AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680034150.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680034150.01.T01 MTR_4g062370 65.328 274 88 2 162 433 21 289 1.56e-119 373
MsG0680034150.01.T01 MTR_4g062370 31.839 223 147 3 405 627 32 249 1.30e-29 125
MsG0680034150.01.T01 MTR_1g105765 60.173 231 92 0 162 392 18 248 9.59e-100 306
MsG0680034150.01.T01 MTR_1g105765 30.932 236 159 1 414 649 37 268 1.03e-42 155
MsG0680034150.01.T01 MTR_1g105780 59.740 231 93 0 162 392 18 248 1.87e-99 305
MsG0680034150.01.T01 MTR_1g105780 30.508 236 160 1 414 649 37 268 1.80e-42 155
MsG0680034150.01.T01 MTR_4g032560 51.698 265 119 3 136 395 19 279 1.59e-90 283
MsG0680034150.01.T01 MTR_4g032560 30.638 235 159 2 415 649 66 296 8.20e-37 140
MsG0680034150.01.T01 MTR_4g032580 51.321 265 120 3 136 395 19 279 7.82e-90 281
MsG0680034150.01.T01 MTR_4g032580 31.064 235 158 2 415 649 66 296 6.27e-38 143
MsG0680034150.01.T01 MTR_7g110090 52.439 246 117 0 162 407 17 262 1.52e-86 272
MsG0680034150.01.T01 MTR_7g110090 31.048 248 167 2 402 649 24 267 1.10e-37 141
MsG0680034150.01.T01 MTR_3g085990 52.814 231 72 4 163 393 19 212 3.93e-71 230
MsG0680034150.01.T01 MTR_3g085990 26.471 238 134 2 414 651 37 233 1.90e-28 114
MsG0680034150.01.T01 MTR_3g070250 42.913 254 140 1 147 395 7 260 9.30e-67 221
MsG0680034150.01.T01 MTR_3g070250 28.750 240 166 2 414 650 41 278 1.47e-29 119
MsG0680034150.01.T01 MTR_1g047540 44.635 233 114 1 163 395 18 235 1.32e-63 218
MsG0680034150.01.T01 MTR_1g047540 30.213 235 145 3 415 649 37 252 4.20e-28 119
MsG0680034150.01.T01 MTR_1g084880 43.983 241 126 3 162 395 17 255 2.65e-60 203
MsG0680034150.01.T01 MTR_1g084880 31.727 249 155 3 407 645 25 268 2.65e-33 129
MsG0680034150.01.T01 MTR_3g048970 43.568 241 127 3 162 395 17 255 8.75e-60 202
MsG0680034150.01.T01 MTR_3g048970 31.727 249 155 3 407 645 25 268 4.57e-33 129
MsG0680034150.01.T01 MTR_1g069260 40.323 248 114 2 158 393 40 265 4.35e-59 200
MsG0680034150.01.T01 MTR_1g069260 26.400 250 146 3 415 652 64 287 3.94e-25 106
MsG0680034150.01.T01 MTR_2g100360 39.241 237 137 2 162 392 17 252 9.14e-55 188
MsG0680034150.01.T01 MTR_2g100360 35.398 226 140 3 414 636 36 258 1.12e-34 133
MsG0680034150.01.T01 MTR_3g452180 49.133 173 88 0 235 407 6 178 5.25e-54 183
MsG0680034150.01.T01 MTR_3g452180 31.148 183 122 2 467 649 5 183 1.48e-27 110
MsG0680034150.01.T01 MTR_2g038740 43.498 223 121 1 164 381 19 241 1.57e-50 187
MsG0680034150.01.T01 MTR_2g038740 31.429 210 137 3 413 618 35 241 9.80e-23 103
MsG0680034150.01.T01 MTR_4g117740 47.590 166 58 1 197 362 63 199 4.85e-45 159
MsG0680034150.01.T01 MTR_4g117740 28.994 169 87 2 430 598 63 198 1.37e-16 79.0
MsG0680034150.01.T01 MTR_1g087870 40.500 200 114 1 198 392 1 200 1.90e-44 160
MsG0680034150.01.T01 MTR_1g087870 28.194 227 156 2 431 653 1 224 1.10e-30 121
MsG0680034150.01.T01 MTR_5g075200 50.769 130 64 0 196 325 64 193 1.02e-41 150
MsG0680034150.01.T01 MTR_5g075200 34.058 138 87 2 425 562 60 193 2.44e-17 81.3
MsG0680034150.01.T01 MTR_0521s0010 40.191 209 102 4 160 361 9 201 2.01e-41 150
MsG0680034150.01.T01 MTR_0521s0010 26.263 198 127 3 407 599 19 202 1.24e-15 77.0
MsG0680034150.01.T01 MTR_8g043700 69.767 86 20 1 162 241 18 103 1.06e-35 130
MsG0680034150.01.T01 MTR_7g108360 72.500 80 22 0 162 241 16 95 1.95e-35 129
MsG0680034150.01.T01 MTR_5g066660 32.618 233 128 3 162 393 17 221 2.92e-35 135
MsG0680034150.01.T01 MTR_5g066660 28.879 232 134 3 414 645 36 236 8.83e-23 99.0
MsG0680034150.01.T01 MTR_6g066070 55.769 104 46 0 162 265 17 120 9.73e-34 125
MsG0680034150.01.T01 MTR_4g121040 37.805 164 102 0 248 411 7 170 1.94e-33 127
MsG0680034150.01.T01 MTR_4g121040 28.743 167 115 2 481 647 7 169 1.17e-16 79.3
MsG0680034150.01.T01 MTR_2g055890 63.265 98 36 0 65 162 153 250 1.05e-32 131
MsG0680034150.01.T01 MTR_5g094740 50.781 128 59 1 266 393 673 796 2.00e-32 134
MsG0680034150.01.T01 MTR_5g094740 25.325 154 107 2 499 652 673 818 8.24e-14 75.5
MsG0680034150.01.T01 MTR_1g052720 32.569 218 143 3 182 397 40 255 4.34e-31 124
MsG0680034150.01.T01 MTR_1g052720 28.000 225 156 2 415 638 40 259 1.71e-22 99.0
MsG0680034150.01.T01 MTR_2g435890 41.781 146 66 2 162 307 17 143 6.70e-31 119
MsG0680034150.01.T01 MTR_5g053570 50.758 132 59 3 36 162 292 422 3.56e-30 124
MsG0680034150.01.T01 MTR_0014s0220 62.245 98 37 0 65 162 246 343 4.13e-30 127
MsG0680034150.01.T01 MTR_6g465600 29.565 230 156 2 167 392 28 255 2.30e-28 116
MsG0680034150.01.T01 MTR_6g465600 26.749 243 160 4 403 638 33 264 8.23e-23 100
MsG0680034150.01.T01 MTR_3g114950 78.082 73 14 1 1 71 1 73 4.90e-28 107
MsG0680034150.01.T01 MTR_3g114950 78.082 73 14 1 1 71 5 77 5.29e-28 107
MsG0680034150.01.T01 MTR_8g085330 48.182 110 54 1 164 273 48 154 5.93e-28 114
MsG0680034150.01.T01 MTR_6g055280 62.791 86 31 1 78 162 6 91 2.26e-27 108
MsG0680034150.01.T01 MTR_4g053887 39.490 157 58 2 157 313 2 121 5.86e-27 107
MsG0680034150.01.T01 MTR_1g019580 50.943 106 52 0 288 393 1 106 8.93e-26 103
MsG0680034150.01.T01 MTR_1g019580 29.457 129 87 1 521 649 1 125 6.87e-17 77.8
MsG0680034150.01.T01 MTR_0007s0090 38.411 151 61 2 161 310 693 812 1.78e-25 112
MsG0680034150.01.T01 MTR_3g449750 38.194 144 84 1 241 379 32 175 1.11e-23 99.0
MsG0680034150.01.T01 MTR_3g449750 26.207 145 90 2 474 609 32 168 1.24e-12 67.4
MsG0680034150.01.T01 MTR_0246s0040 25.455 220 140 2 185 404 72 267 1.34e-23 102
MsG0680034150.01.T01 MTR_0246s0040 23.077 273 170 4 378 650 44 276 2.66e-16 80.9
MsG0680034150.01.T01 MTR_3g114960 83.333 54 9 0 105 158 43 96 2.92e-23 95.9
MsG0680034150.01.T01 MTR_4g088095 36.986 146 71 4 20 162 52 179 5.53e-21 91.3
MsG0680034150.01.T01 MTR_1g092960 42.056 107 55 3 59 162 11 113 1.02e-20 88.6
MsG0680034150.01.T01 MTR_0317s0030 43.421 76 43 0 162 237 17 92 1.05e-20 87.4
MsG0680034150.01.T01 MTR_4g013250 48.000 75 39 0 159 233 16 90 1.52e-20 87.4
MsG0680034150.01.T01 MTR_4g037500 60.000 70 24 1 93 162 113 178 5.06e-20 92.4
MsG0680034150.01.T01 MTR_3g102890 45.000 100 53 1 65 162 55 154 8.42e-20 87.4
MsG0680034150.01.T01 MTR_2g016390 30.348 201 113 2 195 395 515 688 9.74e-20 94.4
MsG0680034150.01.T01 MTR_2g016390 43.000 100 55 2 65 162 103 202 1.44e-15 80.9
MsG0680034150.01.T01 MTR_3g113230 43.000 100 55 1 65 162 104 203 1.75e-19 89.0
MsG0680034150.01.T01 MTR_0073s0010 44.000 100 54 1 65 162 89 188 3.30e-19 87.8
MsG0680034150.01.T01 MTR_4g123460 40.833 120 60 4 49 161 85 200 4.12e-19 86.7
MsG0680034150.01.T01 MTR_5g071700 45.000 100 53 1 65 162 23 122 7.59e-19 90.1
MsG0680034150.01.T01 MTR_0003s0260 60.870 69 27 0 65 133 158 226 8.37e-19 86.3
MsG0680034150.01.T01 MTR_5g032840 38.889 108 61 2 57 162 9 113 5.34e-18 87.4
MsG0680034150.01.T01 MTR_7g022020 40.678 118 66 2 49 162 219 336 6.71e-18 88.2
MsG0680034150.01.T01 MTR_7g050355 40.000 110 62 2 56 162 256 364 1.01e-17 87.4
MsG0680034150.01.T01 MTR_3g109055 47.500 80 42 0 65 144 63 142 1.58e-17 82.4
MsG0680034150.01.T01 MTR_7g034270 42.424 99 55 1 65 161 81 179 2.25e-17 84.7
MsG0680034150.01.T01 MTR_1g021210 42.000 100 56 1 65 162 279 378 2.41e-17 86.3
MsG0680034150.01.T01 MTR_8g071880 42.000 100 56 1 65 162 401 500 3.00e-17 85.9
MsG0680034150.01.T01 MTR_3g048710 39.000 100 59 1 65 162 11 110 3.18e-17 79.7
MsG0680034150.01.T01 MTR_0091s0090 28.415 183 118 3 225 406 2 172 6.38e-17 81.6
