Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004746.01.T01 | XP_003598225.1 | 96.584 | 527 | 18 | 0 | 1 | 527 | 1 | 527 | 0 | 1079 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004746.01.T01 | Q9FHN5 | 55.556 | 504 | 209 | 7 | 35 | 527 | 37 | 536 | 0 | 581 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004746.01.T01 | G7IYH9 | 96.584 | 527 | 18 | 0 | 1 | 527 | 1 | 527 | 0.0 | 1079 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0480019214.01 | MsG0180004746.01 | PPI |
| MsG0480019215.01 | MsG0180004746.01 | PPI |
| MsG0380011686.01 | MsG0180004746.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004746.01.T01 | MTR_3g008640 | 96.584 | 527 | 18 | 0 | 1 | 527 | 1 | 527 | 0.0 | 1079 |
| MsG0180004746.01.T01 | MTR_3g008720 | 96.205 | 527 | 20 | 0 | 1 | 527 | 1 | 527 | 0.0 | 1075 |
| MsG0180004746.01.T01 | MTR_3g033690 | 94.118 | 527 | 30 | 1 | 1 | 527 | 1 | 526 | 0.0 | 1048 |
| MsG0180004746.01.T01 | MTR_7g053360 | 95.825 | 527 | 22 | 0 | 1 | 527 | 1 | 527 | 0.0 | 1048 |
| MsG0180004746.01.T01 | MTR_3g008700 | 95.636 | 527 | 23 | 0 | 1 | 527 | 1 | 527 | 0.0 | 1045 |
| MsG0180004746.01.T01 | MTR_4g035980 | 65.810 | 506 | 161 | 5 | 32 | 527 | 36 | 539 | 0.0 | 699 |
| MsG0180004746.01.T01 | MTR_4g025690 | 52.471 | 526 | 224 | 12 | 7 | 527 | 9 | 513 | 8.69e-180 | 515 |
| MsG0180004746.01.T01 | MTR_4g025730 | 48.120 | 532 | 241 | 14 | 3 | 527 | 6 | 509 | 2.55e-166 | 481 |
| MsG0180004746.01.T01 | MTR_8g104655 | 45.914 | 514 | 248 | 8 | 36 | 527 | 36 | 541 | 1.30e-155 | 455 |
| MsG0180004746.01.T01 | MTR_7g108905 | 48.636 | 440 | 205 | 7 | 102 | 523 | 116 | 552 | 8.62e-143 | 423 |
| MsG0180004746.01.T01 | MTR_8g104645 | 56.932 | 339 | 141 | 2 | 193 | 527 | 35 | 372 | 4.29e-139 | 407 |
| MsG0180004746.01.T01 | MTR_7g050980 | 48.678 | 454 | 210 | 10 | 88 | 527 | 111 | 555 | 8.57e-139 | 412 |
| MsG0180004746.01.T01 | MTR_7g050870 | 48.238 | 454 | 212 | 11 | 88 | 527 | 110 | 554 | 4.32e-136 | 405 |
| MsG0180004746.01.T01 | MTR_7g050950 | 48.970 | 437 | 203 | 11 | 103 | 527 | 125 | 553 | 5.15e-135 | 403 |
| MsG0180004746.01.T01 | MTR_4g087980 | 49.318 | 440 | 197 | 10 | 102 | 527 | 89 | 516 | 4.53e-134 | 399 |
| MsG0180004746.01.T01 | MTR_2g044880 | 46.224 | 437 | 218 | 8 | 102 | 527 | 95 | 525 | 1.25e-130 | 390 |
| MsG0180004746.01.T01 | MTR_3g091380 | 45.870 | 460 | 216 | 10 | 97 | 527 | 142 | 597 | 1.56e-130 | 393 |
| MsG0180004746.01.T01 | MTR_8g104580 | 41.829 | 514 | 236 | 10 | 36 | 527 | 28 | 500 | 9.70e-130 | 387 |
| MsG0180004746.01.T01 | MTR_4g087970 | 45.475 | 442 | 227 | 6 | 96 | 527 | 80 | 517 | 2.87e-129 | 387 |
| MsG0180004746.01.T01 | MTR_8g023310 | 42.614 | 528 | 257 | 12 | 36 | 527 | 72 | 589 | 7.39e-129 | 388 |
| MsG0180004746.01.T01 | MTR_4g025670 | 45.370 | 432 | 220 | 6 | 102 | 527 | 68 | 489 | 2.72e-127 | 380 |
| MsG0180004746.01.T01 | MTR_1g008140 | 43.871 | 465 | 225 | 10 | 97 | 527 | 145 | 607 | 4.19e-123 | 374 |
| MsG0180004746.01.T01 | MTR_7g112580 | 44.494 | 445 | 217 | 8 | 102 | 527 | 109 | 542 | 9.70e-123 | 371 |
| MsG0180004746.01.T01 | MTR_1g083520 | 41.155 | 537 | 282 | 13 | 7 | 527 | 10 | 528 | 2.22e-122 | 369 |
| MsG0180004746.01.T01 | MTR_2g044810 | 38.364 | 550 | 300 | 11 | 1 | 527 | 1 | 534 | 7.95e-122 | 368 |
| MsG0180004746.01.T01 | MTR_8g042900 | 41.506 | 518 | 275 | 10 | 29 | 527 | 73 | 581 | 4.70e-121 | 368 |
| MsG0180004746.01.T01 | MTR_7g108900 | 42.827 | 467 | 222 | 9 | 102 | 527 | 98 | 560 | 1.40e-120 | 366 |
| MsG0180004746.01.T01 | MTR_4g124520 | 38.067 | 507 | 282 | 9 | 30 | 527 | 38 | 521 | 5.28e-119 | 360 |
| MsG0180004746.01.T01 | MTR_1g054880 | 38.947 | 570 | 276 | 15 | 8 | 527 | 11 | 558 | 3.93e-118 | 360 |
| MsG0180004746.01.T01 | MTR_1g088020 | 40.977 | 532 | 266 | 14 | 36 | 527 | 32 | 555 | 6.04e-118 | 359 |
| MsG0180004746.01.T01 | MTR_3g010780 | 42.827 | 481 | 245 | 11 | 68 | 527 | 103 | 574 | 7.57e-118 | 359 |
| MsG0180004746.01.T01 | MTR_7g108875 | 39.479 | 537 | 266 | 13 | 36 | 527 | 42 | 564 | 6.26e-117 | 357 |
| MsG0180004746.01.T01 | MTR_8g042910 | 51.652 | 333 | 154 | 4 | 200 | 527 | 282 | 612 | 1.33e-116 | 357 |
| MsG0180004746.01.T01 | MTR_7g108890 | 39.434 | 530 | 276 | 9 | 36 | 527 | 40 | 562 | 4.74e-113 | 347 |
| MsG0180004746.01.T01 | MTR_3g010770 | 51.506 | 332 | 154 | 5 | 201 | 527 | 246 | 575 | 4.86e-112 | 344 |
| MsG0180004746.01.T01 | MTR_1g088225 | 40.414 | 532 | 267 | 15 | 36 | 527 | 32 | 553 | 5.56e-112 | 343 |
| MsG0180004746.01.T01 | MTR_0458s0030 | 56.835 | 278 | 114 | 4 | 253 | 527 | 40 | 314 | 7.97e-108 | 325 |
| MsG0180004746.01.T01 | MTR_1g088040 | 56.835 | 278 | 114 | 4 | 253 | 527 | 40 | 314 | 7.97e-108 | 325 |
| MsG0180004746.01.T01 | MTR_8g023150 | 38.716 | 514 | 281 | 11 | 36 | 527 | 81 | 582 | 8.29e-107 | 331 |
| MsG0180004746.01.T01 | MTR_4g124550 | 39.957 | 463 | 243 | 8 | 92 | 527 | 139 | 593 | 3.48e-104 | 325 |
| MsG0180004746.01.T01 | MTR_0618s0020 | 61.842 | 228 | 86 | 1 | 300 | 527 | 2 | 228 | 1.07e-102 | 308 |
| MsG0180004746.01.T01 | MTR_1g083470 | 34.578 | 509 | 308 | 8 | 36 | 523 | 62 | 566 | 1.06e-99 | 313 |
| MsG0180004746.01.T01 | MTR_1g083500 | 34.578 | 509 | 308 | 8 | 36 | 523 | 62 | 566 | 1.06e-99 | 313 |
| MsG0180004746.01.T01 | MTR_1g083510 | 37.288 | 472 | 235 | 12 | 103 | 526 | 124 | 582 | 1.06e-97 | 308 |
| MsG0180004746.01.T01 | MTR_4g005170 | 38.149 | 443 | 248 | 8 | 103 | 523 | 133 | 571 | 1.79e-97 | 308 |
