Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004066.01.T01 | XP_013468670.1 | 96.154 | 312 | 12 | 0 | 1 | 312 | 1 | 312 | 0 | 612 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004066.01.T01 | Q9FL41 | 43.322 | 307 | 162 | 4 | 16 | 312 | 17 | 321 | 1.17E-77 | 245 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004066.01.T01 | A0A072VLI8 | 96.154 | 312 | 12 | 0 | 1 | 312 | 1 | 312 | 0.0 | 612 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180000292.01 | MsG0180004066.01 | 0.800572 | 1.353400e-48 | 6.323248e-46 |
| MsG0180004066.01 | MsG0280011248.01 | 0.803313 | 3.700506e-49 | 1.853553e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004066.01.T01 | MTR_1g073990 | 96.154 | 312 | 12 | 0 | 1 | 312 | 1 | 312 | 0.0 | 612 |
| MsG0180004066.01.T01 | MTR_1g074070 | 86.538 | 312 | 41 | 1 | 1 | 312 | 1 | 311 | 0.0 | 559 |
| MsG0180004066.01.T01 | MTR_1g074120 | 80.449 | 312 | 60 | 1 | 1 | 312 | 1 | 311 | 0.0 | 522 |
| MsG0180004066.01.T01 | MTR_1g074160 | 80.449 | 312 | 57 | 2 | 1 | 312 | 1 | 308 | 0.0 | 519 |
| MsG0180004066.01.T01 | MTR_1g074020 | 79.167 | 312 | 61 | 2 | 1 | 312 | 1 | 308 | 0.0 | 504 |
| MsG0180004066.01.T01 | MTR_1g051120 | 76.038 | 313 | 74 | 1 | 1 | 312 | 1 | 313 | 1.26e-174 | 488 |
| MsG0180004066.01.T01 | MTR_1g074160 | 79.008 | 262 | 51 | 2 | 1 | 262 | 1 | 258 | 8.89e-154 | 431 |
| MsG0180004066.01.T01 | MTR_1g070175 | 53.974 | 302 | 135 | 2 | 11 | 312 | 11 | 308 | 3.63e-117 | 342 |
| MsG0180004066.01.T01 | MTR_1g051120 | 67.606 | 213 | 68 | 1 | 1 | 212 | 1 | 213 | 2.51e-101 | 296 |
| MsG0180004066.01.T01 | MTR_1g051120 | 68.571 | 210 | 65 | 1 | 1 | 209 | 1 | 210 | 7.16e-101 | 297 |
| MsG0180004066.01.T01 | MTR_7g100050 | 44.300 | 307 | 162 | 5 | 12 | 313 | 9 | 311 | 1.76e-82 | 254 |
| MsG0180004066.01.T01 | MTR_1g068630 | 41.694 | 307 | 166 | 2 | 13 | 313 | 12 | 311 | 2.82e-80 | 248 |
| MsG0180004066.01.T01 | MTR_1g030580 | 42.395 | 309 | 160 | 3 | 13 | 312 | 13 | 312 | 2.78e-78 | 243 |
| MsG0180004066.01.T01 | MTR_1g030600 | 40.461 | 304 | 178 | 1 | 12 | 312 | 14 | 317 | 6.36e-78 | 243 |
| MsG0180004066.01.T01 | MTR_3g072500 | 38.436 | 307 | 177 | 3 | 13 | 312 | 17 | 318 | 1.09e-73 | 232 |
| MsG0180004066.01.T01 | MTR_0096s0100 | 38.000 | 300 | 186 | 0 | 13 | 312 | 15 | 314 | 1.61e-73 | 231 |
| MsG0180004066.01.T01 | MTR_3g072560 | 39.731 | 297 | 177 | 2 | 16 | 312 | 18 | 312 | 4.76e-73 | 231 |
| MsG0180004066.01.T01 | MTR_3g072530 | 36.455 | 299 | 188 | 2 | 16 | 312 | 14 | 312 | 5.84e-72 | 227 |
| MsG0180004066.01.T01 | MTR_3g012420 | 40.789 | 304 | 176 | 3 | 12 | 312 | 13 | 315 | 9.73e-71 | 224 |
| MsG0180004066.01.T01 | MTR_8g041390 | 40.256 | 313 | 168 | 7 | 12 | 312 | 9 | 314 | 6.64e-70 | 222 |
| MsG0180004066.01.T01 | MTR_3g112480 | 38.535 | 314 | 178 | 3 | 13 | 312 | 17 | 329 | 3.65e-69 | 220 |
| MsG0180004066.01.T01 | MTR_3g072520 | 37.624 | 303 | 186 | 1 | 13 | 312 | 6 | 308 | 1.56e-67 | 216 |
| MsG0180004066.01.T01 | MTR_1g023180 | 35.494 | 324 | 179 | 5 | 13 | 312 | 18 | 335 | 1.49e-65 | 211 |
| MsG0180004066.01.T01 | MTR_6g081840 | 39.000 | 300 | 163 | 5 | 25 | 312 | 19 | 310 | 3.77e-64 | 206 |
| MsG0180004066.01.T01 | MTR_6g036450 | 36.677 | 319 | 190 | 6 | 1 | 312 | 1 | 314 | 4.07e-62 | 201 |
| MsG0180004066.01.T01 | MTR_2g007960 | 37.662 | 308 | 180 | 6 | 15 | 312 | 11 | 316 | 1.55e-58 | 193 |
| MsG0180004066.01.T01 | MTR_3g095460 | 34.868 | 304 | 193 | 2 | 13 | 312 | 2 | 304 | 4.65e-57 | 187 |
| MsG0180004066.01.T01 | MTR_2g027030 | 37.662 | 308 | 184 | 7 | 10 | 312 | 6 | 310 | 9.05e-57 | 187 |
| MsG0180004066.01.T01 | MTR_3g072500 | 37.109 | 256 | 149 | 3 | 13 | 261 | 17 | 267 | 2.34e-56 | 184 |
| MsG0180004066.01.T01 | MTR_5g021160 | 35.294 | 306 | 192 | 3 | 11 | 312 | 2 | 305 | 3.26e-56 | 186 |
| MsG0180004066.01.T01 | MTR_4g094342 | 33.226 | 310 | 192 | 5 | 13 | 312 | 10 | 314 | 1.69e-55 | 184 |
| MsG0180004066.01.T01 | MTR_2g007990 | 33.333 | 309 | 197 | 3 | 10 | 312 | 9 | 314 | 1.89e-53 | 180 |
| MsG0180004066.01.T01 | MTR_2g102340 | 33.981 | 309 | 198 | 3 | 7 | 312 | 3 | 308 | 2.30e-53 | 179 |
| MsG0180004066.01.T01 | MTR_2g016710 | 32.558 | 301 | 201 | 2 | 13 | 313 | 5 | 303 | 2.38e-53 | 177 |
| MsG0180004066.01.T01 | MTR_1g038560 | 33.333 | 300 | 195 | 4 | 15 | 312 | 2 | 298 | 2.49e-53 | 178 |
| MsG0180004066.01.T01 | MTR_1g114210 | 32.468 | 308 | 199 | 4 | 9 | 312 | 4 | 306 | 3.65e-53 | 177 |
| MsG0180004066.01.T01 | MTR_3g112480 | 39.147 | 258 | 142 | 3 | 69 | 312 | 18 | 274 | 5.85e-53 | 177 |
| MsG0180004066.01.T01 | MTR_2g007970 | 34.528 | 307 | 193 | 6 | 11 | 312 | 7 | 310 | 8.76e-53 | 178 |
| MsG0180004066.01.T01 | MTR_4g106720 | 34.219 | 301 | 190 | 5 | 15 | 312 | 13 | 308 | 2.42e-52 | 176 |
| MsG0180004066.01.T01 | MTR_2g016710 | 32.333 | 300 | 201 | 2 | 13 | 312 | 5 | 302 | 4.75e-52 | 175 |
| MsG0180004066.01.T01 | MTR_8g092650 | 35.179 | 307 | 191 | 3 | 13 | 312 | 2 | 307 | 1.68e-51 | 173 |
| MsG0180004066.01.T01 | MTR_3g090550 | 34.122 | 296 | 192 | 3 | 17 | 312 | 7 | 299 | 2.03e-51 | 173 |
| MsG0180004066.01.T01 | MTR_8g006120 | 35.570 | 298 | 189 | 3 | 17 | 312 | 11 | 307 | 4.33e-51 | 173 |
| MsG0180004066.01.T01 | MTR_3g095420 | 34.967 | 306 | 191 | 4 | 14 | 312 | 5 | 309 | 3.68e-50 | 170 |
| MsG0180004066.01.T01 | MTR_2g065550 | 32.333 | 300 | 200 | 2 | 15 | 312 | 9 | 307 | 2.25e-49 | 168 |