MsG0680034150.01.T01 MTR_2g089470 42.424 99 55 1 65 161 443 541 8.59e-17 85.1
MsG0680034150.01.T01 MTR_2g068990 42.424 99 55 1 65 161 443 541 8.59e-17 85.1
MsG0680034150.01.T01 MTR_6g024100 40.426 94 54 1 65 156 11 104 9.36e-17 80.9
MsG0680034150.01.T01 MTR_7g027013 44.000 100 54 1 65 162 385 484 1.10e-16 84.3
MsG0680034150.01.T01 MTR_4g120080 43.434 99 54 1 65 161 438 536 2.29e-16 83.6
MsG0680034150.01.T01 MTR_1g097230 74.468 47 12 0 156 202 13 59 3.52e-16 76.3
MsG0680034150.01.T01 MTR_4g036720 46.835 79 42 0 65 143 89 167 4.37e-16 79.0
MsG0680034150.01.T01 MTR_0631s0010 41.000 100 57 1 65 162 142 241 6.96e-16 78.6
MsG0680034150.01.T01 MTR_4g074500 56.667 60 26 0 160 219 12 71 7.54e-16 75.5
MsG0680034150.01.T01 MTR_4g076760 42.000 100 56 2 65 162 124 223 1.13e-15 80.9
MsG0680034150.01.T01 MTR_4g086180 41.935 93 50 1 70 162 86 174 1.35e-15 80.1
MsG0680034150.01.T01 MTR_7g016070 57.407 54 23 0 202 255 1 54 1.50e-15 71.6
MsG0680034150.01.T01 MTR_3g034020 38.776 98 58 1 65 160 71 168 1.57e-15 80.1
MsG0680034150.01.T01 MTR_0002s0870 41.573 89 50 1 76 162 61 149 5.18e-15 77.4
MsG0680034150.01.T01 MTR_1g057360 42.000 100 56 1 65 162 36 135 5.95e-15 77.4
MsG0680034150.01.T01 MTR_0003s0410 41.346 104 54 2 59 162 180 276 6.85e-15 79.0
MsG0680034150.01.T01 MTR_1g054110 40.659 91 52 1 74 162 72 162 8.78e-15 75.5
MsG0680034150.01.T01 MTR_1g012040 40.000 100 58 1 65 162 80 179 9.66e-15 78.2
MsG0680034150.01.T01 MTR_5g077050 50.725 69 34 0 69 137 114 182 1.89e-14 73.2
MsG0680034150.01.T01 MTR_7g062790 40.244 82 47 1 83 162 86 167 2.93e-14 73.6
MsG0680034150.01.T01 MTR_2g049690 44.048 84 41 2 83 162 92 173 4.88e-14 74.3
MsG0680034150.01.T01 MTR_1g033220 37.234 94 57 1 65 156 11 104 7.08e-14 72.8
MsG0680034150.01.T01 MTR_5g058370 44.706 85 46 1 162 245 146 230 1.00e-13 72.8
MsG0680034150.01.T01 MTR_1g045920 43.590 78 44 0 192 269 6 83 1.46e-13 72.0
MsG0680034150.01.T01 MTR_0356s0050 48.387 62 32 0 83 144 64 125 1.77e-13 70.5
MsG0680034150.01.T01 MTR_7g031700 42.857 84 43 2 59 140 140 220 1.60e-12 69.7
MsG0680034150.01.T01 MTR_8g446670 54.902 51 23 0 162 212 17 67 1.61e-12 65.1
MsG0680034150.01.T01 MTR_7g070715 42.500 80 46 0 65 144 103 182 2.01e-12 69.7
MsG0680034150.01.T01 MTR_6g082730 43.077 65 37 0 76 140 84 148 4.20e-12 65.1
MsG0680034150.01.T01 MTR_2g008505 41.250 80 47 0 65 144 103 182 4.81e-12 68.2
MsG0680034150.01.T01 MTR_5g040660 40.741 81 43 2 76 156 84 159 5.12e-12 65.5
MsG0680034150.01.T01 MTR_4g121520 40.260 77 42 2 167 241 82 156 1.03e-11 67.8
MsG0680034150.01.T01 MTR_5g020370 35.000 100 47 2 65 162 101 184 1.43e-11 67.0
MsG0680034150.01.T01 MTR_8g469370 39.024 82 48 1 83 162 158 239 2.02e-11 66.6
MsG0680034150.01.T01 MTR_8g042540 48.276 58 30 0 336 393 6 63 4.45e-11 60.1
MsG0680034150.01.T01 MTR_8g042540 31.169 77 53 0 573 649 6 82 5.11e-11 59.7
MsG0680034150.01.T01 MTR_8g074190 67.568 37 12 0 396 432 19 55 8.37e-11 58.5
MsG0680034150.01.T01 MTR_8g042540 31.169 77 53 0 573 649 18 94 8.51e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 158 sgRNAs with CRISPR-Local

Find 405 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAACATAAGTGTTAGAAAT+AGG 0.167528 6:+81947430 MsG0680034150.01.T01:CDS
ATGATATGGCTTCACTTAAA+TGG 0.196299 6:+81949514 MsG0680034150.01.T01:CDS
ATGATGTTCAAGCACGATTT+TGG 0.235138 6:+81947231 MsG0680034150.01.T01:CDS
ATCCTGTCTACGTCAGTTAA+TGG 0.247135 6:-81947044 None:intergenic
AATAAAGTGTGCATCATTTC+CGG 0.250201 6:-81947834 None:intergenic
TATACGAATCCACGGGTTAA+TGG 0.261873 6:-81950429 None:intergenic
TGGTGACATATTGCCCTATT+TGG 0.282188 6:-81947257 None:intergenic
TAGAAATCCTTGGTGTTTCT+TGG 0.282517 6:-81950725 None:intergenic
ATGTTCCTCCAATGTCTCTT+AGG 0.292580 6:+81950388 MsG0680034150.01.T01:CDS
AATTAACCAAGTTGATAGTT+TGG 0.294275 6:+81945619 MsG0680034150.01.T01:CDS
TTATTACGATCATGTCTATA+AGG 0.303799 6:-81950471 None:intergenic
CGTGATTCTACCTACACTTA+TGG 0.314559 6:+81950125 MsG0680034150.01.T01:CDS
TCACTGAACCACCATATTTC+AGG 0.323971 6:-81950287 None:intergenic
TGATCAGAGTCTTTATGATA+TGG 0.326181 6:+81949500 MsG0680034150.01.T01:CDS
TGAGATGAGCGCTGGAATTC+TGG 0.344781 6:+81947611 MsG0680034150.01.T01:CDS
CTGTGTGTTTCTCTCAAGGT+TGG 0.348094 6:+81950241 MsG0680034150.01.T01:CDS
ATTAACCAAGTTGATAGTTT+GGG 0.350971 6:+81945620 MsG0680034150.01.T01:CDS
AATTTAGGGTGATACGATTC+TGG 0.363554 6:+81944360 MsG0680034150.01.T01:intron
ATGACTCAAGTGTAGGTATT+GGG 0.372254 6:-81945551 None:intergenic
CAACATAAGTGTTAGAAATA+GGG 0.376369 6:+81947431 MsG0680034150.01.T01:CDS
AATGATGCACACTTTATTAT+CGG 0.390179 6:+81947839 MsG0680034150.01.T01:CDS
TAGCAGTAATGACGTGATTC+CGG 0.390263 6:-81945493 None:intergenic
TCACTGCTGGCACGTTCATC+AGG 0.393384 6:+81950861 MsG0680034150.01.T01:CDS
ACAACGTTGAATAGAGTGAT+AGG 0.395516 6:-81947522 None:intergenic
TGAAGCTGCTAATGGATATC+TGG 0.397959 6:+81950530 MsG0680034150.01.T01:CDS
GCATAACAGATTCTAAGAAT+TGG 0.402245 6:-81950703 None:intergenic
AAATCGTGCTTGAACATCAT+AGG 0.405477 6:-81947228 None:intergenic
GTCTTGACAGTTGCTATATC+CGG 0.412982 6:+81945474 MsG0680034150.01.T01:intron
TCAACATGCGATATAGATAA+AGG 0.413172 6:+81945573 MsG0680034150.01.T01:CDS
TCCAGGTCAAGGATCGTTAC+GGG 0.415931 6:+81950343 MsG0680034150.01.T01:CDS
TCTATAAGGGTTGATGGGTT+TGG 0.417202 6:-81950457 None:intergenic
TTGTAATGAGGTACCTTTGA+AGG 0.420135 6:-81950797 None:intergenic
AAACAACACATTCGAAGTAT+TGG 0.420250 6:+81947293 MsG0680034150.01.T01:CDS
TTGTTCGTATTCTTGATGTA+TGG 0.421421 6:+81944199 MsG0680034150.01.T01:CDS
GGCATGTATGACCTGAAATA+TGG 0.424594 6:+81950276 MsG0680034150.01.T01:CDS
TCTTGATTAGTTTCAGCAAA+TGG 0.428185 6:+81950496 MsG0680034150.01.T01:CDS
TAAGAATTGGTCATATGAAA+TGG 0.428345 6:-81950690 None:intergenic
GAATGTATTGTTTGATCTCT+AGG 0.429691 6:-81945516 None:intergenic
TATTACGATCATGTCTATAA+GGG 0.432015 6:-81950470 None:intergenic
ACAAATTGAAACTTGGTGCT+TGG 0.432526 6:+81947376 MsG0680034150.01.T01:CDS
GCCGTCTCGGTTTGTAATCC+AGG 0.433733 6:+81950326 MsG0680034150.01.T01:CDS
ATAAAGTGTGCATCATTTCC+GGG 0.440221 6:-81947833 None:intergenic
ACCTCAATTTCGTTATATGC+AGG 0.440504 6:-81950195 None:intergenic
CCCCGTAACGATCCTTGACC+TGG 0.440590 6:-81950344 None:intergenic
ACACTTATGGTGGATACAAT+TGG 0.443800 6:+81950138 MsG0680034150.01.T01:CDS
GATTCTGTGTGTTTCTCTCA+AGG 0.444697 6:+81950237 MsG0680034150.01.T01:CDS
TTATCGGTGGTGACTGGAGC+AGG 0.444909 6:+81947855 MsG0680034150.01.T01:CDS
ATCATGTCTATAAGGGTTGA+TGG 0.448490 6:-81950463 None:intergenic
GGTGGTAATCCTACCTCCTT+GGG 0.450626 6:-81949561 None:intergenic
ACTTTATTATCGGTGGTGAC+TGG 0.450693 6:+81947849 MsG0680034150.01.T01:CDS
TTCAGCTCATCATGCACAAA+TGG 0.452439 6:-81947552 None:intergenic
GGGTAATGAACATCTTGAAA+TGG 0.456141 6:+81944239 MsG0680034150.01.T01:CDS
CCATTGCAGCTGATGTTGAT+TGG 0.458185 6:+81949463 MsG0680034150.01.T01:intron
ACATCTTGAAATGGTTATGA+TGG 0.460858 6:+81944248 MsG0680034150.01.T01:CDS
TGGTTGATGAGCGTGGAAAT+AGG 0.463403 6:+81947786 MsG0680034150.01.T01:CDS
AAATAGGTGGACTTGCACTC+TGG 0.469177 6:+81947802 MsG0680034150.01.T01:CDS
AAACAAAACTTGTGAGCCAT+TGG 0.473349 6:-81945651 None:intergenic
CAAGGTTGGCTTGAACTCAA+TGG 0.474042 6:+81950255 MsG0680034150.01.T01:CDS
TCTACGTCAGTTAATGGATT+GGG 0.474132 6:-81947038 None:intergenic
GACTTCTACAAATTGAAACT+TGG 0.474920 6:+81947369 MsG0680034150.01.T01:CDS
CTGTGAACTTAGTAGATTTG+CGG 0.481465 6:+81950161 MsG0680034150.01.T01:CDS
TGGTTAATGTTCAGCCGTCT+CGG 0.484200 6:+81950313 MsG0680034150.01.T01:CDS
