GGG - Chr1:71826020-71826039 MsG0180004012.01.T01:CDS 30.0%
!!! ATTAGTAAGATTTTGAAGCG+AGG - Chr1:71827434-71827453 MsG0180004012.01.T01:CDS 30.0%
!!! CAAAAGATTGGCTTTTGTTT+TGG + Chr1:71824965-71824984 None:intergenic 30.0%
!!! CATGCTTGTTTTGAGAAATT+GGG - Chr1:71826349-71826368 MsG0180004012.01.T01:CDS 30.0%
AAAGTGGCATACACTAGTTA+AGG - Chr1:71826283-71826302 MsG0180004012.01.T01:CDS 35.0%
AACGCCAAATATACAGAAGA+CGG - Chr1:71827340-71827359 MsG0180004012.01.T01:intron 35.0%
AAGACGTAAACTTGAGCTTA+TGG + Chr1:71824095-71824114 None:intergenic 35.0%
AATGAAACAAAGGGTCTGTT+TGG + Chr1:71824119-71824138 None:intergenic 35.0%
ACTTCCGTCTTCTGTATATT+TGG + Chr1:71827347-71827366 None:intergenic 35.0%
AGAGAAAGATGTTCAACAAG+TGG + Chr1:71823219-71823238 None:intergenic 35.0%
AGGCTCAAAGAAGTTTAAGA+AGG - Chr1:71827380-71827399 MsG0180004012.01.T01:intron 35.0%
AGTTTAAGAAGGAAAGACTG+TGG - Chr1:71827391-71827410 MsG0180004012.01.T01:intron 35.0%
ATCATATTCATCATGCACAG+AGG + Chr1:71825256-71825275 None:intergenic 35.0%
CAGAAAGAATTCCATAGTAG+CGG - Chr1:71827185-71827204 MsG0180004012.01.T01:intron 35.0%
CATTGAGAATGCATCTTATG+AGG - Chr1:71824380-71824399 MsG0180004012.01.T01:intron 35.0%
CTTGAACAGGGATACATTAT+AGG + Chr1:71824830-71824849 None:intergenic 35.0%
GAGAATTTGTCTCAAGATGT+GGG - Chr1:71824709-71824728 MsG0180004012.01.T01:intron 35.0%
GAGACTTTGTAGTTTGATTG+CGG + Chr1:71825363-71825382 None:intergenic 35.0%
GATGTATTCAGCCAAAAGAT+TGG + Chr1:71824977-71824996 None:intergenic 35.0%
GGAGAAGAATTCTTTGAACT+TGG + Chr1:71823130-71823149 None:intergenic 35.0%
GGGGAAATATTTGAACCTAA+TGG + Chr1:71827524-71827543 None:intergenic 35.0%
GTCTGCAAGTTCATCATAAT+CGG + Chr1:71827274-71827293 None:intergenic 35.0%
TAAACCTTGCTGAGATAAAG+TGG - Chr1:71826267-71826286 MsG0180004012.01.T01:CDS 35.0%
TAGTAAGGGAATACACTTGT+GGG - Chr1:71825881-71825900 MsG0180004012.01.T01:CDS 35.0%
TCTGCAAGTTCATCATAATC+GGG + Chr1:71827273-71827292 None:intergenic 35.0%
TGAGAATGATGAGAATGAAG+CGG + Chr1:71823311-71823330 None:intergenic 35.0%
TGAGAATTTGTCTCAAGATG+TGG - Chr1:71824708-71824727 MsG0180004012.01.T01:intron 35.0%
TGCAGGGTAGATAAAAGTTA+GGG + Chr1:71826210-71826229 None:intergenic 35.0%
TGCTCAAATGGTACTAGTAA+GGG - Chr1:71825867-71825886 MsG0180004012.01.T01:CDS 35.0%
TGTAGAAGTCTTCTAGTGTT+TGG - Chr1:71823670-71823689 MsG0180004012.01.T01:intron 35.0%
TTCGTTGTATAAAAGTGGAG+AGG - Chr1:71825569-71825588 MsG0180004012.01.T01:CDS 35.0%
