Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004678.01.T01 | GAU28075.1 | 80.412 | 97 | 19 | 0 | 114 | 210 | 882 | 978 | 4.67E-44 | 168 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004678.01.T01 | A0A396JCF4 | 63.504 | 137 | 16 | 1 | 74 | 210 | 1 | 103 | 1.55e-48 | 163 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180004678.01 | MsG0680034150.01 | 0.905763 | 3.042677e-80 | 4.993712e-76 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004678.01.T01 | MTR_3g114960 | 61.538 | 130 | 16 | 1 | 74 | 203 | 1 | 96 | 7.40e-46 | 148 |
| MsG0180004678.01.T01 | MTR_2g055890 | 67.010 | 97 | 32 | 0 | 114 | 210 | 157 | 253 | 3.63e-39 | 139 |
| MsG0180004678.01.T01 | MTR_5g053570 | 63.918 | 97 | 35 | 0 | 114 | 210 | 329 | 425 | 2.72e-36 | 132 |
| MsG0180004678.01.T01 | MTR_0014s0220 | 65.979 | 97 | 33 | 0 | 114 | 210 | 250 | 346 | 4.95e-36 | 134 |
| MsG0180004678.01.T01 | MTR_6g055280 | 64.045 | 89 | 31 | 1 | 123 | 210 | 6 | 94 | 5.18e-33 | 116 |
| MsG0180004678.01.T01 | MTR_3g114950 | 79.452 | 73 | 13 | 1 | 1 | 71 | 5 | 77 | 1.93e-31 | 110 |
| MsG0180004678.01.T01 | MTR_3g114950 | 79.452 | 73 | 13 | 1 | 1 | 71 | 1 | 73 | 2.01e-31 | 110 |
| MsG0180004678.01.T01 | MTR_4g037500 | 63.014 | 73 | 23 | 1 | 138 | 210 | 113 | 181 | 7.00e-26 | 102 |
| MsG0180004678.01.T01 | MTR_4g088095 | 47.000 | 100 | 49 | 2 | 114 | 210 | 84 | 182 | 4.00e-25 | 97.1 |
| MsG0180004678.01.T01 | MTR_1g092960 | 46.000 | 100 | 50 | 2 | 114 | 210 | 18 | 116 | 5.88e-25 | 94.7 |
| MsG0180004678.01.T01 | MTR_3g102890 | 47.475 | 99 | 50 | 1 | 114 | 210 | 59 | 157 | 6.23e-25 | 96.3 |
| MsG0180004678.01.T01 | MTR_5g071700 | 48.485 | 99 | 49 | 1 | 114 | 210 | 27 | 125 | 5.04e-24 | 98.6 |
| MsG0180004678.01.T01 | MTR_0073s0010 | 46.000 | 100 | 52 | 1 | 113 | 210 | 92 | 191 | 9.56e-24 | 95.1 |
| MsG0180004678.01.T01 | MTR_5g032840 | 39.831 | 118 | 59 | 2 | 95 | 210 | 9 | 116 | 1.67e-23 | 97.1 |
| MsG0180004678.01.T01 | MTR_3g113230 | 45.000 | 100 | 53 | 1 | 113 | 210 | 107 | 206 | 2.05e-23 | 94.4 |
| MsG0180004678.01.T01 | MTR_7g022020 | 46.465 | 99 | 51 | 1 | 114 | 210 | 241 | 339 | 2.35e-22 | 94.7 |
| MsG0180004678.01.T01 | MTR_7g050355 | 46.000 | 100 | 50 | 2 | 114 | 210 | 269 | 367 | 2.62e-22 | 94.7 |
| MsG0180004678.01.T01 | MTR_3g048710 | 41.837 | 98 | 55 | 1 | 115 | 210 | 16 | 113 | 1.06e-21 | 87.4 |
| MsG0180004678.01.T01 | MTR_4g076760 | 40.708 | 113 | 61 | 2 | 104 | 210 | 114 | 226 | 2.60e-21 | 91.7 |
