AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180004834.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004834.01.T01 MTR_1g088180 90.239 461 28 1 54 514 1 444 0.0 691
MsG0180004834.01.T01 MTR_7g108810 77.895 285 57 2 50 328 98 382 5.37e-118 353
MsG0180004834.01.T01 MTR_8g058530 77.857 280 56 2 54 327 1 280 6.02e-118 350
MsG0180004834.01.T01 MTR_1g083400 58.672 271 104 3 42 311 20 283 2.91e-84 263
MsG0180004834.01.T01 MTR_7g112760 67.179 195 62 1 54 248 1 193 3.33e-78 246
MsG0180004834.01.T01 MTR_7g112760 67.179 195 62 1 54 248 1 193 1.50e-77 246
MsG0180004834.01.T01 MTR_3g092580 60.096 208 71 1 46 241 100 307 5.16e-75 242
MsG0180004834.01.T01 MTR_2g031870 52.273 132 45 2 347 476 98 213 3.80e-32 124
MsG0180004834.01.T01 MTR_2g031870 52.273 132 45 2 347 476 124 239 6.32e-32 125
MsG0180004834.01.T01 MTR_2g031870 71.154 52 15 0 1 52 1 52 2.65e-19 89.0
MsG0180004834.01.T01 MTR_8g494240 51.515 132 46 2 347 476 122 237 1.14e-30 121
MsG0180004834.01.T01 MTR_8g494240 78.846 52 11 0 1 52 1 52 2.65e-21 94.7
MsG0180004834.01.T01 MTR_8g494240 51.515 132 46 2 347 476 122 237 1.83e-30 121
MsG0180004834.01.T01 MTR_8g494240 78.846 52 11 0 1 52 1 52 3.25e-21 94.7
MsG0180004834.01.T01 MTR_8g494240 51.515 132 46 2 347 476 122 237 8.56e-30 121
MsG0180004834.01.T01 MTR_8g494240 78.846 52 11 0 1 52 1 52 1.67e-20 94.0
MsG0180004834.01.T01 MTR_8g092810 44.295 149 56 3 343 480 120 252 1.91e-26 112
MsG0180004834.01.T01 MTR_8g092810 71.154 52 15 0 1 52 1 52 5.04e-18 87.0
MsG0180004834.01.T01 MTR_0095s0040 78.846 52 11 0 1 52 1 52 2.98e-21 93.6
MsG0180004834.01.T01 MTR_1g041765 62.903 62 21 1 1 62 1 60 2.22e-17 80.9
MsG0180004834.01.T01 MTR_4g097130 59.091 66 25 1 1 66 1 64 6.38e-17 82.0
MsG0180004834.01.T01 MTR_4g097130 59.091 66 25 1 1 66 1 64 7.64e-17 82.0
MsG0180004834.01.T01 MTR_4g097130 59.091 66 25 1 1 66 1 64 7.74e-17 82.0
MsG0180004834.01.T01 MTR_5g015340 65.385 52 18 0 1 52 1 52 5.10e-16 79.0
MsG0180004834.01.T01 MTR_5g015340 33.784 148 76 4 325 469 101 229 4.42e-12 67.4
MsG0180004834.01.T01 MTR_5g015340 65.385 52 18 0 1 52 1 52 5.10e-16 79.0
MsG0180004834.01.T01 MTR_5g015340 33.784 148 76 4 325 469 101 229 4.42e-12 67.4
MsG0180004834.01.T01 MTR_5g015340 65.385 52 18 0 1 52 1 52 2.87e-15 78.2
MsG0180004834.01.T01 MTR_5g015340 33.784 148 76 4 325 469 101 229 8.56e-12 67.4
MsG0180004834.01.T01 MTR_8g032130 74.359 39 10 0 441 479 1 39 5.05e-12 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004834.01.T01 AT1G02840 59.928 277 92 3 54 322 1 266 3.87e-82 257
MsG0180004834.01.T01 AT1G02840 59.928 277 92 3 54 322 1 266 3.91e-82 257
MsG0180004834.01.T01 AT1G02840 59.928 277 92 3 54 322 1 266 3.91e-82 257
MsG0180004834.01.T01 AT1G02840 59.928 277 92 3 54 322 1 266 3.91e-82 257
MsG0180004834.01.T01 AT1G02840 62.598 254 85 2 54 299 1 252 3.12e-81 256
MsG0180004834.01.T01 AT1G09140 64.615 195 67 1 54 248 1 193 2.17e-76 241
MsG0180004834.01.T01 AT1G09140 64.615 195 67 1 54 248 1 193 2.62e-76 241
MsG0180004834.01.T01 AT1G09140 64.615 195 67 1 54 248 1 193 3.32e-76 241
MsG0180004834.01.T01 AT4G02430 63.819 199 56 3 54 241 1 194 5.38e-73 233
MsG0180004834.01.T01 AT4G02430 63.819 199 56 3 54 241 1 194 1.01e-72 233
MsG0180004834.01.T01 AT3G49430 58.291 199 72 1 54 241 1 199 1.22e-72 233
MsG0180004834.01.T01 AT3G49430 58.291 199 72 1 54 241 1 199 1.22e-72 233
MsG0180004834.01.T01 AT3G49430 58.291 199 72 1 54 241 1 199 1.22e-72 233
MsG0180004834.01.T01 AT3G49430 58.291 199 72 1 54 241 1 199 1.22e-72 233
MsG0180004834.01.T01 AT3G49430 58.291 199 72 1 54 241 1 199 1.22e-72 233
MsG0180004834.01.T01 AT3G49430 58.291 199 72 1 54 241 1 199 1.22e-72 233
MsG0180004834.01.T01 AT3G49430 58.291 199 72 1 54 241 1 199 3.52e-72 232
MsG0180004834.01.T01 AT4G02430 63.483 178 52 2 54 220 1 176 3.82e-65 209
MsG0180004834.01.T01 AT4G02430 61.494 174 51 3 79 241 24 192 4.75e-58 194
MsG0180004834.01.T01 AT1G49950 69.231 52 16 0 1 52 1 52 1.29e-17 84.0
MsG0180004834.01.T01 AT1G49950 36.232 138 63 4 347 477 120 239 2.26e-13 71.2
MsG0180004834.01.T01 AT1G49950 69.231 52 16 0 1 52 1 52 1.29e-17 84.0
MsG0180004834.01.T01 AT1G49950 36.232 138 63 4 347 477 120 239 2.26e-13 71.2
MsG0180004834.01.T01 AT1G49950 69.231 52 16 0 1 52 1 52 1.29e-17 84.0
MsG0180004834.01.T01 AT1G49950 36.232 138 63 4 347 477 120 239 2.26e-13 71.2
MsG0180004834.01.T01 AT5G67580 58.462 65 25 1 1 65 1 63 3.88e-15 76.6
MsG0180004834.01.T01 AT5G67580 58.462 65 25 1 1 65 1 63 3.88e-15 76.6
MsG0180004834.01.T01 AT3G49850 53.030 66 29 1 1 66 1 64 2.24e-13 71.2
MsG0180004834.01.T01 AT3G49850 53.030 66 29 1 1 66 1 64 2.24e-13 71.2

Find 149 sgRNAs with CRISPR-Local

Find 413 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTGATTGTCTTGCTCTTTC+TGG 0.066799 1:+83358855 None:intergenic
AAGCCAAGATTTACCATCTT+TGG 0.173726 1:+83358620 None:intergenic
AAACATTTGTTTATGAAGTA+TGG 0.237511 1:-83362702 MsG0180004834.01.T01:CDS
TCGTGACCCTTCTCATTATA+GGG 0.265643 1:-83362181 MsG0180004834.01.T01:CDS
GTGCAGCTTCGACCCGTAAT+TGG 0.279387 1:+83362553 None:intergenic
AGCCAAGATTTACCATCTTT+GGG 0.322088 1:+83358621 None:intergenic
TAGATATAGCCTCCATTATA+AGG 0.330489 1:+83361521 None:intergenic
AGCTTGACGGCTCTGAGTTC+CGG 0.330618 1:-83362272 MsG0180004834.01.T01:CDS
CTACGGCTCCTGCTCCTACT+TGG 0.345238 1:+83361928 None:intergenic
TCAAGCACGGGGTGGGTAAA+TGG 0.353992 1:-83363563 MsG0180004834.01.T01:CDS
AAACCTTGAGATTGACATTT+GGG 0.362470 1:+83363493 None:intergenic
TACCCTTGGGAAATTTGCTT+TGG 0.364511 1:+83362097 None:intergenic
GTCGTGACCCTTCTCATTAT+AGG 0.367295 1:-83362182 MsG0180004834.01.T01:CDS
TGCATCCTGCCAGGATCTTA+AGG 0.372928 1:-83362409 MsG0180004834.01.T01:CDS
CAGAATGGATAACCTTATAA+TGG 0.373169 1:-83361533 MsG0180004834.01.T01:CDS