TTGCTCAAATGGTACTAGTA+AGG - Chr1:71825866-71825885 MsG0180004012.01.T01:CDS 35.0%
TTTCTCGAATACCTGTCAAA+AGG - Chr1:71826112-71826131 MsG0180004012.01.T01:CDS 35.0%
! ATTTGTTGATGAGGAATTCC+TGG + Chr1:71823287-71823306 None:intergenic 35.0%
! GAGGGAGATTTAGTTGATTT+AGG - Chr1:71825504-71825523 MsG0180004012.01.T01:CDS 35.0%
! GCATAATGATACTTTTCTGC+AGG + Chr1:71826227-71826246 None:intergenic 35.0%
!! ACATATTTGCTGATTCATGC+CGG - Chr1:71825019-71825038 MsG0180004012.01.T01:intron 35.0%
!! CTTTCACTTTTCTTGCAACT+TGG - Chr1:71826019-71826038 MsG0180004012.01.T01:CDS 35.0%
!! GGGTTTTATCTGTGATTTTG+AGG - Chr1:71826088-71826107 MsG0180004012.01.T01:CDS 35.0%
!! TAATGCTTTGTTTGCTTGTG+AGG + Chr1:71826944-71826963 None:intergenic 35.0%
!! TTCACTTTTCTTGCAACTTG+GGG - Chr1:71826021-71826040 MsG0180004012.01.T01:CDS 35.0%
!!! ATGGTTTTGATGTGTTAGCA+AGG - Chr1:71825433-71825452 MsG0180004012.01.T01:CDS 35.0%
!!! GCATGCTTGTTTTGAGAAAT+TGG - Chr1:71826348-71826367 MsG0180004012.01.T01:CDS 35.0%
!!! TGGTTTTGATGTGTTAGCAA+GGG - Chr1:71825434-71825453 MsG0180004012.01.T01:CDS 35.0%
AAAGTTGCGAAGTAGAAGGA+CGG + Chr1:71823379-71823398 None:intergenic 40.0%
AATACCTGTCAAAAGGTCCA+GGG - Chr1:71826119-71826138 MsG0180004012.01.T01:CDS 40.0%
AATGTATCCCTGTTCAAGAG+AGG - Chr1:71824832-71824851 MsG0180004012.01.T01:intron 40.0%
ACATGTGCCTGGAATATCTT+TGG + Chr1:71824646-71824665 None:intergenic 40.0%
ACCATCATGAGAATCTCTCT+GGG - Chr1:71823163-71823182 MsG0180004012.01.T01:three_prime_UTR 40.0%
ACGACACTTCTCATATACAG+TGG + Chr1:71827588-71827607 None:intergenic 40.0%
AGAGAAAGTTGCGAAGTAGA+AGG + Chr1:71823383-71823402 None:intergenic 40.0%
AGATGTGGGCTTCTACTTAA+TGG - Chr1:71824723-71824742 MsG0180004012.01.T01:intron 40.0%
AGGAGAAAGATTATTCCAGC+TGG - Chr1:71827310-71827329 MsG0180004012.01.T01:intron 40.0%
AGGGTAGATAAAAGTTAGGG+AGG + Chr1:71826207-71826226 None:intergenic 40.0%
AGTAAGGGAATACACTTGTG+GGG - Chr1:71825882-71825901 MsG0180004012.01.T01:CDS 40.0%
AGTGATATCGATAGAGAGGA+AGG + Chr1:71823337-71823356 None:intergenic 40.0%
AGTGGACATCGATGTGATAT+TGG - Chr1:71824165-71824184 MsG0180004012.01.T01:intron 40.0%
AGTTACAGCGGTTGCATAAA+AGG + Chr1:71826165-71826184 None:intergenic 40.0%
ATGAAAGAACACGAGACTTC+AGG + Chr1:71825934-71825953 None:intergenic 40.0%
CACTGACAGAAATTAAACCC+TGG + Chr1:71826139-71826158 None:intergenic 40.0%
CAGCTTGTACTCTATTCATG+TGG - Chr1:71824762-71824781 MsG0180004012.01.T01:intron 40.0%
CATCTTGAGAGAAAGTTCGA+TGG + Chr1:71825077-71825096 None:intergenic 40.0%
