AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480019215.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480019215.01.T01 MTR_4g025690 97.546 489 12 0 1 489 25 513 0.0 997
MsG0480019215.01.T01 MTR_4g025730 74.949 491 114 5 1 489 26 509 0.0 761
MsG0480019215.01.T01 MTR_8g104655 50.584 514 220 10 5 489 33 541 3.72e-180 516
MsG0480019215.01.T01 MTR_3g033690 53.493 501 212 10 4 489 32 526 1.19e-179 514
MsG0480019215.01.T01 MTR_3g008640 53.386 502 212 11 4 489 32 527 3.75e-178 510
MsG0480019215.01.T01 MTR_4g035980 51.485 505 225 9 4 489 36 539 4.43e-178 511
MsG0480019215.01.T01 MTR_3g008720 53.386 502 212 11 4 489 32 527 6.98e-178 509
MsG0480019215.01.T01 MTR_7g053360 53.386 502 212 11 4 489 32 527 2.03e-177 508
MsG0480019215.01.T01 MTR_3g008700 52.778 504 216 11 2 489 30 527 2.31e-176 506
MsG0480019215.01.T01 MTR_7g108905 53.499 443 180 8 69 485 110 552 1.96e-160 466
MsG0480019215.01.T01 MTR_8g104645 62.059 340 120 4 159 489 33 372 4.29e-155 446
MsG0480019215.01.T01 MTR_4g025670 53.052 426 181 8 72 484 65 484 7.27e-154 447
MsG0480019215.01.T01 MTR_4g087980 51.242 443 191 6 66 489 80 516 8.96e-153 445
MsG0480019215.01.T01 MTR_8g104580 45.224 513 216 11 5 489 25 500 8.65e-152 442
MsG0480019215.01.T01 MTR_8g023310 45.992 524 243 10 4 489 68 589 3.71e-148 436
MsG0480019215.01.T01 MTR_1g008140 43.726 526 248 10 8 489 86 607 2.35e-147 435
MsG0480019215.01.T01 MTR_2g044880 50.112 447 203 5 61 489 81 525 2.41e-147 432
MsG0480019215.01.T01 MTR_7g050980 47.656 512 230 13 6 489 54 555 8.00e-147 431
MsG0480019215.01.T01 MTR_7g050870 51.902 447 191 9 63 489 112 554 1.58e-145 428
MsG0480019215.01.T01 MTR_1g083520 48.622 508 216 13 8 485 32 524 4.18e-145 426
MsG0480019215.01.T01 MTR_3g091380 44.168 523 244 10 8 489 82 597 7.36e-145 428
MsG0480019215.01.T01 MTR_1g088020 47.940 534 216 17 8 489 32 555 2.59e-141 417
MsG0480019215.01.T01 MTR_7g112580 48.904 456 188 10 66 489 100 542 1.89e-138 410
MsG0480019215.01.T01 MTR_1g088225 47.753 534 215 18 8 489 32 553 4.43e-138 409
MsG0480019215.01.T01 MTR_7g108890 46.328 531 228 15 8 489 40 562 1.28e-137 408
MsG0480019215.01.T01 MTR_1g054880 49.892 465 184 12 72 489 96 558 7.43e-137 406
MsG0480019215.01.T01 MTR_7g050950 49.220 449 199 10 63 489 112 553 2.52e-136 405
MsG0480019215.01.T01 MTR_7g108900 46.346 520 221 15 25 489 44 560 1.22e-135 403
MsG0480019215.01.T01 MTR_4g087970 46.067 445 213 5 67 489 78 517 3.24e-133 395
MsG0480019215.01.T01 MTR_7g108875 44.090 533 237 13 8 489 42 564 5.92e-132 394
MsG0480019215.01.T01 MTR_8g042910 46.784 513 209 14 32 489 109 612 2.11e-131 394
MsG0480019215.01.T01 MTR_8g042900 45.436 482 227 12 37 489 107 581 2.81e-131 392
MsG0480019215.01.T01 MTR_3g010780 43.827 486 233 11 34 489 99 574 2.45e-127 382
MsG0480019215.01.T01 MTR_2g044810 42.000 500 268 9 1 485 38 530 4.06e-124 373
MsG0480019215.01.T01 MTR_4g124550 42.412 514 257 12 4 484 81 588 1.00e-123 374
MsG0480019215.01.T01 MTR_0458s0030 65.399 263 89 2 228 489 53 314 6.53e-123 362
MsG0480019215.01.T01 MTR_1g088040 65.399 263 89 2 228 489 53 314 6.53e-123 362
MsG0480019215.01.T01 MTR_3g010770 57.325 314 127 4 182 489 263 575 1.43e-121 367
MsG0480019215.01.T01 MTR_8g023150 42.054 516 259 12 4 489 77 582 4.73e-120 364
MsG0480019215.01.T01 MTR_4g124520 47.030 404 188 10 100 485 122 517 1.09e-119 361
MsG0480019215.01.T01 MTR_0618s0020 67.544 228 73 1 263 489 1 228 5.71e-116 341
MsG0480019215.01.T01 MTR_1g086190 39.836 487 253 11 37 485 75 559 2.57e-110 338
MsG0480019215.01.T01 MTR_1g086210 42.317 423 205 8 101 485 144 565 9.41e-110 337
MsG0480019215.01.T01 MTR_8g093460 38.996 518 267 14 2 483 41 545 7.02e-104 322
MsG0480019215.01.T01 MTR_2g044660 48.632 329 161 5 159 484 304 627 1.35e-102 320
MsG0480019215.01.T01 MTR_3g095920 39.265 517 267 14 1 478 45 553 5.36e-102 317
MsG0480019215.01.T01 MTR_1g083510 38.200 500 257 14 37 487 85 581 2.85e-100 313
MsG0480019215.01.T01 MTR_7g110490 39.316 468 227 12 70 484 106 569 5.31e-100 312
MsG0480019215.01.T01 MTR_7g110510 39.316 468 227 12 70 484 106 569 5.31e-100 312
MsG0480019215.01.T01 MTR_7g112590 36.905 504 263 13 32 486 83 580 1.84e-99 311
MsG0480019215.01.T01 MTR_7g110440 37.607 468 235 10 70 484 106 569 2.85e-99 310
MsG0480019215.01.T01 MTR_7g110560 38.936 470 251 11 48 485 80 545 1.32e-98 308
MsG0480019215.01.T01 MTR_1g083470 37.662 462 233 11 66 485 118 566 2.87e-97 305
MsG0480019215.01.T01 MTR_1g083500 37.662 462 233 11 66 485 118 566 2.87e-97 305