AATGTTTAACTTCTCTTTCA+CGG 0.383899 1:+83362718 None:intergenic
CAAACCTTGAGATTGACATT+TGG 0.397969 1:+83363492 None:intergenic
TGGGTGCTCCTAAGCAGAAT+TGG 0.401670 1:-83363623 MsG0180004834.01.T01:CDS
CCCAGGTTGTTCATGATGGA+AGG 0.411711 1:-83362353 MsG0180004834.01.T01:CDS
TCTGATGTCCAATTCTGCTT+AGG 0.413337 1:+83363615 None:intergenic
AGCGACTCTTTGAAGTTTGA+CGG 0.414603 1:+83360920 None:intergenic
GGCTATATCTAGCTTGAATC+AGG 0.419555 1:-83361509 MsG0180004834.01.T01:CDS
GAACGAGAAACTAATCTTGC+TGG 0.420598 1:+83362057 None:intergenic
TGCGGCTGCACCTGCGGCTG+CGG 0.428666 1:+83362145 None:intergenic
GCCCTCTTCTGCATCCTGCC+AGG 0.434027 1:-83362418 MsG0180004834.01.T01:CDS
CGTTGTGAGGATTTACCCTT+GGG 0.434420 1:+83362084 None:intergenic
CGCAGCCGCAGGTGCAGTCC+AGG 0.440371 1:-83362126 MsG0180004834.01.T01:CDS
GCAGGTGCAGCCGCAGCCGC+AGG 0.444444 1:-83362137 MsG0180004834.01.T01:CDS
GAAGCTTATGTAGCAGCTGC+AGG 0.447550 1:-83358669 MsG0180004834.01.T01:CDS
CTGGACTGCACCTGCGGCTG+CGG 0.448863 1:+83362127 None:intergenic
AGTCTAACTCAGACTGTGTA+AGG 0.449162 1:+83358775 None:intergenic
AATTTGCTTTGGCTATGTCC+TGG 0.451019 1:+83362108 None:intergenic
ATGCCTCTATGAACTGTGAC+AGG 0.451365 1:-83358812 MsG0180004834.01.T01:CDS
TTGAGCAGAACTGTCTATGT+TGG 0.452806 1:-83362759 MsG0180004834.01.T01:CDS
GAATATCGTGTTCTAGTCAA+TGG 0.452895 1:-83362444 MsG0180004834.01.T01:CDS
ATCCCAAAGATGGTAAATCT+TGG 0.454228 1:-83358623 MsG0180004834.01.T01:CDS
CATAACTCGCATTGATCTAA+AGG 0.464349 1:-83362676 MsG0180004834.01.T01:CDS
TGAGCAGAACTGTCTATGTT+GGG 0.467645 1:-83362758 MsG0180004834.01.T01:CDS
GCGACTCTTTGAAGTTTGAC+GGG 0.468645 1:+83360921 None:intergenic
TTGTGGTCTTGATAAAGAAC+AGG 0.470584 1:+83362017 None:intergenic
AAGGATCACATGCGAAAAGC+AGG 0.471288 1:-83362390 MsG0180004834.01.T01:CDS
GGCAGCCACATTTGCTGAAG+TGG 0.473979 1:-83358715 MsG0180004834.01.T01:CDS
AACAATGGCCAGGGTGGTCG+AGG 0.475550 1:-83362483 MsG0180004834.01.T01:CDS
TCAATTAGAGATCATACTCA+TGG 0.477251 1:-83358933 MsG0180004834.01.T01:intron
CATGATGGAAGGGCTACTAC+TGG 0.489348 1:-83362342 MsG0180004834.01.T01:CDS
TGCGGCTGCGGCTGCACCTG+CGG 0.491560 1:+83362139 None:intergenic
CTTCTGCAGCTTCCTCTATG+AGG 0.491892 1:+83358688 None:intergenic
GCATGTGATCCTTAAGATCC+TGG 0.492160 1:+83362400 None:intergenic
GAAGATATAGCCGCAGCCGC+AGG 0.494953 1:-83362155 MsG0180004834.01.T01:CDS
GAGGAAGCGGTGATTAAAGC+TGG 0.495075 1:-83363591 MsG0180004834.01.T01:CDS
CTTTATCAAGACCACAATCA+AGG 0.498752 1:-83362011 MsG0180004834.01.T01:CDS
CTGAAGTCTCTCACATCTAG+TGG 0.502259 1:-83360887 MsG0180004834.01.T01:CDS
CAAGACCACAATCAAGGCCT+AGG 0.505060 1:-83362005 MsG0180004834.01.T01:CDS
TAAAGAACAGGATCTAGATC+TGG 0.509339 1:+83362029 None:intergenic
CCCTTCCATCATGAACAACC+TGG 0.514903 1:+83362352 None:intergenic
AGGCGGGACTCTAGAAGTCT+TGG 0.515579 1:-83362204 MsG0180004834.01.T01:CDS
TTCTGCCTCCCTTCCAACAC+GGG 0.517994 1:+83358834 None:intergenic
TTCTGCAGCTTCCTCTATGA+GGG 0.519176 1:+83358689 None:intergenic
CAGGTCTTACGTTCGTGTGA+GGG 0.523597 1:-83362238 MsG0180004834.01.T01:CDS
ATCTAGTGGAAAACTGATCA+AGG 0.524604 1:-83360873 MsG0180004834.01.T01:CDS
TCTCTTTCACGGATATCGCC+AGG 0.525115 1:+83362729 None:intergenic
AAGCTGGAGTTGTCAAGCAC+GGG 0.526040 1:-83363575 MsG0180004834.01.T01:CDS
CAGTATTCACAACAATGGCC+AGG 0.526282 1:-83362493 MsG0180004834.01.T01:CDS
GGCTTCCACTTCAGCAAATG+TGG 0.527029 1:+83358710 None:intergenic
CCAGGTCTTACGTTCGTGTG+AGG 0.529487 1:-83362239 MsG0180004834.01.T01:CDS
AGCAAGACAATCACCCGTGT+TGG 0.529523 1:-83358847 MsG0180004834.01.T01:CDS
GCAGGAGTCCAAGTAGGAGC+AGG 0.530125 1:-83361936 MsG0180004834.01.T01:CDS
GTCTATGTTGGGAATCTACC+TGG 0.530479 1:-83362747 MsG0180004834.01.T01:CDS
AGCTGTAGTATTACAAAGGA+AGG 0.530942 1:+83358595 None:intergenic
AACACGATATTCAGAGTGAC+TGG 0.532664 1:+83362455 None:intergenic
AAGGGCTACTACTGGGATTG+TGG 0.536560 1:-83362334 MsG0180004834.01.T01:CDS
CCAGGTTGTTCATGATGGAA+GGG 0.536752 1:-83362352 MsG0180004834.01.T01:CDS
AGACAATCACCCGTGTTGGA+AGG 0.540537 1:-83358843 MsG0180004834.01.T01:CDS
TGCTCTTTCTGGATATGCTG+AGG 0.541893 1:+83358866 None:intergenic
GACAATCACCCGTGTTGGAA+GGG 0.544342 1:-83358842 MsG0180004834.01.T01:CDS
GCCGTAGCAAGAGTTTGTCC+AGG 0.544644 1:-83361912 MsG0180004834.01.T01:intron
CTTTCTGGATATGCTGAGGT+AGG 0.546286 1:+83358870 None:intergenic
CTTCTTCCCCTATAATGAGA+AGG 0.548764 1:+83362174 None:intergenic
ACCTGGACAAACTCTTGCTA+CGG 0.549295 1:+83361911 None:intergenic
AAGGATTGCTAATTTCATAG+AGG 0.551226 1:-83361467 MsG0180004834.01.T01:intron
TTCTTCCCCTATAATGAGAA+GGG 0.552088 1:+83362175 None:intergenic
GTGATCCTTAAGATCCTGGC+AGG 0.553887 1:+83362404 None:intergenic
GGCTGCCTCTTGTGCAGACA+CGG 0.556041 1:+83358731 None:intergenic
ACGTTGTGAGGATTTACCCT+TGG 0.556462 1:+83362083 None:intergenic
GTGCTAGCAGGAGTCCAAGT+AGG 0.558874 1:-83361942 MsG0180004834.01.T01:CDS
TCGCCCAAATGTCAATCTCA+AGG 0.559308 1:-83363496 MsG0180004834.01.T01:intron
GGAGTTGTCAAGCACGGGGT+GGG 0.561195 1:-83363570 MsG0180004834.01.T01:CDS
GGGAGAAACAATCCCAAAGA+TGG 0.562021 1:-83358633 MsG0180004834.01.T01:CDS
TTGGACATCAGAAGAGGAAG+CGG 0.562107 1:-83363604 MsG0180004834.01.T01:CDS
AATGCTGACGATGCAATTTG+TGG 0.562206 1:-83362603 MsG0180004834.01.T01:CDS
ATTCTGCCTCCCTTCCAACA+CGG 0.567843 1:+83358833 None:intergenic
TATAAGACACGGTTAAACTC+TGG 0.569316 1:+83363522 None:intergenic
AGCTGCAGGGGAAAGACTGA+AGG 0.570597 1:-83358655 MsG0180004834.01.T01:CDS
AACACTACAAATGCATAGCA+AGG 0.573032 1:+83362639 None:intergenic
GTTAGACTTTCAATTAGCAA+TGG 0.573973 1:-83358760 MsG0180004834.01.T01:CDS
AGGATCACATGCGAAAAGCA+GGG 0.574593 1:-83362389 MsG0180004834.01.T01:CDS
CAATTAGAGATCATACTCAT+GGG 0.577395 1:-83358932 MsG0180004834.01.T01:intron
AATGTCCGTGTCTGCACAAG+AGG 0.580785 1:-83358736 MsG0180004834.01.T01:CDS
TATATCTAGCTTGAATCAGG+TGG 0.583989 1:-83361506 MsG0180004834.01.T01:CDS