| MsG0180004066.01.T01 | MTR_3g072530 | 31.579 | 285 | 153 | 4 | 16 | 261 | 14 | 295 | 3.86e-49 | 166 |
| MsG0180004066.01.T01 | MTR_7g111830 | 32.237 | 304 | 197 | 3 | 17 | 312 | 8 | 310 | 4.44e-49 | 168 |
| MsG0180004066.01.T01 | MTR_8g006010 | 35.000 | 300 | 191 | 4 | 15 | 312 | 9 | 306 | 4.59e-49 | 168 |
| MsG0180004066.01.T01 | MTR_4g094352 | 34.824 | 313 | 186 | 6 | 13 | 312 | 9 | 316 | 7.91e-49 | 167 |
| MsG0180004066.01.T01 | MTR_4g094340 | 34.304 | 309 | 187 | 7 | 13 | 312 | 6 | 307 | 3.64e-48 | 165 |
| MsG0180004066.01.T01 | MTR_4g094340 | 34.304 | 309 | 187 | 7 | 13 | 312 | 24 | 325 | 7.46e-48 | 164 |
| MsG0180004066.01.T01 | MTR_8g006050 | 35.606 | 264 | 165 | 4 | 47 | 306 | 25 | 287 | 6.21e-47 | 161 |
| MsG0180004066.01.T01 | MTR_3g095450 | 33.333 | 306 | 196 | 4 | 14 | 312 | 3 | 307 | 8.78e-47 | 161 |
| MsG0180004066.01.T01 | MTR_3g072500 | 37.156 | 218 | 125 | 3 | 102 | 312 | 3 | 215 | 5.48e-46 | 157 |
| MsG0180004066.01.T01 | MTR_2g007260 | 32.792 | 308 | 198 | 3 | 13 | 312 | 11 | 317 | 7.35e-46 | 160 |
| MsG0180004066.01.T01 | MTR_8g006090 | 33.117 | 308 | 189 | 4 | 15 | 313 | 10 | 309 | 5.24e-45 | 155 |
| MsG0180004066.01.T01 | MTR_4g129650 | 33.003 | 303 | 189 | 6 | 17 | 312 | 9 | 304 | 5.72e-45 | 157 |
| MsG0180004066.01.T01 | MTR_5g034990 | 32.215 | 298 | 195 | 4 | 15 | 312 | 16 | 306 | 8.08e-44 | 153 |
| MsG0180004066.01.T01 | MTR_8g006090 | 32.899 | 307 | 189 | 4 | 15 | 312 | 10 | 308 | 1.04e-43 | 153 |
| MsG0180004066.01.T01 | MTR_1g030400 | 29.333 | 300 | 194 | 3 | 25 | 312 | 16 | 309 | 1.14e-43 | 154 |
| MsG0180004066.01.T01 | MTR_4g094362 | 30.897 | 301 | 202 | 3 | 16 | 312 | 14 | 312 | 1.76e-42 | 150 |
| MsG0180004066.01.T01 | MTR_3g095440 | 33.333 | 306 | 196 | 4 | 14 | 312 | 3 | 307 | 6.66e-42 | 149 |
| MsG0180004066.01.T01 | MTR_4g094360 | 31.046 | 306 | 204 | 3 | 13 | 313 | 11 | 314 | 7.34e-42 | 147 |
| MsG0180004066.01.T01 | MTR_5g021160 | 34.118 | 255 | 162 | 3 | 11 | 261 | 2 | 254 | 1.99e-41 | 145 |
| MsG0180004066.01.T01 | MTR_3g072500 | 36.098 | 205 | 120 | 2 | 13 | 210 | 17 | 217 | 5.86e-41 | 142 |
| MsG0180004066.01.T01 | MTR_5g025340 | 31.329 | 316 | 199 | 5 | 13 | 312 | 7 | 320 | 6.99e-41 | 146 |
| MsG0180004066.01.T01 | MTR_5g021160 | 37.054 | 224 | 135 | 3 | 93 | 312 | 1 | 222 | 4.09e-40 | 142 |
| MsG0180004066.01.T01 | MTR_4g094360 | 30.820 | 305 | 204 | 3 | 13 | 312 | 11 | 313 | 6.28e-40 | 144 |
| MsG0180004066.01.T01 | MTR_5g025290 | 31.230 | 317 | 198 | 6 | 13 | 312 | 8 | 321 | 1.46e-39 | 143 |
| MsG0180004066.01.T01 | MTR_5g025290 | 31.230 | 317 | 198 | 6 | 13 | 312 | 36 | 349 | 2.01e-39 | 143 |
| MsG0180004066.01.T01 | MTR_5g025370 | 30.503 | 318 | 201 | 5 | 13 | 312 | 7 | 322 | 3.35e-39 | 142 |
| MsG0180004066.01.T01 | MTR_5g025400 | 30.476 | 315 | 199 | 6 | 16 | 312 | 11 | 323 | 2.79e-38 | 140 |
| MsG0180004066.01.T01 | MTR_4g094340 | 34.685 | 222 | 138 | 3 | 96 | 312 | 22 | 241 | 3.07e-38 | 137 |
| MsG0180004066.01.T01 | MTR_6g007740 | 32.343 | 303 | 196 | 6 | 12 | 311 | 8 | 304 | 3.36e-38 | 141 |
| MsG0180004066.01.T01 | MTR_5g025330 | 31.210 | 314 | 198 | 5 | 15 | 312 | 8 | 319 | 6.40e-38 | 142 |
| MsG0180004066.01.T01 | MTR_3g019050 | 28.852 | 305 | 196 | 3 | 19 | 312 | 21 | 315 | 7.44e-38 | 139 |
| MsG0180004066.01.T01 | MTR_3g112480 | 39.409 | 203 | 108 | 3 | 124 | 312 | 1 | 202 | 1.64e-37 | 134 |
| MsG0180004066.01.T01 | MTR_2g102340 | 31.600 | 250 | 165 | 3 | 16 | 262 | 38 | 284 | 6.27e-37 | 134 |
| MsG0180004066.01.T01 | MTR_1g014510 | 33.119 | 311 | 195 | 7 | 10 | 312 | 5 | 310 | 7.00e-37 | 137 |
| MsG0180004066.01.T01 | MTR_6g007760 | 31.494 | 308 | 197 | 8 | 12 | 312 | 7 | 307 | 1.57e-35 | 130 |
| MsG0180004066.01.T01 | MTR_5g068790 | 26.752 | 314 | 225 | 3 | 3 | 312 | 5 | 317 | 1.72e-35 | 132 |
| MsG0180004066.01.T01 | MTR_5g034910 | 29.474 | 285 | 185 | 6 | 36 | 312 | 27 | 303 | 9.33e-35 | 129 |
| MsG0180004066.01.T01 | MTR_1g052205 | 38.308 | 201 | 104 | 6 | 122 | 312 | 2 | 192 | 1.66e-34 | 126 |
| MsG0180004066.01.T01 | MTR_5g034930 | 31.541 | 279 | 187 | 4 | 36 | 312 | 26 | 302 | 2.00e-34 | 129 |
| MsG0180004066.01.T01 | MTR_6g007743 | 30.719 | 306 | 199 | 7 | 12 | 312 | 8 | 305 | 2.62e-34 | 129 |
| MsG0180004066.01.T01 | MTR_5g069040 | 26.582 | 316 | 225 | 2 | 3 | 312 | 5 | 319 | 5.73e-34 | 128 |
| MsG0180004066.01.T01 | MTR_6g007747 | 29.703 | 303 | 204 | 6 | 12 | 312 | 8 | 303 | 1.36e-33 | 126 |
| MsG0180004066.01.T01 | MTR_5g089390 | 26.370 | 292 | 210 | 2 | 21 | 312 | 19 | 305 | 1.63e-33 | 126 |
| MsG0180004066.01.T01 | MTR_8g006090 | 33.333 | 234 | 140 | 3 | 87 | 312 | 3 | 228 | 5.53e-33 | 123 |
| MsG0180004066.01.T01 | MTR_0103s0090 | 28.947 | 304 | 213 | 3 | 10 | 312 | 5 | 306 | 7.98e-33 | 124 |
| MsG0180004066.01.T01 | MTR_6g007757 | 31.522 | 276 | 177 | 8 | 41 | 311 | 37 | 305 | 3.43e-32 | 123 |
| MsG0180004066.01.T01 | MTR_6g007750 | 30.945 | 307 | 200 | 7 | 12 | 312 | 8 | 308 | 5.06e-32 | 122 |
| MsG0180004066.01.T01 | MTR_3g095440 | 32.549 | 255 | 164 | 4 | 14 | 261 | 3 | 256 | 6.59e-32 | 120 |
| MsG0180004066.01.T01 | MTR_5g034970 | 30.038 | 263 | 172 | 6 | 36 | 292 | 27 | 283 | 8.04e-32 | 121 |
| MsG0180004066.01.T01 | MTR_4g094340 | 32.946 | 258 | 157 | 7 | 13 | 261 | 6 | 256 | 1.17e-31 | 119 |
| MsG0180004066.01.T01 | MTR_5g034980 | 28.523 | 298 | 201 | 6 | 21 | 312 | 12 | 303 | 1.25e-31 | 121 |