| MsG0180004678.01.T01 | MTR_1g021210 | 44.000 | 100 | 54 | 1 | 113 | 210 | 282 | 381 | 2.63e-21 | 91.7 |
| MsG0180004678.01.T01 | MTR_0631s0010 | 45.455 | 99 | 52 | 1 | 114 | 210 | 146 | 244 | 2.71e-21 | 89.0 |
| MsG0180004678.01.T01 | MTR_7g027013 | 47.475 | 99 | 50 | 2 | 114 | 210 | 389 | 487 | 2.76e-21 | 91.7 |
| MsG0180004678.01.T01 | MTR_3g109055 | 43.434 | 99 | 54 | 1 | 114 | 210 | 67 | 165 | 4.82e-21 | 87.4 |
| MsG0180004678.01.T01 | MTR_2g016390 | 41.593 | 113 | 60 | 2 | 104 | 210 | 93 | 205 | 8.02e-21 | 90.5 |
| MsG0180004678.01.T01 | MTR_4g086180 | 44.792 | 96 | 49 | 1 | 115 | 210 | 86 | 177 | 9.75e-21 | 89.7 |
| MsG0180004678.01.T01 | MTR_0003s0260 | 62.121 | 66 | 25 | 0 | 113 | 178 | 161 | 226 | 1.13e-20 | 86.7 |
| MsG0180004678.01.T01 | MTR_1g054110 | 41.237 | 97 | 55 | 1 | 116 | 210 | 69 | 165 | 3.33e-20 | 85.9 |
| MsG0180004678.01.T01 | MTR_0003s0410 | 45.833 | 96 | 48 | 1 | 115 | 210 | 188 | 279 | 3.93e-20 | 88.2 |
| MsG0180004678.01.T01 | MTR_0002s0870 | 44.565 | 92 | 49 | 1 | 121 | 210 | 61 | 152 | 5.51e-20 | 86.7 |
| MsG0180004678.01.T01 | MTR_8g071880 | 43.434 | 99 | 54 | 1 | 114 | 210 | 405 | 503 | 7.63e-20 | 87.4 |
| MsG0180004678.01.T01 | MTR_4g123460 | 45.652 | 92 | 47 | 2 | 117 | 206 | 110 | 200 | 8.48e-20 | 83.6 |
| MsG0180004678.01.T01 | MTR_1g057360 | 45.455 | 99 | 52 | 1 | 114 | 210 | 40 | 138 | 2.19e-19 | 85.1 |
| MsG0180004678.01.T01 | MTR_3g034020 | 41.176 | 102 | 54 | 2 | 113 | 210 | 74 | 173 | 2.31e-19 | 85.9 |
| MsG0180004678.01.T01 | MTR_6g024100 | 41.237 | 97 | 52 | 1 | 114 | 210 | 15 | 106 | 6.09e-19 | 82.4 |
| MsG0180004678.01.T01 | MTR_2g049690 | 47.126 | 87 | 40 | 2 | 128 | 210 | 92 | 176 | 1.46e-18 | 82.8 |
| MsG0180004678.01.T01 | MTR_1g012040 | 42.424 | 99 | 55 | 1 | 114 | 210 | 84 | 182 | 2.96e-18 | 82.8 |
| MsG0180004678.01.T01 | MTR_7g062790 | 42.857 | 84 | 46 | 1 | 128 | 209 | 86 | 169 | 5.86e-18 | 80.1 |
| MsG0180004678.01.T01 | MTR_7g034270 | 41.667 | 96 | 54 | 1 | 113 | 206 | 84 | 179 | 2.99e-17 | 79.3 |
| MsG0180004678.01.T01 | MTR_4g036720 | 45.455 | 77 | 42 | 0 | 113 | 189 | 92 | 168 | 9.27e-17 | 76.6 |
| MsG0180004678.01.T01 | MTR_2g089470 | 42.105 | 95 | 53 | 1 | 114 | 206 | 447 | 541 | 9.44e-17 | 78.6 |
| MsG0180004678.01.T01 | MTR_2g068990 | 42.105 | 95 | 53 | 1 | 114 | 206 | 447 | 541 | 9.44e-17 | 78.6 |
| MsG0180004678.01.T01 | MTR_5g040660 | 38.889 | 90 | 43 | 1 | 121 | 210 | 84 | 161 | 1.03e-16 | 75.1 |
| MsG0180004678.01.T01 | MTR_4g120080 | 43.158 | 95 | 52 | 1 | 114 | 206 | 442 | 536 | 2.38e-16 | 77.4 |