MsG0480019215.01.T01 MTR_1g083490 37.281 456 251 11 66 489 123 575 2.90e-95 300
MsG0480019215.01.T01 MTR_4g005170 37.832 452 246 11 66 485 123 571 3.23e-95 301
MsG0480019215.01.T01 MTR_4g005180 37.013 462 236 12 66 485 105 553 2.65e-93 294
MsG0480019215.01.T01 MTR_2g044810 53.846 247 112 2 240 485 216 461 2.32e-92 289
MsG0480019215.01.T01 MTR_2g436040 33.136 507 309 10 4 486 43 543 2.92e-92 293
MsG0480019215.01.T01 MTR_4g120290 36.660 521 280 16 4 485 59 568 7.88e-92 291
MsG0480019215.01.T01 MTR_4g120280 33.776 527 289 11 4 486 59 569 1.52e-90 288
MsG0480019215.01.T01 MTR_8g088610 43.976 332 177 7 161 486 45 373 2.44e-90 281
MsG0480019215.01.T01 MTR_2g436050 36.170 470 268 11 48 486 93 561 2.39e-87 279
MsG0480019215.01.T01 MTR_5g083620 41.716 338 181 7 159 485 20 352 1.67e-85 268
MsG0480019215.01.T01 MTR_7g110420 36.059 477 244 12 70 489 106 578 1.67e-85 275
MsG0480019215.01.T01 MTR_0458s0010 39.212 533 227 20 8 489 32 518 3.08e-85 272
MsG0480019215.01.T01 MTR_7g110430 32.976 467 224 10 70 484 106 535 4.97e-79 256
MsG0480019215.01.T01 MTR_2g105560 40.385 312 171 5 181 489 40 339 1.18e-73 236
MsG0480019215.01.T01 MTR_7g107180 40.317 315 175 5 178 489 3 307 2.03e-72 232
MsG0480019215.01.T01 MTR_6g024165 39.875 321 168 8 169 478 28 334 2.83e-67 219
MsG0480019215.01.T01 MTR_2g039530 42.574 303 157 6 158 455 28 318 8.18e-64 211
MsG0480019215.01.T01 MTR_7g111560 30.099 505 314 16 8 487 64 554 1.30e-62 213
MsG0480019215.01.T01 MTR_1g086540 36.646 322 178 6 169 478 37 344 3.19e-57 193
MsG0480019215.01.T01 MTR_8g102380 38.158 304 159 6 190 478 88 377 2.44e-55 189
MsG0480019215.01.T01 MTR_6g088810 39.145 304 154 7 190 478 90 377 8.41e-55 188
MsG0480019215.01.T01 MTR_6g012800 34.663 326 178 9 182 487 6 316 5.67e-53 181
MsG0480019215.01.T01 MTR_6g042660 35.764 288 157 7 171 451 30 296 9.08e-49 171
MsG0480019215.01.T01 MTR_7g011530 33.230 322 184 8 184 487 8 316 3.31e-47 166
MsG0480019215.01.T01 MTR_7g092780 32.132 333 195 7 159 478 73 387 4.24e-47 168
MsG0480019215.01.T01 MTR_8g102380 40.726 248 121 6 190 422 88 324 5.27e-47 166
MsG0480019215.01.T01 MTR_5g083590 32.143 308 155 5 182 485 7 264 2.92e-46 162
MsG0480019215.01.T01 MTR_5g095490 33.876 307 171 6 188 478 67 357 7.29e-45 161
MsG0480019215.01.T01 MTR_6g042690 34.507 284 153 8 182 451 39 303 8.63e-44 157
MsG0480019215.01.T01 MTR_4g124740 34.091 308 170 7 182 478 54 339 1.66e-43 157
MsG0480019215.01.T01 MTR_2g033970 32.390 318 191 6 172 480 46 348 4.39e-43 156
MsG0480019215.01.T01 MTR_7g102600 32.459 305 184 6 184 478 101 393 1.03e-42 156
MsG0480019215.01.T01 MTR_1g033050 32.982 285 168 5 177 451 13 284 1.76e-42 153
MsG0480019215.01.T01 MTR_5g012600 31.529 314 187 7 182 481 63 362 1.65e-40 149
MsG0480019215.01.T01 MTR_5g088300 32.215 298 183 5 182 478 37 316 7.12e-39 144
MsG0480019215.01.T01 MTR_5g093970 33.115 305 178 9 182 478 43 329 1.09e-38 144
MsG0480019215.01.T01 MTR_2g436600 31.348 319 184 9 172 480 45 338 2.05e-37 140
MsG0480019215.01.T01 MTR_2g073390 30.247 324 203 8 169 483 58 367 3.28e-37 140
MsG0480019215.01.T01 MTR_4g074290 31.193 327 196 9 169 483 58 367 6.62e-36 137
MsG0480019215.01.T01 MTR_5g088280 31.229 301 188 5 179 478 36 318 1.31e-35 135
MsG0480019215.01.T01 MTR_4g051810 32.441 299 182 6 182 478 37 317 1.53e-35 135
MsG0480019215.01.T01 MTR_5g088290 31.229 301 183 7 182 478 48 328 2.48e-34 132
MsG0480019215.01.T01 MTR_0009s0350 28.834 326 205 8 169 483 58 367 2.93e-32 127
MsG0480019215.01.T01 MTR_0009s0340 28.834 326 205 8 169 483 58 367 2.93e-32 127
MsG0480019215.01.T01 MTR_8g036225 27.302 315 200 6 182 486 33 328 4.61e-30 120
MsG0480019215.01.T01 MTR_6g025590 38.122 181 102 3 169 339 36 216 1.83e-29 116
MsG0480019215.01.T01 MTR_2g436070 28.315 279 156 10 4 251 56 321 2.81e-20 92.8
MsG0480019215.01.T01 MTR_4g130790 28.112 249 147 8 185 420 25 254 7.67e-16 77.8
MsG0480019215.01.T01 MTR_0408s0030 40.404 99 46 3 355 451 36 123 1.00e-15 74.7
MsG0480019215.01.T01 MTR_6g024200 34.375 160 84 5 320 478 137 276 2.40e-15 76.6
MsG0480019215.01.T01 MTR_7g102580 40.659 91 44 2 249 334 68 153 2.75e-12 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480019215.01.T01 AT2G45220 67.213 488 154 4 3 489 29 511 0.0 699
MsG0480019215.01.T01 AT5G51490 51.389 504 220 9 7 489 37 536 2.57e-178 511
MsG0480019215.01.T01 AT5G51500 50.797 502 226 9 7 489 41 540 2.90e-173 498
MsG0480019215.01.T01 AT3G47400 49.414 512 234 9 3 489 83 594 3.29e-172 498
MsG0480019215.01.T01 AT4G00190 53.388 487 202 9 8 489 8 474 1.23e-171 492