ATCCATTAACTGACGTAGAC+AGG 0.486156 6:+81947042 MsG0680034150.01.T01:CDS
AATGGTTATGATGGATTCAA+AGG 0.486827 6:+81944257 MsG0680034150.01.T01:CDS
CGTTGCATTTGTTCCTTCAA+AGG 0.488347 6:+81950784 MsG0680034150.01.T01:CDS
AGGTGGTAATCCTACCTCCT+TGG 0.489806 6:-81949562 None:intergenic
CACCATTGAGTTTAATCCCA+AGG 0.492077 6:+81949545 MsG0680034150.01.T01:CDS
TGATTGAGAATGACGTTGAC+TGG 0.499607 6:+81947102 MsG0680034150.01.T01:CDS
CAATGACTCTTAAGGAAACA+TGG 0.504014 6:+81944169 MsG0680034150.01.T01:CDS
ATCCAGGTCAAGGATCGTTA+CGG 0.508170 6:+81950342 MsG0680034150.01.T01:CDS
CTATCAACATAAAACTCCAT+TGG 0.508827 6:-81947489 None:intergenic
GATTAGTTTCAGCAAATGGT+TGG 0.509924 6:+81950500 MsG0680034150.01.T01:CDS
CTCCTTGGGATTAAACTCAA+TGG 0.511611 6:-81949547 None:intergenic
GATGTTGATGAAGCTGCTAA+TGG 0.512115 6:+81950522 MsG0680034150.01.T01:CDS
TGCAGCTGATGTTGATTGGT+TGG 0.512226 6:+81949467 MsG0680034150.01.T01:intron
GCGCACCCCATCCTCTAGTA+AGG 0.512473 6:-81947341 None:intergenic
GAGACATTGGAGGAACATGA+TGG 0.512666 6:-81950383 None:intergenic
TCAAGCCGTGGAGTCACTGC+TGG 0.514604 6:+81950848 MsG0680034150.01.T01:CDS
GTCTACGTCAGTTAATGGAT+TGG 0.515447 6:-81947039 None:intergenic
TTCATCCCAAACTATCAACT+TGG 0.517775 6:-81945625 None:intergenic
TATTTACCTTACTAGAGGAT+GGG 0.520797 6:+81947335 MsG0680034150.01.T01:CDS
GGTACCTCATTACAAGATTG+AGG 0.521091 6:+81950805 MsG0680034150.01.T01:CDS
AGACATTGGAGGAACATGAT+GGG 0.525904 6:-81950382 None:intergenic
ATATGGTGGTTCAGTGACTT+TGG 0.527484 6:+81950293 MsG0680034150.01.T01:CDS
GTATTTACCTTACTAGAGGA+TGG 0.527881 6:+81947334 MsG0680034150.01.T01:CDS
GCTGGCACGTTCATCAGGAT+TGG 0.531882 6:+81950866 MsG0680034150.01.T01:CDS
AAGCAGCAATACTCTGAACT+TGG 0.534033 6:+81947766 MsG0680034150.01.T01:CDS
GATGACTCAAGTGTAGGTAT+TGG 0.534153 6:-81945552 None:intergenic
TAGAAATAGGGTTGGCAAGA+GGG 0.535101 6:+81947443 MsG0680034150.01.T01:CDS
TCAACATAAAACTCCATTGG+AGG 0.536564 6:-81947486 None:intergenic
GTACCTCATTACAAGATTGA+GGG 0.547311 6:+81950806 MsG0680034150.01.T01:CDS
CATTCGAAGTATTGGTTGAG+AGG 0.547498 6:+81947301 MsG0680034150.01.T01:CDS
GTGGTGGTCACACATCTGAA+TGG 0.551131 6:+81944392 MsG0680034150.01.T01:CDS
AATCGTGCTTGAACATCATA+GGG 0.556485 6:-81947227 None:intergenic
TGGCATTGTATACGAATCCA+CGG 0.557906 6:-81950437 None:intergenic
TCATGTCTATAAGGGTTGAT+GGG 0.560091 6:-81950462 None:intergenic
ATATAACGAAATTGAGGTGC+TGG 0.561797 6:+81950200 MsG0680034150.01.T01:CDS
TCCATTGGAGGATCAAACTT+AGG 0.562024 6:-81947474 None:intergenic
CCCTGCATATAACGAAATTG+AGG 0.564357 6:+81950194 MsG0680034150.01.T01:CDS
AAGGCTAGACGTCTTAAAGC+TGG 0.567314 6:+81947884 MsG0680034150.01.T01:CDS
ATCTGTCAGATAGAAATCCT+TGG 0.568357 6:-81950735 None:intergenic
TGGTCACACATCTGAATGGA+AGG 0.568427 6:+81944396 MsG0680034150.01.T01:CDS
TCATCATGCACAAATGGAGC+AGG 0.568971 6:-81947546 None:intergenic
TCCTAAGTTTGATCCTCCAA+TGG 0.569093 6:+81947473 MsG0680034150.01.T01:CDS
ATTTACCTTACTAGAGGATG+GGG 0.569156 6:+81947336 MsG0680034150.01.T01:CDS
GATGCTGATGAGATGAGCGC+TGG 0.570512 6:+81947603 MsG0680034150.01.T01:CDS
AAGAATTTCTGTTCAAGCCG+TGG 0.571357 6:+81950836 MsG0680034150.01.T01:CDS
GAATGGAAGGGAAAGATCAA+AGG 0.574476 6:+81944409 MsG0680034150.01.T01:CDS
TTGTAGGTGCTTGCTTACGT+TGG 0.577131 6:+81947719 MsG0680034150.01.T01:intron
GGTACAGTTCCACACGTGGC+CGG 0.577516 6:-81950762 None:intergenic
CAGATGACACCGGCCACGTG+TGG 0.578266 6:+81950753 MsG0680034150.01.T01:CDS
TGATTCAACCTAAGAGACAT+TGG 0.578394 6:-81950396 None:intergenic
ATTGTATCCACCATAAGTGT+AGG 0.578963 6:-81950135 None:intergenic
CCTCAATTTCGTTATATGCA+GGG 0.579369 6:-81950194 None:intergenic
AGTTAATGGATTGGGATCCA+AGG 0.580896 6:-81947030 None:intergenic
CATGTTGATGACTCAAGTGT+AGG 0.584506 6:-81945558 None:intergenic
ATGGAGTGTTGTCAATAGCA+AGG 0.589997 6:+81944218 MsG0680034150.01.T01:CDS
ACAGGATGATCAATGAATTG+AGG 0.592102 6:+81947060 MsG0680034150.01.T01:CDS
AGTTTGGGATGAAGCTCCAA+TGG 0.596873 6:+81945635 MsG0680034150.01.T01:CDS
ACACTCAAAGACATAATGAC+CGG 0.597463 6:+81945690 MsG0680034150.01.T01:CDS
GATTCTACCTACACTTATGG+TGG 0.599170 6:+81950128 MsG0680034150.01.T01:CDS
ATAAGTGTTAGAAATAGGGT+TGG 0.601711 6:+81947435 MsG0680034150.01.T01:CDS
TCGGTTTGTAATCCAGGTCA+AGG 0.601990 6:+81950332 MsG0680034150.01.T01:CDS
GGCATTGTATACGAATCCAC+GGG 0.603886 6:-81950436 None:intergenic
CTGAACTTGGTTGATGAGCG+TGG 0.604727 6:+81947779 MsG0680034150.01.T01:CDS
TTAGAAATAGGGTTGGCAAG+AGG 0.606967 6:+81947442 MsG0680034150.01.T01:CDS
TGGAGTGTTGTCAATAGCAA+GGG 0.607318 6:+81944219 MsG0680034150.01.T01:CDS
GTTAATGGATTGGGATCCAA+GGG 0.611832 6:-81947029 None:intergenic
ATAGGTATTTACCTTACTAG+AGG 0.615316 6:+81947330 MsG0680034150.01.T01:CDS
GACATTGGAGGAACATGATG+GGG 0.616477 6:-81950381 None:intergenic
ACGTGCCAGCAGTGACTCCA+CGG 0.621975 6:-81950853 None:intergenic
ACCTGGATTACAAACCGAGA+CGG 0.631652 6:-81950327 None:intergenic
ACGATTCTGGCTCTGATCCG+TGG 0.635981 6:+81944373 MsG0680034150.01.T01:CDS
TACCTCATTACAAGATTGAG+GGG 0.638783 6:+81950807 MsG0680034150.01.T01:CDS
CAACGTTGAATAGAGTGATA+GGG 0.640002 6:-81947521 None:intergenic
GATGCACACTTTATTATCGG+TGG 0.641711 6:+81947842 MsG0680034150.01.T01:CDS
GATTGAGAATGACGTTGACT+GGG 0.648095 6:+81947103 MsG0680034150.01.T01:CDS
ACCTCATTACAAGATTGAGG+GGG 0.650436 6:+81950808 MsG0680034150.01.T01:CDS
TTGGTTGAGAGGAACAACAT+AGG 0.651304 6:+81947312 MsG0680034150.01.T01:CDS
GATCTCTTTCCATTAACCCG+TGG 0.654151 6:+81950420 MsG0680034150.01.T01:CDS
CAACGGTACAGTTCCACACG+TGG 0.655710 6:-81950766 None:intergenic
ATGACGTGTATCATCAACAA+TGG 0.659985 6:+81944436 MsG0680034150.01.T01:CDS
GGTCACACATCTGAATGGAA+GGG 0.660205 6:+81944397 MsG0680034150.01.T01:CDS
CGGTGGTGACTGGAGCAGGA+TGG 0.667881 6:+81947859 MsG0680034150.01.T01:CDS
CCAGGTCAAGGATCGTTACG+GGG 0.673732 6:+81950344 MsG0680034150.01.T01:CDS
CTTTGAAGGAACAAATGCAA+CGG 0.682484 6:-81950783 None:intergenic
TTCAACCTAAGAGACATTGG+AGG 0.683562 6:-81950393 None:intergenic
TGTTATGCCAAGAAACACCA+AGG 0.686299 6:+81950718 MsG0680034150.01.T01:CDS
AATAGGGCAATATGTCACCA+TGG 0.688371 6:+81947260 MsG0680034150.01.T01:CDS
CCTCATTACAAGATTGAGGG+GGG 0.688948 6:+81950809 MsG0680034150.01.T01:CDS
TGACTGGAGCAGGATGGTGA+AGG 0.690076 6:+81947865 MsG0680034150.01.T01:CDS
ATTCTGGCTCTGATCCGTGG+TGG 0.693076 6:+81944376 MsG0680034150.01.T01:CDS
GAGGATCAAACTTAGGAACA+CGG 0.694190 6:-81947467 None:intergenic
TTCTATCTGACAGATGACAC+CGG 0.695828 6:+81950743 MsG0680034150.01.T01:CDS
CATTGAGTTTAATCCCAAGG+AGG 0.700647 6:+81949548 MsG0680034150.01.T01:CDS
ATTCAGATGTGTGACCACCA+CGG 0.715063 6:-81944390 None:intergenic
ATGTATGACCTGAAATATGG+TGG 0.723006 6:+81950279 MsG0680034150.01.T01:CDS
TTGATGAGCGTGGAAATAGG+TGG 0.733565 6:+81947789 MsG0680034150.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATATAATTTATTATTTA+CGG - Chr6:81948447-81948466 None:intergenic 0.0%
!!! ATAATTTTCATTTAAAAACT+TGG - Chr6:81944745-81944764 None:intergenic 10.0%
!!! ATCAATATCAATTTTTTTTA+AGG + Chr6:81944986-81945005 MsG0680034150.01.T01:intron 10.0%
!! ATACTAATATACATATGAAT+TGG - Chr6:81946151-81946170 None:intergenic 15.0%
!! TTAAACAAATATACTAATGA+AGG + Chr6:81950028-81950047 MsG0680034150.01.T01:intron 15.0%
!! TTAGTATTTGTACAATTAAT+TGG + Chr6:81946164-81946183 MsG0680034150.01.T01:intron 15.0%
!!! ATAAGAATTTTTAGTAGAAA+AGG + Chr6:81949707-81949726 MsG0680034150.01.T01:intron 15.0%