| MsG0180004678.01.T01 | MTR_8g469370 | 42.353 | 85 | 47 | 1 | 128 | 210 | 158 | 242 | 5.69e-16 | 75.9 |
| MsG0180004678.01.T01 | MTR_5g077050 | 50.725 | 69 | 34 | 0 | 114 | 182 | 114 | 182 | 1.28e-15 | 72.8 |
| MsG0180004678.01.T01 | MTR_1g033220 | 38.144 | 97 | 55 | 1 | 114 | 210 | 15 | 106 | 2.63e-15 | 73.2 |
| MsG0180004678.01.T01 | MTR_5g020370 | 36.735 | 98 | 44 | 2 | 114 | 209 | 105 | 186 | 2.93e-15 | 73.6 |
| MsG0180004678.01.T01 | MTR_2g066670 | 44.156 | 77 | 41 | 1 | 136 | 210 | 50 | 126 | 3.46e-15 | 73.6 |
| MsG0180004678.01.T01 | MTR_0356s0050 | 49.180 | 61 | 31 | 0 | 128 | 188 | 64 | 124 | 9.61e-15 | 70.5 |
| MsG0180004678.01.T01 | MTR_1g107470 | 35.652 | 115 | 51 | 4 | 100 | 210 | 46 | 141 | 1.38e-13 | 68.9 |
| MsG0180004678.01.T01 | MTR_7g031700 | 44.595 | 74 | 39 | 1 | 114 | 185 | 147 | 220 | 1.70e-13 | 68.6 |
| MsG0180004678.01.T01 | MTR_2g064230 | 37.000 | 100 | 40 | 2 | 113 | 210 | 42 | 120 | 3.48e-13 | 68.2 |
| MsG0180004678.01.T01 | MTR_5g054110 | 44.444 | 63 | 31 | 1 | 148 | 210 | 1 | 59 | 3.73e-13 | 65.1 |
| MsG0180004678.01.T01 | MTR_6g082730 | 43.077 | 65 | 37 | 0 | 121 | 185 | 84 | 148 | 3.77e-13 | 65.1 |
| MsG0180004678.01.T01 | MTR_7g070715 | 44.595 | 74 | 41 | 0 | 115 | 188 | 108 | 181 | 5.02e-13 | 67.4 |
| MsG0180004678.01.T01 | MTR_2g008505 | 43.243 | 74 | 42 | 0 | 115 | 188 | 108 | 181 | 1.86e-12 | 65.5 |
| MsG0180004678.01.T01 | MTR_0003s0390 | 35.000 | 100 | 52 | 2 | 113 | 210 | 132 | 220 | 2.61e-12 | 65.1 |
| MsG0180004678.01.T01 | MTR_6g029550 | 41.176 | 68 | 40 | 0 | 117 | 184 | 21 | 88 | 6.10e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 33 sgRNAs with CRISPR-Local
Find 72 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTAACCAAGTTGATAGTT+TGG | 0.294275 | 1:-81133388 | MsG0180004678.01.T01:CDS |
| ATTAACCAAGTTGATAGTTT+GGG | 0.350971 | 1:-81133387 | MsG0180004678.01.T01:CDS |
| AATTTAGGGTGATACGATTC+TGG | 0.363554 | 1:-81134649 | MsG0180004678.01.T01:intron |
| ATGACTCAAGTGTAGGTATT+GGG | 0.372254 | 1:+81133456 | None:intergenic |
| TAGCAGTAATGACGTGATTC+CGG | 0.390263 | 1:+81133514 | None:intergenic |
| GTCTTGACAGTTGCTATATC+CGG | 0.412982 | 1:-81133533 | MsG0180004678.01.T01:intron |
| TCAACATGCGATATAGATAA+AGG | 0.413172 | 1:-81133434 | MsG0180004678.01.T01:CDS |
| TTGTTCGTATTCTTGATGTA+TGG | 0.421421 | 1:-81134810 | MsG0180004678.01.T01:CDS |
| GAATGTATTGTTTGATCTCT+AGG | 0.429691 | 1:+81133491 | None:intergenic |
| GGGTAATGAACATCTTGAAA+TGG | 0.456141 | 1:-81134770 | MsG0180004678.01.T01:CDS |