MsG0480019215.01.T01 AT1G23200 47.925 530 215 13 8 489 38 554 3.67e-154 450
MsG0480019215.01.T01 AT3G43270 48.857 481 214 8 39 489 47 525 3.00e-147 432
MsG0480019215.01.T01 AT3G49220 44.990 509 250 8 8 489 91 596 1.61e-145 430
MsG0480019215.01.T01 AT3G49220 44.990 509 250 8 8 489 136 641 9.35e-145 429
MsG0480019215.01.T01 AT3G60730 47.629 464 201 8 62 487 58 517 3.03e-144 424
MsG0480019215.01.T01 AT3G14310 48.504 468 192 8 68 486 122 589 2.14e-143 424
MsG0480019215.01.T01 AT5G53370 43.836 511 254 8 8 489 79 585 2.63e-143 424
MsG0480019215.01.T01 AT3G59010 49.260 473 208 8 39 489 66 528 4.75e-143 421
MsG0480019215.01.T01 AT5G53370 43.836 511 254 8 8 489 115 621 6.80e-143 424
MsG0480019215.01.T01 AT1G53830 48.596 463 197 7 68 489 125 587 3.40e-141 418
MsG0480019215.01.T01 AT1G11580 50.114 439 195 7 68 485 118 553 4.63e-140 414
MsG0480019215.01.T01 AT4G02320 47.253 455 213 10 60 489 66 518 5.77e-140 413
MsG0480019215.01.T01 AT1G11580 50.114 439 195 7 68 485 139 574 1.40e-139 414
MsG0480019215.01.T01 AT4G33220 46.121 464 208 6 66 489 62 523 3.52e-137 406
MsG0480019215.01.T01 AT4G33220 56.627 332 141 2 161 489 71 402 1.00e-134 395
MsG0480019215.01.T01 AT3G05620 49.231 455 187 11 67 489 99 541 1.12e-134 400
MsG0480019215.01.T01 AT4G02330 43.670 545 236 18 8 489 35 571 4.33e-129 387
MsG0480019215.01.T01 AT2G43050 48.611 432 190 10 75 489 100 516 8.77e-129 384
MsG0480019215.01.T01 AT4G02300 45.393 445 211 10 69 486 90 529 1.90e-127 381
MsG0480019215.01.T01 AT1G02810 42.523 555 237 14 8 489 32 577 4.38e-126 379
MsG0480019215.01.T01 AT2G26450 41.865 504 264 12 4 484 109 606 3.07e-124 375
MsG0480019215.01.T01 AT5G04960 41.683 511 255 13 4 487 68 562 1.82e-123 372
MsG0480019215.01.T01 AT3G10720 42.435 542 243 16 8 489 83 615 3.79e-123 373
MsG0480019215.01.T01 AT2G47550 42.373 531 246 13 8 489 39 558 6.01e-122 368
MsG0480019215.01.T01 AT3G10710 42.495 513 247 13 4 489 70 561 4.14e-121 366
MsG0480019215.01.T01 AT5G20860 40.661 514 271 12 2 489 33 538 9.96e-121 364
MsG0480019215.01.T01 AT1G53840 40.192 520 260 12 4 483 73 581 7.68e-120 363
MsG0480019215.01.T01 AT2G26440 39.922 516 261 12 7 485 40 543 5.98e-118 357
MsG0480019215.01.T01 AT3G05610 41.280 453 234 10 66 489 116 565 3.76e-117 359
MsG0480019215.01.T01 AT5G04970 41.513 542 248 17 8 489 88 620 6.58e-117 357
MsG0480019215.01.T01 AT3G06830 39.630 487 254 11 39 489 86 568 9.07e-117 355
MsG0480019215.01.T01 AT5G49180 41.803 488 246 14 34 485 81 566 1.81e-116 354
MsG0480019215.01.T01 AT5G27870 41.124 445 236 8 66 485 115 558 8.56e-114 352
MsG0480019215.01.T01 AT4G33230 42.795 458 225 11 60 484 148 601 1.23e-113 348
MsG0480019215.01.T01 AT3G10720 60.385 260 101 2 231 489 1 259 9.79e-111 329
MsG0480019215.01.T01 AT3G14300 39.567 508 260 12 8 479 463 959 1.27e-110 350
MsG0480019215.01.T01 AT4G15980 47.564 349 174 5 147 487 353 700 1.30e-106 333
MsG0480019215.01.T01 AT4G15980 47.564 349 174 5 147 487 363 710 2.99e-106 332
MsG0480019215.01.T01 AT3G27980 43.147 394 215 5 103 489 106 497 1.51e-105 324
MsG0480019215.01.T01 AT1G11590 43.250 400 214 5 101 489 127 524 3.43e-102 316
MsG0480019215.01.T01 AT4G03930 42.714 398 215 6 103 489 129 524 8.20e-102 315
MsG0480019215.01.T01 AT5G64640 39.072 517 270 17 3 481 92 601 9.76e-100 312
MsG0480019215.01.T01 AT5G09760 38.641 515 264 17 3 477 44 546 1.70e-97 305
MsG0480019215.01.T01 AT5G20860 37.525 493 246 12 2 468 33 489 2.82e-97 303
MsG0480019215.01.T01 AT5G09760 38.447 515 265 16 3 477 70 572 3.01e-97 305
MsG0480019215.01.T01 AT2G47030 44.540 348 173 6 160 489 243 588 1.72e-85 275
MsG0480019215.01.T01 AT3G62170 41.737 357 180 6 154 484 229 583 6.73e-82 265
MsG0480019215.01.T01 AT2G47040 43.768 345 177 6 160 489 253 595 7.07e-82 265
MsG0480019215.01.T01 AT1G11370 49.398 249 123 2 174 419 38 286 4.59e-81 253
MsG0480019215.01.T01 AT5G19730 37.864 309 165 6 183 478 87 381 1.25e-54 188
MsG0480019215.01.T01 AT3G17060 33.229 319 185 7 172 479 36 337 4.48e-49 172
MsG0480019215.01.T01 AT1G05310 33.934 333 189 8 159 478 74 388 2.66e-48 171
MsG0480019215.01.T01 AT3G29090 35.106 282 161 4 182 451 7 278 3.95e-48 169
MsG0480019215.01.T01 AT2G36700 33.444 302 182 4 184 478 44 333 9.80e-48 168
MsG0480019215.01.T01 AT2G21610 32.890 301 179 7 182 478 51 332 1.24e-45 163
MsG0480019215.01.T01 AT2G21610 32.890 301 179 7 182 478 56 337 1.63e-45 163
MsG0480019215.01.T01 AT5G07430 31.081 370 229 8 119 478 2 355 2.49e-45 162
MsG0480019215.01.T01 AT2G36710 32.372 312 189 7 182 483 91 390 2.67e-44 161