| MsG0180004746.01.T01 | MTR_1g083490 | 37.698 | 443 | 250 | 8 | 103 | 523 | 133 | 571 | 1.04e-96 | 305 |
| MsG0180004746.01.T01 | MTR_4g005180 | 34.510 | 510 | 307 | 9 | 36 | 523 | 49 | 553 | 9.36e-96 | 302 |
| MsG0180004746.01.T01 | MTR_4g120290 | 34.280 | 528 | 307 | 13 | 28 | 526 | 55 | 571 | 8.75e-95 | 300 |
| MsG0180004746.01.T01 | MTR_1g086210 | 37.821 | 468 | 270 | 12 | 68 | 527 | 115 | 569 | 1.27e-94 | 299 |
| MsG0180004746.01.T01 | MTR_3g095920 | 35.348 | 546 | 302 | 14 | 7 | 516 | 23 | 553 | 2.51e-94 | 298 |
| MsG0180004746.01.T01 | MTR_7g112590 | 33.793 | 580 | 320 | 17 | 1 | 526 | 13 | 582 | 1.30e-93 | 297 |
| MsG0180004746.01.T01 | MTR_1g086190 | 36.561 | 506 | 282 | 11 | 49 | 527 | 70 | 563 | 2.72e-93 | 295 |
| MsG0180004746.01.T01 | MTR_2g044810 | 52.362 | 254 | 119 | 2 | 274 | 527 | 214 | 465 | 8.91e-93 | 291 |
| MsG0180004746.01.T01 | MTR_4g120280 | 37.947 | 419 | 232 | 6 | 132 | 526 | 157 | 571 | 1.16e-91 | 292 |
| MsG0180004746.01.T01 | MTR_8g088610 | 42.690 | 342 | 191 | 3 | 184 | 524 | 36 | 373 | 2.26e-90 | 282 |
| MsG0180004746.01.T01 | MTR_2g436040 | 32.601 | 546 | 326 | 14 | 2 | 524 | 17 | 543 | 4.98e-90 | 288 |
| MsG0180004746.01.T01 | MTR_8g093460 | 35.824 | 522 | 288 | 15 | 28 | 519 | 39 | 543 | 5.99e-89 | 284 |
| MsG0180004746.01.T01 | MTR_2g044660 | 47.134 | 314 | 159 | 5 | 214 | 527 | 326 | 632 | 8.48e-89 | 286 |
| MsG0180004746.01.T01 | MTR_2g436050 | 32.689 | 569 | 317 | 14 | 2 | 526 | 17 | 563 | 1.23e-86 | 278 |
| MsG0180004746.01.T01 | MTR_7g110440 | 36.364 | 473 | 275 | 11 | 68 | 527 | 115 | 574 | 2.62e-86 | 278 |
| MsG0180004746.01.T01 | MTR_7g110490 | 37.179 | 468 | 268 | 12 | 68 | 522 | 115 | 569 | 1.48e-85 | 276 |
| MsG0180004746.01.T01 | MTR_7g110510 | 37.179 | 468 | 268 | 12 | 68 | 522 | 115 | 569 | 1.48e-85 | 276 |
| MsG0180004746.01.T01 | MTR_5g083620 | 39.607 | 356 | 203 | 7 | 178 | 527 | 7 | 356 | 1.57e-81 | 258 |
| MsG0180004746.01.T01 | MTR_7g110560 | 33.680 | 481 | 282 | 8 | 54 | 527 | 99 | 549 | 5.23e-76 | 250 |
| MsG0180004746.01.T01 | MTR_7g110420 | 33.333 | 477 | 266 | 10 | 102 | 527 | 111 | 586 | 1.30e-75 | 250 |
| MsG0180004746.01.T01 | MTR_2g105560 | 40.952 | 315 | 170 | 5 | 214 | 527 | 40 | 339 | 1.48e-75 | 242 |
| MsG0180004746.01.T01 | MTR_7g107180 | 40.764 | 314 | 172 | 6 | 215 | 527 | 7 | 307 | 1.27e-72 | 233 |
| MsG0180004746.01.T01 | MTR_7g110430 | 31.692 | 467 | 241 | 12 | 102 | 527 | 111 | 540 | 4.07e-64 | 218 |
| MsG0180004746.01.T01 | MTR_7g111560 | 29.799 | 547 | 347 | 17 | 1 | 527 | 27 | 556 | 2.02e-63 | 217 |
| MsG0180004746.01.T01 | MTR_2g039530 | 39.482 | 309 | 170 | 7 | 188 | 494 | 26 | 319 | 2.09e-57 | 195 |
| MsG0180004746.01.T01 | MTR_0458s0010 | 31.391 | 532 | 280 | 18 | 36 | 527 | 32 | 518 | 2.17e-57 | 199 |
| MsG0180004746.01.T01 | MTR_6g012800 | 34.843 | 287 | 164 | 6 | 213 | 489 | 4 | 277 | 1.21e-54 | 187 |
| MsG0180004746.01.T01 | MTR_6g088810 | 35.890 | 326 | 180 | 10 | 203 | 516 | 69 | 377 | 7.18e-53 | 184 |
| MsG0180004746.01.T01 | MTR_6g024165 | 36.656 | 311 | 169 | 9 | 217 | 517 | 43 | 335 | 5.93e-52 | 180 |
| MsG0180004746.01.T01 | MTR_8g102380 | 35.417 | 336 | 181 | 12 | 197 | 518 | 66 | 379 | 1.25e-51 | 181 |
| MsG0180004746.01.T01 | MTR_1g086540 | 36.111 | 324 | 180 | 8 | 205 | 518 | 40 | 346 | 1.33e-51 | 179 |
| MsG0180004746.01.T01 | MTR_7g011530 | 34.035 | 285 | 161 | 6 | 217 | 489 | 8 | 277 | 5.47e-49 | 172 |
| MsG0180004746.01.T01 | MTR_7g102600 | 30.894 | 369 | 218 | 11 | 156 | 516 | 54 | 393 | 8.81e-47 | 168 |
| MsG0180004746.01.T01 | MTR_5g083590 | 32.063 | 315 | 161 | 5 | 214 | 527 | 6 | 268 | 1.30e-43 | 156 |
| MsG0180004746.01.T01 | MTR_8g102380 | 35.587 | 281 | 149 | 9 | 197 | 463 | 66 | 328 | 2.83e-43 | 157 |
| MsG0180004746.01.T01 | MTR_5g093970 | 33.224 | 304 | 188 | 5 | 215 | 518 | 43 | 331 | 6.23e-43 | 156 |
| MsG0180004746.01.T01 | MTR_6g042660 | 33.808 | 281 | 159 | 9 | 215 | 489 | 37 | 296 | 1.43e-42 | 155 |
| MsG0180004746.01.T01 | MTR_5g095490 | 33.766 | 308 | 175 | 9 | 221 | 516 | 67 | 357 | 8.63e-42 | 154 |
| MsG0180004746.01.T01 | MTR_7g092780 | 32.484 | 314 | 188 | 7 | 215 | 518 | 90 | 389 | 1.73e-41 | 153 |
| MsG0180004746.01.T01 | MTR_4g124740 | 31.402 | 328 | 190 | 10 | 198 | 516 | 38 | 339 | 4.13e-41 | 151 |
| MsG0180004746.01.T01 | MTR_5g012600 | 30.696 | 316 | 192 | 8 | 215 | 519 | 63 | 362 | 8.02e-40 | 148 |
| MsG0180004746.01.T01 | MTR_1g033050 | 32.979 | 282 | 165 | 7 | 216 | 489 | 19 | 284 | 1.86e-39 | 146 |
| MsG0180004746.01.T01 | MTR_5g088300 | 31.250 | 304 | 183 | 8 | 215 | 516 | 37 | 316 | 3.41e-37 | 140 |
| MsG0180004746.01.T01 | MTR_6g042690 | 33.099 | 284 | 162 | 8 | 215 | 489 | 39 | 303 | 5.04e-37 | 140 |
| MsG0180004746.01.T01 | MTR_2g033970 | 29.630 | 324 | 199 | 8 | 204 | 518 | 45 | 348 | 6.78e-36 | 137 |
| MsG0180004746.01.T01 | MTR_2g073390 | 30.000 | 340 | 199 | 10 | 196 | 516 | 42 | 361 | 1.30e-35 | 137 |
| MsG0180004746.01.T01 | MTR_5g088280 | 30.323 | 310 | 190 | 8 | 211 | 518 | 35 | 320 | 2.25e-35 | 135 |
| MsG0180004746.01.T01 | MTR_4g074290 | 29.155 | 343 | 212 | 9 | 189 | 516 | 35 | 361 | 2.86e-35 | 135 |
| MsG0180004746.01.T01 | MTR_5g088290 | 30.263 | 304 | 187 | 7 | 215 | 516 | 48 | 328 | 2.19e-33 | 130 |
| MsG0180004746.01.T01 | MTR_4g051810 | 30.592 | 304 | 188 | 7 | 215 | 517 | 37 | 318 | 7.37e-33 | 128 |
| MsG0180004746.01.T01 | MTR_0009s0350 | 28.994 | 338 | 207 | 9 | 195 | 516 | 41 | 361 | 2.47e-32 | 127 |
| MsG0180004746.01.T01 | MTR_0009s0340 | 28.994 | 338 | 207 | 9 | 195 | 516 | 41 | 361 | 2.47e-32 | 127 |