| CCTTACTCATGCATTGATCA+AGG | 0.459654 | 1:-81133710 | MsG0180004678.01.T01:CDS |
| ACATCTTGAAATGGTTATGA+TGG | 0.460858 | 1:-81134761 | MsG0180004678.01.T01:CDS |
| TACAACCAAAACAAAATCTC+TGG | 0.468366 | 1:-81133748 | MsG0180004678.01.T01:CDS |
| AAACAAAACTTGTGAGCCAT+TGG | 0.473349 | 1:+81133356 | None:intergenic |
| AATGGTTATGATGGATTCAA+AGG | 0.486827 | 1:-81134752 | MsG0180004678.01.T01:intron |
| CAATGACTCTTAAGGAAACA+TGG | 0.504014 | 1:-81134840 | MsG0180004678.01.T01:CDS |
| CCTTGATCAATGCATGAGTA+AGG | 0.504848 | 1:+81133710 | None:intergenic |
| TTCATCCCAAACTATCAACT+TGG | 0.517775 | 1:+81133382 | None:intergenic |
| GATGACTCAAGTGTAGGTAT+TGG | 0.534153 | 1:+81133455 | None:intergenic |
| GTGGTGGTCACACATCTGAA+TGG | 0.551131 | 1:-81134617 | MsG0180004678.01.T01:CDS |
| TGGTCACACATCTGAATGGA+AGG | 0.568427 | 1:-81134613 | MsG0180004678.01.T01:CDS |
| GAATGGAAGGGAAAGATCAA+AGG | 0.574476 | 1:-81134600 | MsG0180004678.01.T01:CDS |
| CATGTTGATGACTCAAGTGT+AGG | 0.584506 | 1:+81133449 | None:intergenic |
| ATGGAGTGTTGTCAATAGCA+AGG | 0.589997 | 1:-81134791 | MsG0180004678.01.T01:CDS |
| AGTTTGGGATGAAGCTCCAA+TGG | 0.596873 | 1:-81133372 | MsG0180004678.01.T01:CDS |
| TGGAGTGTTGTCAATAGCAA+GGG | 0.607318 | 1:-81134790 | MsG0180004678.01.T01:CDS |
| ACACTCAAAGACATAATGAT+CGG | 0.618640 | 1:-81133317 | MsG0180004678.01.T01:CDS |
| ACGATTCTGGCTCTGATCCG+TGG | 0.635981 | 1:-81134636 | MsG0180004678.01.T01:CDS |
| ATGACGTGTATCATCAACAA+TGG | 0.659985 | 1:-81134573 | MsG0180004678.01.T01:CDS |
| GGTCACACATCTGAATGGAA+GGG | 0.660205 | 1:-81134612 | MsG0180004678.01.T01:CDS |
| ATTCTGGCTCTGATCCGTGG+TGG | 0.693076 | 1:-81134633 | MsG0180004678.01.T01:CDS |
| ATTCAGATGTGTGACCACCA+CGG | 0.715063 | 1:+81134619 | None:intergenic |
| GCATTGATCAAGGATGCACA+AGG | 0.719197 | 1:-81133700 | MsG0180004678.01.T01:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAATTTTCATTTAAAAACT+TGG | + | Chr1:81133833-81133852 | None:intergenic | 10.0% |
| !!! | ATCAATATCAATTTTTTTTA+AGG | - | Chr1:81134074-81134093 | MsG0180004678.01.T01:intron | 10.0% |
| !!! | CAACTATTTTTTTCAATTTA+GGG | - | Chr1:81133434-81133453 | MsG0180004678.01.T01:CDS | 15.0% |
| !!! | TCAACTATTTTTTTCAATTT+AGG | - | Chr1:81133433-81133452 | MsG0180004678.01.T01:CDS | 15.0% |
| !! | AAGTCTTCATCAAAAATATT+TGG | - | Chr1:81134807-81134826 | MsG0180004678.01.T01:CDS | 20.0% |
| !! | AGTAGAAACTAAAATAAAAC+AGG | + | Chr1:81133891-81133910 | None:intergenic | 20.0% |
| !! | TCAAAAAAATTTGTGTTTCT+TGG | - | Chr1:81133590-81133609 | MsG0180004678.01.T01:intron | 20.0% |