AAGCTTATGTAGCAGCTGCA+GGG 0.584325 1:-83358668 MsG0180004834.01.T01:CDS
ATCCTGGCAGGATGCAGAAG+AGG 0.584528 1:+83362416 None:intergenic
CGCAGAGGTAATGGAGACCT+AGG 0.588079 1:+83361988 None:intergenic
AGCTTATGTAGCAGCTGCAG+GGG 0.588273 1:-83358667 MsG0180004834.01.T01:CDS
ATGATGGAAGGGCTACTACT+GGG 0.595339 1:-83362341 MsG0180004834.01.T01:CDS
GATGCAATTTGTGGGTGTGA+TGG 0.595466 1:-83362594 MsG0180004834.01.T01:CDS
ATCCCTGTCACAGTTCATAG+AGG 0.596019 1:+83358809 None:intergenic
TGAAGTTTGACGGGGACCCG+TGG 0.597796 1:+83360930 None:intergenic
CCTCACACGAACGTAAGACC+TGG 0.598258 1:+83362239 None:intergenic
GTGTGAGGGAATATGATTCG+AGG 0.600035 1:-83362224 MsG0180004834.01.T01:CDS
ATGCTGACGATGCAATTTGT+GGG 0.600261 1:-83362602 MsG0180004834.01.T01:CDS
ACACTACAAATGCATAGCAA+GGG 0.601578 1:+83362640 None:intergenic
GTATTCTGTAGGACCACCAC+GGG 0.603546 1:-83360946 MsG0180004834.01.T01:intron
TCTTGCTGGTGAACGTTGTG+AGG 0.603550 1:+83362071 None:intergenic
TCCTGGCAGGATGCAGAAGA+GGG 0.604747 1:+83362417 None:intergenic
AATCACCCGTGTTGGAAGGG+AGG 0.604837 1:-83358839 MsG0180004834.01.T01:CDS
GCTGCAGGGGAAAGACTGAA+GGG 0.605527 1:-83358654 MsG0180004834.01.T01:CDS
TAGCCAAAGCAAATTTCCCA+AGG 0.606062 1:-83362100 MsG0180004834.01.T01:CDS
CGGGTCGAAGCTGCACATGT+TGG 0.607232 1:-83362546 MsG0180004834.01.T01:CDS
AAAGCTGGAGTTGTCAAGCA+CGG 0.610578 1:-83363576 MsG0180004834.01.T01:CDS
CACTACAAATGCATAGCAAG+GGG 0.613137 1:+83362641 None:intergenic
TGGATATTCCTCGACCACCC+TGG 0.613801 1:+83362475 None:intergenic
TGGAGTTGTCAAGCACGGGG+TGG 0.618850 1:-83363571 MsG0180004834.01.T01:CDS
CGTGACCCTTCTCATTATAG+GGG 0.621306 1:-83362180 MsG0180004834.01.T01:CDS
GCAGAATTGGACATCAGAAG+AGG 0.625184 1:-83363610 MsG0180004834.01.T01:CDS
GAGGGAATATGATTCGAGGC+GGG 0.630693 1:-83362220 MsG0180004834.01.T01:CDS
GGAGACCTAGGCCTTGATTG+TGG 0.631250 1:+83362000 None:intergenic
ATTAAGCTGTAGTATTACAA+AGG 0.631925 1:+83358591 None:intergenic
GGATCACATGCGAAAAGCAG+GGG 0.632074 1:-83362388 MsG0180004834.01.T01:CDS
AATGGATAACCTTATAATGG+AGG 0.633236 1:-83361530 MsG0180004834.01.T01:CDS
CGACTCTTTGAAGTTTGACG+GGG 0.633789 1:+83360922 None:intergenic
ATATCTAGCTTGAATCAGGT+GGG 0.639643 1:-83361505 MsG0180004834.01.T01:CDS
AGTTTGACGGGGACCCGTGG+TGG 0.643416 1:+83360933 None:intergenic
TGTATTCTGTAGGACCACCA+CGG 0.644372 1:-83360947 MsG0180004834.01.T01:intron
TATGTCCTGGACTGCACCTG+CGG 0.645108 1:+83362121 None:intergenic
TGAAGTGGAAGCCCTCATAG+AGG 0.645724 1:-83358700 MsG0180004834.01.T01:CDS
CCTTCCATCATGAACAACCT+GGG 0.645797 1:+83362353 None:intergenic
CTGCAGGGGAAAGACTGAAG+GGG 0.663521 1:-83358653 MsG0180004834.01.T01:CDS
TGCCTCTATGAACTGTGACA+GGG 0.664675 1:-83358811 MsG0180004834.01.T01:CDS
AGCCAAAGCAAATTTCCCAA+GGG 0.667784 1:-83362099 MsG0180004834.01.T01:CDS
CGATACAGTATTCACAACAA+TGG 0.667801 1:-83362498 MsG0180004834.01.T01:CDS
TTGATCTAAAGGTTCCGCCA+AGG 0.670359 1:-83362665 MsG0180004834.01.T01:CDS
TCTAGCTTGAATCAGGTGGG+TGG 0.677401 1:-83361502 MsG0180004834.01.T01:CDS
TGGGTGGTTCTAATGAAACA+AGG 0.684472 1:-83361486 MsG0180004834.01.T01:CDS
TGAGGGAATATGATTCGAGG+CGG 0.687368 1:-83362221 MsG0180004834.01.T01:CDS
AGTATTCACAACAATGGCCA+GGG 0.697356 1:-83362492 MsG0180004834.01.T01:CDS
AGCTGGAGTTGTCAAGCACG+GGG 0.698231 1:-83363574 MsG0180004834.01.T01:CDS
TTGGGCGAATATATAAGACA+CGG 0.721464 1:+83363511 None:intergenic
ATTCACAACAATGGCCAGGG+TGG 0.724016 1:-83362489 MsG0180004834.01.T01:CDS
ACTACAAATGCATAGCAAGG+GGG 0.768168 1:+83362642 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATTTGTTTAATTATGATT+AGG - Chr1:83360979-83360998 MsG0180004834.01.T01:intron 10.0%
!! AATAAATGTTGAATAAATGT+TGG - Chr1:83359002-83359021 MsG0180004834.01.T01:intron 15.0%
!! GAATTTAGTTAGAATAATAA+GGG + Chr1:83362162-83362181 None:intergenic 15.0%
!! TAATTAAACAAATAACATCA+TGG + Chr1:83360974-83360993 None:intergenic 15.0%
!! TAATTTCAAAACTTAGTATT+TGG - Chr1:83360517-83360536 MsG0180004834.01.T01:intron 15.0%
!! TAGATGTAAAATTACATAAA+AGG + Chr1:83362583-83362602 None:intergenic 15.0%
!! TTTATTATATAAATGAACTC+TGG + Chr1:83362555-83362574 None:intergenic 15.0%
!!! ACATGAAAATTGATTTTTTT+AGG + Chr1:83362474-83362493 None:intergenic 15.0%
!!! ATTAAGTATTGATAATTGAA+TGG + Chr1:83359048-83359067 None:intergenic 15.0%
!!! GTTTTTGTTCTTTATATTTT+AGG - Chr1:83363182-83363201 MsG0180004834.01.T01:intron 15.0%
!!! TGCTTTTAATTCATTTAATT+CGG - Chr1:83360822-83360841 MsG0180004834.01.T01:intron 15.0%
!! AAACATTTGTTTATGAAGTA+TGG - Chr1:83359527-83359546 MsG0180004834.01.T01:intron 20.0%
!! GGAATTTAGTTAGAATAATA+AGG + Chr1:83362163-83362182 None:intergenic 20.0%
!! TGAATTGACTAAATCTTATT+TGG - Chr1:83361133-83361152 MsG0180004834.01.T01:intron 20.0%
!!! AGAATTAGGGTTTTAATTTT+CGG + Chr1:83359377-83359396 None:intergenic 20.0%
!!! ATTGATTTTTTTAGGAACTA+TGG + Chr1:83362466-83362485 None:intergenic 20.0%
!!! GTGCTTATTTGTTTATTTTT+TGG - Chr1:83358778-83358797 MsG0180004834.01.T01:CDS 20.0%
!!! TTGATTTTTTTAGGAACTAT+GGG + Chr1:83362465-83362484 None:intergenic 20.0%
!!! TTTTTAGATGTCATATTTAC+TGG - Chr1:83363271-83363290 MsG0180004834.01.T01:intron 20.0%
! AAAGCAGAAAAGATAAAAGA+AGG + Chr1:83360808-83360827 None:intergenic 25.0%
! AAGCAGAAAAGATAAAAGAA+GGG + Chr1:83360807-83360826 None:intergenic 25.0%
! AATTCATTTAATTCGGTTGT+TGG - Chr1:83360829-83360848 MsG0180004834.01.T01:intron 25.0%
! ACAAATAACATCATGGAATA+TGG + Chr1:83360967-83360986 None:intergenic 25.0%
! AGCTGAATAAAAAAAATCTC+AGG - Chr1:83362896-83362915 MsG0180004834.01.T01:intron 25.0%
! ATGAGAATAGCATTCAAATA+TGG + Chr1:83363252-83363271 None:intergenic 25.0%
! CATATAAAACAGTATTGTAG+AGG + Chr1:83361619-83361638 None:intergenic 25.0%
! GAAAAATCAAAGTCTTACAT+TGG - Chr1:83361690-83361709 MsG0180004834.01.T01:intron 25.0%