| MsG0180004746.01.T01 | MTR_2g436600 | 28.308 | 325 | 193 | 10 | 204 | 518 | 44 | 338 | 8.49e-30 | 120 |
| MsG0180004746.01.T01 | MTR_8g036225 | 29.577 | 284 | 173 | 8 | 215 | 489 | 33 | 298 | 1.90e-28 | 116 |
| MsG0180004746.01.T01 | MTR_6g025590 | 37.126 | 167 | 96 | 5 | 217 | 375 | 51 | 216 | 6.92e-25 | 103 |
| MsG0180004746.01.T01 | MTR_0408s0030 | 40.594 | 101 | 50 | 2 | 389 | 489 | 33 | 123 | 6.38e-18 | 81.3 |
| MsG0180004746.01.T01 | MTR_4g130790 | 32.143 | 196 | 117 | 6 | 213 | 397 | 20 | 210 | 1.23e-17 | 83.6 |
| MsG0180004746.01.T01 | MTR_6g024200 | 38.400 | 125 | 65 | 3 | 392 | 516 | 164 | 276 | 3.86e-16 | 79.3 |
| MsG0180004746.01.T01 | MTR_2g436070 | 34.118 | 170 | 96 | 4 | 132 | 287 | 154 | 321 | 3.86e-16 | 80.5 |
| MsG0180004746.01.T01 | MTR_7g102570 | 32.743 | 113 | 63 | 3 | 375 | 485 | 3 | 104 | 1.48e-11 | 62.0 |
| MsG0180004746.01.T01 | MTR_7g102580 | 40.698 | 86 | 41 | 3 | 290 | 370 | 73 | 153 | 2.15e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004746.01.T01 | AT5G51490 | 55.556 | 504 | 209 | 7 | 35 | 527 | 37 | 536 | 0.0 | 581 |
| MsG0180004746.01.T01 | AT5G51500 | 55.490 | 510 | 212 | 10 | 29 | 527 | 35 | 540 | 0.0 | 580 |
| MsG0180004746.01.T01 | AT3G47400 | 55.019 | 518 | 216 | 8 | 26 | 527 | 78 | 594 | 0.0 | 574 |
| MsG0180004746.01.T01 | AT2G45220 | 49.231 | 520 | 248 | 10 | 9 | 527 | 7 | 511 | 1.34e-172 | 497 |
| MsG0180004746.01.T01 | AT4G00190 | 45.030 | 493 | 244 | 9 | 36 | 527 | 8 | 474 | 3.78e-140 | 413 |
| MsG0180004746.01.T01 | AT1G23200 | 42.617 | 535 | 246 | 12 | 36 | 527 | 38 | 554 | 2.06e-134 | 401 |
| MsG0180004746.01.T01 | AT1G11580 | 46.957 | 460 | 229 | 7 | 73 | 523 | 100 | 553 | 5.67e-134 | 400 |
| MsG0180004746.01.T01 | AT1G11580 | 46.957 | 460 | 229 | 7 | 73 | 523 | 121 | 574 | 1.01e-133 | 400 |
| MsG0180004746.01.T01 | AT5G53370 | 46.460 | 452 | 217 | 7 | 97 | 527 | 138 | 585 | 1.38e-131 | 395 |
| MsG0180004746.01.T01 | AT5G53370 | 46.460 | 452 | 217 | 7 | 97 | 527 | 174 | 621 | 6.26e-131 | 395 |
| MsG0180004746.01.T01 | AT3G60730 | 42.828 | 495 | 237 | 9 | 68 | 527 | 36 | 519 | 2.32e-129 | 387 |
| MsG0180004746.01.T01 | AT4G02320 | 45.414 | 447 | 215 | 7 | 102 | 527 | 80 | 518 | 2.73e-127 | 382 |
| MsG0180004746.01.T01 | AT3G14310 | 45.781 | 474 | 211 | 8 | 96 | 527 | 123 | 592 | 1.96e-126 | 382 |
| MsG0180004746.01.T01 | AT4G02300 | 44.671 | 441 | 225 | 8 | 102 | 527 | 96 | 532 | 3.06e-125 | 377 |
| MsG0180004746.01.T01 | AT3G43270 | 44.619 | 446 | 224 | 7 | 102 | 527 | 83 | 525 | 9.50e-125 | 375 |
| MsG0180004746.01.T01 | AT3G59010 | 46.939 | 441 | 203 | 8 | 102 | 527 | 104 | 528 | 1.21e-124 | 375 |
| MsG0180004746.01.T01 | AT1G02810 | 38.475 | 577 | 286 | 12 | 10 | 527 | 11 | 577 | 3.55e-124 | 376 |
| MsG0180004746.01.T01 | AT4G02330 | 39.825 | 570 | 287 | 14 | 8 | 527 | 8 | 571 | 4.24e-124 | 375 |
| MsG0180004746.01.T01 | AT1G53830 | 45.652 | 460 | 212 | 8 | 102 | 527 | 132 | 587 | 2.52e-123 | 374 |
| MsG0180004746.01.T01 | AT5G04960 | 41.473 | 516 | 269 | 13 | 27 | 525 | 63 | 562 | 4.32e-123 | 372 |
| MsG0180004746.01.T01 | AT3G49220 | 44.248 | 452 | 225 | 8 | 97 | 527 | 151 | 596 | 1.41e-122 | 372 |
| MsG0180004746.01.T01 | AT4G33220 | 42.888 | 457 | 226 | 7 | 102 | 527 | 71 | 523 | 2.82e-122 | 369 |
| MsG0180004746.01.T01 | AT3G49220 | 44.248 | 452 | 225 | 8 | 97 | 527 | 196 | 641 | 5.44e-122 | 372 |
| MsG0180004746.01.T01 | AT5G20860 | 38.686 | 548 | 305 | 14 | 1 | 527 | 1 | 538 | 2.40e-121 | 367 |
| MsG0180004746.01.T01 | AT4G33220 | 51.156 | 346 | 166 | 3 | 182 | 527 | 60 | 402 | 2.44e-121 | 362 |
| MsG0180004746.01.T01 | AT2G43050 | 45.538 | 437 | 207 | 9 | 102 | 527 | 100 | 516 | 8.61e-120 | 362 |
| MsG0180004746.01.T01 | AT2G26440 | 38.941 | 529 | 282 | 12 | 27 | 527 | 32 | 547 | 1.08e-116 | 355 |
| MsG0180004746.01.T01 | AT3G05620 | 45.926 | 405 | 197 | 8 | 132 | 527 | 150 | 541 | 3.68e-116 | 354 |
| MsG0180004746.01.T01 | AT3G10710 | 37.814 | 558 | 294 | 13 | 1 | 527 | 26 | 561 | 5.73e-116 | 354 |
| MsG0180004746.01.T01 | AT2G47550 | 52.537 | 335 | 152 | 4 | 198 | 527 | 226 | 558 | 4.78e-115 | 352 |
| MsG0180004746.01.T01 | AT2G26450 | 39.457 | 479 | 271 | 8 | 58 | 527 | 143 | 611 | 7.73e-114 | 350 |
| MsG0180004746.01.T01 | AT5G49180 | 40.851 | 470 | 251 | 9 | 78 | 523 | 100 | 566 | 2.63e-113 | 347 |
| MsG0180004746.01.T01 | AT3G05610 | 38.160 | 511 | 290 | 10 | 36 | 527 | 62 | 565 | 1.25e-110 | 343 |
| MsG0180004746.01.T01 | AT5G27870 | 39.248 | 479 | 269 | 9 | 68 | 527 | 87 | 562 | 1.10e-109 | 343 |
| MsG0180004746.01.T01 | AT4G33230 | 36.812 | 527 | 287 | 11 | 32 | 527 | 95 | 606 | 1.10e-109 | 339 |
| MsG0180004746.01.T01 | AT3G27980 | 44.638 | 401 | 206 | 9 | 134 | 527 | 106 | 497 | 8.58e-109 | 333 |
| MsG0180004746.01.T01 | AT3G10720 | 37.616 | 537 | 286 | 10 | 36 | 527 | 83 | 615 | 1.87e-108 | 337 |
| MsG0180004746.01.T01 | AT1G11590 | 42.529 | 435 | 230 | 10 | 105 | 527 | 98 | 524 | 4.80e-108 | 332 |
| MsG0180004746.01.T01 | AT4G03930 | 40.385 | 468 | 240 | 11 | 70 | 527 | 86 | 524 | 1.28e-107 | 331 |
| MsG0180004746.01.T01 | AT3G06830 | 37.832 | 489 | 270 | 11 | 68 | 525 | 81 | 566 | 1.38e-106 | 330 |
| MsG0180004746.01.T01 | AT5G04970 | 36.245 | 538 | 292 | 10 | 36 | 527 | 88 | 620 | 2.57e-105 | 328 |
| MsG0180004746.01.T01 | AT1G53840 | 35.294 | 527 | 292 | 11 | 29 | 521 | 70 | 581 | 1.00e-99 | 313 |