!!! CAACTATTTTTTTCAATTTA+GGG + Chr6:81944346-81944365 MsG0680034150.01.T01:intron 15.0%
!!! CACTTTTTATTAAAAAATGT+AGG - Chr6:81946458-81946477 None:intergenic 15.0%
!!! TCAACTATTTTTTTCAATTT+AGG + Chr6:81944345-81944364 MsG0680034150.01.T01:intron 15.0%
!! AAAATATTGCCTTAAACAAA+AGG - Chr6:81949585-81949604 None:intergenic 20.0%
!! AAGTCTTCATCAAAAATATT+TGG + Chr6:81945717-81945736 MsG0680034150.01.T01:CDS 20.0%
!! ACATTAGATTATAAAAACTG+TGG - Chr6:81949038-81949057 None:intergenic 20.0%
!! AGTAGAAACTAAAATAAAAC+AGG - Chr6:81944803-81944822 None:intergenic 20.0%
!! ATTAATGAGCATTAATTTCA+CGG + Chr6:81949008-81949027 MsG0680034150.01.T01:intron 20.0%
!! ATTTCCAAGTATGTATTAAT+TGG + Chr6:81946237-81946256 MsG0680034150.01.T01:intron 20.0%
!! TAAAAAAATATGTCATGGAA+CGG - Chr6:81946102-81946121 None:intergenic 20.0%
!! TAACGAAAATTCAAATTTAC+AGG + Chr6:81948396-81948415 MsG0680034150.01.T01:intron 20.0%
!! TCAAAAAAATTTGTGTTTCT+TGG + Chr6:81944502-81944521 MsG0680034150.01.T01:intron 20.0%
!! TTCGTATTTATACAATCATA+TGG - Chr6:81946799-81946818 None:intergenic 20.0%
!!! AATTTTGTACTTCATTTTAC+TGG + Chr6:81948132-81948151 MsG0680034150.01.T01:intron 20.0%
!!! CATTTTTTAATAAAAAGTGC+AGG + Chr6:81946459-81946478 MsG0680034150.01.T01:intron 20.0%
!!! TAATGACTTGAATAAGTTTT+CGG - Chr6:81948375-81948394 None:intergenic 20.0%
!!! TATTATTATTAGTCTTAGCT+AGG + Chr6:81945345-81945364 MsG0680034150.01.T01:intron 20.0%
!!! TTGTTTGCTTTTTTATTATG+TGG + Chr6:81948019-81948038 MsG0680034150.01.T01:intron 20.0%
!!! TTTATTGACTATAAGCTTTA+GGG - Chr6:81945907-81945926 None:intergenic 20.0%
! AAAAAATTTGTGTTTCTTGG+TGG + Chr6:81944505-81944524 MsG0680034150.01.T01:intron 25.0%
! AAAGAAAATCTTCATCAGTT+AGG + Chr6:81945961-81945980 MsG0680034150.01.T01:intron 25.0%
! AAAGATCAATTAACAGTCAT+TGG - Chr6:81949070-81949089 None:intergenic 25.0%
! AACATTAATCAATGATGCAA+TGG - Chr6:81945387-81945406 None:intergenic 25.0%
! AAGATCAATTAACAGTCATT+GGG - Chr6:81949069-81949088 None:intergenic 25.0%
! AATCAATTCATGACAAATGA+TGG - Chr6:81945133-81945152 None:intergenic 25.0%
! AATGATGCACACTTTATTAT+CGG + Chr6:81947839-81947858 MsG0680034150.01.T01:CDS 25.0%
! ATACATACTTGGAAATATAC+AGG - Chr6:81946233-81946252 None:intergenic 25.0%
! ATACATTCATATATGAGTCT+TGG - Chr6:81944722-81944741 None:intergenic 25.0%
! ATCAATTCATGACAAATGAT+GGG - Chr6:81945132-81945151 None:intergenic 25.0%
! ATTATCAATGTCAATCTGTT+AGG + Chr6:81949110-81949129 MsG0680034150.01.T01:intron 25.0%
! ATTGGAAACATTTATTACCA+AGG - Chr6:81946744-81946763 None:intergenic 25.0%
! ATTTGTAGTGAATGTGTAAA+TGG + Chr6:81949667-81949686 MsG0680034150.01.T01:intron 25.0%
! CAACATAAGTGTTAGAAATA+GGG + Chr6:81947431-81947450 MsG0680034150.01.T01:CDS 25.0%
! CAACTATTAACAGTTTCAAA+TGG + Chr6:81945412-81945431 MsG0680034150.01.T01:intron 25.0%
! CAATGACAAATAAAATCTGT+AGG - Chr6:81948329-81948348 None:intergenic 25.0%
! CATATTTCATAATGATCCAA+CGG + Chr6:81948860-81948879 MsG0680034150.01.T01:intron 25.0%
! CTAAAGCTTATAGTCAATAA+AGG + Chr6:81945906-81945925 MsG0680034150.01.T01:intron 25.0%
! CTTCATCAAAAATATTTGGA+GGG + Chr6:81945721-81945740 MsG0680034150.01.T01:CDS 25.0%
! GAATCACTACAACATAATTT+GGG + Chr6:81948565-81948584 MsG0680034150.01.T01:intron 25.0%
! GCAGATAAAAAAATATGTCA+TGG - Chr6:81946107-81946126 None:intergenic 25.0%
! GTTATACGATATGAAACTAA+GGG - Chr6:81949861-81949880 None:intergenic 25.0%
! TAAGAATTGGTCATATGAAA+TGG - Chr6:81950693-81950712 None:intergenic 25.0%
! TATCATTTGTGTCATAAAGT+AGG + Chr6:81948632-81948651 MsG0680034150.01.T01:intron 25.0%
! TATTAACAGTTTCAAATGGT+TGG + Chr6:81945416-81945435 MsG0680034150.01.T01:intron 25.0%
! TATTACGATCATGTCTATAA+GGG - Chr6:81950473-81950492 None:intergenic 25.0%
! TCAAAAATGCCATTAAATGT+TGG - Chr6:81946613-81946632 None:intergenic 25.0%
! TCAACATAAGTGTTAGAAAT+AGG + Chr6:81947430-81947449 MsG0680034150.01.T01:CDS 25.0%
! TCATTAATCAGTGAATGATT+AGG - Chr6:81948996-81949015 None:intergenic 25.0%
! TCTTCATCAAAAATATTTGG+AGG + Chr6:81945720-81945739 MsG0680034150.01.T01:CDS 25.0%
! TGAATCACTACAACATAATT+TGG + Chr6:81948564-81948583 MsG0680034150.01.T01:intron 25.0%
! TGTAATCGTTAAACTTAGTA+TGG - Chr6:81949819-81949838 None:intergenic 25.0%
! TGTTATACGATATGAAACTA+AGG - Chr6:81949862-81949881 None:intergenic 25.0%
! TTATTACGATCATGTCTATA+AGG - Chr6:81950474-81950493 None:intergenic 25.0%
! TTCTAGATTTACAAAATAGC+AGG - Chr6:81949923-81949942 None:intergenic 25.0%
! TTGTAGCTATTGTTAAGAAT+TGG - Chr6:81948474-81948493 None:intergenic 25.0%
! TTGTTTGGTTGTAGTAATTT+AGG - Chr6:81945254-81945273 None:intergenic 25.0%
! TTTGTAGTGAATGTGTAAAT+GGG + Chr6:81949668-81949687 MsG0680034150.01.T01:intron 25.0%
!! ATATGATTAACTGCACTTTT+TGG + Chr6:81945208-81945227 MsG0680034150.01.T01:intron 25.0%
!! CTTTATTGACTATAAGCTTT+AGG - Chr6:81945908-81945927 None:intergenic 25.0%
!! GCATCATTGATTAATGTTTA+TGG + Chr6:81945389-81945408 MsG0680034150.01.T01:intron 25.0%
!! TATACATATGAATTGGTCTA+AGG - Chr6:81946144-81946163 None:intergenic 25.0%
!! TTAATATATGCCTTATTCTC+TGG - Chr6:81948820-81948839 None:intergenic 25.0%
!! TTGTAGTTTAGGATTATACT+AGG - Chr6:81946533-81946552 None:intergenic 25.0%
!!! AATTAACCAAGTTGATAGTT+TGG + Chr6:81945619-81945638 MsG0680034150.01.T01:CDS 25.0%
!!! ACAAAAGCGATACTTTTTTA+AGG + Chr6:81944564-81944583 MsG0680034150.01.T01:intron 25.0%
!!! ACAAGTTTTGTTTTGAAACA+TGG + Chr6:81945661-81945680 MsG0680034150.01.T01:CDS 25.0%
!!! ATTAACCAAGTTGATAGTTT+GGG + Chr6:81945620-81945639 MsG0680034150.01.T01:CDS 25.0%
!!! CAAGTTTTGTTTTGAAACAT+GGG + Chr6:81945662-81945681 MsG0680034150.01.T01:CDS 25.0%
!!! CGTATGTATGTTAATTTGTT+TGG - Chr6:81946394-81946413 None:intergenic 25.0%
!!! TATATTTTGAGTGAGTAACT+AGG - Chr6:81945941-81945960 None:intergenic 25.0%
!!! TATGATTAACTGCACTTTTT+GGG + Chr6:81945209-81945228 MsG0680034150.01.T01:intron 25.0%
!!! TTAAAAAAGTATCGCTTTTG+TGG - Chr6:81944565-81944584 None:intergenic 25.0%
!!! TTCATGTCCATTTTATTTGT+AGG + Chr6:81947703-81947722 MsG0680034150.01.T01:intron 25.0%
AAAATTATGAGTGTCCTCAT+TGG + Chr6:81948893-81948912 MsG0680034150.01.T01:intron 30.0%
AAAATTATGAGTGTCCTCAT+TGG - Chr6:81948912-81948893 None:intergenic 30.0%
AAACAACACATTCGAAGTAT+TGG + Chr6:81947293-81947312 MsG0680034150.01.T01:CDS 30.0%
AACATGATAAGCATCTGATT+GGG - Chr6:81947177-81947196 None:intergenic 30.0%
AACATGCTACAAAGACAAAT+AGG - Chr6:81949211-81949230 None:intergenic 30.0%
AATAAAGTGTGCATCATTTC+CGG - Chr6:81947837-81947856 None:intergenic 30.0%
AATACATGCCTATTAACATC+TGG - Chr6:81946902-81946921 None:intergenic 30.0%
AATCTGATTGCTCTTTATCA+TGG + Chr6:81949397-81949416 MsG0680034150.01.T01:intron 30.0%
ACATCTTGAAATGGTTATGA+TGG + Chr6:81944248-81944267 MsG0680034150.01.T01:CDS 30.0%
AGCTTAACGGTATTTATCAA+TGG + Chr6:81949976-81949995 MsG0680034150.01.T01:intron 30.0%
AGTATGGTTATACTATGTGA+TGG - Chr6:81949803-81949822 None:intergenic 30.0%
ATAAGTGTTAGAAATAGGGT+TGG + Chr6:81947435-81947454 MsG0680034150.01.T01:CDS 30.0%
ATAGGTATTTACCTTACTAG+AGG + Chr6:81947330-81947349 MsG0680034150.01.T01:CDS 30.0%
ATATTGCCTTAAACAAAAGG+TGG - Chr6:81949582-81949601 None:intergenic 30.0%
ATATTTGTTTAAGCACTCAC+CGG - Chr6:81950020-81950039 None:intergenic 30.0%
ATCCTTCACAATCTAACTTT+CGG + Chr6:81946302-81946321 MsG0680034150.01.T01:intron 30.0%
ATGAAACAACATATATGCAG+TGG - Chr6:81948762-81948781 None:intergenic 30.0%
ATGATATGGCTTCACTTAAA+TGG + Chr6:81949514-81949533 MsG0680034150.01.T01:CDS 30.0%