MsG0480019215.01.T01 AT5G55590 33.739 329 190 8 164 478 64 378 2.27e-43 157
MsG0480019215.01.T01 AT5G07420 32.075 318 192 7 169 478 54 355 2.09e-42 154
MsG0480019215.01.T01 AT5G47500 30.699 329 191 7 164 478 52 357 2.70e-42 154
MsG0480019215.01.T01 AT5G18990 33.441 311 177 7 182 478 29 323 4.40e-42 153
MsG0480019215.01.T01 AT2G19150 33.754 317 179 9 182 485 41 339 1.60e-41 152
MsG0480019215.01.T01 AT3G24130 31.348 319 185 8 182 484 34 334 1.19e-40 149
MsG0480019215.01.T01 AT5G55590 35.165 273 152 7 164 422 64 325 2.23e-40 148
MsG0480019215.01.T01 AT1G44980 41.489 188 104 2 162 343 54 241 9.34e-40 144
MsG0480019215.01.T01 AT5G61680 31.329 316 191 8 173 478 59 358 2.96e-39 146
MsG0480019215.01.T01 AT1G69940 29.141 326 206 7 162 478 46 355 5.78e-38 142
MsG0480019215.01.T01 AT5G26810 32.692 312 183 8 182 478 34 333 4.36e-37 139
MsG0480019215.01.T01 AT5G07410 29.141 326 206 7 162 478 46 355 4.51e-37 140
MsG0480019215.01.T01 AT2G47280 32.476 311 178 8 182 478 35 327 8.16e-35 133
MsG0480019215.01.T01 AT2G19150 34.921 252 140 7 182 422 41 279 3.03e-34 130
MsG0480019215.01.T01 AT3G49220 35.780 218 113 6 68 259 194 410 5.03e-33 130

Find 100 sgRNAs with CRISPR-Local

Find 145 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGCAAATATGTTGCAATTT+TGG 0.085785 4:-16291259 None:intergenic
TACAAACAATGCAACATTTA+TGG 0.116630 4:+16291197 MsG0480019215.01.T01:CDS
GATAAGTCTTAACAGAATTT+TGG 0.160141 4:-16291400 None:intergenic
GCATTTCTATTCACAATTCT+AGG 0.200545 4:+16291348 MsG0480019215.01.T01:CDS
TACCTACCTTTGTTATTCTT+TGG 0.232922 4:-16290030 None:intergenic
GCATTAAGTACTTTATATTA+TGG 0.242821 4:+16291524 MsG0480019215.01.T01:CDS
CCAAAGTTTAACTTCGTTCA+TGG 0.261322 4:-16289422 None:intergenic
TGTTGTTGGAGATGGATTTA+TGG 0.279809 4:+16291028 MsG0480019215.01.T01:CDS
TGGCTCAAGATATCACATTT+AGG 0.292215 4:+16291048 MsG0480019215.01.T01:CDS
ACTGTATCAAATTTCATTGC+TGG 0.309927 4:+16291644 MsG0480019215.01.T01:CDS
TTCACGTGAGTTACTACATT+TGG 0.320043 4:-16289608 None:intergenic
GTGATTGTGTTGACTTTGTT+TGG 0.331970 4:-16291290 None:intergenic
TGATTTCTTCAAACTTTCAT+TGG 0.341515 4:+16289531 MsG0480019215.01.T01:CDS
GTAAATGGCACTTTGGTTGC+AGG 0.349440 4:-16291680 None:intergenic
AATTCTGTTAAGACTTATCT+TGG 0.359832 4:+16291404 MsG0480019215.01.T01:CDS
ATCCAGCTGGTTGGTTAGAA+TGG 0.361304 4:+16291489 MsG0480019215.01.T01:CDS
AATTAAAGAGTAGATGTAAA+TGG 0.364262 4:-16291695 None:intergenic
AAGGTTGAGGATTAGGTGTT+TGG 0.366280 4:-16289450 None:intergenic
CAAGCTGTTGCATTGCGTTC+CGG 0.373938 4:+16291095 MsG0480019215.01.T01:CDS
GACCATGGAAGCAATATTCT+AGG 0.374299 4:+16291429 MsG0480019215.01.T01:CDS
CATGCAAACACTCTTTCATT+AGG 0.385373 4:+16289583 MsG0480019215.01.T01:CDS
CAATGAACAAGTTGAGATAA+AGG 0.386142 4:+16290080 MsG0480019215.01.T01:CDS
TTCTAGGGTTACCGCTGCTT+CGG 0.395543 4:+16291364 MsG0480019215.01.T01:CDS
TAGCAATTTAGTAACATTGT+TGG 0.401894 4:-16289824 None:intergenic
CGCTGCTTCGGATTTGAAAC+CGG 0.416213 4:+16291376 MsG0480019215.01.T01:CDS
TACACACAAGGTTGAGGATT+AGG 0.417987 4:-16289457 None:intergenic
GGGAACCCATCTTTGTAGCT+AGG 0.418473 4:-16289886 None:intergenic
AACGCAATGCAACAGCTTGA+TGG 0.429138 4:-16291091 None:intergenic
GAATAGAAATGCCAGTGTTT+TGG 0.434967 4:-16291337 None:intergenic
GCAAAGAATATTATGTTGGT+TGG 0.435785 4:+16290102 MsG0480019215.01.T01:CDS
ATTCTTTGGTATAGCATTCA+CGG 0.447221 4:-16290016 None:intergenic
ACTAACAGTTGTGTACTTCC+CGG 0.449602 4:-16289989 None:intergenic
CATTTCTATTCACAATTCTA+GGG 0.450955 4:+16291349 MsG0480019215.01.T01:CDS
TTTGCAGCTGTTGTTGGAGA+TGG 0.451928 4:+16291020 MsG0480019215.01.T01:intron
CCATGAACGAAGTTAAACTT+TGG 0.454650 4:+16289422 None:intergenic
CACCTGGCCTAACCCATGTT+GGG 0.479286 4:-16289906 None:intergenic
AATATTATGTTGGTTGGAGA+TGG 0.480645 4:+16290108 MsG0480019215.01.T01:CDS
ATGAGTTTGTGTTGGTAAGA+AGG 0.482647 4:-16289496 None:intergenic
AAAGGCAAAGAATATTATGT+TGG 0.483951 4:+16290098 MsG0480019215.01.T01:CDS
CCATTTGACACGGTTTCTTG+TGG 0.485738 4:-16291576 None:intergenic
GAGTATATGAACACTGGTCT+TGG 0.488203 4:+16291548 MsG0480019215.01.T01:CDS
TTGTGTTGACTTTGTTTGGA+GGG 0.490707 4:-16291286 None:intergenic
CAAGAACCTAGCTACAAAGA+TGG 0.493394 4:+16289880 MsG0480019215.01.T01:CDS
TAGTAGCAAAAGACGGGTCC+GGG 0.495277 4:+16289971 MsG0480019215.01.T01:CDS
ATTTCATTGCTGGAAATGCT+TGG 0.496886 4:+16291654 MsG0480019215.01.T01:CDS
TGTAGTAGCTTTCTATCACC+TGG 0.499249 4:-16289922 None:intergenic
GTAGTAGCAAAAGACGGGTC+CGG 0.499299 4:+16289970 MsG0480019215.01.T01:CDS
CCACAAGAAACCGTGTCAAA+TGG 0.501895 4:+16291576 MsG0480019215.01.T01:CDS