| MsG0180004746.01.T01 | AT3G10720 | 55.556 | 261 | 114 | 2 | 267 | 527 | 1 | 259 | 2.33e-99 | 301 |
| MsG0180004746.01.T01 | AT5G20860 | 35.294 | 527 | 282 | 13 | 1 | 506 | 1 | 489 | 9.80e-99 | 308 |
| MsG0180004746.01.T01 | AT3G14300 | 36.832 | 524 | 278 | 11 | 24 | 512 | 448 | 953 | 1.15e-97 | 317 |
| MsG0180004746.01.T01 | AT4G15980 | 43.056 | 360 | 197 | 6 | 171 | 525 | 344 | 700 | 1.88e-93 | 300 |
| MsG0180004746.01.T01 | AT4G15980 | 43.056 | 360 | 197 | 6 | 171 | 525 | 354 | 710 | 3.27e-93 | 299 |
| MsG0180004746.01.T01 | AT5G09760 | 48.495 | 299 | 140 | 5 | 209 | 494 | 235 | 532 | 3.34e-85 | 274 |
| MsG0180004746.01.T01 | AT5G09760 | 48.495 | 299 | 140 | 5 | 209 | 494 | 261 | 558 | 6.02e-85 | 274 |
| MsG0180004746.01.T01 | AT1G11370 | 49.393 | 247 | 124 | 1 | 212 | 458 | 43 | 288 | 2.05e-82 | 258 |
| MsG0180004746.01.T01 | AT5G64640 | 43.731 | 327 | 160 | 7 | 209 | 519 | 283 | 601 | 3.44e-81 | 265 |
| MsG0180004746.01.T01 | AT2G47030 | 39.045 | 356 | 199 | 6 | 186 | 527 | 237 | 588 | 4.83e-74 | 246 |
| MsG0180004746.01.T01 | AT2G47040 | 38.244 | 353 | 203 | 6 | 186 | 527 | 247 | 595 | 1.86e-72 | 242 |
| MsG0180004746.01.T01 | AT3G62170 | 37.432 | 366 | 199 | 8 | 186 | 527 | 229 | 588 | 9.08e-69 | 232 |
| MsG0180004746.01.T01 | AT2G36710 | 33.542 | 319 | 189 | 8 | 212 | 521 | 86 | 390 | 5.38e-50 | 177 |
| MsG0180004746.01.T01 | AT2G36700 | 34.202 | 307 | 182 | 7 | 215 | 516 | 42 | 333 | 9.97e-50 | 174 |
| MsG0180004746.01.T01 | AT2G21610 | 33.333 | 303 | 180 | 7 | 215 | 516 | 51 | 332 | 1.30e-49 | 174 |
| MsG0180004746.01.T01 | AT2G21610 | 33.333 | 303 | 180 | 7 | 215 | 516 | 56 | 337 | 1.56e-49 | 174 |
| MsG0180004746.01.T01 | AT5G19730 | 31.215 | 362 | 204 | 11 | 178 | 516 | 42 | 381 | 3.95e-49 | 174 |
| MsG0180004746.01.T01 | AT3G29090 | 33.333 | 285 | 163 | 6 | 217 | 489 | 9 | 278 | 2.93e-48 | 170 |
| MsG0180004746.01.T01 | AT1G05310 | 32.698 | 315 | 182 | 7 | 215 | 516 | 91 | 388 | 3.70e-44 | 161 |
| MsG0180004746.01.T01 | AT3G17060 | 31.269 | 323 | 191 | 8 | 204 | 516 | 35 | 336 | 3.60e-42 | 154 |
| MsG0180004746.01.T01 | AT5G07430 | 29.972 | 357 | 215 | 10 | 174 | 516 | 20 | 355 | 9.29e-41 | 151 |
| MsG0180004746.01.T01 | AT5G47500 | 29.936 | 314 | 193 | 7 | 215 | 517 | 61 | 358 | 3.35e-39 | 147 |
| MsG0180004746.01.T01 | AT1G44980 | 41.799 | 189 | 106 | 3 | 194 | 379 | 54 | 241 | 1.14e-38 | 142 |
| MsG0180004746.01.T01 | AT5G55590 | 33.333 | 318 | 183 | 10 | 211 | 516 | 78 | 378 | 1.34e-37 | 142 |
| MsG0180004746.01.T01 | AT5G07420 | 29.738 | 343 | 208 | 10 | 189 | 516 | 31 | 355 | 6.32e-37 | 140 |
| MsG0180004746.01.T01 | AT5G55590 | 32.653 | 294 | 165 | 8 | 186 | 459 | 45 | 325 | 1.46e-36 | 139 |
| MsG0180004746.01.T01 | AT3G24130 | 31.119 | 286 | 171 | 7 | 215 | 489 | 34 | 304 | 2.57e-36 | 138 |
| MsG0180004746.01.T01 | AT5G61680 | 28.986 | 345 | 207 | 12 | 190 | 516 | 34 | 358 | 9.34e-33 | 129 |
| MsG0180004746.01.T01 | AT5G18990 | 29.568 | 301 | 175 | 9 | 204 | 489 | 21 | 299 | 1.29e-32 | 127 |
| MsG0180004746.01.T01 | AT5G26810 | 29.252 | 294 | 170 | 8 | 215 | 489 | 34 | 308 | 2.47e-31 | 124 |
| MsG0180004746.01.T01 | AT5G07410 | 28.657 | 335 | 207 | 11 | 196 | 516 | 39 | 355 | 5.19e-31 | 124 |
| MsG0180004746.01.T01 | AT1G69940 | 28.657 | 335 | 207 | 11 | 196 | 516 | 39 | 355 | 5.66e-31 | 124 |
| MsG0180004746.01.T01 | AT2G19150 | 26.807 | 332 | 203 | 10 | 207 | 523 | 33 | 339 | 2.82e-29 | 118 |
| MsG0180004746.01.T01 | AT2G19150 | 28.195 | 266 | 159 | 7 | 207 | 459 | 33 | 279 | 4.33e-27 | 111 |
| MsG0180004746.01.T01 | AT2G47280 | 26.370 | 292 | 183 | 8 | 211 | 489 | 31 | 303 | 8.03e-26 | 108 |
| MsG0180004746.01.T01 | AT3G49220 | 29.730 | 222 | 130 | 7 | 97 | 297 | 196 | 412 | 1.98e-22 | 100 |
Find 100 sgRNAs with CRISPR-Local
Find 154 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCCACAATTGTCAAATTA+AGG | 0.206451 | 1:-82055123 | MsG0180004746.01.T01:CDS |
| TCATGCATTGAAAACCAATT+TGG | 0.214818 | 1:+82056276 | None:intergenic |
| CTTCTACCGGTGTGCTATAT+CGG | 0.231966 | 1:-82055348 | MsG0180004746.01.T01:CDS |
| ACTTCTAGAACTTGTTATTA+TGG | 0.232263 | 1:+82056029 | None:intergenic |
| ACGGTTGCTGGACTCCTTGC+TGG | 0.264051 | 1:-82054831 | MsG0180004746.01.T01:CDS |
| GCTCAAGACACATTGTATTA+TGG | 0.265395 | 1:-82054951 | MsG0180004746.01.T01:CDS |
| TGTGAGGACCAGCAGTATTT+TGG | 0.265892 | 1:+82055414 | None:intergenic |
| AAGAAGGGTCATTTCCAAAT+TGG | 0.272902 | 1:-82056290 | MsG0180004746.01.T01:CDS |
| TGATAAGTACAAAACCTTCT+TGG | 0.297993 | 1:-82055075 | MsG0180004746.01.T01:CDS |
| GCATCAAAGTTTACGGTTGC+TGG | 0.302438 | 1:-82054843 | MsG0180004746.01.T01:CDS |
| GGAATGAAATTCCAGTGTTT+TGG | 0.313831 | 1:+82055141 | None:intergenic |
| TCAAACATAGAGTTGAATTC+AGG | 0.324256 | 1:-82057103 | MsG0180004746.01.T01:CDS |
| TATGGAGAGTATGAGAATTA+TGG | 0.325330 | 1:-82054933 | MsG0180004746.01.T01:CDS |
| GAACGAAGCATCAAAGTTTA+CGG | 0.332018 | 1:-82054850 | MsG0180004746.01.T01:CDS |
| GATCAAAGACCAGATGTAAA+TGG | 0.333623 | 1:+82054780 | None:intergenic |
| GAATGGGTCGCCACGACCTT+GGG | 0.357342 | 1:+82055163 | None:intergenic |
| TTTCAAGAAATGCATATTGA+TGG | 0.359546 | 1:+82056749 | None:intergenic |
| CAACAGCAAATAGAGTAAAA+TGG | 0.362307 | 1:-82054899 | MsG0180004746.01.T01:CDS |
| GGCACCGTAGACTTCATCTT+TGG | 0.365133 | 1:-82055263 | MsG0180004746.01.T01:CDS |
| CATCTCAACCGTACACTTGA+AGG | 0.367169 | 1:-82056939 | MsG0180004746.01.T01:CDS |
| GATAAGTACAAAACCTTCTT+GGG | 0.374659 | 1:-82055074 | MsG0180004746.01.T01:CDS |