ATTACAATTGATGGAAAAGC+AGG - Chr6:81946829-81946848 None:intergenic 30.0%
CAAAACGATGTCAAATGAAA+AGG - Chr6:81946926-81946945 None:intergenic 30.0%
CAACAAAAAGACAAAGACAA+AGG - Chr6:81947004-81947023 None:intergenic 30.0%
CTATATGACAAAGAGCTTAA+CGG + Chr6:81949963-81949982 MsG0680034150.01.T01:intron 30.0%
CTATCAACATAAAACTCCAT+TGG - Chr6:81947492-81947511 None:intergenic 30.0%
GAAAATGGTAACTGTTACAT+TGG - Chr6:81946770-81946789 None:intergenic 30.0%
GAATGTATTGTTTGATCTCT+AGG - Chr6:81945519-81945538 None:intergenic 30.0%
GACTTCTACAAATTGAAACT+TGG + Chr6:81947369-81947388 MsG0680034150.01.T01:CDS 30.0%
GATCATTATGAAATATGCTG+AGG - Chr6:81948857-81948876 None:intergenic 30.0%
TAACTGTTACATTGGAACAT+TGG - Chr6:81946762-81946781 None:intergenic 30.0%
TAACTTTCGGACTTAACTTT+CGG + Chr6:81946315-81946334 MsG0680034150.01.T01:intron 30.0%
TATTTACCTTACTAGAGGAT+GGG + Chr6:81947335-81947354 MsG0680034150.01.T01:CDS 30.0%
TCAACATGCGATATAGATAA+AGG + Chr6:81945573-81945592 MsG0680034150.01.T01:CDS 30.0%
TCCATTACCAACAAAAACAA+TGG - Chr6:81947406-81947425 None:intergenic 30.0%
TCGTATAACAATCACATAGT+AGG + Chr6:81949872-81949891 MsG0680034150.01.T01:intron 30.0%
TCTATCCATATAGCAGAAAA+AGG + Chr6:81949295-81949314 MsG0680034150.01.T01:intron 30.0%
TGAAACAACATATATGCAGT+GGG - Chr6:81948761-81948780 None:intergenic 30.0%
TGATCAGAGTCTTTATGATA+TGG + Chr6:81949500-81949519 MsG0680034150.01.T01:CDS 30.0%
TGTAGGTGCGATATATTATA+TGG - Chr6:81946441-81946460 None:intergenic 30.0%
TTATACAATCATATGGTGCA+TGG - Chr6:81946792-81946811 None:intergenic 30.0%
TTCAGCACACATATGAAAAA+AGG + Chr6:81947577-81947596 MsG0680034150.01.T01:CDS 30.0%
TTGCTTTGACAAGTAATTTG+TGG + Chr6:81945820-81945839 MsG0680034150.01.T01:intron 30.0%
TTGTAGTGAATGTGTAAATG+GGG + Chr6:81949669-81949688 MsG0680034150.01.T01:intron 30.0%
TTGTTCGTATTCTTGATGTA+TGG + Chr6:81944199-81944218 MsG0680034150.01.T01:CDS 30.0%
TTTCAAAACTGTCTACATAG+TGG + Chr6:81945183-81945202 MsG0680034150.01.T01:intron 30.0%
! ATTTTGCTGAGATCCTTAAA+GGG + Chr6:81944587-81944606 MsG0680034150.01.T01:intron 30.0%
! CTGTCTAAAAGCAATTTTCA+TGG + Chr6:81949630-81949649 MsG0680034150.01.T01:intron 30.0%
! GCATAACAGATTCTAAGAAT+TGG - Chr6:81950706-81950725 None:intergenic 30.0%
! GGAGGGAATGTAATTATTTT+CGG + Chr6:81945738-81945757 MsG0680034150.01.T01:CDS 30.0%
! TGCTTTGACAAGTAATTTGT+GGG + Chr6:81945821-81945840 MsG0680034150.01.T01:intron 30.0%
! TTTTCTGCTATATGGATAGA+AGG - Chr6:81949295-81949314 None:intergenic 30.0%
! TTTTGATGAAGACTTAGATC+CGG - Chr6:81945712-81945731 None:intergenic 30.0%
! TTTTGTGTGCATTGTAGTTT+AGG - Chr6:81946544-81946563 None:intergenic 30.0%
!! AATGGTTATGATGGATTCAA+AGG + Chr6:81944257-81944276 MsG0680034150.01.T01:CDS 30.0%
!! CAATGGAGTTTTATGTTGAT+AGG + Chr6:81947490-81947509 MsG0680034150.01.T01:CDS 30.0%
!! GCAAGTTGATATATGCTTTA+TGG + Chr6:81945104-81945123 MsG0680034150.01.T01:intron 30.0%
!! TCTTGATTAGTTTCAGCAAA+TGG + Chr6:81950496-81950515 MsG0680034150.01.T01:CDS 30.0%
!! TGAAACCATTTCTGGTTAAA+GGG - Chr6:81948661-81948680 None:intergenic 30.0%
!!! AATTTTTTAAGATCCACCGT+TGG + Chr6:81948720-81948739 MsG0680034150.01.T01:intron 30.0%
!!! AATTTTTTAAGATCCACCGT+TGG - Chr6:81948739-81948720 None:intergenic 30.0%
!!! ACCATTGTTTTTGTTGGTAA+TGG + Chr6:81947402-81947421 MsG0680034150.01.T01:CDS 30.0%
!!! ACTTCGAATGTGTTGTTTTT+AGG - Chr6:81947291-81947310 None:intergenic 30.0%
!!! TAGTAGGCTGTTTTATTTCA+AGG + Chr6:81949888-81949907 MsG0680034150.01.T01:intron 30.0%
!!! TTGTTTTTGTTGGTAATGGA+AGG + Chr6:81947406-81947425 MsG0680034150.01.T01:CDS 30.0%
AAACAAAACTTGTGAGCCAT+TGG - Chr6:81945654-81945673 None:intergenic 35.0%
AAATCGTGCTTGAACATCAT+AGG - Chr6:81947231-81947250 None:intergenic 35.0%
AAGCAATACACTTGTCAGAA+CGG - Chr6:81945806-81945825 None:intergenic 35.0%
AATATGAAGAGTCTCTACCT+TGG + Chr6:81946724-81946743 MsG0680034150.01.T01:intron 35.0%
AATCGTGCTTGAACATCATA+GGG - Chr6:81947230-81947249 None:intergenic 35.0%
ACAACGTTGAATAGAGTGAT+AGG - Chr6:81947525-81947544 None:intergenic 35.0%
ACACTCAAAGACATAATGAC+CGG + Chr6:81945690-81945709 MsG0680034150.01.T01:CDS 35.0%
ACAGGATGATCAATGAATTG+AGG + Chr6:81947060-81947079 MsG0680034150.01.T01:CDS 35.0%
ACAGTTTCAAATGGTTGGAA+TGG + Chr6:81945421-81945440 MsG0680034150.01.T01:intron 35.0%
ACCTCAATTTCGTTATATGC+AGG - Chr6:81950198-81950217 None:intergenic 35.0%
ACGTTTATGGACGTTTAATG+GGG - Chr6:81946686-81946705 None:intergenic 35.0%
ATAAAGTGTGCATCATTTCC+GGG - Chr6:81947836-81947855 None:intergenic 35.0%
ATAGTCAATAAAGGTCCACT+TGG + Chr6:81945915-81945934 MsG0680034150.01.T01:intron 35.0%
ATATAACGAAATTGAGGTGC+TGG + Chr6:81950200-81950219 MsG0680034150.01.T01:CDS 35.0%
ATCATATGGTGCATGGAAAA+TGG - Chr6:81946785-81946804 None:intergenic 35.0%
ATCATGTCTATAAGGGTTGA+TGG - Chr6:81950466-81950485 None:intergenic 35.0%
ATCTGTCAGATAGAAATCCT+TGG - Chr6:81950738-81950757 None:intergenic 35.0%
ATGACGTGTATCATCAACAA+TGG + Chr6:81944436-81944455 MsG0680034150.01.T01:CDS 35.0%
ATGACTCAAGTGTAGGTATT+GGG - Chr6:81945554-81945573 None:intergenic 35.0%
ATGCAGTCACAATTCTGATT+AGG - Chr6:81948946-81948965 None:intergenic 35.0%
ATGTATGACCTGAAATATGG+TGG + Chr6:81950279-81950298 MsG0680034150.01.T01:CDS 35.0%
ATTGGTCATATGAAATGGTC+TGG - Chr6:81950688-81950707 None:intergenic 35.0%
ATTGTATCCACCATAAGTGT+AGG - Chr6:81950138-81950157 None:intergenic 35.0%
ATTTACCTTACTAGAGGATG+GGG + Chr6:81947336-81947355 MsG0680034150.01.T01:CDS 35.0%
ATTTCATAATGATCCAACGG+TGG + Chr6:81948863-81948882 MsG0680034150.01.T01:intron 35.0%
CAACATGATAAGCATCTGAT+TGG - Chr6:81947178-81947197 None:intergenic 35.0%
CAACGTTGAATAGAGTGATA+GGG - Chr6:81947524-81947543 None:intergenic 35.0%
CAATCAGATGCTTATCATGT+TGG + Chr6:81947176-81947195 MsG0680034150.01.T01:intron 35.0%
CAATGACTCTTAAGGAAACA+TGG + Chr6:81944169-81944188 MsG0680034150.01.T01:CDS 35.0%
CACGTTTATGGACGTTTAAT+GGG - Chr6:81946687-81946706 None:intergenic 35.0%
CCTCAATTTCGTTATATGCA+GGG - Chr6:81950197-81950216 None:intergenic 35.0%
CTACAACCAAACAAAATCTC+TGG + Chr6:81945260-81945279 MsG0680034150.01.T01:intron 35.0%
CTGACATACCAGATGTTAAT+AGG + Chr6:81946891-81946910 MsG0680034150.01.T01:intron 35.0%
CTGTGAACTTAGTAGATTTG+CGG + Chr6:81950161-81950180 MsG0680034150.01.T01:CDS 35.0%
GAACAAAGAGCAATATCCAA+CGG - Chr6:81948739-81948758 None:intergenic 35.0%
GAATAGGTTACCAGAGAATA+AGG + Chr6:81948807-81948826 MsG0680034150.01.T01:intron 35.0%
GCAAGCACCTACAAATAAAA+TGG - Chr6:81947713-81947732 None:intergenic 35.0%
GCTGCCAATTAATACATACT+TGG - Chr6:81946244-81946263 None:intergenic 35.0%
GGGTAATGAACATCTTGAAA+TGG + Chr6:81944239-81944258 MsG0680034150.01.T01:CDS 35.0%
GTACCTCATTACAAGATTGA+GGG + Chr6:81950806-81950825 MsG0680034150.01.T01:CDS 35.0%
GTATTTACCTTACTAGAGGA+TGG + Chr6:81947334-81947353 MsG0680034150.01.T01:CDS 35.0%
TACCTCATTACAAGATTGAG+GGG + Chr6:81950807-81950826 MsG0680034150.01.T01:CDS 35.0%
TACTGTAGTGAAACCATTTC+TGG - Chr6:81948669-81948688 None:intergenic 35.0%
TAGTTGAAACGATACCAATG+AGG + Chr6:81948689-81948708 MsG0680034150.01.T01:intron 35.0%
TAGTTGAAACGATACCAATG+AGG - Chr6:81948708-81948689 None:intergenic 35.0%
TATAGCAGAAAAAGGTTCGA+TGG + Chr6:81949303-81949322 MsG0680034150.01.T01:intron 35.0%
TCAACATAAAACTCCATTGG+AGG - Chr6:81947489-81947508 None:intergenic 35.0%
TGATTCAACCTAAGAGACAT+TGG - Chr6:81950399-81950418 None:intergenic 35.0%