! GAAATGAAAGAGAAGATTAA+GGG + Chr1:83362193-83362212 None:intergenic 25.0%
! GCTGAATAAAAAAAATCTCA+GGG - Chr1:83362897-83362916 MsG0180004834.01.T01:intron 25.0%
! GTTGATATTAGTACAAATAC+TGG - Chr1:83361003-83361022 MsG0180004834.01.T01:intron 25.0%
! TAGAATAATAAGGGTAAAAC+TGG + Chr1:83362153-83362172 None:intergenic 25.0%
! TAGATTCTCTAGTTGAAATA+CGG - Chr1:83359095-83359114 MsG0180004834.01.T01:intron 25.0%
! TCTACTACCATACAAAATTA+AGG + Chr1:83360493-83360512 None:intergenic 25.0%
! TGAAATGAAAGAGAAGATTA+AGG + Chr1:83362194-83362213 None:intergenic 25.0%
! TTCGCAAAGAAAGAAAAAAT+GGG + Chr1:83362349-83362368 None:intergenic 25.0%
! TTTAACAAAACTTCCTTTGT+TGG + Chr1:83358853-83358872 None:intergenic 25.0%
!! AATGTTTAACTTCTCTTTCA+CGG + Chr1:83359514-83359533 None:intergenic 25.0%
!! ATCAAACATTTACTCTAAGA+TGG - Chr1:83361651-83361670 MsG0180004834.01.T01:intron 25.0%
!! CTCTACAATACTGTTTTATA+TGG - Chr1:83361617-83361636 MsG0180004834.01.T01:intron 25.0%
!! GTAATGGTTTGTGTTTATTT+CGG - Chr1:83360643-83360662 MsG0180004834.01.T01:intron 25.0%
!! TAATACCATCTTGTGTTTTT+GGG + Chr1:83361796-83361815 None:intergenic 25.0%
!! TCTTTTCTTCTTTGATTGAA+GGG + Chr1:83359438-83359457 None:intergenic 25.0%
!! TGTTAAAAATGACACTTTTC+AGG - Chr1:83358866-83358885 MsG0180004834.01.T01:CDS 25.0%
!! TTATTTCTCATCATTTCAAC+TGG + Chr1:83362991-83363010 None:intergenic 25.0%
!! TTCTTTTCTTCTTTGATTGA+AGG + Chr1:83359439-83359458 None:intergenic 25.0%
!! TTTCTAGTAATATTTGACGT+TGG - Chr1:83360399-83360418 MsG0180004834.01.T01:intron 25.0%
!!! AATTAGGGTTTTAATTTTCG+GGG + Chr1:83359375-83359394 None:intergenic 25.0%
!!! ATTAAGTATCGAGAATTGAA+TGG + Chr1:83358985-83359004 None:intergenic 25.0%
!!! GAATTAGGGTTTTAATTTTC+GGG + Chr1:83359376-83359395 None:intergenic 25.0%
!!! GATATTCTAAAATACTGTTC+AGG + Chr1:83360928-83360947 None:intergenic 25.0%
AAAAAACTCAATGCTCACAT+TGG - Chr1:83361899-83361918 MsG0180004834.01.T01:intron 30.0%
AAACCTTGAGATTGACATTT+GGG + Chr1:83358739-83358758 None:intergenic 30.0%
AACTTAGTTCATGGCTAATT+TGG + Chr1:83361848-83361867 None:intergenic 30.0%
AAGATGGAGTGAAATAGTAT+TGG - Chr1:83361667-83361686 MsG0180004834.01.T01:intron 30.0%
AAGGATTGCTAATTTCATAG+AGG - Chr1:83360762-83360781 MsG0180004834.01.T01:intron 30.0%
AAGGCTTGAATAGAACTTAT+AGG - Chr1:83361930-83361949 MsG0180004834.01.T01:CDS 30.0%
AAGTAGAGCTTATAAATCCT+TGG - Chr1:83361728-83361747 MsG0180004834.01.T01:intron 30.0%
AAGTGTTATAGCATTCCATT+TGG - Chr1:83361196-83361215 MsG0180004834.01.T01:intron 30.0%
AATGGATAACCTTATAATGG+AGG - Chr1:83360699-83360718 MsG0180004834.01.T01:intron 30.0%
ACACTACTAAACTTAGTTCA+TGG + Chr1:83361857-83361876 None:intergenic 30.0%
AGATGGAGTGAAATAGTATT+GGG - Chr1:83361668-83361687 MsG0180004834.01.T01:intron 30.0%
AGATTCTCTAGTTGAAATAC+GGG - Chr1:83359096-83359115 MsG0180004834.01.T01:intron 30.0%
AGGATTTATAAGCTCTACTT+AGG + Chr1:83361728-83361747 None:intergenic 30.0%
AGGCTTGAATAGAACTTATA+GGG - Chr1:83361931-83361950 MsG0180004834.01.T01:CDS 30.0%
AGTCATATAAGGTAATACCA+GGG + Chr1:83362825-83362844 None:intergenic 30.0%
ATAAAAAAAATCTCAGGGCA+AGG - Chr1:83362902-83362921 MsG0180004834.01.T01:intron 30.0%
CAATTAGAGATCATACTCAT+GGG - Chr1:83363297-83363316 MsG0180004834.01.T01:intron 30.0%
CAGAATGGATAACCTTATAA+TGG - Chr1:83360696-83360715 MsG0180004834.01.T01:intron 30.0%
CATTCTGTTTAACGTAAACA+CGG + Chr1:83360683-83360702 None:intergenic 30.0%
CCATTACAATTTACAGCAAA+AGG + Chr1:83360630-83360649 None:intergenic 30.0%
GAAAATAATTGGGATTGAGT+GGG + Chr1:83362279-83362298 None:intergenic 30.0%
GAACTAAGTTTAGTAGTGTT+GGG - Chr1:83361858-83361877 MsG0180004834.01.T01:intron 30.0%
GATTGTTACTAGTAAAGATG+TGG - Chr1:83360348-83360367 MsG0180004834.01.T01:intron 30.0%
GGATATCCTATTTATAGTAG+AGG - Chr1:83361551-83361570 MsG0180004834.01.T01:intron 30.0%
GGTAAACCTCTACTATAAAT+AGG + Chr1:83361560-83361579 None:intergenic 30.0%
GTAGCATGCTTATTATTACA+AGG + Chr1:83363015-83363034 None:intergenic 30.0%
GTGTGACACTGAAAATAATT+GGG + Chr1:83362289-83362308 None:intergenic 30.0%
GTTAGACTTTCAATTAGCAA+TGG - Chr1:83363469-83363488 MsG0180004834.01.T01:intron 30.0%
GTTCGCAAAGAAAGAAAAAA+TGG + Chr1:83362350-83362369 None:intergenic 30.0%
TAAATGTTGGACCATCAATA+CGG - Chr1:83359015-83359034 MsG0180004834.01.T01:intron 30.0%
TAGATATAGCCTCCATTATA+AGG + Chr1:83360711-83360730 None:intergenic 30.0%
TATGCTATCAAAAAGCTTGA+CGG - Chr1:83359944-83359963 MsG0180004834.01.T01:intron 30.0%
TATTGAATGAGATTGAAACG+TGG - Chr1:83361530-83361549 MsG0180004834.01.T01:CDS 30.0%
TATTGTATGTTTGCATCAGA+TGG + Chr1:83361410-83361429 None:intergenic 30.0%
TCAATTAGAGATCATACTCA+TGG - Chr1:83363296-83363315 MsG0180004834.01.T01:intron 30.0%
TCTATCCTAGACACATTATT+GGG - Chr1:83361819-83361838 MsG0180004834.01.T01:intron 30.0%
TGAAAATAATTGGGATTGAG+TGG + Chr1:83362280-83362299 None:intergenic 30.0%
TGAACTAAGTTTAGTAGTGT+TGG - Chr1:83361857-83361876 MsG0180004834.01.T01:intron 30.0%
TGTGTGACACTGAAAATAAT+TGG + Chr1:83362290-83362309 None:intergenic 30.0%
TTACAATTTACAGCAAAAGG+AGG + Chr1:83360627-83360646 None:intergenic 30.0%
TTACCAAATAAACCCAAACA+AGG + Chr1:83360545-83360564 None:intergenic 30.0%
! ATCTTTTTGCAAAAAGGCAA+GGG - Chr1:83359245-83359264 MsG0180004834.01.T01:intron 30.0%
! CTAATACCATCTTGTGTTTT+TGG + Chr1:83361797-83361816 None:intergenic 30.0%
! CTTTACATCCCATATCTTTT+GGG - Chr1:83361583-83361602 MsG0180004834.01.T01:intron 30.0%
! CTTTTCTTCTTTGATTGAAG+GGG + Chr1:83359437-83359456 None:intergenic 30.0%
! GAAGTGTTTGGTAAAATTAG+CGG + Chr1:83362618-83362637 None:intergenic 30.0%
! GTTTATTTGGTAATTGGTAG+TGG - Chr1:83360552-83360571 MsG0180004834.01.T01:intron 30.0%
! GTTTGGGTTTATTTGGTAAT+TGG - Chr1:83360546-83360565 MsG0180004834.01.T01:intron 30.0%
! TAGTATTTGGTTCCTTGTTT+GGG - Chr1:83360530-83360549 MsG0180004834.01.T01:intron 30.0%