AAGAAATACACACAAGGTTG+AGG 0.502901 4:-16289463 None:intergenic
GCCCTAGAATATTGCTTCCA+TGG 0.507314 4:-16291431 None:intergenic
TAAATTGCTAAGTAACACTT+TGG 0.507939 4:+16289837 MsG0480019215.01.T01:CDS
GATAGTTTGATTCATCCAGC+TGG 0.516549 4:+16291476 MsG0480019215.01.T01:CDS
TCACCTGGCCTAACCCATGT+TGG 0.518597 4:-16289907 None:intergenic
TTTGTTTGATGAGTTTGTGT+TGG 0.521126 4:-16289504 None:intergenic
AGTAGATGTAAATGGCACTT+TGG 0.524094 4:-16291687 None:intergenic
ACCGGTAGCAAAAGCGTTGG+AGG 0.524747 4:+16290150 MsG0480019215.01.T01:CDS
AAATACAGACAAGTCTGATC+CGG 0.525381 4:-16291114 None:intergenic
ATGTTGGTTGGAGATGGTAT+TGG 0.525732 4:+16290114 MsG0480019215.01.T01:CDS
AAAGCTGGATTCTATGATCT+TGG 0.527056 4:+16289772 MsG0480019215.01.T01:CDS
TTCCCAACATGGGTTAGGCC+AGG 0.531406 4:+16289904 MsG0480019215.01.T01:CDS
ATGGGTTCCCAACATGGGTT+AGG 0.533950 4:+16289899 MsG0480019215.01.T01:CDS
TGAGTTTGTGTTGGTAAGAA+GGG 0.534506 4:-16289495 None:intergenic
ACAAAGATGGGTTCCCAACA+TGG 0.535204 4:+16289893 MsG0480019215.01.T01:CDS
AGCTTTACATGTCTCAAGGT+TGG 0.546562 4:-16289755 None:intergenic
ACAATGCAACATTTATGGTA+CGG 0.547191 4:+16291202 MsG0480019215.01.T01:CDS
CTCCATTCTAACCAACCAGC+TGG 0.548616 4:-16291491 None:intergenic
AACCTTGAGACATGTAAAGC+TGG 0.551306 4:+16289757 MsG0480019215.01.T01:CDS
AAGAACCTAGCTACAAAGAT+GGG 0.557927 4:+16289881 MsG0480019215.01.T01:CDS
TAGGTATGTTATACATGTGA+AGG 0.561706 4:+16290047 MsG0480019215.01.T01:CDS
CTCAAGTTGATGCTCAAACA+TGG 0.563888 4:+16289716 MsG0480019215.01.T01:CDS
ATCCAGCTTTACATGTCTCA+AGG 0.564983 4:-16289759 None:intergenic
ATTGTGTTGACTTTGTTTGG+AGG 0.571190 4:-16291287 None:intergenic
ACATTCCGTTCTGCCACTGT+TGG 0.587276 4:+16290183 MsG0480019215.01.T01:CDS
GATAACCTTGCCATTTGACA+CGG 0.589011 4:-16291586 None:intergenic
ACGTAGTAGTAGCAAAAGAC+GGG 0.589841 4:+16289965 MsG0480019215.01.T01:CDS
AACGTAGTAGTAGCAAAAGA+CGG 0.590566 4:+16289964 MsG0480019215.01.T01:CDS
GTTTGATTCATCCAGCTGGT+TGG 0.591836 4:+16291480 MsG0480019215.01.T01:CDS
ACCATGGAAGCAATATTCTA+GGG 0.592357 4:+16291430 MsG0480019215.01.T01:CDS
ATTGGTAAAACTGTAATCAC+CGG 0.592601 4:+16290132 MsG0480019215.01.T01:CDS
CTAATGAAAGAGTGTTTGCA+TGG 0.596121 4:-16289582 None:intergenic
AGACTTATCTTGGAAGACCA+TGG 0.599466 4:+16291414 MsG0480019215.01.T01:CDS
ATCACCGGTAGCAAAAGCGT+TGG 0.601310 4:+16290147 MsG0480019215.01.T01:CDS
AGAAACCGTGTCAAATGGCA+AGG 0.607462 4:+16291581 MsG0480019215.01.T01:CDS
TACCAAAGAATAACAAAGGT+AGG 0.608433 4:+16290028 MsG0480019215.01.T01:CDS
GGTAGCAAAAGCGTTGGAGG+AGG 0.610712 4:+16290153 MsG0480019215.01.T01:CDS
ATCACATTTAGGAACACTGC+CGG 0.612058 4:+16291059 MsG0480019215.01.T01:CDS
GTAACATTGTTGGACATGAG+AGG 0.612493 4:-16289814 None:intergenic
CAAAGATGGGTTCCCAACAT+GGG 0.625227 4:+16289894 MsG0480019215.01.T01:CDS
ACAGATCCTAACCAAAACAC+TGG 0.626471 4:+16291326 MsG0480019215.01.T01:CDS
GCTATACCAAAGAATAACAA+AGG 0.633072 4:+16290024 MsG0480019215.01.T01:CDS
TATGGAGAGTATATGAACAC+TGG 0.633586 4:+16291542 MsG0480019215.01.T01:CDS
TATGTTATACATGTGAAGGC+TGG 0.634350 4:+16290051 MsG0480019215.01.T01:CDS
ACTTACCAACAGTGGCAGAA+CGG 0.640460 4:-16290188 None:intergenic
GTTCAAGAAAGAGCACTCAA+AGG 0.644742 4:+16289559 MsG0480019215.01.T01:CDS
GTCAACACAATCACTGCACA+AGG 0.651414 4:+16291299 MsG0480019215.01.T01:CDS
CGGTTTCAAATCCGAAGCAG+CGG 0.662915 4:-16291375 None:intergenic
GCTGGTTGGTTAGAATGGAG+TGG 0.670039 4:+16291494 MsG0480019215.01.T01:CDS
CAGTAACTACTTACCAACAG+TGG 0.681222 4:-16290196 None:intergenic
AGTGGCAGAACGGAATGTTG+TGG 0.699012 4:-16290178 None:intergenic
TTGTTCAAGAAATACACACA+AGG 0.713213 4:-16289469 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTAACATTATTTTTGTTT+TGG - Chr4:16290439-16290458 None:intergenic 10.0%
!! CAATTTATTTAAATTGTTGA+AGG + Chr4:16290817-16290836 MsG0480019215.01.T01:intron 15.0%
!! TATTAATGTTAAAAACTAAG+AGG - Chr4:16290954-16290973 None:intergenic 15.0%
!!! CTTGCAATTTTTTTTTATAT+AGG - Chr4:16290653-16290672 None:intergenic 15.0%
!! GCATTAAGTACTTTATATTA+TGG + Chr4:16291524-16291543 MsG0480019215.01.T01:CDS 20.0%
!!! CTTTTATGTATTTATAGAAC+CGG + Chr4:16290600-16290619 MsG0480019215.01.T01:intron 20.0%
!!! TCTTGCAATTTTTTTGATAT+AGG - Chr4:16290692-16290711 None:intergenic 20.0%
!!! TGAAATGTTGCTTATTATTA+AGG + Chr4:16290260-16290279 MsG0480019215.01.T01:intron 20.0%
!!! TTTGTTCCATTTTTTTAATG+CGG + Chr4:16290761-16290780 MsG0480019215.01.T01:intron 20.0%
!!! TTTTATAGATGTAGTTTTGA+AGG + Chr4:16291134-16291153 MsG0480019215.01.T01:CDS 20.0%
! AAAGGCAAAGAATATTATGT+TGG + Chr4:16290098-16290117 MsG0480019215.01.T01:CDS 25.0%