CCAATGAAATTACATGTGCC+TGG + Chr1:71824657-71824676 None:intergenic 40.0%
CCAGGCACATGTAATTTCAT+TGG - Chr1:71824654-71824673 MsG0180004012.01.T01:intron 40.0%
CTAAGTAACAGTGGTGATTC+AGG - Chr1:71825207-71825226 MsG0180004012.01.T01:CDS 40.0%
CTAGTAAGGGAATACACTTG+TGG - Chr1:71825880-71825899 MsG0180004012.01.T01:CDS 40.0%
CTGCAGGGTAGATAAAAGTT+AGG + Chr1:71826211-71826230 None:intergenic 40.0%
CTGGCAGTGATAATCAACAA+GGG + Chr1:71826555-71826574 None:intergenic 40.0%
CTTTCTCATTAGAGACTGAC+AGG + Chr1:71824507-71824526 None:intergenic 40.0%
GACACTAGCAACATCACAAT+GGG + Chr1:71824458-71824477 None:intergenic 40.0%
GACTGACAGGATAAAATGAG+CGG + Chr1:71824494-71824513 None:intergenic 40.0%
GATTATCACTGCCAGAAGAA+AGG - Chr1:71826560-71826579 MsG0180004012.01.T01:intron 40.0%
GATTTAGCAGCATCTTCCAA+CGG - Chr1:71824406-71824425 MsG0180004012.01.T01:intron 40.0%
GGGGTGTATATCTGTAATGA+TGG - Chr1:71825455-71825474 MsG0180004012.01.T01:CDS 40.0%
GGGTAGATAAAAGTTAGGGA+GGG + Chr1:71826206-71826225 None:intergenic 40.0%
GGTAGATAAAAGTTAGGGAG+GGG + Chr1:71826205-71826224 None:intergenic 40.0%
GTTACAGCGGTTGCATAAAA+GGG + Chr1:71826164-71826183 None:intergenic 40.0%
TAGTACCATTTGAGCAAGCA+CGG + Chr1:71825863-71825882 None:intergenic 40.0%
TCTGGCAGTGATAATCAACA+AGG + Chr1:71826556-71826575 None:intergenic 40.0%
TGCAGACTTCATTGTGTGTA+GGG - Chr1:71827287-71827306 MsG0180004012.01.T01:intron 40.0%
TTATGCAACCGCTGTAACTT+CGG - Chr1:71826166-71826185 MsG0180004012.01.T01:CDS 40.0%
TTCTGCACCAAAGATATTCC+AGG - Chr1:71824636-71824655 MsG0180004012.01.T01:intron 40.0%
TTGAGAAATTGGGATGAGAG+AGG - Chr1:71826359-71826378 MsG0180004012.01.T01:CDS 40.0%
TTGCAGACTTCATTGTGTGT+AGG - Chr1:71827286-71827305 MsG0180004012.01.T01:intron 40.0%
TTGCTTGTGAGGAAAAAGTG+AGG + Chr1:71826933-71826952 None:intergenic 40.0%
! AAGAATTCCATAGTAGCGGA+AGG - Chr1:71827189-71827208 MsG0180004012.01.T01:intron 40.0%
! AGATTCTCATGATGGTGTAG+AGG + Chr1:71823159-71823178 None:intergenic 40.0%
! AGGAACTTCCCATTGTTTTC+AGG + Chr1:71825236-71825255 None:intergenic 40.0%
! AGTTGATTTAGGGTCACTCA+GGG - Chr1:71825515-71825534 MsG0180004012.01.T01:CDS 40.0%
! CACAAACATCTTTTCACCGT+TGG + Chr1:71824425-71824444 None:intergenic 40.0%
! CAGGGTTTAATTTCTGTCAG+TGG - Chr1:71826137-71826156 MsG0180004012.01.T01:CDS 40.0%
! GATGAGAGAGGTACAAAAGA+GGG - Chr1:71826371-71826390 MsG0180004012.01.T01:intron 40.0%
! GATTCTCATGATGGTGTAGA+GGG + Chr1:71823158-71823177 None:intergenic 40.0%