! TATTTCAGGTGAAAAAGTAC+AGG - Chr1:83363330-83363349 MsG0180004834.01.T01:intron 30.0%
! TCTTACATTGGCTAGAAATA+AGG - Chr1:83361702-83361721 MsG0180004834.01.T01:intron 30.0%
! TCTTTACATCCCATATCTTT+TGG - Chr1:83361582-83361601 MsG0180004834.01.T01:intron 30.0%
! TTAGTATTTGGTTCCTTGTT+TGG - Chr1:83360529-83360548 MsG0180004834.01.T01:intron 30.0%
! TTTGGCTAATTTGTAGGTTT+GGG + Chr1:83362802-83362821 None:intergenic 30.0%
! TTTTCTTCTTTGATTGAAGG+GGG + Chr1:83359436-83359455 None:intergenic 30.0%
!! CCTTTTGCTGTAAATTGTAA+TGG - Chr1:83360627-83360646 MsG0180004834.01.T01:intron 30.0%
!! TGATGGACCTTAATTTTGTA+TGG - Chr1:83360483-83360502 MsG0180004834.01.T01:intron 30.0%
!! TGGGTTGAGTTTTATATTTC+AGG - Chr1:83363316-83363335 MsG0180004834.01.T01:intron 30.0%
!!! ATTAGGGTTTTAATTTTCGG+GGG + Chr1:83359374-83359393 None:intergenic 30.0%
!!! TCAAGGTTTGCTAATGTTTT+TGG - Chr1:83358750-83358769 MsG0180004834.01.T01:CDS 30.0%
AAACTCCATTCAATTCTCGA+TGG - Chr1:83358977-83358996 MsG0180004834.01.T01:intron 35.0%
AAATGTTGGACCATCAATAC+GGG - Chr1:83359016-83359035 MsG0180004834.01.T01:intron 35.0%
AACACTACAAATGCATAGCA+AGG + Chr1:83359593-83359612 None:intergenic 35.0%
AAGATATGGGATGTAAAGAC+AGG + Chr1:83361581-83361600 None:intergenic 35.0%
AAGCCAAGATTTACCATCTT+TGG + Chr1:83363612-83363631 None:intergenic 35.0%
AAGCTAGAAGCTCATTTATG+TGG + Chr1:83361970-83361989 None:intergenic 35.0%
AATGCTAGAAGATGATGAAG+AGG + Chr1:83362416-83362435 None:intergenic 35.0%
ACACTACAAATGCATAGCAA+GGG + Chr1:83359592-83359611 None:intergenic 35.0%
ACTAGTAAAGATGTGGATGA+TGG - Chr1:83360355-83360374 MsG0180004834.01.T01:intron 35.0%
AGCCAAGATTTACCATCTTT+GGG + Chr1:83363611-83363630 None:intergenic 35.0%
ATCCCAAAGATGGTAAATCT+TGG - Chr1:83363606-83363625 MsG0180004834.01.T01:CDS 35.0%
ATCTAGTGGAAAACTGATCA+AGG - Chr1:83361356-83361375 MsG0180004834.01.T01:intron 35.0%
ATTCTCGATGGAATTGGAAA+CGG - Chr1:83359132-83359151 MsG0180004834.01.T01:intron 35.0%
CAAACCTTGAGATTGACATT+TGG + Chr1:83358740-83358759 None:intergenic 35.0%
CAAGATGCACTAAGATTTCA+AGG + Chr1:83361052-83361071 None:intergenic 35.0%
CAATTCCATCGAGAATTGAA+TGG + Chr1:83359128-83359147 None:intergenic 35.0%
CAGTCATATAAGGTAATACC+AGG + Chr1:83362826-83362845 None:intergenic 35.0%
CATTCAATTCTCGATGGAAT+TGG - Chr1:83359126-83359145 MsG0180004834.01.T01:intron 35.0%
CGATACAGTATTCACAACAA+TGG - Chr1:83359731-83359750 MsG0180004834.01.T01:intron 35.0%
CGTGTTTACGTTAAACAGAA+TGG - Chr1:83360681-83360700 MsG0180004834.01.T01:intron 35.0%
CTCTTTCATTTCACGTTTCT+GGG - Chr1:83362201-83362220 MsG0180004834.01.T01:CDS 35.0%
CTTTATCAAGACCACAATCA+AGG - Chr1:83360218-83360237 MsG0180004834.01.T01:intron 35.0%
GAATATCGTGTTCTAGTCAA+TGG - Chr1:83359785-83359804 MsG0180004834.01.T01:intron 35.0%
GACTGACATACAGTCATATA+AGG + Chr1:83362836-83362855 None:intergenic 35.0%
GAGAAGATTAAGGGCAAAAA+TGG + Chr1:83362184-83362203 None:intergenic 35.0%
GATTCTCTAGTTGAAATACG+GGG - Chr1:83359097-83359116 MsG0180004834.01.T01:intron 35.0%
GCTCTGTTTGGTAAAAATAG+CGG + Chr1:83362725-83362744 None:intergenic 35.0%
GTCTATCCTAGACACATTAT+TGG - Chr1:83361818-83361837 MsG0180004834.01.T01:intron 35.0%
GTTATAGCATTCCATTTGGT+TGG - Chr1:83361200-83361219 MsG0180004834.01.T01:intron 35.0%
TAAAGAACAGGATCTAGATC+TGG + Chr1:83360203-83360222 None:intergenic 35.0%
TAGAACTTATAGGGTCTGTT+TGG - Chr1:83361940-83361959 MsG0180004834.01.T01:CDS 35.0%
TATAAGACACGGTTAAACTC+TGG + Chr1:83358710-83358729 None:intergenic 35.0%
TATAAGGTAATACCAGGGTT+TGG + Chr1:83362820-83362839 None:intergenic 35.0%
TCTCTTTCATTTCACGTTTC+TGG - Chr1:83362200-83362219 MsG0180004834.01.T01:CDS 35.0%
TGAAGATTGCCTAGACATTA+TGG + Chr1:83362747-83362766 None:intergenic 35.0%
TGCAAAATTATCTTCCACTG+CGG + Chr1:83359175-83359194 None:intergenic 35.0%
TGGCTGAGAAACACTTATTT+GGG - Chr1:83360419-83360438 MsG0180004834.01.T01:intron 35.0%
TTAGTTCATGGCTAATTTGG+TGG + Chr1:83361845-83361864 None:intergenic 35.0%
TTCACCACTTTGTATTCTGT+AGG - Chr1:83361272-83361291 MsG0180004834.01.T01:intron 35.0%
TTCAGCTATTACTCCATATC+TGG + Chr1:83362883-83362902 None:intergenic 35.0%
TTCTTCCCCTATAATGAGAA+GGG + Chr1:83360057-83360076 None:intergenic 35.0%
TTGGCTGAGAAACACTTATT+TGG - Chr1:83360418-83360437 MsG0180004834.01.T01:intron 35.0%
TTGGGCGAATATATAAGACA+CGG + Chr1:83358721-83358740 None:intergenic 35.0%
! ATATCTAGCTTGAATCAGGT+GGG - Chr1:83360724-83360743 MsG0180004834.01.T01:intron 35.0%
! ATGGTTTGTGTTTATTTCGG+CGG - Chr1:83360646-83360665 MsG0180004834.01.T01:intron 35.0%
! CATAACTCGCATTGATCTAA+AGG - Chr1:83359553-83359572 MsG0180004834.01.T01:intron 35.0%
! CATCTTTTTGCAAAAAGGCA+AGG - Chr1:83359244-83359263 MsG0180004834.01.T01:intron 35.0%
! CTTTTATTACGCAGAGGTAA+TGG + Chr1:83360253-83360272 None:intergenic 35.0%
! GATAAGCTAGTTGAAGTGTT+TGG + Chr1:83362630-83362649 None:intergenic 35.0%
! GTTCCTTGTTTGGGTTTATT+TGG - Chr1:83360539-83360558 MsG0180004834.01.T01:intron 35.0%
! GTTTGGCTAATTTGTAGGTT+TGG + Chr1:83362803-83362822 None:intergenic 35.0%
! TAAAGTCTCCTTTTGTGTGT+TGG + Chr1:83359213-83359232 None:intergenic 35.0%
! TATATCTAGCTTGAATCAGG+TGG - Chr1:83360723-83360742 MsG0180004834.01.T01:intron 35.0%
! TCTATCCTATGGGTTAATGT+AGG - Chr1:83361499-83361518 MsG0180004834.01.T01:CDS 35.0%
! TGTGATGGCTATGATTTTGA+TGG - Chr1:83359650-83359669 MsG0180004834.01.T01:intron 35.0%
! TTGACAAAAGTAGCTCTGTT+TGG - Chr1:83362014-83362033 MsG0180004834.01.T01:CDS 35.0%
! TTGGCTAATTTGTAGGTTTG+GGG + Chr1:83362801-83362820 None:intergenic 35.0%
! TTGTGGTCTTGATAAAGAAC+AGG + Chr1:83360215-83360234 None:intergenic 35.0%
! TTTTGTCCAATCACTAGTGT+GGG - Chr1:83361459-83361478 MsG0180004834.01.T01:intron 35.0%
! TTTTTGTCCAATCACTAGTG+TGG - Chr1:83361458-83361477 MsG0180004834.01.T01:intron 35.0%