! AATTCTGTTAAGACTTATCT+TGG + Chr4:16291404-16291423 MsG0480019215.01.T01:CDS 25.0%
! ATTATTAAGGTTGCCAAAAT+CGG + Chr4:16290273-16290292 MsG0480019215.01.T01:intron 25.0%
! CATTTCTATTCACAATTCTA+GGG + Chr4:16291349-16291368 MsG0480019215.01.T01:CDS 25.0%
! GTAAAACCGCATTAAAAAAA+TGG - Chr4:16290770-16290789 None:intergenic 25.0%
! TAAATTGCTAAGTAACACTT+TGG + Chr4:16289837-16289856 MsG0480019215.01.T01:CDS 25.0%
! TACAAACAATGCAACATTTA+TGG + Chr4:16291197-16291216 MsG0480019215.01.T01:CDS 25.0%
! TAGCAATTTAGTAACATTGT+TGG - Chr4:16289827-16289846 None:intergenic 25.0%
! TGATTTCTTCAAACTTTCAT+TGG + Chr4:16289531-16289550 MsG0480019215.01.T01:CDS 25.0%
!! GATAAGTCTTAACAGAATTT+TGG - Chr4:16291403-16291422 None:intergenic 25.0%
!! TTGCAAATATGTTGCAATTT+TGG - Chr4:16291262-16291281 None:intergenic 25.0%
!!! AACACTTTGTTTTAGTATCT+AGG - Chr4:16289696-16289715 None:intergenic 25.0%
!!! ACACTTTGTTTTAGTATCTA+GGG - Chr4:16289695-16289714 None:intergenic 25.0%
!!! CTGAATTTTTGGATTTAAGT+CGG + Chr4:16290859-16290878 MsG0480019215.01.T01:intron 25.0%
!!! TCGATTTTGATTACGATTTT+CGG - Chr4:16290407-16290426 None:intergenic 25.0%
!!! TGAATTTTTGGATTTAAGTC+GGG + Chr4:16290860-16290879 MsG0480019215.01.T01:intron 25.0%
!!! TTTTTTAATGCGGTTTTACT+AGG + Chr4:16290771-16290790 MsG0480019215.01.T01:intron 25.0%
AAATTGCAGAATTCCAAAAC+AGG - Chr4:16290803-16290822 None:intergenic 30.0%
ACAATGCAACATTTATGGTA+CGG + Chr4:16291202-16291221 MsG0480019215.01.T01:CDS 30.0%
ACTGTATCAAATTTCATTGC+TGG + Chr4:16291644-16291663 MsG0480019215.01.T01:CDS 30.0%
ATTCTTTGGTATAGCATTCA+CGG - Chr4:16290019-16290038 None:intergenic 30.0%
ATTGGTAAAACTGTAATCAC+CGG + Chr4:16290132-16290151 MsG0480019215.01.T01:CDS 30.0%
CGACTTAAATCCAAAAATTC+AGG - Chr4:16290861-16290880 None:intergenic 30.0%
GCAAAGAATATTATGTTGGT+TGG + Chr4:16290102-16290121 MsG0480019215.01.T01:CDS 30.0%
GCATTTCTATTCACAATTCT+AGG + Chr4:16291348-16291367 MsG0480019215.01.T01:CDS 30.0%
GCTATACCAAAGAATAACAA+AGG + Chr4:16290024-16290043 MsG0480019215.01.T01:CDS 30.0%
TACCAAAGAATAACAAAGGT+AGG + Chr4:16290028-16290047 MsG0480019215.01.T01:CDS 30.0%
TAGGTATGTTATACATGTGA+AGG + Chr4:16290047-16290066 MsG0480019215.01.T01:CDS 30.0%
TTATTAAGGTTGCCAAAATC+GGG + Chr4:16290274-16290293 MsG0480019215.01.T01:intron 30.0%
TTGTTCAAGAAATACACACA+AGG - Chr4:16289472-16289491 None:intergenic 30.0%
TTTGTTTGATGAGTTTGTGT+TGG - Chr4:16289507-16289526 None:intergenic 30.0%
! AATATTATGTTGGTTGGAGA+TGG + Chr4:16290108-16290127 MsG0480019215.01.T01:CDS 30.0%
! CAATGAACAAGTTGAGATAA+AGG + Chr4:16290080-16290099 MsG0480019215.01.T01:CDS 30.0%
! TAAAATCCTGTGATTTTGCA+TGG + Chr4:16290728-16290747 MsG0480019215.01.T01:intron 30.0%
!! GGTACGGTTGATTTTATATT+TGG + Chr4:16291218-16291237 MsG0480019215.01.T01:CDS 30.0%
!! TACCTACCTTTGTTATTCTT+TGG - Chr4:16290033-16290052 None:intergenic 30.0%
AAAGCTGGATTCTATGATCT+TGG + Chr4:16289772-16289791 MsG0480019215.01.T01:CDS 35.0%
AAATACAGACAAGTCTGATC+CGG - Chr4:16291117-16291136 None:intergenic 35.0%
AACGTAGTAGTAGCAAAAGA+CGG + Chr4:16289964-16289983 MsG0480019215.01.T01:CDS 35.0%
AAGAAATACACACAAGGTTG+AGG - Chr4:16289466-16289485 None:intergenic 35.0%
AAGAACCTAGCTACAAAGAT+GGG + Chr4:16289881-16289900 MsG0480019215.01.T01:CDS 35.0%
ACCATGGAAGCAATATTCTA+GGG + Chr4:16291430-16291449 MsG0480019215.01.T01:CDS 35.0%
AGTAGATGTAAATGGCACTT+TGG - Chr4:16291690-16291709 None:intergenic 35.0%
ATCTAAGCTTCGAGTCATTT+AGG - Chr4:16290525-16290544 None:intergenic 35.0%
ATTTCATTGCTGGAAATGCT+TGG + Chr4:16291654-16291673 MsG0480019215.01.T01:CDS 35.0%
CATGCAAACACTCTTTCATT+AGG + Chr4:16289583-16289602 MsG0480019215.01.T01:CDS 35.0%
GTATTTATAGAACCGGATCA+CGG + Chr4:16290607-16290626 MsG0480019215.01.T01:intron 35.0%
TAAAAGACCAAGTTCTGTCT+AGG - Chr4:16290586-16290605 None:intergenic 35.0%
TAAACAACCTAGACAGAACT+TGG + Chr4:16290576-16290595 MsG0480019215.01.T01:intron 35.0%
TATGTTATACATGTGAAGGC+TGG + Chr4:16290051-16290070 MsG0480019215.01.T01:CDS 35.0%
TATTTATAGAACCGGATCAC+GGG + Chr4:16290608-16290627 MsG0480019215.01.T01:intron 35.0%
TGAAATCCATGCAAAATCAC+AGG - Chr4:16290737-16290756 None:intergenic 35.0%
TGGCTCAAGATATCACATTT+AGG + Chr4:16291048-16291067 MsG0480019215.01.T01:CDS 35.0%
TTCACGTGAGTTACTACATT+TGG - Chr4:16289611-16289630 None:intergenic 35.0%
TTTATATAGGTCAATCGACC+CGG - Chr4:16290640-16290659 None:intergenic 35.0%
! ATGAGTTTGTGTTGGTAAGA+AGG - Chr4:16289499-16289518 None:intergenic 35.0%
! CAAAATCGGGATTTAACTTC+AGG + Chr4:16290287-16290306 MsG0480019215.01.T01:intron 35.0%