| TACCGACAATGCTTCATCTA+TGG | 0.380171 | 1:-82055284 | MsG0180004746.01.T01:CDS |
| GGAATGGGTCGCCACGACCT+TGG | 0.392562 | 1:+82055162 | None:intergenic |
| AATTGAAATATGGCAATCAT+TGG | 0.415279 | 1:-82057284 | None:intergenic |
| GTAAACTTTGATGCTTCGTT+CGG | 0.415593 | 1:+82054852 | None:intergenic |
| TAAACTTTGATGCTTCGTTC+GGG | 0.415901 | 1:+82054853 | None:intergenic |
| CAGCCTTAATTTGACAATTG+TGG | 0.424328 | 1:+82055120 | None:intergenic |
| TCCGTGCATAAAACGGTTCA+TGG | 0.440471 | 1:-82056996 | MsG0180004746.01.T01:CDS |
| AGCCATGTTTGTACATCATT+TGG | 0.450556 | 1:+82056888 | None:intergenic |
| TTCTACCGGTGTGCTATATC+GGG | 0.452629 | 1:-82055347 | MsG0180004746.01.T01:CDS |
| CCAATGTTACTGAGATGATA+AGG | 0.461078 | 1:-82056782 | MsG0180004746.01.T01:CDS |
| TGTGTTGTGTATTGTTTGCA+TGG | 0.464751 | 1:+82057146 | None:intergenic |
| AATCTTGTGGTGGCAAAAGA+TGG | 0.472687 | 1:-82056216 | MsG0180004746.01.T01:CDS |
| GTGTATTGTTTGCATGGCTT+AGG | 0.472890 | 1:+82057152 | None:intergenic |
| TTCAGTTAAGTTCAATCTTG+TGG | 0.474332 | 1:-82056229 | MsG0180004746.01.T01:CDS |
| CTTCCTCAAGCAACATAGAT+TGG | 0.484124 | 1:-82057196 | MsG0180004746.01.T01:CDS |
| GGGCAGTGATCATGTTAGCT+TGG | 0.487370 | 1:+82055183 | None:intergenic |
| ACAAGTTCTAGAAGTGTTCA+AGG | 0.492055 | 1:-82056021 | MsG0180004746.01.T01:CDS |
| TGCCATAGATGAAGCATTGT+CGG | 0.497633 | 1:+82055282 | None:intergenic |
| CCTTATCATCTCAGTAACAT+TGG | 0.498974 | 1:+82056782 | None:intergenic |
| CAGATCTCTCTGTCTTCTAC+CGG | 0.498986 | 1:-82055361 | MsG0180004746.01.T01:CDS |
| TTTGTGATACATGTTAAGAA+AGG | 0.500212 | 1:-82056126 | MsG0180004746.01.T01:CDS |
| AAACTCATCCGTGCATAAAA+CGG | 0.500247 | 1:-82057003 | MsG0180004746.01.T01:CDS |
| CAAACATAGAGTTGAATTCA+GGG | 0.504754 | 1:-82057102 | MsG0180004746.01.T01:CDS |
| ACTACTGTGCCATTTACATC+TGG | 0.505247 | 1:-82054789 | MsG0180004746.01.T01:CDS |
| TCAATAGCCTCATCAAGAAA+AGG | 0.505321 | 1:-82057221 | MsG0180004746.01.T01:CDS |
| CTATTTGCTGTTGATGAACC+AGG | 0.508404 | 1:+82054909 | None:intergenic |
| AATGACAACATTATGCTGAT+TGG | 0.509190 | 1:-82056069 | MsG0180004746.01.T01:CDS |
| AATATCGAAACATGTAAAAG+TGG | 0.509586 | 1:-82056849 | MsG0180004746.01.T01:CDS |
| TATTTAAGCCTTCAAGTGTA+CGG | 0.516272 | 1:+82056931 | None:intergenic |
| TGTTTGCATGGCTTAGGATG+TGG | 0.520012 | 1:+82057158 | None:intergenic |
| ACTCTTGAGTATTGTTGCCA+TGG | 0.524355 | 1:+82055047 | None:intergenic |
| TTACTTACAGAAACAGAAGA+AGG | 0.526714 | 1:-82056306 | MsG0180004746.01.T01:intron |
| ATGATCACTGCCCAAGGTCG+TGG | 0.528622 | 1:-82055173 | MsG0180004746.01.T01:CDS |
| TTGCCATGGCCTGCCCAAGA+AGG | 0.533733 | 1:+82055061 | None:intergenic |
| CAGAGAGATCTGAGGCTGAT+CGG | 0.534495 | 1:+82055372 | None:intergenic |
| ACCCCATGGAGACCAACCTA+GGG | 0.538985 | 1:+82054986 | None:intergenic |
| TGCTGTTGCAGAGCTATAAG+TGG | 0.543731 | 1:+82055990 | None:intergenic |
| GCAAATAGAGTAAAATGGCC+TGG | 0.544601 | 1:-82054894 | MsG0180004746.01.T01:CDS |
| GTGGTGGCAAAAGATGGTTC+TGG | 0.550327 | 1:-82056210 | MsG0180004746.01.T01:CDS |
| TTTGCAAGAAAGCCTTTGGA+TGG | 0.551261 | 1:-82055206 | MsG0180004746.01.T01:CDS |
| CAATCTATGTTGCTTGAGGA+AGG | 0.551632 | 1:+82057197 | None:intergenic |
| AAACCTTCTTGGGCAGGCCA+TGG | 0.552962 | 1:-82055064 | MsG0180004746.01.T01:CDS |
| AGTACAAAACCTTCTTGGGC+AGG | 0.555197 | 1:-82055070 | MsG0180004746.01.T01:CDS |
| ACTTATAGCTCTGCAACAGC+AGG | 0.557059 | 1:-82055988 | MsG0180004746.01.T01:intron |
| ATAACCTTCCAAAATACTGC+TGG | 0.563934 | 1:-82055422 | MsG0180004746.01.T01:CDS |
| CATCTTTGGCAACGCTGCAG+TGG | 0.565515 | 1:-82055249 | MsG0180004746.01.T01:CDS |
| CCTCAAGCAACATAGATTGG+TGG | 0.569379 | 1:-82057193 | MsG0180004746.01.T01:CDS |
| AACATTATGCTGATTGGTGA+CGG | 0.581662 | 1:-82056063 | MsG0180004746.01.T01:CDS |
| ATGTTAGCTTGGCCATCCAA+AGG | 0.583281 | 1:+82055194 | None:intergenic |
| CCTTGCTGGACCAACATGGT+TGG | 0.591137 | 1:-82054817 | MsG0180004746.01.T01:CDS |
| CACCAAATGATGTACAAACA+TGG | 0.597110 | 1:-82056890 | MsG0180004746.01.T01:CDS |
| GGCGACCCATTCCAAAACAC+TGG | 0.597129 | 1:-82055152 | MsG0180004746.01.T01:CDS |
| AGTTAAGTTCAATCTTGTGG+TGG | 0.599486 | 1:-82056226 | MsG0180004746.01.T01:CDS |
| CACCCCATGGAGACCAACCT+AGG | 0.600934 | 1:+82054985 | None:intergenic |
| CCACCAATCTATGTTGCTTG+AGG | 0.601277 | 1:+82057193 | None:intergenic |
| CTAAGAGAAAATATAAGACA+AGG | 0.604478 | 1:-82056149 | MsG0180004746.01.T01:CDS |
| GCAAAATCAGTGTCACCCCA+TGG | 0.619580 | 1:+82054972 | None:intergenic |
| GTTGCCAAAGATGAAGTCTA+CGG | 0.622853 | 1:+82055259 | None:intergenic |
| GACTCCTTGCTGGACCAACA+TGG | 0.624472 | 1:-82054821 | MsG0180004746.01.T01:CDS |
| TTTGTTATCACATGATAACC+AGG | 0.625622 | 1:+82054876 | None:intergenic |
| GCCACAGCTTGACCTTTGTG+AGG | 0.625981 | 1:+82055398 | None:intergenic |
| CCAACCATGTTGGTCCAGCA+AGG | 0.628774 | 1:+82054817 | None:intergenic |
| GGGCTATCAAGACACTCTGA+TGG | 0.632395 | 1:-82055327 | MsG0180004746.01.T01:CDS |
| TGTTTATAAAGAGAACATTG+AGG | 0.633315 | 1:-82056103 | MsG0180004746.01.T01:CDS |
| GTAGAAGACAGAGAGATCTG+AGG | 0.638257 | 1:+82055364 | None:intergenic |
| AATACTGCTGGTCCTCACAA+AGG | 0.646774 | 1:-82055410 | MsG0180004746.01.T01:CDS |
| GCAACAATACTCAAGAGTCA+TGG | 0.646964 | 1:-82055042 | MsG0180004746.01.T01:CDS |
| CCCCTAGGTTGGTCTCCATG+GGG | 0.648245 | 1:-82054987 | MsG0180004746.01.T01:CDS |
| TCCTCACAAAGGTCAAGCTG+TGG | 0.651499 | 1:-82055399 | MsG0180004746.01.T01:CDS |
| GCTAACATGATCACTGCCCA+AGG | 0.651878 | 1:-82055179 | MsG0180004746.01.T01:CDS |