| MsG0180004066.01.T01 | MTR_8g072350 | 28.981 | 314 | 205 | 5 | 15 | 312 | 8 | 319 | 1.63e-31 | 121 |
| MsG0180004066.01.T01 | MTR_4g094340 | 32.946 | 258 | 157 | 7 | 13 | 261 | 24 | 274 | 2.00e-31 | 119 |
| MsG0180004066.01.T01 | MTR_8g092650 | 34.934 | 229 | 141 | 3 | 91 | 312 | 2 | 229 | 9.42e-31 | 117 |
| MsG0180004066.01.T01 | MTR_4g129650 | 34.466 | 206 | 120 | 5 | 113 | 312 | 1 | 197 | 6.00e-29 | 112 |
| MsG0180004066.01.T01 | MTR_4g094360 | 32.127 | 221 | 143 | 3 | 97 | 312 | 48 | 266 | 3.03e-28 | 112 |
| MsG0180004066.01.T01 | MTR_8g006090 | 33.624 | 229 | 150 | 2 | 17 | 243 | 12 | 240 | 7.34e-28 | 110 |
| MsG0180004066.01.T01 | MTR_4g094342 | 30.288 | 208 | 131 | 4 | 13 | 210 | 10 | 213 | 2.26e-27 | 107 |
| MsG0180004066.01.T01 | MTR_6g007753 | 32.061 | 262 | 161 | 8 | 59 | 312 | 337 | 589 | 7.35e-27 | 110 |
| MsG0180004066.01.T01 | MTR_6g007753 | 32.804 | 189 | 116 | 5 | 128 | 312 | 84 | 265 | 1.38e-17 | 83.6 |
| MsG0180004066.01.T01 | MTR_1g073980 | 92.000 | 50 | 4 | 0 | 212 | 261 | 48 | 97 | 1.03e-26 | 102 |
| MsG0180004066.01.T01 | MTR_0103s0090 | 30.374 | 214 | 148 | 1 | 99 | 312 | 3 | 215 | 1.37e-25 | 103 |
| MsG0180004066.01.T01 | MTR_6g007757 | 31.140 | 228 | 139 | 9 | 41 | 260 | 37 | 254 | 1.46e-23 | 97.8 |
| MsG0180004066.01.T01 | MTR_4g094340 | 33.171 | 205 | 122 | 6 | 13 | 208 | 24 | 222 | 3.89e-23 | 95.5 |
| MsG0180004066.01.T01 | MTR_5g012650 | 26.403 | 303 | 199 | 6 | 26 | 313 | 14 | 307 | 3.49e-21 | 92.8 |
| MsG0180004066.01.T01 | MTR_5g034980 | 27.126 | 247 | 168 | 6 | 21 | 261 | 12 | 252 | 3.21e-20 | 89.4 |
| MsG0180004066.01.T01 | MTR_4g100840 | 25.899 | 278 | 188 | 6 | 42 | 308 | 40 | 310 | 1.86e-19 | 87.8 |
| MsG0180004066.01.T01 | MTR_8g006090 | 34.177 | 158 | 103 | 1 | 87 | 243 | 3 | 160 | 5.95e-18 | 81.3 |
| MsG0180004066.01.T01 | MTR_6g007470 | 43.011 | 93 | 52 | 1 | 196 | 288 | 96 | 187 | 5.41e-16 | 76.3 |
| MsG0180004066.01.T01 | MTR_8g076800 | 48.684 | 76 | 38 | 1 | 211 | 286 | 171 | 245 | 7.37e-15 | 73.6 |
| MsG0180004066.01.T01 | MTR_1g014790 | 39.655 | 116 | 61 | 4 | 99 | 208 | 46 | 158 | 1.06e-14 | 72.0 |
| MsG0180004066.01.T01 | MTR_1g068720 | 34.862 | 109 | 69 | 2 | 206 | 312 | 93 | 201 | 4.24e-12 | 65.5 |
| MsG0180004066.01.T01 | MTR_1g068720 | 30.709 | 127 | 75 | 3 | 11 | 131 | 9 | 128 | 2.66e-11 | 63.2 |
| MsG0180004066.01.T01 | MTR_4g094348 | 29.710 | 138 | 81 | 4 | 95 | 220 | 1 | 134 | 8.85e-12 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004066.01.T01 | AT5G07050 | 43.322 | 307 | 162 | 4 | 16 | 312 | 17 | 321 | 1.19e-78 | 245 |
| MsG0180004066.01.T01 | AT2G37460 | 39.867 | 301 | 180 | 1 | 13 | 313 | 11 | 310 | 1.41e-78 | 244 |
| MsG0180004066.01.T01 | AT2G39510 | 41.391 | 302 | 176 | 1 | 13 | 313 | 4 | 305 | 2.93e-78 | 243 |
| MsG0180004066.01.T01 | AT4G08300 | 38.487 | 304 | 182 | 3 | 13 | 312 | 7 | 309 | 2.80e-71 | 225 |
| MsG0180004066.01.T01 | AT2G40900 | 37.829 | 304 | 184 | 2 | 9 | 312 | 3 | 301 | 5.40e-71 | 225 |
| MsG0180004066.01.T01 | AT1G44800 | 39.735 | 302 | 178 | 3 | 13 | 312 | 7 | 306 | 8.70e-71 | 224 |
| MsG0180004066.01.T01 | AT1G75500 | 37.380 | 313 | 181 | 3 | 11 | 312 | 14 | 322 | 1.46e-69 | 221 |
| MsG0180004066.01.T01 | AT1G75500 | 37.380 | 313 | 181 | 3 | 11 | 312 | 14 | 322 | 1.46e-69 | 221 |
| MsG0180004066.01.T01 | AT3G56620 | 38.361 | 305 | 182 | 3 | 9 | 312 | 3 | 302 | 8.53e-67 | 214 |
| MsG0180004066.01.T01 | AT3G18200 | 38.141 | 312 | 189 | 3 | 2 | 312 | 20 | 328 | 8.91e-67 | 214 |
| MsG0180004066.01.T01 | AT1G21890 | 35.370 | 311 | 190 | 2 | 13 | 313 | 7 | 316 | 1.49e-66 | 212 |
| MsG0180004066.01.T01 | AT5G13670 | 36.452 | 310 | 184 | 4 | 12 | 313 | 3 | 307 | 2.37e-66 | 213 |
| MsG0180004066.01.T01 | AT4G08290 | 37.171 | 304 | 183 | 4 | 14 | 312 | 10 | 310 | 8.28e-66 | 211 |
| MsG0180004066.01.T01 | AT1G21890 | 35.161 | 310 | 190 | 2 | 13 | 312 | 7 | 315 | 2.54e-65 | 210 |
| MsG0180004066.01.T01 | AT2G37450 | 37.209 | 301 | 167 | 2 | 13 | 313 | 5 | 283 | 3.71e-62 | 201 |
| MsG0180004066.01.T01 | AT1G43650 | 35.786 | 299 | 189 | 2 | 14 | 312 | 4 | 299 | 2.70e-59 | 193 |
| MsG0180004066.01.T01 | AT4G30420 | 35.275 | 309 | 185 | 4 | 13 | 312 | 5 | 307 | 4.31e-56 | 186 |
| MsG0180004066.01.T01 | AT3G53210 | 34.641 | 306 | 183 | 5 | 16 | 312 | 9 | 306 | 6.49e-56 | 186 |
| MsG0180004066.01.T01 | AT4G30420 | 34.983 | 303 | 182 | 4 | 19 | 312 | 1 | 297 | 3.74e-53 | 178 |
| MsG0180004066.01.T01 | AT1G09380 | 31.894 | 301 | 199 | 2 | 17 | 312 | 8 | 307 | 1.65e-52 | 177 |
| MsG0180004066.01.T01 | AT5G64700 | 33.770 | 305 | 193 | 3 | 16 | 312 | 7 | 310 | 4.05e-52 | 175 |
| MsG0180004066.01.T01 | AT3G30340 | 32.450 | 302 | 201 | 2 | 13 | 312 | 7 | 307 | 1.69e-50 | 171 |
| MsG0180004066.01.T01 | AT4G08290 | 34.783 | 253 | 157 | 4 | 14 | 261 | 10 | 259 | 3.81e-47 | 160 |
| MsG0180004066.01.T01 | AT2G37450 | 40.094 | 212 | 126 | 1 | 102 | 313 | 1 | 211 | 6.40e-47 | 159 |
| MsG0180004066.01.T01 | AT4G01440 | 27.907 | 301 | 215 | 2 | 14 | 313 | 7 | 306 | 6.79e-46 | 158 |
| MsG0180004066.01.T01 | AT4G01440 | 27.667 | 300 | 215 | 2 | 14 | 312 | 7 | 305 | 1.68e-44 | 155 |
| MsG0180004066.01.T01 | AT3G18200 | 41.089 | 202 | 113 | 4 | 113 | 312 | 1 | 198 | 3.39e-43 | 149 |
| MsG0180004066.01.T01 | AT1G43650 | 33.871 | 248 | 161 | 2 | 14 | 261 | 4 | 248 | 3.66e-43 | 149 |