! CTGAAGTTAAATCCCGATTT+TGG - Chr4:16290289-16290308 None:intergenic 35.0%
! GAATAGAAATGCCAGTGTTT+TGG - Chr4:16291340-16291359 None:intergenic 35.0%
! GATTTAACTTCAGGTCGAAT+GGG + Chr4:16290296-16290315 MsG0480019215.01.T01:intron 35.0%
! GTCGCAAAATCCTGAATTTT+TGG + Chr4:16290848-16290867 MsG0480019215.01.T01:intron 35.0%
! GTCTTAACAGAATTTTGGAC+CGG - Chr4:16291398-16291417 None:intergenic 35.0%
! TATGGAGAGTATATGAACAC+TGG + Chr4:16291542-16291561 MsG0480019215.01.T01:CDS 35.0%
! TCTTTTGCTACTACTACGTT+AGG - Chr4:16289964-16289983 None:intergenic 35.0%
! TGAGTTTGTGTTGGTAAGAA+GGG - Chr4:16289498-16289517 None:intergenic 35.0%
! TGTTGTTGGAGATGGATTTA+TGG + Chr4:16291028-16291047 MsG0480019215.01.T01:CDS 35.0%
!! ATTGTGTTGACTTTGTTTGG+AGG - Chr4:16291290-16291309 None:intergenic 35.0%
!! CTAATGAAAGAGTGTTTGCA+TGG - Chr4:16289585-16289604 None:intergenic 35.0%
!! GTGATTGTGTTGACTTTGTT+TGG - Chr4:16291293-16291312 None:intergenic 35.0%
!! TTGTGTTGACTTTGTTTGGA+GGG - Chr4:16291289-16291308 None:intergenic 35.0%
AACCTTGAGACATGTAAAGC+TGG + Chr4:16289757-16289776 MsG0480019215.01.T01:CDS 40.0%
AAGGTTGAGGATTAGGTGTT+TGG - Chr4:16289453-16289472 None:intergenic 40.0%
ACAGATCCTAACCAAAACAC+TGG + Chr4:16291326-16291345 MsG0480019215.01.T01:CDS 40.0%
ACGTAGTAGTAGCAAAAGAC+GGG + Chr4:16289965-16289984 MsG0480019215.01.T01:CDS 40.0%
ACTAACAGTTGTGTACTTCC+CGG - Chr4:16289992-16290011 None:intergenic 40.0%
ACTCACGTGAAAAATCAGCT+TGG + Chr4:16289620-16289639 MsG0480019215.01.T01:CDS 40.0%
AGACTTATCTTGGAAGACCA+TGG + Chr4:16291414-16291433 MsG0480019215.01.T01:CDS 40.0%
AGCTTTACATGTCTCAAGGT+TGG - Chr4:16289758-16289777 None:intergenic 40.0%
ATCACATTTAGGAACACTGC+CGG + Chr4:16291059-16291078 MsG0480019215.01.T01:CDS 40.0%
ATCCAGCTTTACATGTCTCA+AGG - Chr4:16289762-16289781 None:intergenic 40.0%
CAAGAACCTAGCTACAAAGA+TGG + Chr4:16289880-16289899 MsG0480019215.01.T01:CDS 40.0%
CAGTAACTACTTACCAACAG+TGG - Chr4:16290199-16290218 None:intergenic 40.0%
CTCACGTGAAAAATCAGCTT+GGG + Chr4:16289621-16289640 MsG0480019215.01.T01:CDS 40.0%
GACCATGGAAGCAATATTCT+AGG + Chr4:16291429-16291448 MsG0480019215.01.T01:CDS 40.0%
GATAGTTTGATTCATCCAGC+TGG + Chr4:16291476-16291495 MsG0480019215.01.T01:CDS 40.0%
GTAACATTGTTGGACATGAG+AGG - Chr4:16289817-16289836 None:intergenic 40.0%
TACACACAAGGTTGAGGATT+AGG - Chr4:16289460-16289479 None:intergenic 40.0%
TGTAGTAGCTTTCTATCACC+TGG - Chr4:16289925-16289944 None:intergenic 40.0%
! ATGTTGGTTGGAGATGGTAT+TGG + Chr4:16290114-16290133 MsG0480019215.01.T01:CDS 40.0%
! GAGTATATGAACACTGGTCT+TGG + Chr4:16291548-16291567 MsG0480019215.01.T01:CDS 40.0%
! GATAACCTTGCCATTTGACA+CGG - Chr4:16291589-16291608 None:intergenic 40.0%
! GGATTTAACTTCAGGTCGAA+TGG + Chr4:16290295-16290314 MsG0480019215.01.T01:intron 40.0%
! TACTAGGATCTTGCCTGTTT+TGG + Chr4:16290787-16290806 MsG0480019215.01.T01:intron 40.0%
! TGTCTTTTTGCAGCTGTTGT+TGG + Chr4:16291014-16291033 MsG0480019215.01.T01:intron 40.0%
!! CTCAAGTTGATGCTCAAACA+TGG + Chr4:16289716-16289735 MsG0480019215.01.T01:CDS 40.0%
!! GTTCAAGAAAGAGCACTCAA+AGG + Chr4:16289559-16289578 MsG0480019215.01.T01:CDS 40.0%
!!! AGCTTGATGGTTTTTTGCAC+CGG - Chr4:16291081-16291100 None:intergenic 40.0%
!!! CTAGGGTTTTGTTGAGCTTA+AGG - Chr4:16289678-16289697 None:intergenic 40.0%
!!! GAAATGCCAGTGTTTTGGTT+AGG - Chr4:16291335-16291354 None:intergenic 40.0%
!!! GGTTTTGTTGAGCTTAAGGA+TGG - Chr4:16289674-16289693 None:intergenic 40.0%
AACGCAATGCAACAGCTTGA+TGG - Chr4:16291094-16291113 None:intergenic 45.0%
ACTTACCAACAGTGGCAGAA+CGG - Chr4:16290191-16290210 None:intergenic 45.0%
AGAAACCGTGTCAAATGGCA+AGG + Chr4:16291581-16291600 MsG0480019215.01.T01:CDS 45.0%
CCACAAGAAACCGTGTCAAA+TGG + Chr4:16291576-16291595 MsG0480019215.01.T01:CDS 45.0%
CCATTTGACACGGTTTCTTG+TGG - Chr4:16291579-16291598 None:intergenic 45.0%
GCCCTAGAATATTGCTTCCA+TGG - Chr4:16291434-16291453 None:intergenic 45.0%
GTAAATGGCACTTTGGTTGC+AGG - Chr4:16291683-16291702 None:intergenic 45.0%
GTCAACACAATCACTGCACA+AGG + Chr4:16291299-16291318 MsG0480019215.01.T01:CDS 45.0%
GTTTGATTCATCCAGCTGGT+TGG + Chr4:16291480-16291499 MsG0480019215.01.T01:CDS 45.0%
TTTGCAGCTGTTGTTGGAGA+TGG + Chr4:16291020-16291039 MsG0480019215.01.T01:intron 45.0%
! ACAAAGATGGGTTCCCAACA+TGG + Chr4:16289893-16289912 MsG0480019215.01.T01:CDS 45.0%
! ATCCAGCTGGTTGGTTAGAA+TGG + Chr4:16291489-16291508 MsG0480019215.01.T01:CDS 45.0%
! CAAAGATGGGTTCCCAACAT+GGG + Chr4:16289894-16289913 MsG0480019215.01.T01:CDS 45.0%