| GAGTATGAGAATTATGGACC+TGG | 0.657686 | 1:-82054927 | MsG0180004746.01.T01:CDS |
| CATTTCTTGAAACATAACAA+AGG | 0.664591 | 1:-82056738 | MsG0180004746.01.T01:intron |
| TACTTACAGAAACAGAAGAA+GGG | 0.668757 | 1:-82056305 | MsG0180004746.01.T01:intron |
| GTAGTGCTAGCCAACCATGT+TGG | 0.672951 | 1:+82054807 | None:intergenic |
| CCCCATGGAGACCAACCTAG+GGG | 0.685055 | 1:+82054987 | None:intergenic |
| CCCATGGAGACCAACCTAGG+GGG | 0.713906 | 1:+82054988 | None:intergenic |
| AGTTCTAGAAGTGTTCAAGG+TGG | 0.726357 | 1:-82056018 | MsG0180004746.01.T01:CDS |
| GATAGCCCGATATAGCACAC+CGG | 0.756970 | 1:+82055342 | None:intergenic |
| TGTGCAAGCTGCTTTAAACG+CGG | 0.768476 | 1:-82056175 | MsG0180004746.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATCATTAACTAATAATT+TGG | + | Chr1:82055636-82055655 | None:intergenic | 10.0% |
| !! | TATAACTATACATATTTATA+TGG | + | Chr1:82055694-82055713 | None:intergenic | 10.0% |
| !!! | ATTGAATAACTTTATTTATA+AGG | - | Chr1:82055403-82055422 | MsG0180004746.01.T01:CDS | 10.0% |
| !! | ATAAATTATCGAATGTTAAT+AGG | - | Chr1:82055485-82055504 | MsG0180004746.01.T01:intron | 15.0% |
| !! | ATGTATAGTTATAACTTATA+TGG | - | Chr1:82055701-82055720 | MsG0180004746.01.T01:intron | 15.0% |
| !! | TAAATTATCGAATGTTAATA+GGG | - | Chr1:82055486-82055505 | MsG0180004746.01.T01:intron | 15.0% |
| !! | TAAATTATCGAATGTTTATT+TGG | - | Chr1:82055448-82055467 | MsG0180004746.01.T01:CDS | 15.0% |
| !! | TTAGTTAATGATAATATTGA+TGG | - | Chr1:82055641-82055660 | MsG0180004746.01.T01:intron | 15.0% |
| !!! | AGTATATATCTTCAATTTTT+AGG | - | Chr1:82055584-82055603 | MsG0180004746.01.T01:intron | 15.0% |
| !!! | AGTTATTCAATAATTTTTAG+TGG | + | Chr1:82055394-82055413 | None:intergenic | 15.0% |
| !!! | TTTAAACACTGATTTAATTA+GGG | + | Chr1:82056378-82056397 | None:intergenic | 15.0% |
| !!! | TTTTAAACACTGATTTAATT+AGG | + | Chr1:82056379-82056398 | None:intergenic | 15.0% |
| !! | GGAAAAAAAAGTTGTAAAAT+AGG | - | Chr1:82055522-82055541 | MsG0180004746.01.T01:intron | 20.0% |
| !! | TATTTATAAGGAATGAAATG+CGG | - | Chr1:82055415-82055434 | MsG0180004746.01.T01:CDS | 20.0% |
| !! | TTATAACAAGAACATAAAAC+AGG | + | Chr1:82056112-82056131 | None:intergenic | 20.0% |
| !!! | TTGCAAAAATGTTACAATTT+TGG | + | Chr1:82056838-82056857 | None:intergenic | 20.0% |
| ! | AATATCGAAACATGTAAAAG+TGG | - | Chr1:82055208-82055227 | MsG0180004746.01.T01:CDS | 25.0% |
| ! | ATTCCACAATTGTCAAATTA+AGG | - | Chr1:82056934-82056953 | MsG0180004746.01.T01:CDS | 25.0% |
| ! | ATTTATAAGGAATGAAATGC+GGG | - | Chr1:82055416-82055435 | MsG0180004746.01.T01:CDS | 25.0% |
| ! | CATTTCTTGAAACATAACAA+AGG | - | Chr1:82055319-82055338 | MsG0180004746.01.T01:CDS | 25.0% |
| ! | CTAAATCAGTGAAGAAAATT+TGG | + | Chr1:82056228-82056247 | None:intergenic | 25.0% |
| ! | CTAAGAGAAAATATAAGACA+AGG | - | Chr1:82055908-82055927 | MsG0180004746.01.T01:intron | 25.0% |
| ! | TGTTTATAAAGAGAACATTG+AGG | - | Chr1:82055954-82055973 | MsG0180004746.01.T01:intron | 25.0% |
| ! | TTCTTGCAACTTATATAGTA+AGG | - | Chr1:82056468-82056487 | MsG0180004746.01.T01:intron | 25.0% |
| ! | TTTCAAGAAATGCATATTGA+TGG | + | Chr1:82055311-82055330 | None:intergenic | 25.0% |
| ! | TTTGTGATACATGTTAAGAA+AGG | - | Chr1:82055931-82055950 | MsG0180004746.01.T01:intron | 25.0% |
| !! | GTGTTTAAAATTATTTGCCA+CGG | - | Chr1:82056389-82056408 | MsG0180004746.01.T01:intron | 25.0% |
| !!! | ACTTCTAGAACTTGTTATTA+TGG | + | Chr1:82056031-82056050 | None:intergenic | 25.0% |
| !!! | TCACTGATTTAGTTTTTTCT+AGG | - | Chr1:82056236-82056255 | MsG0180004746.01.T01:CDS | 25.0% |
| AAAATTATTTGCCACGGAAA+TGG | - | Chr1:82056395-82056414 | MsG0180004746.01.T01:intron | 30.0% | |
| AATGACAACATTATGCTGAT+TGG | - | Chr1:82055988-82056007 | MsG0180004746.01.T01:intron | 30.0% | |
| AGTTGTAAAATAGGAAGACA+CGG | - | Chr1:82055531-82055550 | MsG0180004746.01.T01:intron | 30.0% | |
| CAAACATAGAGTTGAATTCA+GGG | - | Chr1:82054955-82054974 | MsG0180004746.01.T01:CDS | 30.0% | |
| CAACAGCAAATAGAGTAAAA+TGG | - | Chr1:82057158-82057177 | MsG0180004746.01.T01:CDS | 30.0% | |
| CATCTTTCATGTTCAATAGT+AGG | + | Chr1:82056291-82056310 | None:intergenic | 30.0% | |
| CTATAAATCACAATCGTTGT+TGG | + | Chr1:82056541-82056560 | None:intergenic | 30.0% | |
| GATAAGTACAAAACCTTCTT+GGG | - | Chr1:82056983-82057002 | MsG0180004746.01.T01:CDS | 30.0% | |
| TACTTACAGAAACAGAAGAA+GGG | - | Chr1:82055752-82055771 | MsG0180004746.01.T01:intron | 30.0% | |
| TATTTAAGCCTTCAAGTGTA+CGG | + | Chr1:82055129-82055148 | None:intergenic | 30.0% | |
| TCAAACATAGAGTTGAATTC+AGG | - | Chr1:82054954-82054973 | MsG0180004746.01.T01:CDS | 30.0% | |
| TCATGCATTGAAAACCAATT+TGG | + | Chr1:82055784-82055803 | None:intergenic | 30.0% | |
| TGATAAGTACAAAACCTTCT+TGG | - | Chr1:82056982-82057001 | MsG0180004746.01.T01:CDS | 30.0% | |
| TGATATTCATAGTCGTCTAA+TGG | - | Chr1:82056443-82056462 | MsG0180004746.01.T01:intron | 30.0% | |
| TTACTTACAGAAACAGAAGA+AGG | - | Chr1:82055751-82055770 | MsG0180004746.01.T01:intron | 30.0% | |
| TTCAGTTAAGTTCAATCTTG+TGG | - | Chr1:82055828-82055847 | MsG0180004746.01.T01:intron | 30.0% | |
| ! | CTCTTGAATCTTTTAAATCC+AGG | - | Chr1:82056581-82056600 | MsG0180004746.01.T01:intron | 30.0% |
| ! | GTTTTGTACTTATCAACAAC+AGG | + | Chr1:82056977-82056996 | None:intergenic | 30.0% |
| ! | TATGGAGAGTATGAGAATTA+TGG | - | Chr1:82057124-82057143 | MsG0180004746.01.T01:CDS | 30.0% |
| ! | TTTGTTATCACATGATAACC+AGG | + | Chr1:82057184-82057203 | None:intergenic | 30.0% |