| MsG0180004066.01.T01 | AT5G64700 | 33.071 | 254 | 161 | 3 | 16 | 261 | 7 | 259 | 6.48e-42 | 146 |
| MsG0180004066.01.T01 | AT3G53210 | 31.621 | 253 | 155 | 3 | 16 | 263 | 9 | 248 | 1.08e-40 | 143 |
| MsG0180004066.01.T01 | AT1G68170 | 29.545 | 308 | 210 | 4 | 10 | 312 | 6 | 311 | 4.05e-40 | 144 |
| MsG0180004066.01.T01 | AT1G68170 | 29.966 | 297 | 201 | 4 | 21 | 312 | 7 | 301 | 1.72e-38 | 139 |
| MsG0180004066.01.T01 | AT1G11450 | 28.947 | 304 | 214 | 2 | 11 | 313 | 10 | 312 | 1.84e-38 | 139 |
| MsG0180004066.01.T01 | AT5G40210 | 30.935 | 278 | 174 | 5 | 36 | 312 | 32 | 292 | 4.47e-38 | 138 |
| MsG0180004066.01.T01 | AT1G70260 | 28.333 | 300 | 183 | 4 | 13 | 292 | 8 | 295 | 1.74e-37 | 137 |
| MsG0180004066.01.T01 | AT3G53210 | 32.900 | 231 | 138 | 4 | 91 | 312 | 27 | 249 | 2.35e-37 | 135 |
| MsG0180004066.01.T01 | AT1G11450 | 28.525 | 305 | 216 | 2 | 9 | 312 | 8 | 311 | 3.88e-37 | 136 |
| MsG0180004066.01.T01 | AT2G37450 | 39.459 | 185 | 111 | 1 | 129 | 313 | 61 | 244 | 7.21e-37 | 134 |
| MsG0180004066.01.T01 | AT1G01070 | 28.344 | 314 | 213 | 5 | 6 | 312 | 5 | 313 | 1.14e-36 | 135 |
| MsG0180004066.01.T01 | AT3G30340 | 30.556 | 252 | 172 | 2 | 13 | 262 | 7 | 257 | 2.67e-35 | 129 |
| MsG0180004066.01.T01 | AT1G60050 | 27.832 | 309 | 207 | 5 | 17 | 312 | 13 | 318 | 5.37e-35 | 130 |
| MsG0180004066.01.T01 | AT4G01430 | 27.124 | 306 | 217 | 5 | 13 | 313 | 5 | 309 | 5.71e-35 | 129 |
| MsG0180004066.01.T01 | AT3G28050 | 30.769 | 299 | 191 | 8 | 19 | 312 | 17 | 304 | 1.16e-34 | 129 |
| MsG0180004066.01.T01 | AT1G11450 | 30.418 | 263 | 181 | 2 | 51 | 312 | 6 | 267 | 6.55e-34 | 126 |
| MsG0180004066.01.T01 | AT1G25270 | 27.907 | 301 | 211 | 3 | 16 | 312 | 2 | 300 | 7.18e-34 | 127 |
| MsG0180004066.01.T01 | AT1G11460 | 27.451 | 306 | 219 | 3 | 9 | 312 | 8 | 312 | 9.02e-34 | 126 |
| MsG0180004066.01.T01 | AT4G01430 | 26.885 | 305 | 217 | 5 | 13 | 312 | 5 | 308 | 2.05e-33 | 126 |
| MsG0180004066.01.T01 | AT5G40230 | 31.295 | 278 | 182 | 6 | 41 | 312 | 45 | 319 | 2.16e-32 | 124 |
| MsG0180004066.01.T01 | AT3G28130 | 29.766 | 299 | 198 | 6 | 21 | 312 | 17 | 310 | 2.62e-32 | 123 |
| MsG0180004066.01.T01 | AT1G11450 | 30.116 | 259 | 179 | 2 | 55 | 312 | 3 | 260 | 2.79e-32 | 122 |
| MsG0180004066.01.T01 | AT4G01450 | 26.974 | 304 | 210 | 3 | 14 | 313 | 7 | 302 | 5.22e-32 | 122 |
| MsG0180004066.01.T01 | AT4G28040 | 26.159 | 302 | 210 | 4 | 13 | 312 | 4 | 294 | 9.45e-32 | 122 |
| MsG0180004066.01.T01 | AT4G28040 | 26.159 | 302 | 210 | 4 | 13 | 312 | 4 | 294 | 9.45e-32 | 122 |
| MsG0180004066.01.T01 | AT4G28040 | 26.159 | 302 | 210 | 4 | 13 | 312 | 4 | 294 | 9.45e-32 | 122 |
| MsG0180004066.01.T01 | AT4G28040 | 26.159 | 302 | 210 | 4 | 13 | 312 | 4 | 294 | 9.45e-32 | 122 |
| MsG0180004066.01.T01 | AT4G28040 | 26.159 | 302 | 210 | 4 | 13 | 312 | 4 | 294 | 9.45e-32 | 122 |
| MsG0180004066.01.T01 | AT5G45370 | 28.296 | 311 | 205 | 5 | 18 | 312 | 21 | 329 | 1.40e-31 | 122 |
| MsG0180004066.01.T01 | AT5G45370 | 28.296 | 311 | 205 | 5 | 18 | 312 | 21 | 329 | 1.40e-31 | 122 |
| MsG0180004066.01.T01 | AT5G45370 | 28.428 | 299 | 196 | 4 | 18 | 312 | 21 | 305 | 1.86e-31 | 120 |
| MsG0180004066.01.T01 | AT4G01440 | 27.344 | 256 | 172 | 4 | 14 | 262 | 7 | 255 | 4.66e-31 | 118 |
| MsG0180004066.01.T01 | AT5G40240 | 29.137 | 278 | 188 | 5 | 41 | 312 | 44 | 318 | 1.11e-30 | 119 |
| MsG0180004066.01.T01 | AT5G40240 | 29.137 | 278 | 188 | 5 | 41 | 312 | 44 | 318 | 1.11e-30 | 119 |
| MsG0180004066.01.T01 | AT5G40240 | 29.137 | 278 | 188 | 5 | 41 | 312 | 58 | 332 | 1.35e-30 | 119 |
| MsG0180004066.01.T01 | AT4G01450 | 26.490 | 302 | 210 | 3 | 14 | 311 | 7 | 300 | 5.28e-30 | 117 |
| MsG0180004066.01.T01 | AT3G28130 | 32.569 | 218 | 141 | 3 | 99 | 312 | 9 | 224 | 1.39e-29 | 114 |
| MsG0180004066.01.T01 | AT3G28130 | 32.569 | 218 | 141 | 3 | 99 | 312 | 9 | 224 | 1.39e-29 | 114 |
| MsG0180004066.01.T01 | AT3G28100 | 29.110 | 292 | 196 | 7 | 26 | 312 | 26 | 311 | 5.73e-29 | 114 |
| MsG0180004066.01.T01 | AT4G01440 | 28.718 | 195 | 137 | 2 | 119 | 312 | 4 | 197 | 1.10e-28 | 111 |
| MsG0180004066.01.T01 | AT4G01440 | 28.718 | 195 | 137 | 2 | 119 | 312 | 4 | 197 | 1.10e-28 | 111 |
| MsG0180004066.01.T01 | AT3G45870 | 28.165 | 316 | 207 | 6 | 13 | 313 | 8 | 318 | 1.27e-27 | 110 |
| MsG0180004066.01.T01 | AT4G15540 | 28.165 | 316 | 209 | 6 | 1 | 312 | 1 | 302 | 1.54e-27 | 110 |
| MsG0180004066.01.T01 | AT4G15540 | 28.165 | 316 | 209 | 6 | 1 | 312 | 1 | 302 | 1.54e-27 | 110 |
| MsG0180004066.01.T01 | AT4G24980 | 26.429 | 280 | 140 | 6 | 34 | 313 | 4 | 217 | 1.05e-26 | 106 |
| MsG0180004066.01.T01 | AT1G01070 | 29.457 | 258 | 170 | 5 | 62 | 312 | 14 | 266 | 1.05e-26 | 107 |
| MsG0180004066.01.T01 | AT3G28070 | 30.415 | 217 | 147 | 3 | 99 | 312 | 7 | 222 | 1.21e-26 | 106 |
| MsG0180004066.01.T01 | AT3G45870 | 27.937 | 315 | 207 | 6 | 13 | 312 | 8 | 317 | 2.23e-26 | 107 |
| MsG0180004066.01.T01 | AT3G28070 | 30.342 | 234 | 158 | 4 | 82 | 312 | 83 | 314 | 2.44e-26 | 106 |
| MsG0180004066.01.T01 | AT3G28070 | 30.342 | 234 | 158 | 4 | 82 | 312 | 83 | 314 | 5.76e-26 | 106 |
| MsG0180004066.01.T01 | AT3G28080 | 28.063 | 253 | 174 | 6 | 65 | 312 | 62 | 311 | 1.70e-25 | 104 |
| MsG0180004066.01.T01 | AT3G28080 | 28.241 | 216 | 149 | 4 | 101 | 312 | 9 | 222 | 2.70e-25 | 102 |