TGTGCTTTGCCAACATTTAA+TGG + Chr6:81946601-81946620 MsG0680034150.01.T01:intron 35.0%
TTACTAAACAGCAAAGCAAC+AGG - Chr6:81947673-81947692 None:intergenic 35.0%
TTATGGTATTTATGCGACTG+TGG + Chr6:81950613-81950632 MsG0680034150.01.T01:intron 35.0%
TTCATCCCAAACTATCAACT+TGG - Chr6:81945628-81945647 None:intergenic 35.0%
TTGACAGAGTCTTACAACAA+TGG - Chr6:81944940-81944959 None:intergenic 35.0%
! AATTTAGGGTGATACGATTC+TGG + Chr6:81944360-81944379 MsG0680034150.01.T01:intron 35.0%
! ATAGCACCAGAGATTTTGTT+TGG - Chr6:81945269-81945288 None:intergenic 35.0%
! ATGATGTTCAAGCACGATTT+TGG + Chr6:81947231-81947250 MsG0680034150.01.T01:CDS 35.0%
! CTTTGAAGGAACAAATGCAA+CGG - Chr6:81950786-81950805 None:intergenic 35.0%
! GAAATGTTCGCTCCAATTTT+TGG - Chr6:81950896-81950915 None:intergenic 35.0%
! GATTTTGCTGAGATCCTTAA+AGG + Chr6:81944586-81944605 MsG0680034150.01.T01:intron 35.0%
! GGGAATGTAATTATTTTCGG+TGG + Chr6:81945741-81945760 MsG0680034150.01.T01:CDS 35.0%
! TCATGTCTATAAGGGTTGAT+GGG - Chr6:81950465-81950484 None:intergenic 35.0%
! TCGAACCTTTTTCTGCTATA+TGG - Chr6:81949303-81949322 None:intergenic 35.0%
! TCTGGTATGTCAGAAAGTTT+TGG - Chr6:81946884-81946903 None:intergenic 35.0%
! TGCTTTTAGACAGAGAAATG+AGG - Chr6:81949623-81949642 None:intergenic 35.0%
! TGGATTTTCTCAGATGTGTT+TGG + Chr6:81947739-81947758 MsG0680034150.01.T01:CDS 35.0%
! TTGTAATGAGGTACCTTTGA+AGG - Chr6:81950800-81950819 None:intergenic 35.0%
!! ACAAATTGAAACTTGGTGCT+TGG + Chr6:81947376-81947395 MsG0680034150.01.T01:CDS 35.0%
!! ACACTTATGGTGGATACAAT+TGG + Chr6:81950138-81950157 MsG0680034150.01.T01:CDS 35.0%
!! ACGATTTTGGTGACCAAATA+GGG + Chr6:81947244-81947263 MsG0680034150.01.T01:CDS 35.0%
!! ATGATTGTTGTTTGAGACAG+TGG + Chr6:81949735-81949754 MsG0680034150.01.T01:intron 35.0%
!! GATTAGTTTCAGCAAATGGT+TGG + Chr6:81950500-81950519 MsG0680034150.01.T01:CDS 35.0%
!! GGATTACCACCTTTTGTTTA+AGG + Chr6:81949573-81949592 MsG0680034150.01.T01:intron 35.0%
!! GTGAAACCATTTCTGGTTAA+AGG - Chr6:81948662-81948681 None:intergenic 35.0%
!! TAGAAATCCTTGGTGTTTCT+TGG - Chr6:81950728-81950747 None:intergenic 35.0%
!! TCTACGTCAGTTAATGGATT+GGG - Chr6:81947041-81947060 None:intergenic 35.0%
!!! GTTGTTTTTAGGATCAACCA+TGG - Chr6:81947280-81947299 None:intergenic 35.0%
!!! TGGATCACCATTGTTTTTGT+TGG + Chr6:81947396-81947415 MsG0680034150.01.T01:CDS 35.0%
AAATAGTTTGACCGATACGC+TGG + Chr6:81946201-81946220 MsG0680034150.01.T01:intron 40.0%
AAATCACCTGCTTGTCTAAG+TGG - Chr6:81946022-81946041 None:intergenic 40.0%
AAGAATTTCTGTTCAAGCCG+TGG + Chr6:81950836-81950855 MsG0680034150.01.T01:CDS 40.0%
AAGCAGCAATACTCTGAACT+TGG + Chr6:81947766-81947785 MsG0680034150.01.T01:CDS 40.0%
AAGGGAACTGCAAGTTAGAA+AGG + Chr6:81944605-81944624 MsG0680034150.01.T01:intron 40.0%
AATAGGGCAATATGTCACCA+TGG + Chr6:81947260-81947279 MsG0680034150.01.T01:CDS 40.0%
AATCACCTGCTTGTCTAAGT+GGG - Chr6:81946021-81946040 None:intergenic 40.0%
ACAGATACGATGCACGTTTA+TGG - Chr6:81946699-81946718 None:intergenic 40.0%
ACCTCATTACAAGATTGAGG+GGG + Chr6:81950808-81950827 MsG0680034150.01.T01:CDS 40.0%
ACTTTATTATCGGTGGTGAC+TGG + Chr6:81947849-81947868 MsG0680034150.01.T01:CDS 40.0%
AGACATTGGAGGAACATGAT+GGG - Chr6:81950385-81950404 None:intergenic 40.0%
ATACTACCAGTTATACCCAG+AGG + Chr6:81945777-81945796 MsG0680034150.01.T01:intron 40.0%
ATATGGTGGTTCAGTGACTT+TGG + Chr6:81950293-81950312 MsG0680034150.01.T01:CDS 40.0%
ATCCATTAACTGACGTAGAC+AGG + Chr6:81947042-81947061 MsG0680034150.01.T01:CDS 40.0%
ATCCTGTCTACGTCAGTTAA+TGG - Chr6:81947047-81947066 None:intergenic 40.0%
ATGGGAGCGATTACAATTGA+TGG - Chr6:81946838-81946857 None:intergenic 40.0%
ATGTTCCTCCAATGTCTCTT+AGG + Chr6:81950388-81950407 MsG0680034150.01.T01:CDS 40.0%
ATTGTGTGCCATGGCAAAAT+GGG - Chr6:81946856-81946875 None:intergenic 40.0%
CACCATTGAGTTTAATCCCA+AGG + Chr6:81949545-81949564 MsG0680034150.01.T01:CDS 40.0%
CACTCTACCAGCATATGAAT+AGG + Chr6:81948791-81948810 MsG0680034150.01.T01:intron 40.0%
CATTGAGTTTAATCCCAAGG+AGG + Chr6:81949548-81949567 MsG0680034150.01.T01:CDS 40.0%
CCCTGCATATAACGAAATTG+AGG + Chr6:81950194-81950213 MsG0680034150.01.T01:CDS 40.0%
CCTTGATCAATGCATGAGTA+AGG - Chr6:81945301-81945320 None:intergenic 40.0%
CGTGATTCTACCTACACTTA+TGG + Chr6:81950125-81950144 MsG0680034150.01.T01:CDS 40.0%
CGTTGCATTTGTTCCTTCAA+AGG + Chr6:81950784-81950803 MsG0680034150.01.T01:CDS 40.0%
CTCCTTGGGATTAAACTCAA+TGG - Chr6:81949550-81949569 None:intergenic 40.0%
CTGGTAACCTATTCATATGC+TGG - Chr6:81948801-81948820 None:intergenic 40.0%
GAACTATATTATGACCCGTG+CGG + Chr6:81946491-81946510 MsG0680034150.01.T01:intron 40.0%
GAATGGAAGGGAAAGATCAA+AGG + Chr6:81944409-81944428 MsG0680034150.01.T01:CDS 40.0%
GAGCAATCAGATTACACGTA+AGG - Chr6:81949390-81949409 None:intergenic 40.0%
GAGGATCAAACTTAGGAACA+CGG - Chr6:81947470-81947489 None:intergenic 40.0%
GATGACTCAAGTGTAGGTAT+TGG - Chr6:81945555-81945574 None:intergenic 40.0%
GATGCACACTTTATTATCGG+TGG + Chr6:81947842-81947861 MsG0680034150.01.T01:CDS 40.0%
GATTCTACCTACACTTATGG+TGG + Chr6:81950128-81950147 MsG0680034150.01.T01:CDS 40.0%
GATTCTGTGTGTTTCTCTCA+AGG + Chr6:81950237-81950256 MsG0680034150.01.T01:CDS 40.0%
GCACGTTTATGGACGTTTAA+TGG - Chr6:81946688-81946707 None:intergenic 40.0%
GGCATGTATGACCTGAAATA+TGG + Chr6:81950276-81950295 MsG0680034150.01.T01:CDS 40.0%
GGTACCTCATTACAAGATTG+AGG + Chr6:81950805-81950824 MsG0680034150.01.T01:CDS 40.0%
GTCCGAAAGTTAGATTGTGA+AGG - Chr6:81946307-81946326 None:intergenic 40.0%
GTCTTGACAGTTGCTATATC+CGG + Chr6:81945474-81945493 MsG0680034150.01.T01:intron 40.0%
GTGAATGTGTAAATGGGGAA+TGG + Chr6:81949674-81949693 MsG0680034150.01.T01:intron 40.0%
GTGGTATGTCTTTCATCTCT+TGG - Chr6:81944546-81944565 None:intergenic 40.0%
TAGCAGTAATGACGTGATTC+CGG - Chr6:81945496-81945515 None:intergenic 40.0%
TATTGTGTGCCATGGCAAAA+TGG - Chr6:81946857-81946876 None:intergenic 40.0%
TCACTGAACCACCATATTTC+AGG - Chr6:81950290-81950309 None:intergenic 40.0%
TCCATTGGAGGATCAAACTT+AGG - Chr6:81947477-81947496 None:intergenic 40.0%
TCCTAAGTTTGATCCTCCAA+TGG + Chr6:81947473-81947492 MsG0680034150.01.T01:CDS 40.0%
TGATTGAGAATGACGTTGAC+TGG + Chr6:81947102-81947121 MsG0680034150.01.T01:CDS 40.0%
TGCAAGTTAGAAAGGCTTGA+AGG + Chr6:81944613-81944632 MsG0680034150.01.T01:intron 40.0%
TGGCATTGTATACGAATCCA+CGG - Chr6:81950440-81950459 None:intergenic 40.0%
TGGTGACATATTGCCCTATT+TGG - Chr6:81947260-81947279 None:intergenic 40.0%
TGTAAATGGGGAATGGCATA+TGG + Chr6:81949681-81949700 MsG0680034150.01.T01:intron 40.0%
TGTTATAAAGAGTCCCACAG+TGG + Chr6:81949227-81949246 MsG0680034150.01.T01:intron 40.0%
TGTTATGCCAAGAAACACCA+AGG + Chr6:81950718-81950737 MsG0680034150.01.T01:CDS 40.0%
TTCAACCTAAGAGACATTGG+AGG - Chr6:81950396-81950415 None:intergenic 40.0%
TTCAGCTCATCATGCACAAA+TGG - Chr6:81947555-81947574 None:intergenic 40.0%
TTCTATCTGACAGATGACAC+CGG + Chr6:81950743-81950762 MsG0680034150.01.T01:CDS 40.0%
TTGAGACAGTGGTAGGATTA+GGG + Chr6:81949746-81949765 MsG0680034150.01.T01:intron 40.0%
TTGGATGTTATTGTGTGCCA+TGG - Chr6:81946865-81946884 None:intergenic 40.0%
TTGGTTGAGAGGAACAACAT+AGG + Chr6:81947312-81947331 MsG0680034150.01.T01:CDS 40.0%
! ACCCTAATCCTTCTTTTGAG+CGG + Chr6:81946572-81946591 MsG0680034150.01.T01:intron 40.0%
! AGGATTGGTGCACCAAAAAT+TGG + Chr6:81950881-81950900 MsG0680034150.01.T01:CDS 40.0%
! CCTTACTCATGCATTGATCA+AGG + Chr6:81945298-81945317 MsG0680034150.01.T01:intron 40.0%