! TAGTTGATTTAGGGTCACTC+AGG - Chr1:71825514-71825533 MsG0180004012.01.T01:CDS 40.0%
! TCAGGTTGCCTGAAAACAAT+GGG - Chr1:71825225-71825244 MsG0180004012.01.T01:CDS 40.0%
! TTCTAGAGACACTCAATCCA+AGG + Chr1:71826629-71826648 None:intergenic 40.0%
!! AGAATTGGATTGGTGGTAGT+AGG + Chr1:71823060-71823079 None:intergenic 40.0%
!! CATATTTGCTGATTCATGCC+GGG - Chr1:71825020-71825039 MsG0180004012.01.T01:intron 40.0%
!! GAATTGGATTGGTGGTAGTA+GGG + Chr1:71823059-71823078 None:intergenic 40.0%
!! GGTTTTGATGTGTTAGCAAG+GGG - Chr1:71825435-71825454 MsG0180004012.01.T01:CDS 40.0%
!! GTTTCTGAAGTTATTGGCTC+TGG - Chr1:71824676-71824695 MsG0180004012.01.T01:intron 40.0%
!! GTTTTGATGTGTTAGCAAGG+GGG - Chr1:71825436-71825455 MsG0180004012.01.T01:CDS 40.0%
!! TATGCCACTTTATCTCAGCA+AGG + Chr1:71826274-71826293 None:intergenic 40.0%
!! TGCATCGGCTTGTTAAACTT+GGG - Chr1:71826067-71826086 MsG0180004012.01.T01:CDS 40.0%
!! TTCAGGTTGCCTGAAAACAA+TGG - Chr1:71825224-71825243 MsG0180004012.01.T01:CDS 40.0%
!! TTGCATCGGCTTGTTAAACT+TGG - Chr1:71826066-71826085 MsG0180004012.01.T01:CDS 40.0%
!!! AAGTTAGTTTTGGCTCCGTT+TGG - Chr1:71823732-71823751 MsG0180004012.01.T01:intron 40.0%
AAGATACAGTTCCCCGTTAC+AGG + Chr1:71827226-71827245 None:intergenic 45.0%
ACTAGCAACATCACAATGGG+TGG + Chr1:71824455-71824474 None:intergenic 45.0%
ACTTTCTCTCAAGATGCAGC+TGG - Chr1:71825081-71825100 MsG0180004012.01.T01:CDS 45.0%
AGACTTCATTGTGTGTAGGG+AGG - Chr1:71827290-71827309 MsG0180004012.01.T01:intron 45.0%
AGATAAAAGTTAGGGAGGGG+AGG + Chr1:71826202-71826221 None:intergenic 45.0%
AGGAATTCCTGGTCGGAAAA+GGG + Chr1:71823276-71823295 None:intergenic 45.0%
AGTACCATTTGAGCAAGCAC+GGG + Chr1:71825862-71825881 None:intergenic 45.0%
ATTTGGTCCTACCTCAAGCA+CGG + Chr1:71823454-71823473 None:intergenic 45.0%
CAACATCACAATGGGTGGAT+CGG + Chr1:71824450-71824469 None:intergenic 45.0%
CACCATCATGAGAATCTCTC+TGG - Chr1:71823162-71823181 MsG0180004012.01.T01:three_prime_UTR 45.0%
CATTGGTGCAATGTTGCAGA+GGG - Chr1:71825657-71825676 MsG0180004012.01.T01:CDS 45.0%
GAATACCTGTCAAAAGGTCC+AGG - Chr1:71826118-71826137 MsG0180004012.01.T01:CDS 45.0%
GACGGTAAGAATCAGAGAGT+TGG + Chr1:71823419-71823438 None:intergenic 45.0%
GCTGAGTGATATCGATAGAG+AGG + Chr1:71823341-71823360 None:intergenic 45.0%
GGACACTAGCAACATCACAA+TGG + Chr1:71824459-71824478 None:intergenic 45.0%
GGGATCTTTGAATCCAATGC+TGG + Chr1:71826772-71826791 None:intergenic 45.0%