| MsG0180004066.01.T01 | AT3G28080 | 28.241 | 216 | 149 | 4 | 101 | 312 | 9 | 222 | 2.70e-25 | 102 |
| MsG0180004066.01.T01 | AT3G28080 | 28.241 | 216 | 149 | 4 | 101 | 312 | 9 | 222 | 2.70e-25 | 102 |
| MsG0180004066.01.T01 | AT3G28080 | 28.241 | 216 | 149 | 4 | 101 | 312 | 9 | 222 | 2.70e-25 | 102 |
| MsG0180004066.01.T01 | AT4G01450 | 27.801 | 241 | 162 | 3 | 14 | 250 | 7 | 239 | 4.02e-25 | 102 |
| MsG0180004066.01.T01 | AT3G28080 | 28.241 | 216 | 149 | 4 | 101 | 312 | 90 | 303 | 1.35e-24 | 102 |
| MsG0180004066.01.T01 | AT4G19185 | 27.070 | 314 | 205 | 6 | 18 | 312 | 22 | 330 | 9.75e-24 | 100 |
| MsG0180004066.01.T01 | AT4G01450 | 27.928 | 222 | 149 | 2 | 14 | 231 | 7 | 221 | 2.50e-23 | 96.7 |
| MsG0180004066.01.T01 | AT1G11450 | 29.167 | 216 | 151 | 2 | 98 | 312 | 5 | 219 | 6.88e-22 | 93.2 |
| MsG0180004066.01.T01 | AT5G47470 | 25.818 | 275 | 193 | 4 | 42 | 312 | 83 | 350 | 1.66e-21 | 94.4 |
| MsG0180004066.01.T01 | AT5G47470 | 25.818 | 275 | 193 | 4 | 42 | 312 | 55 | 322 | 1.80e-21 | 94.0 |
| MsG0180004066.01.T01 | AT5G47470 | 25.818 | 275 | 193 | 4 | 42 | 312 | 83 | 350 | 1.84e-21 | 94.0 |
| MsG0180004066.01.T01 | AT3G28130 | 32.086 | 187 | 121 | 3 | 130 | 312 | 1 | 185 | 2.59e-21 | 90.9 |
| MsG0180004066.01.T01 | AT3G28100 | 29.583 | 240 | 159 | 6 | 26 | 260 | 26 | 260 | 7.59e-21 | 90.5 |
| MsG0180004066.01.T01 | AT3G28130 | 28.112 | 249 | 168 | 5 | 21 | 262 | 17 | 261 | 1.85e-20 | 89.4 |
| MsG0180004066.01.T01 | AT3G28070 | 30.108 | 186 | 126 | 3 | 130 | 312 | 1 | 185 | 1.18e-18 | 83.6 |
| MsG0180004066.01.T01 | AT3G45870 | 28.821 | 229 | 151 | 3 | 13 | 229 | 8 | 236 | 3.06e-18 | 83.6 |
| MsG0180004066.01.T01 | AT3G28080 | 27.273 | 187 | 130 | 4 | 130 | 312 | 1 | 185 | 2.97e-17 | 79.7 |
| MsG0180004066.01.T01 | AT5G45370 | 27.753 | 227 | 146 | 5 | 102 | 312 | 3 | 227 | 5.73e-17 | 79.7 |
| MsG0180004066.01.T01 | AT5G45370 | 27.753 | 227 | 146 | 5 | 102 | 312 | 3 | 227 | 5.73e-17 | 79.7 |
| MsG0180004066.01.T01 | AT4G16620 | 24.333 | 300 | 206 | 5 | 24 | 312 | 19 | 308 | 2.76e-16 | 79.0 |
| MsG0180004066.01.T01 | AT4G19185 | 26.809 | 235 | 148 | 6 | 97 | 312 | 23 | 252 | 4.99e-16 | 77.8 |
| MsG0180004066.01.T01 | AT3G28060 | 33.036 | 112 | 74 | 1 | 202 | 313 | 45 | 155 | 1.93e-14 | 70.1 |
| MsG0180004066.01.T01 | AT3G45870 | 28.155 | 206 | 128 | 6 | 123 | 313 | 43 | 243 | 2.70e-13 | 68.9 |
| MsG0180004066.01.T01 | AT3G45870 | 28.155 | 206 | 128 | 6 | 123 | 313 | 43 | 243 | 2.70e-13 | 68.9 |
| MsG0180004066.01.T01 | AT3G28100 | 32.374 | 139 | 89 | 3 | 26 | 163 | 26 | 160 | 6.48e-13 | 67.8 |
| MsG0180004066.01.T01 | AT3G45870 | 27.805 | 205 | 128 | 6 | 123 | 312 | 43 | 242 | 5.56e-12 | 65.9 |
| MsG0180004066.01.T01 | AT3G28130 | 28.767 | 146 | 98 | 3 | 21 | 163 | 17 | 159 | 6.52e-12 | 64.3 |
| MsG0180004066.01.T01 | AT4G01430 | 27.326 | 172 | 120 | 4 | 145 | 312 | 1 | 171 | 5.83e-11 | 62.0 |
Find 64 sgRNAs with CRISPR-Local
Find 123 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTACATGGATGTGCTTTAT+TGG | 0.204661 | 1:+72737539 | MsG0180004066.01.T01:CDS |
| GACTTGTGGTCCATAATATA+TGG | 0.217089 | 1:+72737638 | MsG0180004066.01.T01:CDS |
| ATATTTGTGCTTTCTTTGTT+AGG | 0.235092 | 1:+72736656 | MsG0180004066.01.T01:CDS |
| TATTGATCTACATTCAATTA+TGG | 0.238153 | 1:+72737780 | MsG0180004066.01.T01:CDS |
| TATCAACGAGAGTGGATTAA+AGG | 0.268996 | 1:+72737333 | MsG0180004066.01.T01:CDS |
| AAACCTAACCCCATATATTA+TGG | 0.288350 | 1:-72737648 | None:intergenic |
| AACCCTTCAGCATGGATTAT+AGG | 0.289438 | 1:+72737605 | MsG0180004066.01.T01:CDS |
| TTCAGAGATAAAATATAAAA+AGG | 0.306735 | 1:-72736114 | None:intergenic |
| ACCCTTCAGCATGGATTATA+GGG | 0.326309 | 1:+72737606 | MsG0180004066.01.T01:CDS |
| CCCTCTTTGTACTATATTTG+TGG | 0.328346 | 1:+72737844 | MsG0180004066.01.T01:CDS |
| AAACATCATCACTAAACTTA+TGG | 0.354829 | 1:+72736010 | None:intergenic |
| TGCCACAAGTTTCTCATAAC+AGG | 0.377701 | 1:-72737274 | None:intergenic |
| ACTTGTGGTCCATAATATAT+GGG | 0.400807 | 1:+72737639 | MsG0180004066.01.T01:CDS |
| GGTTGAATAATATGGATTAG+AGG | 0.401678 | 1:-72737298 | None:intergenic |
| TATTAATGACAGGGAATTGT+TGG | 0.403386 | 1:+72737749 | MsG0180004066.01.T01:intron |
| TATTTGTGCTTTCTTTGTTA+GGG | 0.426849 | 1:+72736657 | MsG0180004066.01.T01:CDS |
| ACCTATCGGCATGTTCTCGC+CGG | 0.429528 | 1:+72736176 | MsG0180004066.01.T01:CDS |
| CCTATCGGCATGTTCTCGCC+GGG | 0.430648 | 1:+72736177 | MsG0180004066.01.T01:CDS |
| TTCTATATGGTACATTATGC+AGG | 0.432883 | 1:+72737390 | MsG0180004066.01.T01:CDS |
| CTCAATTATCACTCACTACA+TGG | 0.439857 | 1:+72737525 | MsG0180004066.01.T01:CDS |
| ATCAACGAGAGTGGATTAAA+GGG | 0.446252 | 1:+72737334 | MsG0180004066.01.T01:CDS |
| AAAAGAACAAGTGTCAGCTT+TGG | 0.474816 | 1:-72736626 | None:intergenic |
| TCTGAATCTTCCTTCAATCA+TGG | 0.477623 | 1:+72736131 | MsG0180004066.01.T01:CDS |
| GTTCAAGCCACACCTTATCA+TGG | 0.485715 | 1:+72736070 | MsG0180004066.01.T01:CDS |
| GGGACCTTGATATCCTTAGC+TGG | 0.486715 | 1:+72737223 | MsG0180004066.01.T01:CDS |
| CTCTCAAGAAAGTATGCAAA+AGG | 0.494726 | 1:-72736212 | None:intergenic |
| AACACCAGCTAAGGATATCA+AGG | 0.497528 | 1:-72737227 | None:intergenic |
| AACATGGAAGCAAGAAATGT+TGG | 0.500297 | 1:-72736809 | None:intergenic |
| GTAGTGAGTGATAATTGAGC+AGG | 0.509226 | 1:-72737521 | None:intergenic |
| CTTATGTTTATGTTACCTAT+CGG | 0.512879 | 1:+72736162 | MsG0180004066.01.T01:CDS |