! CTAACTTGCAGTTCCCTTTA+AGG - Chr6:81944603-81944622 None:intergenic 40.0%
! GATGTTGATGAAGCTGCTAA+TGG + Chr6:81950522-81950541 MsG0680034150.01.T01:CDS 40.0%
! GATTGAGAATGACGTTGACT+GGG + Chr6:81947103-81947122 MsG0680034150.01.T01:CDS 40.0%
! GGCTAGCAGGTTTAGAATAT+TGG + Chr6:81949259-81949278 MsG0680034150.01.T01:intron 40.0%
! GTCTACGTCAGTTAATGGAT+TGG - Chr6:81947042-81947061 None:intergenic 40.0%
! GTGTTGCTGATTATGTCATC+CGG + Chr6:81949998-81950017 MsG0680034150.01.T01:intron 40.0%
! TAGAAATAGGGTTGGCAAGA+GGG + Chr6:81947443-81947462 MsG0680034150.01.T01:CDS 40.0%
! TATACGAATCCACGGGTTAA+TGG - Chr6:81950432-81950451 None:intergenic 40.0%
! TGAAGCTGCTAATGGATATC+TGG + Chr6:81950530-81950549 MsG0680034150.01.T01:CDS 40.0%
! TTAGAAATAGGGTTGGCAAG+AGG + Chr6:81947442-81947461 MsG0680034150.01.T01:CDS 40.0%
! TTTGAGACAGTGGTAGGATT+AGG + Chr6:81949745-81949764 MsG0680034150.01.T01:intron 40.0%
!! AACCATTTCTGGTTAAAGGG+CGG - Chr6:81948658-81948677 None:intergenic 40.0%
!! AGTTAATGGATTGGGATCCA+AGG - Chr6:81947033-81947052 None:intergenic 40.0%
!! ATGGAGTGTTGTCAATAGCA+AGG + Chr6:81944218-81944237 MsG0680034150.01.T01:CDS 40.0%
!! CACGATTTTGGTGACCAAAT+AGG + Chr6:81947243-81947262 MsG0680034150.01.T01:CDS 40.0%
!! CATGTTGATGACTCAAGTGT+AGG - Chr6:81945561-81945580 None:intergenic 40.0%
!! CATGTTGGTTTCCTTTGTAC+AGG + Chr6:81947191-81947210 MsG0680034150.01.T01:intron 40.0%
!! CATTCGAAGTATTGGTTGAG+AGG + Chr6:81947301-81947320 MsG0680034150.01.T01:CDS 40.0%
!! GAGGTGCTGGTTGAAAAAAT+TGG + Chr6:81950213-81950232 MsG0680034150.01.T01:CDS 40.0%
!! GTTAATGGATTGGGATCCAA+GGG - Chr6:81947032-81947051 None:intergenic 40.0%
!! TCTATAAGGGTTGATGGGTT+TGG - Chr6:81950460-81950479 None:intergenic 40.0%
!! TGCACTTTTTGGGAAAGCTA+TGG + Chr6:81945219-81945238 MsG0680034150.01.T01:intron 40.0%
!! TGGAGTGTTGTCAATAGCAA+GGG + Chr6:81944219-81944238 MsG0680034150.01.T01:CDS 40.0%
!! TTGTTGTTTGAGACAGTGGT+AGG + Chr6:81949739-81949758 MsG0680034150.01.T01:intron 40.0%
!!! TACAGGCGTTTGTTTTGTTG+TGG + Chr6:81948413-81948432 MsG0680034150.01.T01:intron 40.0%
AAGGCTAGACGTCTTAAAGC+TGG + Chr6:81947884-81947903 MsG0680034150.01.T01:CDS 45.0%
ACAGGATAACACCAGCGTAT+CGG - Chr6:81946215-81946234 None:intergenic 45.0%
ACCTGGATTACAAACCGAGA+CGG - Chr6:81950330-81950349 None:intergenic 45.0%
AGCCGAAAATGATCCACTGT+GGG - Chr6:81949243-81949262 None:intergenic 45.0%
AGTTTAGCGCGCTAAGCAAT+TGG - Chr6:81946653-81946672 None:intergenic 45.0%
ATCCAGGTCAAGGATCGTTA+CGG + Chr6:81950342-81950361 MsG0680034150.01.T01:CDS 45.0%
ATGCACGATTTACGCATCCT+GGG - Chr6:81949159-81949178 None:intergenic 45.0%
ATTACAAGATTGAGGGGGGA+TGG + Chr6:81950813-81950832 MsG0680034150.01.T01:CDS 45.0%
ATTCAGATGTGTGACCACCA+CGG - Chr6:81944393-81944412 None:intergenic 45.0%
ATTTGCCCACTTAGACAAGC+AGG + Chr6:81946013-81946032 MsG0680034150.01.T01:intron 45.0%
CAAAGAGCAATATCCAACGG+TGG - Chr6:81948736-81948755 None:intergenic 45.0%
CATAACAGACGCCTGTACAA+AGG - Chr6:81947205-81947224 None:intergenic 45.0%
CCAATCAACATCAGCTGCAA+TGG - Chr6:81949466-81949485 None:intergenic 45.0%
CCATTGCAGCTGATGTTGAT+TGG + Chr6:81949463-81949482 MsG0680034150.01.T01:intron 45.0%
CCCGCTCAAAAGAAGGATTA+GGG - Chr6:81946576-81946595 None:intergenic 45.0%
CCTCATTACAAGATTGAGGG+GGG + Chr6:81950809-81950828 MsG0680034150.01.T01:CDS 45.0%
CTGTGTGTTTCTCTCAAGGT+TGG + Chr6:81950241-81950260 MsG0680034150.01.T01:CDS 45.0%
GACATTGGAGGAACATGATG+GGG - Chr6:81950384-81950403 None:intergenic 45.0%
GAGACATTGGAGGAACATGA+TGG - Chr6:81950386-81950405 None:intergenic 45.0%
GAGTAGACATGAGAGAAGCA+AGG - Chr6:81946066-81946085 None:intergenic 45.0%
GAGTTTAATCCCAAGGAGGT+AGG + Chr6:81949552-81949571 MsG0680034150.01.T01:intron 45.0%
GATCTCTTTCCATTAACCCG+TGG + Chr6:81950420-81950439 MsG0680034150.01.T01:CDS 45.0%
GGCATTGTATACGAATCCAC+GGG - Chr6:81950439-81950458 None:intergenic 45.0%
GGTCACACATCTGAATGGAA+GGG + Chr6:81944397-81944416 MsG0680034150.01.T01:CDS 45.0%
GTAAACGAAGCCTACTGATC+TGG + Chr6:81948348-81948367 MsG0680034150.01.T01:intron 45.0%
GTTTAGCGCGCTAAGCAATT+GGG - Chr6:81946652-81946671 None:intergenic 45.0%
TAGCCGAAAATGATCCACTG+TGG - Chr6:81949244-81949263 None:intergenic 45.0%
TCATCATGCACAAATGGAGC+AGG - Chr6:81947549-81947568 None:intergenic 45.0%
TCCCGCTCAAAAGAAGGATT+AGG - Chr6:81946577-81946596 None:intergenic 45.0%
TCTGCGTTGTATAGTCTCAG+AGG + Chr6:81949352-81949371 MsG0680034150.01.T01:intron 45.0%
TGCTTAGCGCGCTAAACTAT+TGG + Chr6:81946655-81946674 MsG0680034150.01.T01:intron 45.0%
TGGTCACACATCTGAATGGA+AGG + Chr6:81944396-81944415 MsG0680034150.01.T01:CDS 45.0%
TGGTTAATGTTCAGCCGTCT+CGG + Chr6:81950313-81950332 MsG0680034150.01.T01:CDS 45.0%
TTGATGAGCGTGGAAATAGG+TGG + Chr6:81947789-81947808 MsG0680034150.01.T01:CDS 45.0%
TTGTAGGTGCTTGCTTACGT+TGG + Chr6:81947719-81947738 MsG0680034150.01.T01:intron 45.0%
TTTAGCGCGCTAAGCAATTG+GGG - Chr6:81946651-81946670 None:intergenic 45.0%
! AAATAGGTGGACTTGCACTC+TGG + Chr6:81947802-81947821 MsG0680034150.01.T01:CDS 45.0%
! AGTTTGGGATGAAGCTCCAA+TGG + Chr6:81945635-81945654 MsG0680034150.01.T01:CDS 45.0%
! AGTTTTCGGTCCAGATCAGT+AGG - Chr6:81948361-81948380 None:intergenic 45.0%
! CCCTAATCCTTCTTTTGAGC+GGG + Chr6:81946573-81946592 MsG0680034150.01.T01:intron 45.0%
! GCATTGATCAAGGATGCACA+AGG + Chr6:81945308-81945327 MsG0680034150.01.T01:intron 45.0%
! GTCCCACAGTGGATCATTTT+CGG + Chr6:81949238-81949257 MsG0680034150.01.T01:intron 45.0%
! TAATCGCTCCCATTTTGCCA+TGG + Chr6:81946845-81946864 MsG0680034150.01.T01:intron 45.0%
! TCGGTTTGTAATCCAGGTCA+AGG + Chr6:81950332-81950351 MsG0680034150.01.T01:CDS 45.0%
! TCTTTTTGTTGCAGCACCCT+TGG + Chr6:81947013-81947032 MsG0680034150.01.T01:intron 45.0%
! TGCAGCTGATGTTGATTGGT+TGG + Chr6:81949467-81949486 MsG0680034150.01.T01:intron 45.0%
!! CAAGGTTGGCTTGAACTCAA+TGG + Chr6:81950255-81950274 MsG0680034150.01.T01:CDS 45.0%
!! TGGTTGATGAGCGTGGAAAT+AGG + Chr6:81947786-81947805 MsG0680034150.01.T01:CDS 45.0%
!!! TTTATATTTAAATTAGTTTA+TGG + Chr6:81950596-81950615 MsG0680034150.01.T01:intron 5.0%
AGGTGGTAATCCTACCTCCT+TGG - Chr6:81949565-81949584 None:intergenic 50.0%
CACGTTTCCCGCTCAAAAGA+AGG - Chr6:81946583-81946602 None:intergenic 50.0%
CATGCACGATTTACGCATCC+TGG - Chr6:81949160-81949179 None:intergenic 50.0%
CCCCCCTCAATCTTGTAATG+AGG - Chr6:81950812-81950831 None:intergenic 50.0%
GACTGTGGTGAGTAGAGTTG+TGG + Chr6:81950628-81950647 MsG0680034150.01.T01:intron 50.0%
GAGTGAGTAACTAGGCCAAG+TGG - Chr6:81945933-81945952 None:intergenic 50.0%
GGTGGTAATCCTACCTCCTT+GGG - Chr6:81949564-81949583 None:intergenic 50.0%
GTGGTGGTCACACATCTGAA+TGG + Chr6:81944392-81944411 MsG0680034150.01.T01:CDS 50.0%
TCCAGGTCAAGGATCGTTAC+GGG + Chr6:81950343-81950362 MsG0680034150.01.T01:CDS 50.0%
TCTTAAAGCTGGTGCACGTG+TGG + Chr6:81947895-81947914 MsG0680034150.01.T01:intron 50.0%
TGCACGATTTACGCATCCTG+GGG - Chr6:81949158-81949177 None:intergenic 50.0%
TTGTCAGAACGGCTTCCTCT+GGG - Chr6:81945795-81945814 None:intergenic 50.0%
TTTGATCCTTTACCTCCCCC+AGG + Chr6:81949139-81949158 MsG0680034150.01.T01:intron 50.0%
! GTGGATCATTTTCGGCTAGC+AGG + Chr6:81949246-81949265 MsG0680034150.01.T01:intron 50.0%
! TGCACTCTGGATTTTGTGCC+CGG + Chr6:81947815-81947834 MsG0680034150.01.T01:CDS 50.0%
!! CTGAACTTGGTTGATGAGCG+TGG + Chr6:81947779-81947798 MsG0680034150.01.T01:CDS 50.0%
!! TGAGATGAGCGCTGGAATTC+TGG + Chr6:81947611-81947630 MsG0680034150.01.T01:CDS 50.0%