TAGAAGGACGGTTGTTCCAT+CGG + Chr1:71823367-71823386 None:intergenic 45.0%
TCAAGCACGGTACAGAGAAA+GGG + Chr1:71823441-71823460 None:intergenic 45.0%
TCAGACGAGCAAGATTGCAA+TGG + Chr1:71825546-71825565 None:intergenic 45.0%
TCATTGGTGCAATGTTGCAG+AGG - Chr1:71825656-71825675 MsG0180004012.01.T01:CDS 45.0%
TGGATGACCTCTCTTGAACA+GGG + Chr1:71824842-71824861 None:intergenic 45.0%
TTGGATGACCTCTCTTGAAC+AGG + Chr1:71824843-71824862 None:intergenic 45.0%
TTGGCGTTTATTCAACCAGC+TGG + Chr1:71827328-71827347 None:intergenic 45.0%
TTGTGATGTTGCTAGTGTCC+TGG - Chr1:71824459-71824478 MsG0180004012.01.T01:intron 45.0%
! GGATGAGAGAGGTACAAAAG+AGG - Chr1:71826370-71826389 MsG0180004012.01.T01:intron 45.0%
! GTCGTTGAGAATTGGATTGG+TGG + Chr1:71823067-71823086 None:intergenic 45.0%
! GTTGATGAGGAATTCCTGGT+CGG + Chr1:71823283-71823302 None:intergenic 45.0%
! GTTGATTTAGGGTCACTCAG+GGG - Chr1:71825516-71825535 MsG0180004012.01.T01:CDS 45.0%
! TAAACCCTGGACCTTTTGAC+AGG + Chr1:71826126-71826145 None:intergenic 45.0%
! TCGATGCTTGTGCACTTTTC+AGG - Chr1:71825387-71825406 MsG0180004012.01.T01:CDS 45.0%
! TGAAGCGGCATTTGTTGATG+AGG + Chr1:71823296-71823315 None:intergenic 45.0%
! TTTGAAGCGAGGTGATACGA+TGG - Chr1:71827445-71827464 MsG0180004012.01.T01:CDS 45.0%
!! AAAGTGCACAAGCATCGACT+TGG + Chr1:71825385-71825404 None:intergenic 45.0%
!! GCATCGGCTTGTTAAACTTG+GGG - Chr1:71826068-71826087 MsG0180004012.01.T01:CDS 45.0%
!! GGCGTTGAGTTGATTGAAGA+GGG + Chr1:71823109-71823128 None:intergenic 45.0%
!! GGCTTTCTCCTGATTGGTTT+AGG - Chr1:71826412-71826431 MsG0180004012.01.T01:intron 45.0%
!! GGTGTCGTTGAGAATTGGAT+TGG + Chr1:71823070-71823089 None:intergenic 45.0%
!! TCATGTGGCTAGCTTGCATA+TGG - Chr1:71824777-71824796 MsG0180004012.01.T01:intron 45.0%
!! TGGCGTTGAGTTGATTGAAG+AGG + Chr1:71823110-71823129 None:intergenic 45.0%
AATGAGCGGATATCACCTCC+AGG + Chr1:71824480-71824499 None:intergenic 50.0%
ACACGCGAGTTCCTTTCTTC+TGG + Chr1:71826574-71826593 None:intergenic 50.0%
ACCGCTGTAACTTCGGAATG+TGG - Chr1:71826173-71826192 MsG0180004012.01.T01:CDS 50.0%
AGGGAAGAAGCGAAGAGAGA+TGG - Chr1:71826390-71826409 MsG0180004012.01.T01:intron 50.0%
AGTGGAGACAACCGTGAATC+CGG + Chr1:71823201-71823220 None:intergenic 50.0%
ATCTGAGGAGACCTGTAACG+GGG - Chr1:71827212-71827231 MsG0180004012.01.T01:intron 50.0%
CTCAAGCACGGTACAGAGAA+AGG + Chr1:71823442-71823461 None:intergenic 50.0%
CTCAGATCCTTCCGCTACTA+TGG + Chr1:71827199-71827218 None:intergenic 50.0%