| TGACAGGGAATTGTTGGTGG+TGG | 0.516639 | 1:+72737755 | MsG0180004066.01.T01:intron |
| ATACTAGCATACTTCGTCCT+TGG | 0.517108 | 1:+72737869 | MsG0180004066.01.T01:CDS |
| TTGACTTGAATGCAGGATTG+AGG | 0.518118 | 1:+72737159 | MsG0180004066.01.T01:intron |
| TTTCACCATGACACTATACA+AGG | 0.524518 | 1:+72737249 | MsG0180004066.01.T01:CDS |
| TCATTATTGCAGTGGCACTC+AGG | 0.535841 | 1:+72736855 | MsG0180004066.01.T01:CDS |
| CACTGCAATAATGAAGGTAA+TGG | 0.555306 | 1:-72736846 | None:intergenic |
| AACTCTTTGTATACATGTAG+AGG | 0.556101 | 1:-72736050 | None:intergenic |
| CATTACCTTCATTATTGCAG+TGG | 0.559816 | 1:+72736847 | MsG0180004066.01.T01:CDS |
| AGTTCTTCTATCAACGAGAG+TGG | 0.559959 | 1:+72737325 | MsG0180004066.01.T01:CDS |
| CGATAGGTAACATAAACATA+AGG | 0.561067 | 1:-72736161 | None:intergenic |
| AGCCCTATAATCCATGCTGA+AGG | 0.566395 | 1:-72737608 | None:intergenic |
| CATGGTGAAAACACCAGCTA+AGG | 0.566514 | 1:-72737236 | None:intergenic |
| CTTGGGCTAAAACCATGATA+AGG | 0.570397 | 1:-72736082 | None:intergenic |
| GAGTGCCACTGCAATAATGA+AGG | 0.571106 | 1:-72736852 | None:intergenic |
| AGGACTCATTCCATGATTGA+AGG | 0.576140 | 1:-72736141 | None:intergenic |
| TAATGACAGGGAATTGTTGG+TGG | 0.600813 | 1:+72737752 | MsG0180004066.01.T01:intron |
| GCCACAAATATAGTACAAAG+AGG | 0.605176 | 1:-72737845 | None:intergenic |
| GCCCTATAATCCATGCTGAA+GGG | 0.606291 | 1:-72737607 | None:intergenic |
| AGGTCCCTTGTATAGTGTCA+TGG | 0.606603 | 1:-72737254 | None:intergenic |
| CCACAAATATAGTACAAAGA+GGG | 0.611746 | 1:-72737844 | None:intergenic |
| AACATAATAACCCTTCAGCA+TGG | 0.615122 | 1:+72737597 | MsG0180004066.01.T01:CDS |
| CTTGTGGTCCATAATATATG+GGG | 0.619780 | 1:+72737640 | MsG0180004066.01.T01:CDS |
| GGAAGCTATAGTGTTGAACA+TGG | 0.625781 | 1:-72736825 | None:intergenic |
| TAGGGCTCAACATTGACTTG+TGG | 0.638445 | 1:+72737624 | MsG0180004066.01.T01:CDS |
| CCCGGCGAGAACATGCCGAT+AGG | 0.651355 | 1:-72736177 | None:intergenic |
| TAGTGAGTGATAATTGAGCA+GGG | 0.654187 | 1:-72737520 | None:intergenic |
| AAAATATGGCAGGATCACCA+TGG | 0.660749 | 1:+72736748 | MsG0180004066.01.T01:intron |
| CTATCGGCATGTTCTCGCCG+GGG | 0.671878 | 1:+72736178 | MsG0180004066.01.T01:CDS |
| GCTAAAACCATGATAAGGTG+TGG | 0.672505 | 1:-72736077 | None:intergenic |
| AAAAGGAAACATCACAACCC+CGG | 0.676563 | 1:-72736195 | None:intergenic |
| TTCACCATGACACTATACAA+GGG | 0.685500 | 1:+72737250 | MsG0180004066.01.T01:CDS |
| AAAGTACAAATTGAGTGCCA+TGG | 0.689345 | 1:-72736765 | None:intergenic |
| AATGTACCATATAGAAAACG+TGG | 0.726303 | 1:-72737383 | None:intergenic |
| GACCTGTTATGAGAAACTTG+TGG | 0.744585 | 1:+72737272 | MsG0180004066.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATGTTAGAAATTTATATT+TGG | - | Chr1:72737713-72737732 | None:intergenic | 10.0% |
| !!! | AAATTTCTATTTTTTGTTTT+TGG | + | Chr1:72736929-72736948 | MsG0180004066.01.T01:intron | 10.0% |
| !!! | CAAAAAATAGAAATTTTATA+AGG | - | Chr1:72736925-72736944 | None:intergenic | 10.0% |
| !! | TTCAGAGATAAAATATAAAA+AGG | - | Chr1:72736117-72736136 | None:intergenic | 15.0% |
| !!! | AAAATTTAACCTATTGATTT+CGG | + | Chr1:72737101-72737120 | MsG0180004066.01.T01:intron | 15.0% |
| !!! | ATGTTTTTAGTTTTGTAATT+TGG | - | Chr1:72736980-72736999 | None:intergenic | 15.0% |
| !! | AACTCTAATATCTTTGTAAT+TGG | + | Chr1:72737469-72737488 | MsG0180004066.01.T01:intron | 20.0% |
| !! | AATCATTCAATATTAATGAC+AGG | + | Chr1:72737739-72737758 | MsG0180004066.01.T01:intron | 20.0% |
| !! | ATCATTCAATATTAATGACA+GGG | + | Chr1:72737740-72737759 | MsG0180004066.01.T01:intron | 20.0% |
| !! | ATGTATGTTATTACATTGTA+TGG | + | Chr1:72736696-72736715 | MsG0180004066.01.T01:intron | 20.0% |
| !! | TAAAAACTAGTTATGAGTTA+AGG | - | Chr1:72737422-72737441 | None:intergenic | 20.0% |
| !! | TATTGATCTACATTCAATTA+TGG | + | Chr1:72737780-72737799 | MsG0180004066.01.T01:CDS | 20.0% |
| !!! | AACTTTTTGGTTGAATAATA+TGG | - | Chr1:72737309-72737328 | None:intergenic | 20.0% |
| !!! | GTATAATTTTAAAATATGGC+AGG | + | Chr1:72736738-72736757 | MsG0180004066.01.T01:intron | 20.0% |
| !!! | TTTTAGTTTTGTAATTTGGA+AGG | - | Chr1:72736976-72736995 | None:intergenic | 20.0% |
| ! | ATATTTGTGCTTTCTTTGTT+AGG | + | Chr1:72736656-72736675 | MsG0180004066.01.T01:CDS | 25.0% |
| ! | ATCTTTGTAATTGGAAATTC+AGG | + | Chr1:72737478-72737497 | MsG0180004066.01.T01:intron | 25.0% |
| ! | CTTATGTTTATGTTACCTAT+CGG | + | Chr1:72736162-72736181 | MsG0180004066.01.T01:CDS | 25.0% |
| ! | TATTACATTGTATGGAAGTT+TGG | + | Chr1:72736704-72736723 | MsG0180004066.01.T01:intron | 25.0% |
| ! | TATTTGTGCTTTCTTTGTTA+GGG | + | Chr1:72736657-72736676 | MsG0180004066.01.T01:CDS | 25.0% |
| ! | TTAAATACAGTGACAAAAAC+AGG | - | Chr1:72737824-72737843 | None:intergenic | 25.0% |
| AAACCTAACCCCATATATTA+TGG | - | Chr1:72737651-72737670 | None:intergenic | 30.0% | |
| AACTCTTTGTATACATGTAG+AGG | - | Chr1:72736053-72736072 | None:intergenic | 30.0% | |
| AATGTACCATATAGAAAACG+TGG | - | Chr1:72737386-72737405 | None:intergenic | 30.0% | |
| ACTTGTGGTCCATAATATAT+GGG | + | Chr1:72737639-72737658 | MsG0180004066.01.T01:CDS | 30.0% | |
| ATAAATGCTCCGAAATCAAT+AGG | - | Chr1:72737113-72737132 | None:intergenic | 30.0% | |
| CCACAAATATAGTACAAAGA+GGG | - | Chr1:72737847-72737866 | None:intergenic | 30.0% | |
| CGATAGGTAACATAAACATA+AGG | - | Chr1:72736164-72736183 | None:intergenic | 30.0% | |