!! AGAGGGTATTCAACAAAAAG+AGG + Chr1:83359349-83359368 None:intergenic 35.0%
!! ATCATCTTCTAGCATTGACA+AGG - Chr1:83362420-83362439 MsG0180004834.01.T01:CDS 35.0%
!! ATTTTGATGGGTGCCAATTA+CGG - Chr1:83359663-83359682 MsG0180004834.01.T01:intron 35.0%
!! GTGATGGCTATGATTTTGAT+GGG - Chr1:83359651-83359670 MsG0180004834.01.T01:intron 35.0%
!! TAGAGAAGTATCCAACCAAA+TGG + Chr1:83361214-83361233 None:intergenic 35.0%
!! TCATCTTCTAGCATTGACAA+GGG - Chr1:83362421-83362440 MsG0180004834.01.T01:CDS 35.0%
!! TCCTCTATAGTTGATAGATG+CGG + Chr1:83359293-83359312 None:intergenic 35.0%
!!! TGACACTTTTCAGGTTTTTG+AGG - Chr1:83358875-83358894 MsG0180004834.01.T01:CDS 35.0%
AAAAGGAGACTTTACTACCC+TGG - Chr1:83359219-83359238 MsG0180004834.01.T01:intron 40.0%
AAAATCTCAGGGCAAGGATT+TGG - Chr1:83362908-83362927 MsG0180004834.01.T01:intron 40.0%
AAAATGCTAACAAGTGCCCT+AGG - Chr1:83358801-83358820 MsG0180004834.01.T01:CDS 40.0%
AAAGGAGACTTTACTACCCT+GGG - Chr1:83359220-83359239 MsG0180004834.01.T01:intron 40.0%
AAATGCTAACAAGTGCCCTA+GGG - Chr1:83358802-83358821 MsG0180004834.01.T01:CDS 40.0%
AACACGATATTCAGAGTGAC+TGG + Chr1:83359777-83359796 None:intergenic 40.0%
AACCCACTCCCAAAAGATAT+GGG + Chr1:83361594-83361613 None:intergenic 40.0%
AACTTCAGCCAACACACAAA+AGG - Chr1:83359202-83359221 MsG0180004834.01.T01:intron 40.0%
AAGGTCCATCAAATTCCTCA+AGG + Chr1:83360474-83360493 None:intergenic 40.0%
AATAATTGGGATTGAGTGGG+TGG + Chr1:83362276-83362295 None:intergenic 40.0%
AATGCTGACGATGCAATTTG+TGG - Chr1:83359626-83359645 MsG0180004834.01.T01:intron 40.0%
ACTACAAATGCATAGCAAGG+GGG + Chr1:83359590-83359609 None:intergenic 40.0%
AGCCAAAGCAAATTTCCCAA+GGG - Chr1:83360130-83360149 MsG0180004834.01.T01:intron 40.0%
AGTAACAATCAGAGCTTACC+TGG + Chr1:83360338-83360357 None:intergenic 40.0%
AGTATTCACAACAATGGCCA+GGG - Chr1:83359737-83359756 MsG0180004834.01.T01:intron 40.0%
AGTCTAACTCAGACTGTGTA+AGG + Chr1:83363457-83363476 None:intergenic 40.0%
ATGCTGACGATGCAATTTGT+GGG - Chr1:83359627-83359646 MsG0180004834.01.T01:intron 40.0%
CAAAATTATCTTCCACTGCG+GGG + Chr1:83359173-83359192 None:intergenic 40.0%
CAAACAGAGCCATAATGTCT+AGG - Chr1:83362735-83362754 MsG0180004834.01.T01:CDS 40.0%
CACAACTCACTCTATCCTAT+GGG - Chr1:83361489-83361508 MsG0180004834.01.T01:CDS 40.0%
CACTACAAATGCATAGCAAG+GGG + Chr1:83359591-83359610 None:intergenic 40.0%
CTAATTCTTCCAAGCTCTTG+CGG - Chr1:83359389-83359408 MsG0180004834.01.T01:intron 40.0%
CTATAAGCTCAAACGCTACT+TGG + Chr1:83362107-83362126 None:intergenic 40.0%
CTTCTTCCCCTATAATGAGA+AGG + Chr1:83360058-83360077 None:intergenic 40.0%
CTTGTTAAGGAAGCCAACAA+AGG - Chr1:83358837-83358856 MsG0180004834.01.T01:CDS 40.0%
CTTTGATTGAAGGGGGAAAT+GGG + Chr1:83359429-83359448 None:intergenic 40.0%
GAACGAGAAACTAATCTTGC+TGG + Chr1:83360175-83360194 None:intergenic 40.0%
GCAAAATTATCTTCCACTGC+GGG + Chr1:83359174-83359193 None:intergenic 40.0%
GCAAGAGCTTGGAAGAATTA+GGG + Chr1:83359390-83359409 None:intergenic 40.0%
TAGCCAAAGCAAATTTCCCA+AGG - Chr1:83360129-83360148 MsG0180004834.01.T01:intron 40.0%
TCACAACTCACTCTATCCTA+TGG - Chr1:83361488-83361507 MsG0180004834.01.T01:CDS 40.0%
TCGTGACCCTTCTCATTATA+GGG - Chr1:83360048-83360067 MsG0180004834.01.T01:intron 40.0%
TCTCATCATTTCAACTGGAC+AGG + Chr1:83362986-83363005 None:intergenic 40.0%
TCTGATGTCCAATTCTGCTT+AGG + Chr1:83358617-83358636 None:intergenic 40.0%
TCTTTGATTGAAGGGGGAAA+TGG + Chr1:83359430-83359449 None:intergenic 40.0%
TGAGCAGAACTGTCTATGTT+GGG - Chr1:83359471-83359490 MsG0180004834.01.T01:intron 40.0%
TGGTCCTACAGAATACAAAG+TGG + Chr1:83361279-83361298 None:intergenic 40.0%
TGTATGTCAGTCTGAGTTTG+CGG - Chr1:83362844-83362863 MsG0180004834.01.T01:intron 40.0%
TTAGGCCTTGAGGAATTTGA+TGG - Chr1:83360466-83360485 MsG0180004834.01.T01:intron 40.0%
TTGAGCAGAACTGTCTATGT+TGG - Chr1:83359470-83359489 MsG0180004834.01.T01:intron 40.0%
TTTGATTGAAGGGGGAAATG+GGG + Chr1:83359428-83359447 None:intergenic 40.0%
! AAGATGTGGATGATGGTTAG+TGG - Chr1:83360362-83360381 MsG0180004834.01.T01:intron 40.0%
! AATTTGCTTTGGCTATGTCC+TGG + Chr1:83360124-83360143 None:intergenic 40.0%
! ATGGAGTTTTCCCGTATTGA+TGG + Chr1:83359029-83359048 None:intergenic 40.0%
! CTAGACATTATGGCTCTGTT+TGG + Chr1:83362737-83362756 None:intergenic 40.0%
! GGCTATATCTAGCTTGAATC+AGG - Chr1:83360720-83360739 MsG0180004834.01.T01:intron 40.0%
! TACCCTTGGGAAATTTGCTT+TGG + Chr1:83360135-83360154 None:intergenic 40.0%
! TGAATGGAGTTTTCGACTAG+AGG + Chr1:83358969-83358988 None:intergenic 40.0%
! TTTTCCCAGGTTGTTCATGA+TGG - Chr1:83359872-83359891 MsG0180004834.01.T01:intron 40.0%
! TTTTGCAAAAAGATGCCCCA+GGG + Chr1:83359239-83359258 None:intergenic 40.0%
! TTTTTGCAAAAAGATGCCCC+AGG + Chr1:83359240-83359259 None:intergenic 40.0%
!! AGCGACTCTTTGAAGTTTGA+CGG + Chr1:83361312-83361331 None:intergenic 40.0%
!! ATCCCATATCTTTTGGGAGT+GGG - Chr1:83361589-83361608 MsG0180004834.01.T01:intron 40.0%
!! TCTATAGTTGATAGATGCGG+CGG + Chr1:83359290-83359309 None:intergenic 40.0%
!! TGGGGCATCTTTTTGCAAAA+AGG - Chr1:83359239-83359258 MsG0180004834.01.T01:intron 40.0%
!! TGGGTGGTTCTAATGAAACA+AGG - Chr1:83360743-83360762 MsG0180004834.01.T01:intron 40.0%
!! TTTAATTTTCGGGGGTGAGA+GGG + Chr1:83359366-83359385 None:intergenic 40.0%
!! TTTTGATGGGTGCCAATTAC+GGG - Chr1:83359664-83359683 MsG0180004834.01.T01:intron 40.0%
!!! TTTTAATTTTCGGGGGTGAG+AGG + Chr1:83359367-83359386 None:intergenic 40.0%
AAAGCTGGAGTTGTCAAGCA+CGG - Chr1:83358653-83358672 MsG0180004834.01.T01:CDS 45.0%
AAGCTTATGTAGCAGCTGCA+GGG - Chr1:83363561-83363580 MsG0180004834.01.T01:CDS 45.0%
AAGGAGACTTTACTACCCTG+GGG - Chr1:83359221-83359240 MsG0180004834.01.T01:intron 45.0%
AAGGATCACATGCGAAAAGC+AGG - Chr1:83359839-83359858 MsG0180004834.01.T01:intron 45.0%