CTTTCTCTGTACCGTGCTTG+AGG - Chr1:71823440-71823459 MsG0180004012.01.T01:intron 50.0%
GAGGAATTCCTGGTCGGAAA+AGG + Chr1:71823277-71823296 None:intergenic 50.0%
GATATCACTCAGCTCACCGA+TGG - Chr1:71823348-71823367 MsG0180004012.01.T01:CDS 50.0%
GATCTGAGGAGACCTGTAAC+GGG - Chr1:71827211-71827230 MsG0180004012.01.T01:intron 50.0%
GCAGATCGCCTAAACCAATC+AGG + Chr1:71826423-71826442 None:intergenic 50.0%
GCCACATTCCGAAGTTACAG+CGG + Chr1:71826177-71826196 None:intergenic 50.0%
GCCCAGAGAGATTCTCATGA+TGG + Chr1:71823167-71823186 None:intergenic 50.0%
GGATCTGAGGAGACCTGTAA+CGG - Chr1:71827210-71827229 MsG0180004012.01.T01:intron 50.0%
GGGAAGAAGCGAAGAGAGAT+GGG - Chr1:71826391-71826410 MsG0180004012.01.T01:intron 50.0%
GTGTCAGAACAACGAGAGAG+CGG + Chr1:71823251-71823270 None:intergenic 50.0%
TGATGTTGCTAGTGTCCTGG+AGG - Chr1:71824462-71824481 MsG0180004012.01.T01:intron 50.0%
! AGAATGAGGCAGCCTTATCC+CGG + Chr1:71825041-71825060 None:intergenic 50.0%
! ATGATGGTGTAGAGGGAGAG+TGG + Chr1:71823151-71823170 None:intergenic 50.0%
! CATAGTAGCGGAAGGATCTG+AGG - Chr1:71827197-71827216 MsG0180004012.01.T01:intron 50.0%
! GAGATGGGCTTTCTCCTGAT+TGG - Chr1:71826406-71826425 MsG0180004012.01.T01:intron 50.0%
!! GTGGCTAGCTTGCATATGGA+TGG - Chr1:71824781-71824800 MsG0180004012.01.T01:intron 50.0%
!! GTGGTGGTGTCGTTGAGAAT+TGG + Chr1:71823075-71823094 None:intergenic 50.0%
!! TGCTGATTCATGCCGGGATA+AGG - Chr1:71825026-71825045 MsG0180004012.01.T01:intron 50.0%
!! TGGATTGGTGGTAGTAGGGA+CGG + Chr1:71823055-71823074 None:intergenic 50.0%
ACTTGGACTCGAACCTGCCA+TGG - Chr1:71824588-71824607 MsG0180004012.01.T01:intron 55.0%
AGGGTCAAGCAGCAATGCCA+TGG + Chr1:71824608-71824627 None:intergenic 55.0%
CTCTGTACCGTGCTTGAGGT+AGG - Chr1:71823444-71823463 MsG0180004012.01.T01:intron 55.0%
GAAGAGGGTTTCGCAGAGAG+TGG + Chr1:71823094-71823113 None:intergenic 55.0%
GCAACCCGTGCTTGCTCAAA+TGG - Chr1:71825855-71825874 MsG0180004012.01.T01:CDS 55.0%
GCACGGTACAGAGAAAGGGA+CGG + Chr1:71823437-71823456 None:intergenic 55.0%
GCAGGTTCGAGTCCAAGTTG+AGG + Chr1:71824586-71824605 None:intergenic 55.0%
GTGCAATGTTGCAGAGGGCT+GGG - Chr1:71825662-71825681 MsG0180004012.01.T01:CDS 55.0%
TCAAGCAGCAATGCCATGGC+AGG + Chr1:71824604-71824623 None:intergenic 55.0%
! AAGCACGGGTTGCTGGTGAA+GGG + Chr1:71825848-71825867 None:intergenic 55.0%
! ATTGGTGGTAGTAGGGACGG+TGG + Chr1:71823052-71823071 None:intergenic 55.0%
! GACACTTCCCTTTTCCGACC+AGG - Chr1:71823266-71823285 MsG0180004012.01.T01:CDS 55.0%