| CTTGGTGAAAAACTTTATCT+GGG | + | Chr1:72737887-72737906 | MsG0180004066.01.T01:CDS | 30.0% | |
| GTAGCATAGCAAAAATTCTT+GGG | + | Chr1:72737203-72737222 | MsG0180004066.01.T01:CDS | 30.0% | |
| GTTCGCAATTCTTGATATAA+TGG | + | Chr1:72736877-72736896 | MsG0180004066.01.T01:intron | 30.0% | |
| TATTAATGACAGGGAATTGT+TGG | + | Chr1:72737749-72737768 | MsG0180004066.01.T01:intron | 30.0% | |
| TTCTATATGGTACATTATGC+AGG | + | Chr1:72737390-72737409 | MsG0180004066.01.T01:CDS | 30.0% | |
| ! | CAAAGTTCATAGTTTGTGTT+TGG | + | Chr1:72736264-72736283 | MsG0180004066.01.T01:intron | 30.0% |
| !! | GGTTGAATAATATGGATTAG+AGG | - | Chr1:72737301-72737320 | None:intergenic | 30.0% |
| !! | TCGTTGATAGAAGAACTTTT+TGG | - | Chr1:72737322-72737341 | None:intergenic | 30.0% |
| !! | TTAATCTTCTAGCTTAACCA+AGG | - | Chr1:72736451-72736470 | None:intergenic | 30.0% |
| AAAAGAACAAGTGTCAGCTT+TGG | - | Chr1:72736629-72736648 | None:intergenic | 35.0% | |
| AAAGTACAAATTGAGTGCCA+TGG | - | Chr1:72736768-72736787 | None:intergenic | 35.0% | |
| AACATAATAACCCTTCAGCA+TGG | + | Chr1:72737597-72737616 | MsG0180004066.01.T01:CDS | 35.0% | |
| AACATGGAAGCAAGAAATGT+TGG | - | Chr1:72736812-72736831 | None:intergenic | 35.0% | |
| AATTTGGAAGGACACAAAAG+TGG | - | Chr1:72736964-72736983 | None:intergenic | 35.0% | |
| ACTACATGGATGTGCTTTAT+TGG | + | Chr1:72737539-72737558 | MsG0180004066.01.T01:CDS | 35.0% | |
| CACCAAGAATCATGATTGTA+AGG | - | Chr1:72736297-72736316 | None:intergenic | 35.0% | |
| CACTGCAATAATGAAGGTAA+TGG | - | Chr1:72736849-72736868 | None:intergenic | 35.0% | |
| CATTACCTTCATTATTGCAG+TGG | + | Chr1:72736847-72736866 | MsG0180004066.01.T01:CDS | 35.0% | |
| CCCTCTTTGTACTATATTTG+TGG | + | Chr1:72737844-72737863 | MsG0180004066.01.T01:CDS | 35.0% | |
| CCTTGGTGAAAAACTTTATC+TGG | + | Chr1:72737886-72737905 | MsG0180004066.01.T01:CDS | 35.0% | |
| CGTAGCATAGCAAAAATTCT+TGG | + | Chr1:72737202-72737221 | MsG0180004066.01.T01:CDS | 35.0% | |
| CTAGATTCTTCAACGGATAT+TGG | + | Chr1:72737036-72737055 | MsG0180004066.01.T01:intron | 35.0% | |
| CTCAATTATCACTCACTACA+TGG | + | Chr1:72737525-72737544 | MsG0180004066.01.T01:CDS | 35.0% | |
| CTTGTGGTCCATAATATATG+GGG | + | Chr1:72737640-72737659 | MsG0180004066.01.T01:CDS | 35.0% | |
| GACTTGTGGTCCATAATATA+TGG | + | Chr1:72737638-72737657 | MsG0180004066.01.T01:CDS | 35.0% | |
| GCCACAAATATAGTACAAAG+AGG | - | Chr1:72737848-72737867 | None:intergenic | 35.0% | |
| TAGTGAGTGATAATTGAGCA+GGG | - | Chr1:72737523-72737542 | None:intergenic | 35.0% | |
| TATGGTGCACTGAGAAAAAA+GGG | + | Chr1:72737798-72737817 | MsG0180004066.01.T01:CDS | 35.0% | |
| TCTGAATCTTCCTTCAATCA+TGG | + | Chr1:72736131-72736150 | MsG0180004066.01.T01:CDS | 35.0% | |
| TGCCTTACAATCATGATTCT+TGG | + | Chr1:72736292-72736311 | MsG0180004066.01.T01:intron | 35.0% | |
| TTATGGTGCACTGAGAAAAA+AGG | + | Chr1:72737797-72737816 | MsG0180004066.01.T01:CDS | 35.0% | |
| TTCACCATGACACTATACAA+GGG | + | Chr1:72737250-72737269 | MsG0180004066.01.T01:CDS | 35.0% | |
| TTTCACCATGACACTATACA+AGG | + | Chr1:72737249-72737268 | MsG0180004066.01.T01:CDS | 35.0% | |
| ! | AATCATGATTGTAAGGCACT+CGG | - | Chr1:72736290-72736309 | None:intergenic | 35.0% |
| ! | ATAAAAAGGTATAGCCGACT+TGG | - | Chr1:72736103-72736122 | None:intergenic | 35.0% |
| ! | CCAGATAAAGTTTTTCACCA+AGG | - | Chr1:72737889-72737908 | None:intergenic | 35.0% |
| ! | CTCTCAAGAAAGTATGCAAA+AGG | - | Chr1:72736215-72736234 | None:intergenic | 35.0% |
| ! | CTTTTGCATACTTTCTTGAG+AGG | + | Chr1:72736213-72736232 | MsG0180004066.01.T01:CDS | 35.0% |
| ! | GCTGACACTTGTTCTTTTTA+TGG | + | Chr1:72736631-72736650 | MsG0180004066.01.T01:CDS | 35.0% |
| ! | TAAAAAGGTATAGCCGACTT+GGG | - | Chr1:72736102-72736121 | None:intergenic | 35.0% |
| !! | AGAATTTTTGCTATGCTACG+TGG | - | Chr1:72737202-72737221 | None:intergenic | 35.0% |
| !! | ATCAACGAGAGTGGATTAAA+GGG | + | Chr1:72737334-72737353 | MsG0180004066.01.T01:CDS | 35.0% |
| !! | TATCAACGAGAGTGGATTAA+AGG | + | Chr1:72737333-72737352 | MsG0180004066.01.T01:CDS | 35.0% |
| AAAAGGAAACATCACAACCC+CGG | - | Chr1:72736198-72736217 | None:intergenic | 40.0% | |
| AAAATATGGCAGGATCACCA+TGG | + | Chr1:72736748-72736767 | MsG0180004066.01.T01:intron | 40.0% | |
| AACACCAGCTAAGGATATCA+AGG | - | Chr1:72737230-72737249 | None:intergenic | 40.0% | |
| AGGACTCATTCCATGATTGA+AGG | - | Chr1:72736144-72736163 | None:intergenic | 40.0% | |
| AGTTCTTCTATCAACGAGAG+TGG | + | Chr1:72737325-72737344 | MsG0180004066.01.T01:CDS | 40.0% | |
| ATACTAGCATACTTCGTCCT+TGG | + | Chr1:72737869-72737888 | MsG0180004066.01.T01:CDS | 40.0% | |
| CAGCAGCATTAAGACTCTTA+GGG | - | Chr1:72736399-72736418 | None:intergenic | 40.0% | |
| CTTGGGCTAAAACCATGATA+AGG | - | Chr1:72736085-72736104 | None:intergenic | 40.0% | |
| GACCTGTTATGAGAAACTTG+TGG | + | Chr1:72737272-72737291 | MsG0180004066.01.T01:CDS | 40.0% | |
| GCTAAAACCATGATAAGGTG+TGG | - | Chr1:72736080-72736099 | None:intergenic | 40.0% | |
| GGTCCATAATATATGGGGTT+AGG | + | Chr1:72737645-72737664 | MsG0180004066.01.T01:intron | 40.0% | |
| GTAGTGAGTGATAATTGAGC+AGG | - | Chr1:72737524-72737543 | None:intergenic | 40.0% | |
| GTGAAAAACTTTATCTGGGC+AGG | + | Chr1:72737891-72737910 | MsG0180004066.01.T01:CDS | 40.0% | |
| GTGAGTGCTAGATTCTTCAA+CGG | + | Chr1:72737029-72737048 | MsG0180004066.01.T01:intron | 40.0% | |