CAACGGTACAGTTCCACACG+TGG - Chr6:81950769-81950788 None:intergenic 55.0%
CCAGGTCAAGGATCGTTACG+GGG + Chr6:81950344-81950363 MsG0680034150.01.T01:CDS 55.0%
CGGCTTCCTCTGGGTATAAC+TGG - Chr6:81945786-81945805 None:intergenic 55.0%
CTTGTCAGAACGGCTTCCTC+TGG - Chr6:81945796-81945815 None:intergenic 55.0%
GATGCTGATGAGATGAGCGC+TGG + Chr6:81947603-81947622 MsG0680034150.01.T01:CDS 55.0%
GCACGATTTACGCATCCTGG+GGG - Chr6:81949157-81949176 None:intergenic 55.0%
GCGCTAAGCAATTGGGGTAG+TGG - Chr6:81946645-81946664 None:intergenic 55.0%
GCTGGCACGTTCATCAGGAT+TGG + Chr6:81950866-81950885 MsG0680034150.01.T01:CDS 55.0%
GGCCGCCCTTTAACCAGAAA+TGG + Chr6:81948653-81948672 MsG0680034150.01.T01:intron 55.0%
GTAGCGTTCATGCCAACTCC+AGG - Chr6:81947932-81947951 None:intergenic 55.0%
GTGATTGGAGCTCCTGGAGT+TGG + Chr6:81947917-81947936 MsG0680034150.01.T01:intron 55.0%
TCACTGCTGGCACGTTCATC+AGG + Chr6:81950861-81950880 MsG0680034150.01.T01:CDS 55.0%
TGACTGGAGCAGGATGGTGA+AGG + Chr6:81947865-81947884 MsG0680034150.01.T01:CDS 55.0%
TTATCGGTGGTGACTGGAGC+AGG + Chr6:81947855-81947874 MsG0680034150.01.T01:CDS 55.0%
! GCCGTCTCGGTTTGTAATCC+AGG + Chr6:81950326-81950345 MsG0680034150.01.T01:CDS 55.0%
!! ACGATTCTGGCTCTGATCCG+TGG + Chr6:81944373-81944392 MsG0680034150.01.T01:CDS 55.0%
!! ATTCTGGCTCTGATCCGTGG+TGG + Chr6:81944376-81944395 MsG0680034150.01.T01:CDS 55.0%
ACGCATCCTGGGGGAGGTAA+AGG - Chr6:81949148-81949167 None:intergenic 60.0%
ACGTGCCAGCAGTGACTCCA+CGG - Chr6:81950856-81950875 None:intergenic 60.0%
CCCCGTAACGATCCTTGACC+TGG - Chr6:81950347-81950366 None:intergenic 60.0%
CGATTTACGCATCCTGGGGG+AGG - Chr6:81949154-81949173 None:intergenic 60.0%
CGTGTGGTGATTGGAGCTCC+TGG + Chr6:81947911-81947930 MsG0680034150.01.T01:intron 60.0%
GCGCACCCCATCCTCTAGTA+AGG - Chr6:81947344-81947363 None:intergenic 60.0%
GCTGGTGCACGTGTGGTGAT+TGG + Chr6:81947902-81947921 MsG0680034150.01.T01:intron 60.0%
GGTACAGTTCCACACGTGGC+CGG - Chr6:81950765-81950784 None:intergenic 60.0%
TCAAGCCGTGGAGTCACTGC+TGG + Chr6:81950848-81950867 MsG0680034150.01.T01:CDS 60.0%
TTATGACCCGTGCGGCAGCA+CGG + Chr6:81946499-81946518 MsG0680034150.01.T01:intron 60.0%
! TTTTCACCCGTGCTGCCGCA+CGG - Chr6:81946509-81946528 None:intergenic 60.0%
CAGATGACACCGGCCACGTG+TGG + Chr6:81950753-81950772 MsG0680034150.01.T01:CDS 65.0%
CGGTGGTGACTGGAGCAGGA+TGG + Chr6:81947859-81947878 MsG0680034150.01.T01:CDS 65.0%
TATGACCCGTGCGGCAGCAC+GGG + Chr6:81946500-81946519 MsG0680034150.01.T01:intron 65.0%
TTTCACCCGTGCTGCCGCAC+GGG - Chr6:81946508-81946527 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr6 gene 81944165 81950940 81944165 ID=MsG0680034150.01;Name=MsG0680034150.01
Chr6 mRNA 81944165 81950940 81944165 ID=MsG0680034150.01.T01;Parent=MsG0680034150.01;Name=MsG0680034150.01.T01;_AED=0.13;_eAED=0.13;_QI=0|0|0|0.66|1|1|9|0|654
Chr6 exon 81944165 81944278 81944165 ID=MsG0680034150.01.T01:exon:9521;Parent=MsG0680034150.01.T01
Chr6 exon 81944367 81944457 81944367 ID=MsG0680034150.01.T01:exon:9520;Parent=MsG0680034150.01.T01
Chr6 exon 81945484 81945762 81945484 ID=MsG0680034150.01.T01:exon:9519;Parent=MsG0680034150.01.T01
Chr6 exon 81947027 81947124 81947027 ID=MsG0680034150.01.T01:exon:9518;Parent=MsG0680034150.01.T01
Chr6 exon 81947213 81947632 81947213 ID=MsG0680034150.01.T01:exon:9517;Parent=MsG0680034150.01.T01
Chr6 exon 81947725 81947905 81947725 ID=MsG0680034150.01.T01:exon:9516;Parent=MsG0680034150.01.T01
Chr6 exon 81949472 81949569 81949472 ID=MsG0680034150.01.T01:exon:9515;Parent=MsG0680034150.01.T01
Chr6 exon 81950120 81950551 81950120 ID=MsG0680034150.01.T01:exon:9514;Parent=MsG0680034150.01.T01
Chr6 exon 81950689 81950940 81950689 ID=MsG0680034150.01.T01:exon:9513;Parent=MsG0680034150.01.T01
Chr6 CDS 81944165 81944278 81944165 ID=MsG0680034150.01.T01:cds;Parent=MsG0680034150.01.T01
Chr6 CDS 81944367 81944457 81944367 ID=MsG0680034150.01.T01:cds;Parent=MsG0680034150.01.T01
Chr6 CDS 81945484 81945762 81945484 ID=MsG0680034150.01.T01:cds;Parent=MsG0680034150.01.T01
Chr6 CDS 81947027 81947124 81947027 ID=MsG0680034150.01.T01:cds;Parent=MsG0680034150.01.T01
Chr6 CDS 81947213 81947632 81947213 ID=MsG0680034150.01.T01:cds;Parent=MsG0680034150.01.T01
Chr6 CDS 81947725 81947905 81947725 ID=MsG0680034150.01.T01:cds;Parent=MsG0680034150.01.T01
Chr6 CDS 81949472 81949569 81949472 ID=MsG0680034150.01.T01:cds;Parent=MsG0680034150.01.T01
Chr6 CDS 81950120 81950551 81950120 ID=MsG0680034150.01.T01:cds;Parent=MsG0680034150.01.T01
Chr6 CDS 81950689 81950940 81950689 ID=MsG0680034150.01.T01:cds;Parent=MsG0680034150.01.T01
Gene Sequence

>MsG0680034150.01.T01

ATGTCAATGACTCTTAAGGAAACATGGAAACTTGTTGTTCGTATTCTTGATGTATGGAGTGTTGTCAATAGCAAGGGTAATGAACATCTTGAAATGGTTATGATGGATTCAAAGGGTGATACGATTCTGGCTCTGATCCGTGGTGGTCACACATCTGAATGGAAGGGAAAGATCAAAGGAGATATGACGTGTATCATCAACAATGTTGCTATATCCGGAATCACGTCATTACTGCTACCTAGAGATCAAACAATACATTCAAAGATTAAAATCCCAATACCTACACTTGAGTCATCAACATGCGATATAGATAAAGGAAGTGATCATACAGAACTTTTGAAATTAACCAAGTTGATAGTTTGGGATGAAGCTCCAATGGCTCACAAGTTTTGTTTTGAAACATGGGATAGAACACTCAAAGACATAATGACCGGATCTAAGTCTTCATCAAAAATATTTGGAGGGAATGTAATTATTTTCGGTGCACCCTTGGATCCCAATCCATTAACTGACGTAGACAGGATGATCAATGAATTGAGGTTGAAATATAGAACATATATGATTGAGAATGACGTTGACTGGGCGTCTGTTATGCTCCCTATGATGTTCAAGCACGATTTTGGTGACCAAATAGGGCAATATGTCACCATGGTTGATCCTAAAAACAACACATTCGAAGTATTGGTTGAGAGGAACAACATAGGTATTTACCTTACTAGAGGATGGGGTGCGCTTTGTGACTTCTACAAATTGAAACTTGGTGCTTGGATCACCATTGTTTTTGTTGGTAATGGAAGGTTCAACATAAGTGTTAGAAATAGGGTTGGCAAGAGGGTCCGTGTTCCTAAGTTTGATCCTCCAATGGAGTTTTATGTTGATAGGAATGCTGTCCCTATCACTCTATTCAACGTTGTGCCTGCTCCATTTGTGCATGATGAGCTGAATTTTCAGCACACATATGAAAAAAGGCTTGATGCTGATGAGATGAGCGCTGGAATTCTGGTGCTTGCTTACGTTGGATTTTCTCAGATGTGTTTGGATATAAGCAGCAATACTCTGAACTTGGTTGATGAGCGTGGAAATAGGTGGACTTGCACTCTGGATTTTGTGCCCGGAAATGATGCACACTTTATTATCGGTGGTGACTGGAGCAGGATGGTGAAGGCTAGACGTCTTAAAGCTGCTGATGTTGATTGGTTGGCGATACTAGATGATCAGAGTCTTTATGATATGGCTTCACTTAAATGGCGCACATTCACCATTGAGTTTAATCCCAAGGAGAAATACGTGATTCTACCTACACTTATGGTGGATACAATTGGCTGTGAACTTAGTAGATTTGCGGTGTTGAATGACCCTGCATATAACGAAATTGAGGTGCTGGTTGAAAAAATTGGTGATTCTGTGTGTTTCTCTCAAGGTTGGCTTGAACTCAATGGCATGTATGACCTGAAATATGGTGGTTCAGTGACTTTGGTTAATGTTCAGCCGTCTCGGTTTGTAATCCAGGTCAAGGATCGTTACGGGGAAGAGATCAATTATCCCCATCATGTTCCTCCAATGTCTCTTAGGTTGAATCACGATCTCTTTCCATTAACCCGTGGATTCGTATACAATGCCAAACCCATCAACCCTTATAGACATGATCGTAATAACTTCTTGATTAGTTTCAGCAAATGGTTGGATGTTGATGAAGCTGCTAATGGATATCTGACCATTTCATATGACCAATTCTTAGAATCTGTTATGCCAAGAAACACCAAGGATTTCTATCTGACAGATGACACCGGCCACGTGTGGAACTGTACCGTTGCATTTGTTCCTTCAAAGGTACCTCATTACAAGATTGAGGGGGGATGGAAGAATTTCTGTTCAAGCCGTGGAGTCACTGCTGGCACGTTCATCAGGATTGGTGCACCAAAAATTGGAGCGAACATTTCATTCTTTGTCACTTTGCAATTTTAG
Protein sequence

>MsG0680034150.01.T01

MSMTLKETWKLVVRILDVWSVVNSKGNEHLEMVMMDSKGDTILALIRGGHTSEWKGKIKGDMTCIINNVAISGITSLLLPRDQTIHSKIKIPIPTLESSTCDIDKGSDHTELLKLTKLIVWDEAPMAHKFCFETWDRTLKDIMTGSKSSSKIFGGNVIIFGAPLDPNPLTDVDRMINELRLKYRTYMIENDVDWASVMLPMMFKHDFGDQIGQYVTMVDPKNNTFEVLVERNNIGIYLTRGWGALCDFYKLKLGAWITIVFVGNGRFNISVRNRVGKRVRVPKFDPPMEFYVDRNAVPITLFNVVPAPFVHDELNFQHTYEKRLDADEMSAGILVLAYVGFSQMCLDISSNTLNLVDERGNRWTCTLDFVPGNDAHFIIGGDWSRMVKARRLKAADVDWLAILDDQSLYDMASLKWRTFTIEFNPKEKYVILPTLMVDTIGCELSRFAVLNDPAYNEIEVLVEKIGDSVCFSQGWLELNGMYDLKYGGSVTLVNVQPSRFVIQVKDRYGEEINYPHHVPPMSLRLNHDLFPLTRGFVYNAKPINPYRHDRNNFLISFSKWLDVDEAANGYLTISYDQFLESVMPRNTKDFYLTDDTGHVWNCTVAFVPSKVPHYKIEGGWKNFCSSRGVTAGTFIRIGAPKIGANISFFVTLQF*