AATGCTAACAAGTGCCCTAG+GGG - Chr1:83358803-83358822 MsG0180004834.01.T01:CDS 45.0%
ACCTGGACAAACTCTTGCTA+CGG + Chr1:83360321-83360340 None:intergenic 45.0%
ACGTTGTGAGGATTTACCCT+TGG + Chr1:83360149-83360168 None:intergenic 45.0%
AGGATCACATGCGAAAAGCA+GGG - Chr1:83359840-83359859 MsG0180004834.01.T01:intron 45.0%
AGTGGAAATTGGGCCAGATA+TGG - Chr1:83362867-83362886 MsG0180004834.01.T01:intron 45.0%
ATCCCTGTCACAGTTCATAG+AGG + Chr1:83363423-83363442 None:intergenic 45.0%
ATGCCTCTATGAACTGTGAC+AGG - Chr1:83363417-83363436 MsG0180004834.01.T01:intron 45.0%
CAGTATTCACAACAATGGCC+AGG - Chr1:83359736-83359755 MsG0180004834.01.T01:intron 45.0%
CCAAAGAAGAACGTGTGTGT+TGG - Chr1:83362504-83362523 MsG0180004834.01.T01:CDS 45.0%
CCAACACACACGTTCTTCTT+TGG + Chr1:83362507-83362526 None:intergenic 45.0%
CCTACAAATTAGCCAAACCC+TGG - Chr1:83362805-83362824 MsG0180004834.01.T01:intron 45.0%
CCTTCCATCATGAACAACCT+GGG + Chr1:83359879-83359898 None:intergenic 45.0%
CGCAAGAGCTTGGAAGAATT+AGG + Chr1:83359391-83359410 None:intergenic 45.0%
CGTGACCCTTCTCATTATAG+GGG - Chr1:83360049-83360068 MsG0180004834.01.T01:intron 45.0%
CGTTGTGAGGATTTACCCTT+GGG + Chr1:83360148-83360167 None:intergenic 45.0%
CTCCACCAAACCAACTTCTA+AGG + Chr1:83361763-83361782 None:intergenic 45.0%
CTGAAGTCTCTCACATCTAG+TGG - Chr1:83361342-83361361 MsG0180004834.01.T01:intron 45.0%
CTTAGTGCATCTTGAGCCTT+AGG - Chr1:83361058-83361077 MsG0180004834.01.T01:intron 45.0%
CTTTCTGGATATGCTGAGGT+AGG + Chr1:83363362-83363381 None:intergenic 45.0%
GAACCCACTCCCAAAAGATA+TGG + Chr1:83361595-83361614 None:intergenic 45.0%
GAGTTTGCGGAGTGGAAATT+GGG - Chr1:83362857-83362876 MsG0180004834.01.T01:intron 45.0%
GATGCAATTTGTGGGTGTGA+TGG - Chr1:83359635-83359654 MsG0180004834.01.T01:intron 45.0%
GATTCCTTAACAAGTTCCCC+TGG - Chr1:83358937-83358956 MsG0180004834.01.T01:intron 45.0%
GCAATCCTCACCTTAGAAGT+TGG - Chr1:83361750-83361769 MsG0180004834.01.T01:intron 45.0%
GCAGAATTGGACATCAGAAG+AGG - Chr1:83358619-83358638 MsG0180004834.01.T01:CDS 45.0%
GCATGTGATCCTTAAGATCC+TGG + Chr1:83359832-83359851 None:intergenic 45.0%
GCCGCATCTATCAACTATAG+AGG - Chr1:83359289-83359308 MsG0180004834.01.T01:intron 45.0%
GCTAGAAGATGATGAAGAGG+AGG + Chr1:83362413-83362432 None:intergenic 45.0%
GCTCACATTGGTGTGAGATA+AGG - Chr1:83361911-83361930 MsG0180004834.01.T01:intron 45.0%
GGATTTGGAGAGAGACTGAA+AGG - Chr1:83362923-83362942 MsG0180004834.01.T01:intron 45.0%
GGGAGAAACAATCCCAAAGA+TGG - Chr1:83363596-83363615 MsG0180004834.01.T01:CDS 45.0%
GGTGATTGTCTTGCTCTTTC+TGG + Chr1:83363377-83363396 None:intergenic 45.0%
GTCGTGACCCTTCTCATTAT+AGG - Chr1:83360047-83360066 MsG0180004834.01.T01:intron 45.0%
GTCTATGTTGGGAATCTACC+TGG - Chr1:83359482-83359501 MsG0180004834.01.T01:intron 45.0%
GTGCTCCTACATTAACCCAT+AGG + Chr1:83361507-83361526 None:intergenic 45.0%
GTGTGAGGGAATATGATTCG+AGG - Chr1:83360005-83360024 MsG0180004834.01.T01:intron 45.0%
TCAGGCCCAAAAACACAAGA+TGG - Chr1:83361788-83361807 MsG0180004834.01.T01:intron 45.0%
TCGCCCAAATGTCAATCTCA+AGG - Chr1:83358733-83358752 MsG0180004834.01.T01:CDS 45.0%
TGAGGGAATATGATTCGAGG+CGG - Chr1:83360008-83360027 MsG0180004834.01.T01:intron 45.0%
TGAGTTTGCGGAGTGGAAAT+TGG - Chr1:83362856-83362875 MsG0180004834.01.T01:intron 45.0%
TGCCTCTATGAACTGTGACA+GGG - Chr1:83363418-83363437 MsG0180004834.01.T01:intron 45.0%
TGCTCTTTCTGGATATGCTG+AGG + Chr1:83363366-83363385 None:intergenic 45.0%
TGTATTCTGTAGGACCACCA+CGG - Chr1:83361282-83361301 MsG0180004834.01.T01:intron 45.0%
TTCCTTAACAAGTGCCCCTA+GGG + Chr1:83358829-83358848 None:intergenic 45.0%
TTCTGCAGCTTCCTCTATGA+GGG + Chr1:83363543-83363562 None:intergenic 45.0%
TTGATCTAAAGGTTCCGCCA+AGG - Chr1:83359564-83359583 MsG0180004834.01.T01:intron 45.0%
TTGGACATCAGAAGAGGAAG+CGG - Chr1:83358625-83358644 MsG0180004834.01.T01:CDS 45.0%
! AGCGACATTTGAAGCACCTA+AGG + Chr1:83361077-83361096 None:intergenic 45.0%
! ATGATGGAAGGGCTACTACT+GGG - Chr1:83359888-83359907 MsG0180004834.01.T01:intron 45.0%
! CCAGGGTTTGGCTAATTTGT+AGG + Chr1:83362808-83362827 None:intergenic 45.0%
! CCAGGTTGTTCATGATGGAA+GGG - Chr1:83359877-83359896 MsG0180004834.01.T01:intron 45.0%
! CCTCACCTTAGAAGTTGGTT+TGG - Chr1:83361755-83361774 MsG0180004834.01.T01:intron 45.0%
! TTGGGGCTTTTATTACGCAG+AGG + Chr1:83360259-83360278 None:intergenic 45.0%
!! AAGACCTGGAAAAAGCGTTC+CGG + Chr1:83359979-83359998 None:intergenic 45.0%
!! CACCTTAGAAGTTGGTTTGG+TGG - Chr1:83361758-83361777 MsG0180004834.01.T01:intron 45.0%
!! CATCCCATATCTTTTGGGAG+TGG - Chr1:83361588-83361607 MsG0180004834.01.T01:intron 45.0%
!! CCAAACCAACTTCTAAGGTG+AGG + Chr1:83361758-83361777 None:intergenic 45.0%
!! CGACTCTTTGAAGTTTGACG+GGG + Chr1:83361310-83361329 None:intergenic 45.0%
!! CTATAGTTGATAGATGCGGC+GGG + Chr1:83359289-83359308 None:intergenic 45.0%
!! CTGCTAGCACTGTGCTTTTT+GGG + Chr1:83360277-83360296 None:intergenic 45.0%
!! GCGACTCTTTGAAGTTTGAC+GGG + Chr1:83361311-83361330 None:intergenic 45.0%
!! TGCTAGCACTGTGCTTTTTG+GGG + Chr1:83360276-83360295 None:intergenic 45.0%
!! TGGTTTGGTGGAGTTGAATC+AGG - Chr1:83361770-83361789 MsG0180004834.01.T01:intron 45.0%
!! TGTTGCTTTGATACAGCTGC+TGG - Chr1:83363059-83363078 MsG0180004834.01.T01:intron 45.0%
!! TTCTAAGGTGAGGATTGCCA+AGG + Chr1:83361748-83361767 None:intergenic 45.0%
!!! GGTGCTTCAAATGTCGCTTT+TGG - Chr1:83361079-83361098 MsG0180004834.01.T01:intron 45.0%
AAGCTGGAGTTGTCAAGCAC+GGG - Chr1:83358654-83358673 MsG0180004834.01.T01:CDS 50.0%
AAGGGCTACTACTGGGATTG+TGG - Chr1:83359895-83359914 MsG0180004834.01.T01:intron 50.0%
AATGTCCGTGTCTGCACAAG+AGG - Chr1:83363493-83363512 MsG0180004834.01.T01:intron 50.0%
AGACAATCACCCGTGTTGGA+AGG - Chr1:83363386-83363405 MsG0180004834.01.T01:intron 50.0%
AGCAAGACAATCACCCGTGT+TGG - Chr1:83363382-83363401 MsG0180004834.01.T01:intron 50.0%