| !!! | TATTATTATTAGTCTTAGCT+AGG | - | Chr1:81134434-81134453 | MsG0180004678.01.T01:intron | 20.0% |
| ! | AAAAAATTTGTGTTTCTTGG+TGG | - | Chr1:81133593-81133612 | MsG0180004678.01.T01:intron | 25.0% |
| ! | AATCAATTCATGACAAATGA+TGG | + | Chr1:81134221-81134240 | None:intergenic | 25.0% |
| ! | ACATTAATCAATGATGCAAA+TGG | + | Chr1:81134476-81134495 | None:intergenic | 25.0% |
| ! | ATACATTCATATATGAGTCT+TGG | + | Chr1:81133810-81133829 | None:intergenic | 25.0% |
| ! | ATCAATTCATGACAAATGAT+GGG | + | Chr1:81134220-81134239 | None:intergenic | 25.0% |
| ! | CAACTATTAACAGTTTCAAA+TGG | - | Chr1:81134502-81134521 | MsG0180004678.01.T01:intron | 25.0% |
| ! | CTTCATCAAAAATATTTGGA+GGG | - | Chr1:81134811-81134830 | MsG0180004678.01.T01:CDS | 25.0% |
| ! | TATTAACAGTTTCAAATGGT+TGG | - | Chr1:81134506-81134525 | MsG0180004678.01.T01:intron | 25.0% |
| ! | TCTTCATCAAAAATATTTGG+AGG | - | Chr1:81134810-81134829 | MsG0180004678.01.T01:CDS | 25.0% |
| !! | ATATGATTAACTGCACTTTT+TGG | - | Chr1:81134296-81134315 | MsG0180004678.01.T01:intron | 25.0% |
| !! | GCATCATTGATTAATGTTTA+TGG | - | Chr1:81134479-81134498 | MsG0180004678.01.T01:intron | 25.0% |
| !!! | AATTAACCAAGTTGATAGTT+TGG | - | Chr1:81134709-81134728 | MsG0180004678.01.T01:intron | 25.0% |
| !!! | ACAAAAGCGATACTTTTTTA+AGG | - | Chr1:81133652-81133671 | MsG0180004678.01.T01:intron | 25.0% |
| !!! | ACAAGTTTTGTTTTGAAACA+TGG | - | Chr1:81134751-81134770 | MsG0180004678.01.T01:intron | 25.0% |
| !!! | ATTAACCAAGTTGATAGTTT+GGG | - | Chr1:81134710-81134729 | MsG0180004678.01.T01:intron | 25.0% |
| !!! | CAAGTTTTGTTTTGAAACAT+GGG | - | Chr1:81134752-81134771 | MsG0180004678.01.T01:intron | 25.0% |
| !!! | TATGATTAACTGCACTTTTT+GGG | - | Chr1:81134297-81134316 | MsG0180004678.01.T01:intron | 25.0% |
| !!! | TGTTTTGGTTGTAGTAATTT+AGG | + | Chr1:81134342-81134361 | None:intergenic | 25.0% |
| !!! | TTAAAAAAGTATCGCTTTTG+TGG | + | Chr1:81133653-81133672 | None:intergenic | 25.0% |
| ACACTCAAAGACATAATGAT+CGG | - | Chr1:81134780-81134799 | MsG0180004678.01.T01:CDS | 30.0% | |
| ACATCTTGAAATGGTTATGA+TGG | - | Chr1:81133336-81133355 | MsG0180004678.01.T01:CDS | 30.0% | |
| GAATGTATTGTTTGATCTCT+AGG | + | Chr1:81134609-81134628 | None:intergenic | 30.0% | |
| TACAACCAAAACAAAATCTC+TGG | - | Chr1:81134349-81134368 | MsG0180004678.01.T01:intron | 30.0% | |
| TCAACATGCGATATAGATAA+AGG | - | Chr1:81134663-81134682 | MsG0180004678.01.T01:intron | 30.0% | |