| TAATGACAGGGAATTGTTGG+TGG | + | Chr1:72737752-72737771 | MsG0180004066.01.T01:intron | 40.0% | |
| TCTTGTGAGATCCAAATGGA+CGG | + | Chr1:72736365-72736384 | MsG0180004066.01.T01:intron | 40.0% | |
| TGCCACAAGTTTCTCATAAC+AGG | - | Chr1:72737277-72737296 | None:intergenic | 40.0% | |
| ! | AACCCTTCAGCATGGATTAT+AGG | + | Chr1:72737605-72737624 | MsG0180004066.01.T01:CDS | 40.0% |
| ! | ACCCTTCAGCATGGATTATA+GGG | + | Chr1:72737606-72737625 | MsG0180004066.01.T01:CDS | 40.0% |
| ! | GGAAGCTATAGTGTTGAACA+TGG | - | Chr1:72736828-72736847 | None:intergenic | 40.0% |
| ! | GTTGTGCCACGTTTTCTATA+TGG | + | Chr1:72737377-72737396 | MsG0180004066.01.T01:CDS | 40.0% |
| ! | TCTAGCTTAACCAAGGTTCT+GGG | - | Chr1:72736444-72736463 | None:intergenic | 40.0% |
| ! | TTGACTTGAATGCAGGATTG+AGG | + | Chr1:72737159-72737178 | MsG0180004066.01.T01:intron | 40.0% |
| !! | AAGAGAGTTGACTTGAATGC+AGG | + | Chr1:72737152-72737171 | MsG0180004066.01.T01:intron | 40.0% |
| !! | TTCTAGCTTAACCAAGGTTC+TGG | - | Chr1:72736445-72736464 | None:intergenic | 40.0% |
| !!! | ATCATGGTTTTAGCCCAAGT+CGG | + | Chr1:72736086-72736105 | MsG0180004066.01.T01:CDS | 40.0% |
| AGCCCTATAATCCATGCTGA+AGG | - | Chr1:72737611-72737630 | None:intergenic | 45.0% | |
| AGGTCCCTTGTATAGTGTCA+TGG | - | Chr1:72737257-72737276 | None:intergenic | 45.0% | |
| CATGGTGAAAACACCAGCTA+AGG | - | Chr1:72737239-72737258 | None:intergenic | 45.0% | |
| GCAGCAGCATTAAGACTCTT+AGG | - | Chr1:72736400-72736419 | None:intergenic | 45.0% | |
| GCCCTATAATCCATGCTGAA+GGG | - | Chr1:72737610-72737629 | None:intergenic | 45.0% | |
| GTTCAAGCCACACCTTATCA+TGG | + | Chr1:72736070-72736089 | MsG0180004066.01.T01:CDS | 45.0% | |
| TCATTATTGCAGTGGCACTC+AGG | + | Chr1:72736855-72736874 | MsG0180004066.01.T01:CDS | 45.0% | |
| TTGGATCTCACAAGACTCGA+GGG | - | Chr1:72736360-72736379 | None:intergenic | 45.0% | |
| TTTGGATCTCACAAGACTCG+AGG | - | Chr1:72736361-72736380 | None:intergenic | 45.0% | |
| ! | CGAGTCTTGTGAGATCCAAA+TGG | + | Chr1:72736361-72736380 | MsG0180004066.01.T01:intron | 45.0% |
| ! | GAGTGCCACTGCAATAATGA+AGG | - | Chr1:72736855-72736874 | None:intergenic | 45.0% |
| !! | TAGGGCTCAACATTGACTTG+TGG | + | Chr1:72737624-72737643 | MsG0180004066.01.T01:CDS | 45.0% |
| !! | TAGTTTTGCAGTTGCGCACA+TGG | - | Chr1:72736335-72736354 | None:intergenic | 45.0% |
| !!! | ATTTGTATAATTTTAAAATA+TGG | + | Chr1:72736734-72736753 | MsG0180004066.01.T01:intron | 5.0% |
| GGGACCTTGATATCCTTAGC+TGG | + | Chr1:72737223-72737242 | MsG0180004066.01.T01:CDS | 50.0% | |
| TCTGGGTTCGAATCCAGCAT+TGG | - | Chr1:72736427-72736446 | None:intergenic | 50.0% | |
| TGGATTCGAACCCAGAACCT+TGG | + | Chr1:72736431-72736450 | MsG0180004066.01.T01:intron | 50.0% | |
| TTGCGCACATGGAGGATACT+CGG | - | Chr1:72736324-72736343 | None:intergenic | 50.0% | |
| ! | TGACAGGGAATTGTTGGTGG+TGG | + | Chr1:72737755-72737774 | MsG0180004066.01.T01:intron | 50.0% |
| ! | TTTTGCAGTTGCGCACATGG+AGG | - | Chr1:72736332-72736351 | None:intergenic | 50.0% |
| ACCTATCGGCATGTTCTCGC+CGG | + | Chr1:72736176-72736195 | MsG0180004066.01.T01:CDS | 55.0% | |
| GGGAGAGTTTGCCGTCCATT+TGG | - | Chr1:72736379-72736398 | None:intergenic | 55.0% | |
| TGCTGCTGCATGTCCAATGC+TGG | + | Chr1:72736411-72736430 | MsG0180004066.01.T01:intron | 55.0% | |
| CCTATCGGCATGTTCTCGCC+GGG | + | Chr1:72736177-72736196 | MsG0180004066.01.T01:CDS | 60.0% | |
| CTATCGGCATGTTCTCGCCG+GGG | + | Chr1:72736178-72736197 | MsG0180004066.01.T01:CDS | 60.0% | |
| CCCGGCGAGAACATGCCGAT+AGG | - | Chr1:72736180-72736199 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 72736023 | 72737916 | 72736023 | ID=MsG0180004066.01;Name=MsG0180004066.01 |
| Chr1 | mRNA | 72736023 | 72737916 | 72736023 | ID=MsG0180004066.01.T01;Parent=MsG0180004066.01;Name=MsG0180004066.01.T01;_AED=0.47;_eAED=0.48;_QI=6|1|0.83|1|1|1|6|0|313 |
| Chr1 | exon | 72736023 | 72736234 | 72736023 | ID=MsG0180004066.01.T01:exon:31185;Parent=MsG0180004066.01.T01 |
| Chr1 | exon | 72736616 | 72736678 | 72736616 | ID=MsG0180004066.01.T01:exon:31186;Parent=MsG0180004066.01.T01 |
| Chr1 | exon | 72736760 | 72736876 | 72736760 | ID=MsG0180004066.01.T01:exon:31187;Parent=MsG0180004066.01.T01 |
| Chr1 | exon | 72737174 | 72737411 | 72737174 | ID=MsG0180004066.01.T01:exon:31188;Parent=MsG0180004066.01.T01 |
| Chr1 | exon | 72737500 | 72737661 | 72737500 | ID=MsG0180004066.01.T01:exon:31189;Parent=MsG0180004066.01.T01 |
| Chr1 | exon | 72737761 | 72737916 | 72737761 | ID=MsG0180004066.01.T01:exon:31190;Parent=MsG0180004066.01.T01 |
| Chr1 | five_prime_UTR | 72736023 | 72736028 | 72736023 | ID=MsG0180004066.01.T01:five_prime_utr;Parent=MsG0180004066.01.T01 |
| Chr1 | CDS | 72736029 | 72736234 | 72736029 | ID=MsG0180004066.01.T01:cds;Parent=MsG0180004066.01.T01 |
| Chr1 | CDS | 72736616 | 72736678 | 72736616 | ID=MsG0180004066.01.T01:cds;Parent=MsG0180004066.01.T01 |
| Chr1 | CDS | 72736760 | 72736876 | 72736760 | ID=MsG0180004066.01.T01:cds;Parent=MsG0180004066.01.T01 |
| Chr1 | CDS | 72737174 | 72737411 | 72737174 | ID=MsG0180004066.01.T01:cds;Parent=MsG0180004066.01.T01 |
| Chr1 | CDS | 72737500 | 72737661 | 72737500 | ID=MsG0180004066.01.T01:cds;Parent=MsG0180004066.01.T01 |
| Chr1 | CDS | 72737761 | 72737916 | 72737761 | ID=MsG0180004066.01.T01:cds;Parent=MsG0180004066.01.T01 |
| Gene Sequence |
| Protein sequence |