! TTTGAGCAAGCACGGGTTGC+TGG + Chr1:71825855-71825874 None:intergenic 55.0%
GACAACCGTGAATCCGGAGG+CGG + Chr1:71823195-71823214 None:intergenic 60.0%
GAGGGTTTCGCAGAGAGTGG+TGG + Chr1:71823091-71823110 None:intergenic 60.0%
GGAGACAACCGTGAATCCGG+AGG + Chr1:71823198-71823217 None:intergenic 60.0%
GGTGCAATGTTGCAGAGGGC+TGG - Chr1:71825661-71825680 MsG0180004012.01.T01:CDS 60.0%
! AGTAGGGACGGTGGTGGTTG+CGG + Chr1:71823043-71823062 None:intergenic 60.0%
! CAAGCACGGGTTGCTGGTGA+AGG + Chr1:71825849-71825868 None:intergenic 60.0%
ACCGTGAATCCGGAGGCGGA+AGG + Chr1:71823191-71823210 None:intergenic 65.0%
CCCTTCCGCCTCCGGATTCA+CGG - Chr1:71823187-71823206 MsG0180004012.01.T01:exon 65.0%
CCGTGAATCCGGAGGCGGAA+GGG + Chr1:71823190-71823209 None:intergenic 65.0%
CGTGAATCCGGAGGCGGAAG+GGG + Chr1:71823189-71823208 None:intergenic 65.0%
GGTGGTAGTAGGGACGGTGG+TGG + Chr1:71823049-71823068 None:intergenic 65.0%
! AGGGACGGTGGTGGTTGCGG+TGG + Chr1:71823040-71823059 None:intergenic 70.0%
! GACGGTGGTGGTTGCGGTGG+TGG + Chr1:71823037-71823056 None:intergenic 70.0%
CTCTGGGCCCCTTCCGCCTC+CGG - Chr1:71823179-71823198 MsG0180004012.01.T01:exon 75.0%
Chromosome Type Strat End Strand Name
Chr1 gene 71823024 71827613 71823024 ID=MsG0180004012.01;Name=MsG0180004012.01
Chr1 mRNA 71823024 71827613 71823024 ID=MsG0180004012.01.T01;Parent=MsG0180004012.01;Name=MsG0180004012.01.T01;_AED=0.41;_eAED=0.44;_QI=0|0.66|0.5|1|1|1|4|164|617
Chr1 exon 71823024 71823449 71823024 ID=MsG0180004012.01.T01:exon:30967;Parent=MsG0180004012.01.T01
Chr1 exon 71824891 71824961 71824891 ID=MsG0180004012.01.T01:exon:30966;Parent=MsG0180004012.01.T01
Chr1 exon 71825047 71826382 71825047 ID=MsG0180004012.01.T01:exon:30965;Parent=MsG0180004012.01.T01
Chr1 exon 71827429 71827613 71827429 ID=MsG0180004012.01.T01:exon:30964;Parent=MsG0180004012.01.T01
Chr1 CDS 71827429 71827613 71827429 ID=MsG0180004012.01.T01:cds;Parent=MsG0180004012.01.T01
Chr1 CDS 71825047 71826382 71825047 ID=MsG0180004012.01.T01:cds;Parent=MsG0180004012.01.T01
Chr1 CDS 71824891 71824961 71824891 ID=MsG0180004012.01.T01:cds;Parent=MsG0180004012.01.T01
Chr1 CDS 71823188 71823449 71823188 ID=MsG0180004012.01.T01:cds;Parent=MsG0180004012.01.T01
Chr1 three_prime_UTR 71823024 71823187 71823024 ID=MsG0180004012.01.T01:three_prime_utr;Parent=MsG0180004012.01.T01
Gene Sequence

>MsG0180004012.01.T01