| TTGTTCGTATTCTTGATGTA+TGG | - | Chr1:81133287-81133306 | MsG0180004678.01.T01:CDS | 30.0% | |
| TTTCAAAACTGTCTACATAG+TGG | - | Chr1:81134271-81134290 | MsG0180004678.01.T01:intron | 30.0% | |
| ! | ATTTTGCTGAGATCCTTAAA+GGG | - | Chr1:81133675-81133694 | MsG0180004678.01.T01:intron | 30.0% |
| ! | GGAGGGAATGTAATTATTTT+CGG | - | Chr1:81134828-81134847 | MsG0180004678.01.T01:CDS | 30.0% |
| !! | AATGGTTATGATGGATTCAA+AGG | - | Chr1:81133345-81133364 | MsG0180004678.01.T01:CDS | 30.0% |
| !! | GCAAGTTGATATATGCTTTA+TGG | - | Chr1:81134192-81134211 | MsG0180004678.01.T01:intron | 30.0% |
| AAACAAAACTTGTGAGCCAT+TGG | + | Chr1:81134744-81134763 | None:intergenic | 35.0% | |
| ACAGTTTCAAATGGTTGGAA+TGG | - | Chr1:81134511-81134530 | MsG0180004678.01.T01:intron | 35.0% | |
| ATGACGTGTATCATCAACAA+TGG | - | Chr1:81133524-81133543 | MsG0180004678.01.T01:CDS | 35.0% | |
| ATGACTCAAGTGTAGGTATT+GGG | + | Chr1:81134644-81134663 | None:intergenic | 35.0% | |
| CAATGACTCTTAAGGAAACA+TGG | - | Chr1:81133257-81133276 | MsG0180004678.01.T01:CDS | 35.0% | |
| GGGTAATGAACATCTTGAAA+TGG | - | Chr1:81133327-81133346 | MsG0180004678.01.T01:CDS | 35.0% | |
| TTCATCCCAAACTATCAACT+TGG | + | Chr1:81134718-81134737 | None:intergenic | 35.0% | |
| TTGACAGAGTCTTACAACAA+TGG | + | Chr1:81134028-81134047 | None:intergenic | 35.0% | |
| ! | AATTTAGGGTGATACGATTC+TGG | - | Chr1:81133448-81133467 | MsG0180004678.01.T01:CDS | 35.0% |
| ! | GATTTTGCTGAGATCCTTAA+AGG | - | Chr1:81133674-81133693 | MsG0180004678.01.T01:intron | 35.0% |
| ! | GGGAATGTAATTATTTTCGG+TGG | - | Chr1:81134831-81134850 | MsG0180004678.01.T01:CDS | 35.0% |
| !! | TAGCACCAGAGATTTTGTTT+TGG | + | Chr1:81134357-81134376 | None:intergenic | 35.0% |
| AAGGGAACTGCAAGTTAGAA+AGG | - | Chr1:81133693-81133712 | MsG0180004678.01.T01:intron | 40.0% | |
| CCTTGATCAATGCATGAGTA+AGG | + | Chr1:81134390-81134409 | None:intergenic | 40.0% | |
| GAATGGAAGGGAAAGATCAA+AGG | - | Chr1:81133497-81133516 | MsG0180004678.01.T01:CDS | 40.0% | |
| GATGACTCAAGTGTAGGTAT+TGG | + | Chr1:81134645-81134664 | None:intergenic | 40.0% | |
| GTCTTGACAGTTGCTATATC+CGG | - | Chr1:81134564-81134583 | MsG0180004678.01.T01:intron | 40.0% | |
| GTGGTATGTCTTTCATCTCT+TGG | + | Chr1:81133634-81133653 | None:intergenic | 40.0% | |
| TAGCAGTAATGACGTGATTC+CGG | + | Chr1:81134586-81134605 | None:intergenic | 40.0% | |
| TGCAAGTTAGAAAGGCTTGA+AGG | - | Chr1:81133701-81133720 | MsG0180004678.01.T01:CDS | 40.0% | |
| ! | CCTTACTCATGCATTGATCA+AGG | - | Chr1:81134387-81134406 | MsG0180004678.01.T01:intron | 40.0% |