| !! | CATGGTGATGAAAACTTTTA+TGG | - | Chr1:82057033-82057052 | MsG0180004746.01.T01:CDS | 30.0% |
| !!! | AAATTCCAGTGTTTTGGAAT+GGG | + | Chr1:82056913-82056932 | None:intergenic | 30.0% |
| !!! | ATTGGTTTTCAATGCATGAA+AGG | - | Chr1:82055785-82055804 | MsG0180004746.01.T01:intron | 30.0% |
| AAACTCATCCGTGCATAAAA+CGG | - | Chr1:82055054-82055073 | MsG0180004746.01.T01:CDS | 35.0% | |
| AAGAAGGGTCATTTCCAAAT+TGG | - | Chr1:82055767-82055786 | MsG0180004746.01.T01:intron | 35.0% | |
| AGCCATGTTTGTACATCATT+TGG | + | Chr1:82055172-82055191 | None:intergenic | 35.0% | |
| AGTTAAGTTCAATCTTGTGG+TGG | - | Chr1:82055831-82055850 | MsG0180004746.01.T01:intron | 35.0% | |
| ATAACCTTCCAAAATACTGC+TGG | - | Chr1:82056635-82056654 | MsG0180004746.01.T01:intron | 35.0% | |
| ATGGTGCTCTTATATATCAG+AGG | - | Chr1:82056414-82056433 | MsG0180004746.01.T01:intron | 35.0% | |
| CACCAAATGATGTACAAACA+TGG | - | Chr1:82055167-82055186 | MsG0180004746.01.T01:CDS | 35.0% | |
| CCAATGTTACTGAGATGATA+AGG | - | Chr1:82055275-82055294 | MsG0180004746.01.T01:CDS | 35.0% | |
| CCTTATCATCTCAGTAACAT+TGG | + | Chr1:82055278-82055297 | None:intergenic | 35.0% | |
| GCTCAAGACACATTGTATTA+TGG | - | Chr1:82057106-82057125 | MsG0180004746.01.T01:CDS | 35.0% | |
| GTAAACTTTGATGCTTCGTT+CGG | + | Chr1:82057208-82057227 | None:intergenic | 35.0% | |
| GTCATGCTAATATAAGCTTC+TGG | - | Chr1:82055723-82055742 | MsG0180004746.01.T01:intron | 35.0% | |
| GTTGAACTAACAACGAAAGT+TGG | - | Chr1:82056150-82056169 | MsG0180004746.01.T01:CDS | 35.0% | |
| GTTGTAAAATAGGAAGACAC+GGG | - | Chr1:82055532-82055551 | MsG0180004746.01.T01:intron | 35.0% | |
| TAAACTTTGATGCTTCGTTC+GGG | + | Chr1:82057207-82057226 | None:intergenic | 35.0% | |
| TAATAGGGTTGAACATGAAG+AGG | - | Chr1:82055501-82055520 | MsG0180004746.01.T01:intron | 35.0% | |
| TATTGAACATGAAAGATGCG+CGG | - | Chr1:82056293-82056312 | MsG0180004746.01.T01:CDS | 35.0% | |
| TCAATAGCCTCATCAAGAAA+AGG | - | Chr1:82054836-82054855 | MsG0180004746.01.T01:CDS | 35.0% | |
| TGTGTTGTGTATTGTTTGCA+TGG | + | Chr1:82054914-82054933 | None:intergenic | 35.0% | |
| ! | AACATTATGCTGATTGGTGA+CGG | - | Chr1:82055994-82056013 | MsG0180004746.01.T01:CDS | 35.0% |
| ! | CAGCCTTAATTTGACAATTG+TGG | + | Chr1:82056940-82056959 | None:intergenic | 35.0% |
| ! | CATGGTAAGAGCTTCTTTTA+AGG | + | Chr1:82054999-82055018 | None:intergenic | 35.0% |
| ! | CATTTTTGCAAGAAAGCCTT+TGG | - | Chr1:82056847-82056866 | MsG0180004746.01.T01:CDS | 35.0% |
| ! | GAACGAAGCATCAAAGTTTA+CGG | - | Chr1:82057207-82057226 | MsG0180004746.01.T01:CDS | 35.0% |
| ! | GGAATGAAATTCCAGTGTTT+TGG | + | Chr1:82056919-82056938 | None:intergenic | 35.0% |
| ! | TTCTTGTGCTTCTTTTTGCA+TGG | + | Chr1:82055017-82055036 | None:intergenic | 35.0% |
| !! | ACAAGTTCTAGAAGTGTTCA+AGG | - | Chr1:82056036-82056055 | MsG0180004746.01.T01:CDS | 35.0% |
| !!! | CTTTTAAATCCAGGCATTGA+TGG | - | Chr1:82056590-82056609 | MsG0180004746.01.T01:intron | 35.0% |
| !!! | GAAATTCCAGTGTTTTGGAA+TGG | + | Chr1:82056914-82056933 | None:intergenic | 35.0% |
| AAATGAAGTCCATCAATGCC+TGG | + | Chr1:82056602-82056621 | None:intergenic | 40.0% | |
| AATCTTGTGGTGGCAAAAGA+TGG | - | Chr1:82055841-82055860 | MsG0180004746.01.T01:intron | 40.0% | |
| CTTCCTCAAGCAACATAGAT+TGG | - | Chr1:82054861-82054880 | MsG0180004746.01.T01:CDS | 40.0% | |
| GAGTATGAGAATTATGGACC+TGG | - | Chr1:82057130-82057149 | MsG0180004746.01.T01:CDS | 40.0% | |
| GCAAATAGAGTAAAATGGCC+TGG | - | Chr1:82057163-82057182 | MsG0180004746.01.T01:CDS | 40.0% | |
| GCAACAATACTCAAGAGTCA+TGG | - | Chr1:82057015-82057034 | MsG0180004746.01.T01:CDS | 40.0% | |
| GTGTATTGTTTGCATGGCTT+AGG | + | Chr1:82054908-82054927 | None:intergenic | 40.0% | |
| GTTGCCAAAGATGAAGTCTA+CGG | + | Chr1:82056801-82056820 | None:intergenic | 40.0% | |
| TACCGACAATGCTTCATCTA+TGG | - | Chr1:82056773-82056792 | MsG0180004746.01.T01:CDS | 40.0% | |
| TGTTGGACAATGACACATGT+TGG | + | Chr1:82056524-82056543 | None:intergenic | 40.0% | |
| TTTGCAAGAAAGCCTTTGGA+TGG | - | Chr1:82056851-82056870 | MsG0180004746.01.T01:CDS | 40.0% | |
| ! | ACCATGAACCGTTTTATGCA+CGG | + | Chr1:82055065-82055084 | None:intergenic | 40.0% |
| ! | ACTCTTGAGTATTGTTGCCA+TGG | + | Chr1:82057013-82057032 | None:intergenic | 40.0% |
| ! | CAATCTATGTTGCTTGAGGA+AGG | + | Chr1:82054863-82054882 | None:intergenic | 40.0% |
| ! | GTAAGGACGCTTTAGATTGA+AGG | - | Chr1:82056485-82056504 | MsG0180004746.01.T01:intron | 40.0% |
| !! | ACTACTGTGCCATTTACATC+TGG | - | Chr1:82057268-82057287 | MsG0180004746.01.T01:CDS | 40.0% |
| !! | AGTTCTAGAAGTGTTCAAGG+TGG | - | Chr1:82056039-82056058 | MsG0180004746.01.T01:CDS | 40.0% |
| !! | ATATAAGAGCACCATTTCCG+TGG | + | Chr1:82056409-82056428 | None:intergenic | 40.0% |
| !! | CTATTTGCTGTTGATGAACC+AGG | + | Chr1:82057151-82057170 | None:intergenic | 40.0% |
| !! | TGCCATAGATGAAGCATTGT+CGG | + | Chr1:82056778-82056797 | None:intergenic | 40.0% |
| AATACTGCTGGTCCTCACAA+AGG | - | Chr1:82056647-82056666 | MsG0180004746.01.T01:intron | 45.0% | |
| AGTACAAAACCTTCTTGGGC+AGG | - | Chr1:82056987-82057006 | MsG0180004746.01.T01:CDS | 45.0% | |
| CAGATCTCTCTGTCTTCTAC+CGG | - | Chr1:82056696-82056715 | MsG0180004746.01.T01:intron | 45.0% | |
| CATCTCAACCGTACACTTGA+AGG | - | Chr1:82055118-82055137 | MsG0180004746.01.T01:CDS | 45.0% | |
| CCTCAAGCAACATAGATTGG+TGG | - | Chr1:82054864-82054883 | MsG0180004746.01.T01:CDS | 45.0% | |