ATGGACGAAACCACCACCGCAACCACCACCGTCCCTACTACCACCAATCCAATTCTCAACGACACCACCACTCTCTGCGAAACCCTCTTCAATCAACTCAACGCCAAGTTCAAAGAATTCTTCTCCACTCTCCCTCTACACCATCATGAGAATCTCTCTGGGCCCCTTCCGCCTCCGGATTCACGTATGCTTAGTTCTGTGTATTTTATACGATATTATGTGTATACGATTCTTACTAGAGTTGTATTCGCTCATCTAATCTCGAAAATGTTATTCAAGGTTTTTGCAGATGAACTTTTAAGACATCAATCATTGAGAATGCATCTTATGAGGGCTGATTTAGCAGCATCTTCCAACGGTGAAAAGATGTTTGTGTGCCGATCCACCCATTGTGATGTTGCTAGTGTCCTGGAGGTGATATCCGCTCATTTTATCCTGTCAGTCTCTAATGAGAAAGCATTTGAGAATTTCATCAGCAGATTATGTTTACATTGCGACAAAGATTTTAGATTTCCTCAACTTGGACTCGAACCTGCCATGGCATTGCTGCTTGACCCTATTGTATATTCTGCACCAAAGATATTCCAGGCACATGTAATTTCATTGGTTTCTGAAGTTATTGGCTCTGGCGTATCTTCTGAGAATTTGTCTCAAGATGTGGGCTTCTACTTAATGGCATTTCACAAATCTGTCAGCTTGTACTCTATTCATGTGGCTAGCTTGCATATGGATGGTTTTTACATCGAACCAAATTGTGCCTATAATGTATCCCTGTTCAAGAGAGGTCATCCAACTTTTGAATCGTATATTCAGGAAGGAACAAGTAACAGATTAAATCAAATCTTATCAAAATCAAATAATTCATTGGACTCTTTTCAGTGCAAAATGTCATCCAAAACAAAAGCCAATCTTTTGGCTGAATACATCAAATATATGAAAGGGAGGCAGTACATATTTGCTGATTCATGCCGGGATAAGGCTGCCTCATTCTTAGATTACATAATCCATCGAACTTTCTCTCAAGATGCAGCTGGAGATGTATTGTATGTAAAGCAAAATACTAGTGCTGAAGACATTTCTCTTCTTGCGTCCATATTGAAGTTAATGAGTGTTTCGCTGTTACTTGCAATTAAGTGTCTAAGTAACAGTGGTGATTCAGGTTGCCTGAAAACAATGGGAAGTTCCTCTGTGCATGATGAATATGATTTCTTGATCAGCATCATCAACCCTTTTCAACAACTTAAATTTTGTTTACCCATTCAAACTTCATTGTATGATATGATGAAAAATCCGCAATCAAACTACAAAGTCTCCAAGTCGATGCTTGTGCACTTTTCAGGCTTGCTATCTTTAAGTTTTTACAATGGTTTTGATGTGTTAGCAAGGGGGTGTATATCTGTAATGATGGCACTGATGTCTATGTTTATTTTTGAAGAGGGAGATTTAGTTGATTTAGGGTCACTCAGGGGTCTGCCATTGCAATCTTGCTCGTCTGAGATTTCGTTGTATAAAAGTGGAGAGAGGGCTGGGATAAAACAACGTATGCATAAAATTGCAGCAGAGTTTAGTAGAATTCGAACACGTAATTTAAGAAAGAATTCCATAGTAGCGGAAGGATCTGAGGAGACCTGTAACGGGGAACTGTATCTTGATTGCACATTATCCAAAAATGTACCCGATTATGATGAACTTGCAGACTTCATTGTGTGTAGGGAGGAGAAAGATTATTCCAGCTGGTTGAATAAACGCCAAATATACAGAAGACGGAAGTATTATAAAATAAGAGGCTCAAAGAAGTTTAAGAAGGAAAGACTGTGGAAGTCTTTGAGATTGAGAAAATTAGTAAGATTTTGA
Protein sequence

>MsG0180004012.01.T01

MDETTTATTTVPTTTNPILNDTTTLCETLFNQLNAKFKEFFSTLPLHHHENLSGPLPPPDSRMLSSVYFIRYYVYTILTRVVFAHLISKMLFKVFADELLRHQSLRMHLMRADLAASSNGEKMFVCRSTHCDVASVLEVISAHFILSVSNEKAFENFISRLCLHCDKDFRFPQLGLEPAMALLLDPIVYSAPKIFQAHVISLVSEVIGSGVSSENLSQDVGFYLMAFHKSVSLYSIHVASLHMDGFYIEPNCAYNVSLFKRGHPTFESYIQEGTSNRLNQILSKSNNSLDSFQCKMSSKTKANLLAEYIKYMKGRQYIFADSCRDKAASFLDYIIHRTFSQDAAGDVLYVKQNTSAEDISLLASILKLMSVSLLLAIKCLSNSGDSGCLKTMGSSSVHDEYDFLISIINPFQQLKFCLPIQTSLYDMMKNPQSNYKVSKSMLVHFSGLLSLSFYNGFDVLARGCISVMMALMSMFIFEEGDLVDLGSLRGLPLQSCSSEISLYKSGERAGIKQRMHKIAAEFSRIRTRNLRKNSIVAEGSEETCNGELYLDCTLSKNVPDYDELADFIVCREEKDYSSWLNKRQIYRRRKYYKIRGSKKFKKERLWKSLRLRKLVRF*