ACATTCCGTTCTGCCACTGT+TGG + Chr4:16290183-16290202 MsG0480019215.01.T01:CDS 50.0%
ACCGGATCACGGGTATAATC+CGG + Chr4:16290618-16290637 MsG0480019215.01.T01:intron 50.0%
AGTGGCAGAACGGAATGTTG+TGG - Chr4:16290181-16290200 None:intergenic 50.0%
ATGGGTTCCCAACATGGGTT+AGG + Chr4:16289899-16289918 MsG0480019215.01.T01:CDS 50.0%
CAAGCTGTTGCATTGCGTTC+CGG + Chr4:16291095-16291114 MsG0480019215.01.T01:CDS 50.0%
CGGTTTCAAATCCGAAGCAG+CGG - Chr4:16291378-16291397 None:intergenic 50.0%
CTCCATTCTAACCAACCAGC+TGG - Chr4:16291494-16291513 None:intergenic 50.0%
GGGAACCCATCTTTGTAGCT+AGG - Chr4:16289889-16289908 None:intergenic 50.0%
GTAGTAGCAAAAGACGGGTC+CGG + Chr4:16289970-16289989 MsG0480019215.01.T01:CDS 50.0%
TAGTAGCAAAAGACGGGTCC+GGG + Chr4:16289971-16289990 MsG0480019215.01.T01:CDS 50.0%
! ATCACCGGTAGCAAAAGCGT+TGG + Chr4:16290147-16290166 MsG0480019215.01.T01:CDS 50.0%
! CGCTGCTTCGGATTTGAAAC+CGG + Chr4:16291376-16291395 MsG0480019215.01.T01:CDS 50.0%
! GCTGGTTGGTTAGAATGGAG+TGG + Chr4:16291494-16291513 MsG0480019215.01.T01:CDS 50.0%
! TCCTCCAACGCTTTTGCTAC+CGG - Chr4:16290154-16290173 None:intergenic 50.0%
!! TTCTAGGGTTACCGCTGCTT+CGG + Chr4:16291364-16291383 MsG0480019215.01.T01:CDS 50.0%
CACCTGGCCTAACCCATGTT+GGG - Chr4:16289909-16289928 None:intergenic 55.0%
CCCGGATTATACCCGTGATC+CGG - Chr4:16290622-16290641 None:intergenic 55.0%
CCGGATCACGGGTATAATCC+GGG + Chr4:16290619-16290638 MsG0480019215.01.T01:intron 55.0%
TCACCTGGCCTAACCCATGT+TGG - Chr4:16289910-16289929 None:intergenic 55.0%
!! ACCGGTAGCAAAAGCGTTGG+AGG + Chr4:16290150-16290169 MsG0480019215.01.T01:CDS 55.0%
!! GGTAGCAAAAGCGTTGGAGG+AGG + Chr4:16290153-16290172 MsG0480019215.01.T01:CDS 55.0%
!! TTCCCAACATGGGTTAGGCC+AGG + Chr4:16289904-16289923 MsG0480019215.01.T01:CDS 55.0%
Chromosome Type Strat End Strand Name
Chr4 gene 16289424 16291715 16289424 ID=MsG0480019215.01;Name=MsG0480019215.01
Chr4 mRNA 16289424 16291715 16289424 ID=MsG0480019215.01.T01;Parent=MsG0480019215.01;Name=MsG0480019215.01.T01;_AED=0.42;_eAED=0.42;_QI=0|0|0|1|1|1|2|0|489
Chr4 exon 16289424 16290204 16289424 ID=MsG0480019215.01.T01:exon:4320;Parent=MsG0480019215.01.T01
Chr4 exon 16291027 16291715 16291027 ID=MsG0480019215.01.T01:exon:4321;Parent=MsG0480019215.01.T01
Chr4 CDS 16289424 16290204 16289424 ID=MsG0480019215.01.T01:cds;Parent=MsG0480019215.01.T01
Chr4 CDS 16291027 16291715 16291027 ID=MsG0480019215.01.T01:cds;Parent=MsG0480019215.01.T01
Gene Sequence

>MsG0480019215.01.T01

ATGAACGAAGTTAAACTTTGGTGTAACCAAACACCTAATCCTCAACCTTGTGTGTATTTCTTGAACAATAACCCTTCTTACCAACACAAACTCATCAAACAAAAAGTTGATTTCTTCAAACTTTCATTGGAACTTGTTCAAGAAAGAGCACTCAAAGGCCATGCAAACACTCTTTCATTAGGCTCCAAATGTAGTAACTCACGTGAAAAATCAGCTTGGGCTGATTGTGTTGAGCTATATGAACAAACCATCCTTAAGCTCAACAAAACCCTAGATACTAAAACAAAGTGTTCTCAAGTTGATGCTCAAACATGGCTAAGCACAGCTCTCACCAACCTTGAGACATGTAAAGCTGGATTCTATGATCTTGGTGTTCAAGATTATATTCTTCCTCTCATGTCCAACAATGTTACTAAATTGCTAAGTAACACTTTGGCTCTTAACAAAGTTCAATATCAAGAACCTAGCTACAAAGATGGGTTCCCAACATGGGTTAGGCCAGGTGATAGAAAGCTACTACAAACTTCGTCTTCTCGACCTAACGTAGTAGTAGCAAAAGACGGGTCCGGGAAGTACACAACTGTTAGTGCAGCCGTGAATGCTATACCAAAGAATAACAAAGGTAGGTATGTTATACATGTGAAGGCTGGTGTCTACAATGAACAAGTTGAGATAAAGGCAAAGAATATTATGTTGGTTGGAGATGGTATTGGTAAAACTGTAATCACCGGTAGCAAAAGCGTTGGAGGAGGAACCACAACATTCCGTTCTGCCACTGTTGCTGTTGTTGGAGATGGATTTATGGCTCAAGATATCACATTTAGGAACACTGCCGGTGCAAAAAACCATCAAGCTGTTGCATTGCGTTCCGGATCAGACTTGTCTGTATTTTATAGATGTAGTTTTGAAGGTTTTCAAGACACATTATATGTGCATTCAGATAGACAATTCTACAAACAATGCAACATTTATGGTACGGTTGATTTTATATTTGGTAATGCTGCTGCAGTGTTCCAAAATTGCAACATATTTGCAAGAAACCCTCCAAACAAAGTCAACACAATCACTGCACAAGGTAGAACAGATCCTAACCAAAACACTGGCATTTCTATTCACAATTCTAGGGTTACCGCTGCTTCGGATTTGAAACCGGTCCAAAATTCTGTTAAGACTTATCTTGGAAGACCATGGAAGCAATATTCTAGGGCAGTTTTTATGAAGACTTCTCTTGATAGTTTGATTCATCCAGCTGGTTGGTTAGAATGGAGTGGTAATTTTGCATTAAGTACTTTATATTATGGAGAGTATATGAACACTGGTCTTGGTTCTTCCACAAGAAACCGTGTCAAATGGCAAGGTTATCATGTGATAACAAGTGCTTCTGAAGCATCAAAGTTCACTGTATCAAATTTCATTGCTGGAAATGCTTGGTTACCTGCAACCAAAGTGCCATTTACATCTACTCTTTAA
Protein sequence

>MsG0480019215.01.T01

MNEVKLWCNQTPNPQPCVYFLNNNPSYQHKLIKQKVDFFKLSLELVQERALKGHANTLSLGSKCSNSREKSAWADCVELYEQTILKLNKTLDTKTKCSQVDAQTWLSTALTNLETCKAGFYDLGVQDYILPLMSNNVTKLLSNTLALNKVQYQEPSYKDGFPTWVRPGDRKLLQTSSSRPNVVVAKDGSGKYTTVSAAVNAIPKNNKGRYVIHVKAGVYNEQVEIKAKNIMLVGDGIGKTVITGSKSVGGGTTTFRSATVAVVGDGFMAQDITFRNTAGAKNHQAVALRSGSDLSVFYRCSFEGFQDTLYVHSDRQFYKQCNIYGTVDFIFGNAAAVFQNCNIFARNPPNKVNTITAQGRTDPNQNTGISIHNSRVTAASDLKPVQNSVKTYLGRPWKQYSRAVFMKTSLDSLIHPAGWLEWSGNFALSTLYYGEYMNTGLGSSTRNRVKWQGYHVITSASEASKFTVSNFIAGNAWLPATKVPFTSTL*