| ! | CTAACTTGCAGTTCCCTTTA+AGG | + | Chr1:81133691-81133710 | None:intergenic | 40.0% |
| !! | ATGGAGTGTTGTCAATAGCA+AGG | - | Chr1:81133306-81133325 | MsG0180004678.01.T01:CDS | 40.0% |
| !! | CATGTTGATGACTCAAGTGT+AGG | + | Chr1:81134651-81134670 | None:intergenic | 40.0% |
| !! | TGCACTTTTTGGGAAAGCTA+TGG | - | Chr1:81134307-81134326 | MsG0180004678.01.T01:intron | 40.0% |
| !! | TGGAGTGTTGTCAATAGCAA+GGG | - | Chr1:81133307-81133326 | MsG0180004678.01.T01:CDS | 40.0% |
| ATTCAGATGTGTGACCACCA+CGG | + | Chr1:81133481-81133500 | None:intergenic | 45.0% | |
| GGTCACACATCTGAATGGAA+GGG | - | Chr1:81133485-81133504 | MsG0180004678.01.T01:CDS | 45.0% | |
| TGGTCACACATCTGAATGGA+AGG | - | Chr1:81133484-81133503 | MsG0180004678.01.T01:CDS | 45.0% | |
| ! | AGTTTGGGATGAAGCTCCAA+TGG | - | Chr1:81134725-81134744 | MsG0180004678.01.T01:intron | 45.0% |
| ! | GCATTGATCAAGGATGCACA+AGG | - | Chr1:81134397-81134416 | MsG0180004678.01.T01:intron | 45.0% |
| GTGGTGGTCACACATCTGAA+TGG | - | Chr1:81133480-81133499 | MsG0180004678.01.T01:CDS | 50.0% | |
| !! | ACGATTCTGGCTCTGATCCG+TGG | - | Chr1:81133461-81133480 | MsG0180004678.01.T01:CDS | 55.0% |
| !! | ATTCTGGCTCTGATCCGTGG+TGG | - | Chr1:81133464-81133483 | MsG0180004678.01.T01:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 81133253 | 81134866 | 81133253 | ID=MsG0180004678.01;Name=MsG0180004678.01 |
| Chr1 | mRNA | 81133253 | 81134866 | 81133253 | ID=MsG0180004678.01.T01;Parent=MsG0180004678.01;Name=MsG0180004678.01.T01;_AED=0.28;_eAED=0.28;_QI=0|0|0|0.75|1|0.75|4|0|210 |
| Chr1 | exon | 81134753 | 81134866 | 81134753 | ID=MsG0180004678.01.T01:exon:8338;Parent=MsG0180004678.01.T01 |
| Chr1 | exon | 81134567 | 81134664 | 81134567 | ID=MsG0180004678.01.T01:exon:8337;Parent=MsG0180004678.01.T01 |
| Chr1 | exon | 81133701 | 81133828 | 81133701 | ID=MsG0180004678.01.T01:exon:8336;Parent=MsG0180004678.01.T01 |
| Chr1 | exon | 81133253 | 81133545 | 81133253 | ID=MsG0180004678.01.T01:exon:8335;Parent=MsG0180004678.01.T01 |
| Chr1 | CDS | 81134753 | 81134866 | 81134753 | ID=MsG0180004678.01.T01:cds;Parent=MsG0180004678.01.T01 |
| Chr1 | CDS | 81134567 | 81134664 | 81134567 | ID=MsG0180004678.01.T01:cds;Parent=MsG0180004678.01.T01 |
| Chr1 | CDS | 81133701 | 81133828 | 81133701 | ID=MsG0180004678.01.T01:cds;Parent=MsG0180004678.01.T01 |
| Chr1 | CDS | 81133253 | 81133545 | 81133253 | ID=MsG0180004678.01.T01:cds;Parent=MsG0180004678.01.T01 |
| Gene Sequence |
| Protein sequence |