| CTTCTACCGGTGTGCTATAT+CGG | - | Chr1:82056709-82056728 | MsG0180004746.01.T01:intron | 45.0% | |
| GCATCAAAGTTTACGGTTGC+TGG | - | Chr1:82057214-82057233 | MsG0180004746.01.T01:CDS | 45.0% | |
| GTAGAAGACAGAGAGATCTG+AGG | + | Chr1:82056696-82056715 | None:intergenic | 45.0% | |
| TCCGTGCATAAAACGGTTCA+TGG | - | Chr1:82055061-82055080 | MsG0180004746.01.T01:CDS | 45.0% | |
| TGCTGTTGCAGAGCTATAAG+TGG | + | Chr1:82056070-82056089 | None:intergenic | 45.0% | |
| TGTTTGCATGGCTTAGGATG+TGG | + | Chr1:82054902-82054921 | None:intergenic | 45.0% | |
| TTCTACCGGTGTGCTATATC+GGG | - | Chr1:82056710-82056729 | MsG0180004746.01.T01:intron | 45.0% | |
| ! | ACTTATAGCTCTGCAACAGC+AGG | - | Chr1:82056069-82056088 | MsG0180004746.01.T01:CDS | 45.0% |
| ! | ATGTTAGCTTGGCCATCCAA+AGG | + | Chr1:82056866-82056885 | None:intergenic | 45.0% |
| ! | CCACCAATCTATGTTGCTTG+AGG | + | Chr1:82054867-82054886 | None:intergenic | 45.0% |
| ! | GGAAGGTCCTTTTCTTGATG+AGG | + | Chr1:82054846-82054865 | None:intergenic | 45.0% |
| ! | TGTGAGGACCAGCAGTATTT+TGG | + | Chr1:82056646-82056665 | None:intergenic | 45.0% |
| ! | TGTGCAAGCTGCTTTAAACG+CGG | - | Chr1:82055882-82055901 | MsG0180004746.01.T01:intron | 45.0% |
| !! | AGGACCAGCAGTATTTTGGA+AGG | + | Chr1:82056642-82056661 | None:intergenic | 45.0% |
| AAGTTGGCGACTCTAGTAGG+CGG | - | Chr1:82056166-82056185 | MsG0180004746.01.T01:CDS | 50.0% | |
| CGAAAGTTGGCGACTCTAGT+AGG | - | Chr1:82056163-82056182 | MsG0180004746.01.T01:CDS | 50.0% | |
| GATAGCCCGATATAGCACAC+CGG | + | Chr1:82056718-82056737 | None:intergenic | 50.0% | |
| GCAAAATCAGTGTCACCCCA+TGG | + | Chr1:82057088-82057107 | None:intergenic | 50.0% | |
| GCTAACATGATCACTGCCCA+AGG | - | Chr1:82056878-82056897 | MsG0180004746.01.T01:CDS | 50.0% | |
| GGCACCGTAGACTTCATCTT+TGG | - | Chr1:82056794-82056813 | MsG0180004746.01.T01:CDS | 50.0% | |
| GGGCAGTGATCATGTTAGCT+TGG | + | Chr1:82056877-82056896 | None:intergenic | 50.0% | |
| GGGCTATCAAGACACTCTGA+TGG | - | Chr1:82056730-82056749 | MsG0180004746.01.T01:intron | 50.0% | |
| GTAGTGCTAGCCAACCATGT+TGG | + | Chr1:82057253-82057272 | None:intergenic | 50.0% | |
| GTGGTGGCAAAAGATGGTTC+TGG | - | Chr1:82055847-82055866 | MsG0180004746.01.T01:intron | 50.0% | |
| TCCTCACAAAGGTCAAGCTG+TGG | - | Chr1:82056658-82056677 | MsG0180004746.01.T01:intron | 50.0% | |
| ! | CAGAGAGATCTGAGGCTGAT+CGG | + | Chr1:82056688-82056707 | None:intergenic | 50.0% |
| AAACCTTCTTGGGCAGGCCA+TGG | - | Chr1:82056993-82057012 | MsG0180004746.01.T01:CDS | 55.0% | |
| ACCCCATGGAGACCAACCTA+GGG | + | Chr1:82057074-82057093 | None:intergenic | 55.0% | |
| ATGATCACTGCCCAAGGTCG+TGG | - | Chr1:82056884-82056903 | MsG0180004746.01.T01:CDS | 55.0% | |
| CATCTTTGGCAACGCTGCAG+TGG | - | Chr1:82056808-82056827 | MsG0180004746.01.T01:CDS | 55.0% | |
| CCAACCATGTTGGTCCAGCA+AGG | + | Chr1:82057243-82057262 | None:intergenic | 55.0% | |
| CCTTGCTGGACCAACATGGT+TGG | - | Chr1:82057240-82057259 | MsG0180004746.01.T01:CDS | 55.0% | |
| CTTTAGTGAGCCCCCTAGGT+TGG | - | Chr1:82057059-82057078 | MsG0180004746.01.T01:CDS | 55.0% | |
| GACACTTTAGTGAGCCCCCT+AGG | - | Chr1:82057055-82057074 | MsG0180004746.01.T01:CDS | 55.0% | |
| GACTCCTTGCTGGACCAACA+TGG | - | Chr1:82057236-82057255 | MsG0180004746.01.T01:CDS | 55.0% | |
| GCCACAGCTTGACCTTTGTG+AGG | + | Chr1:82056662-82056681 | None:intergenic | 55.0% | |
| GGCGACCCATTCCAAAACAC+TGG | - | Chr1:82056905-82056924 | MsG0180004746.01.T01:CDS | 55.0% | |
| ACGGTTGCTGGACTCCTTGC+TGG | - | Chr1:82057226-82057245 | MsG0180004746.01.T01:CDS | 60.0% | |
| CACCCCATGGAGACCAACCT+AGG | + | Chr1:82057075-82057094 | None:intergenic | 60.0% | |
| CCCATGGAGACCAACCTAGG+GGG | + | Chr1:82057072-82057091 | None:intergenic | 60.0% | |
| CCCCATGGAGACCAACCTAG+GGG | + | Chr1:82057073-82057092 | None:intergenic | 60.0% | |
| GAATGGGTCGCCACGACCTT+GGG | + | Chr1:82056897-82056916 | None:intergenic | 60.0% | |
| GCGACTCTAGTAGGCGGAGA+TGG | - | Chr1:82056172-82056191 | MsG0180004746.01.T01:CDS | 60.0% | |
| TTGCCATGGCCTGCCCAAGA+AGG | + | Chr1:82056999-82057018 | None:intergenic | 60.0% | |
| !! | CCCCCTAGGTTGGTCTCCAT+GGG | - | Chr1:82057069-82057088 | MsG0180004746.01.T01:CDS | 60.0% |
| !! | CCCCTAGGTTGGTCTCCATG+GGG | - | Chr1:82057070-82057089 | MsG0180004746.01.T01:CDS | 60.0% |
| GGAATGGGTCGCCACGACCT+TGG | + | Chr1:82056898-82056917 | None:intergenic | 65.0% | |
| !! | GCCCCCTAGGTTGGTCTCCA+TGG | - | Chr1:82057068-82057087 | MsG0180004746.01.T01:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 82054782 | 82057297 | 82054782 | ID=MsG0180004746.01;Name=MsG0180004746.01 |
| Chr1 | mRNA | 82054782 | 82057297 | 82054782 | ID=MsG0180004746.01.T01;Parent=MsG0180004746.01;Name=MsG0180004746.01.T01;_AED=0.50;_eAED=0.50;_QI=0|0|0|1|1|1|3|0|527 |
| Chr1 | exon | 82056739 | 82057297 | 82056739 | ID=MsG0180004746.01.T01:exon:34795;Parent=MsG0180004746.01.T01 |
| Chr1 | exon | 82055989 | 82056318 | 82055989 | ID=MsG0180004746.01.T01:exon:34794;Parent=MsG0180004746.01.T01 |
| Chr1 | exon | 82054782 | 82055476 | 82054782 | ID=MsG0180004746.01.T01:exon:34793;Parent=MsG0180004746.01.T01 |
| Chr1 | CDS | 82056739 | 82057297 | 82056739 | ID=MsG0180004746.01.T01:cds;Parent=MsG0180004746.01.T01 |
| Chr1 | CDS | 82055989 | 82056318 | 82055989 | ID=MsG0180004746.01.T01:cds;Parent=MsG0180004746.01.T01 |
| Chr1 | CDS | 82054782 | 82055476 | 82054782 | ID=MsG0180004746.01.T01:cds;Parent=MsG0180004746.01.T01 |
| Gene Sequence |
| Protein sequence |