AGCTTATGTAGCAGCTGCAG+GGG - Chr1:83363562-83363581 MsG0180004834.01.T01:CDS 50.0%
ATTCACAACAATGGCCAGGG+TGG - Chr1:83359740-83359759 MsG0180004834.01.T01:intron 50.0%
ATTCTGCCTCCCTTCCAACA+CGG + Chr1:83363399-83363418 None:intergenic 50.0%
CAAGACCACAATCAAGGCCT+AGG - Chr1:83360224-83360243 MsG0180004834.01.T01:intron 50.0%
CAGGTCTTACGTTCGTGTGA+GGG - Chr1:83359991-83360010 MsG0180004834.01.T01:intron 50.0%
CCCTTCCATCATGAACAACC+TGG + Chr1:83359880-83359899 None:intergenic 50.0%
CTTCCTTAACAAGTGCCCCT+AGG + Chr1:83358830-83358849 None:intergenic 50.0%
CTTCTGCAGCTTCCTCTATG+AGG + Chr1:83363544-83363563 None:intergenic 50.0%
GAAGCTTATGTAGCAGCTGC+AGG - Chr1:83363560-83363579 MsG0180004834.01.T01:CDS 50.0%
GACAATCACCCGTGTTGGAA+GGG - Chr1:83363387-83363406 MsG0180004834.01.T01:intron 50.0%
GAGGAAGCGGTGATTAAAGC+TGG - Chr1:83358638-83358657 MsG0180004834.01.T01:CDS 50.0%
GAGGGAATATGATTCGAGGC+GGG - Chr1:83360009-83360028 MsG0180004834.01.T01:intron 50.0%
GGATCACATGCGAAAAGCAG+GGG - Chr1:83359841-83359860 MsG0180004834.01.T01:intron 50.0%
GGCTTCCACTTCAGCAAATG+TGG + Chr1:83363522-83363541 None:intergenic 50.0%
GGTGGCCCAATAATGTGTCT+AGG + Chr1:83361827-83361846 None:intergenic 50.0%
GTATTCTGTAGGACCACCAC+GGG - Chr1:83361283-83361302 MsG0180004834.01.T01:intron 50.0%
GTGATCCTTAAGATCCTGGC+AGG + Chr1:83359828-83359847 None:intergenic 50.0%
TCTCTTTCACGGATATCGCC+AGG + Chr1:83359503-83359522 None:intergenic 50.0%
TCTTGCTGGTGAACGTTGTG+AGG + Chr1:83360161-83360180 None:intergenic 50.0%
TGAAGTGGAAGCCCTCATAG+AGG - Chr1:83363529-83363548 MsG0180004834.01.T01:CDS 50.0%
TGCATCCTGCCAGGATCTTA+AGG - Chr1:83359820-83359839 MsG0180004834.01.T01:intron 50.0%
TGGGTGCTCCTAAGCAGAAT+TGG - Chr1:83358606-83358625 MsG0180004834.01.T01:CDS 50.0%
TTGAAGGGGGAAATGGGGAT+CGG + Chr1:83359423-83359442 None:intergenic 50.0%
TTTGCGAATTAACCCCGCAG+TGG - Chr1:83359158-83359177 MsG0180004834.01.T01:intron 50.0%
! ACAGCTGCTGGTTGTGAGTT+TGG - Chr1:83363071-83363090 MsG0180004834.01.T01:intron 50.0%
! ACCTTGCAAGTCGCTTTGTG+GGG - Chr1:83362766-83362785 MsG0180004834.01.T01:CDS 50.0%
! CACCTTGCAAGTCGCTTTGT+GGG - Chr1:83362765-83362784 MsG0180004834.01.T01:CDS 50.0%
! CAGCTGCTGGTTGTGAGTTT+GGG - Chr1:83363072-83363091 MsG0180004834.01.T01:intron 50.0%
! CATGATGGAAGGGCTACTAC+TGG - Chr1:83359887-83359906 MsG0180004834.01.T01:intron 50.0%
! CCAAAAAGCACAGTGCTAGC+AGG - Chr1:83360275-83360294 MsG0180004834.01.T01:intron 50.0%
! CCCAGGTTGTTCATGATGGA+AGG - Chr1:83359876-83359895 MsG0180004834.01.T01:intron 50.0%
! CCTGCTAGCACTGTGCTTTT+TGG + Chr1:83360278-83360297 None:intergenic 50.0%
! TCACCTTGCAAGTCGCTTTG+TGG - Chr1:83362764-83362783 MsG0180004834.01.T01:CDS 50.0%
! TCTAGCTTGAATCAGGTGGG+TGG - Chr1:83360727-83360746 MsG0180004834.01.T01:intron 50.0%
!! AGGGGATGTTTGCTTTTCCC+AGG - Chr1:83359859-83359878 MsG0180004834.01.T01:intron 50.0%
!! CTTGCCAGGGGAACTTGTTA+AGG + Chr1:83358944-83358963 None:intergenic 50.0%
!!! AGTTCCGGAACGCTTTTTCC+AGG - Chr1:83359972-83359991 MsG0180004834.01.T01:intron 50.0%
AATCACCCGTGTTGGAAGGG+AGG - Chr1:83363390-83363409 MsG0180004834.01.T01:intron 55.0%
AATGCATAGCAAGGGGGCCT+TGG + Chr1:83359584-83359603 None:intergenic 55.0%
ACCCCACAAAGCGACTTGCA+AGG + Chr1:83362770-83362789 None:intergenic 55.0%
AGCTGCAGGGGAAAGACTGA+AGG - Chr1:83363574-83363593 MsG0180004834.01.T01:CDS 55.0%
AGCTGGAGTTGTCAAGCACG+GGG - Chr1:83358655-83358674 MsG0180004834.01.T01:CDS 55.0%
ATCCTGGCAGGATGCAGAAG+AGG + Chr1:83359816-83359835 None:intergenic 55.0%
CCAGGTCTTACGTTCGTGTG+AGG - Chr1:83359990-83360009 MsG0180004834.01.T01:intron 55.0%
CCTCACACGAACGTAAGACC+TGG + Chr1:83359993-83360012 None:intergenic 55.0%
CGTGCACCCACACTAGTGAT+TGG + Chr1:83361468-83361487 None:intergenic 55.0%
CTGCAGGGGAAAGACTGAAG+GGG - Chr1:83363576-83363595 MsG0180004834.01.T01:CDS 55.0%
CTTCTGCCTCTGGGCATCTT+AGG - Chr1:83360448-83360467 MsG0180004834.01.T01:intron 55.0%
GCCGTAGCAAGAGTTTGTCC+AGG - Chr1:83360317-83360336 MsG0180004834.01.T01:intron 55.0%
GCTGCAGGGGAAAGACTGAA+GGG - Chr1:83363575-83363594 MsG0180004834.01.T01:CDS 55.0%
GGAGACCTAGGCCTTGATTG+TGG + Chr1:83360232-83360251 None:intergenic 55.0%
GGGTTGAGACTTCTGCCTCT+GGG - Chr1:83360439-83360458 MsG0180004834.01.T01:intron 55.0%
GTCAGTCTGAGTTTGCGGAG+TGG - Chr1:83362849-83362868 MsG0180004834.01.T01:intron 55.0%
GTGCAGCTTCGACCCGTAAT+TGG + Chr1:83359679-83359698 None:intergenic 55.0%
GTGCTAGCAGGAGTCCAAGT+AGG - Chr1:83360287-83360306 MsG0180004834.01.T01:intron 55.0%
TATGTCCTGGACTGCACCTG+CGG + Chr1:83360111-83360130 None:intergenic 55.0%
TCAAGCACGGGGTGGGTAAA+TGG - Chr1:83358666-83358685 MsG0180004834.01.T01:CDS 55.0%
TCAAGGCCTAAGATGCCCAG+AGG + Chr1:83360457-83360476 None:intergenic 55.0%
TCCTGGCAGGATGCAGAAGA+GGG + Chr1:83359815-83359834 None:intergenic 55.0%
TCTGGGCATCTTAGGCCTTG+AGG - Chr1:83360456-83360475 MsG0180004834.01.T01:intron 55.0%
TGGATATTCCTCGACCACCC+TGG + Chr1:83359757-83359776 None:intergenic 55.0%
TTCTGCCTCCCTTCCAACAC+GGG + Chr1:83363398-83363417 None:intergenic 55.0%
TTGGGATTGAGTGGGTGGAC+TGG + Chr1:83362271-83362290 None:intergenic 55.0%
! AGGCGGGACTCTAGAAGTCT+TGG - Chr1:83360025-83360044 MsG0180004834.01.T01:intron 55.0%
! GGCAGCCACATTTGCTGAAG+TGG - Chr1:83363514-83363533 MsG0180004834.01.T01:CDS 55.0%
! TAGTAGTGTTGGGCGTGAGC+AGG - Chr1:83361868-83361887 MsG0180004834.01.T01:intron 55.0%
! TGCAAGTCGCTTTGTGGGGT+CGG - Chr1:83362770-83362789 MsG0180004834.01.T01:CDS 55.0%
! TGGGTTGAGACTTCTGCCTC+TGG - Chr1:83360438-83360457 MsG0180004834.01.T01:intron 55.0%
!! AGCTTGACGGCTCTGAGTTC+CGG - Chr1:83359957-83359976 MsG0180004834.01.T01:intron 55.0%
!! CGCAGAGGTAATGGAGACCT+AGG + Chr1:83360244-83360263 None:intergenic 55.0%
!! TCGACTAGAGGCACTTGCCA+GGG + Chr1:83358957-83358976 None:intergenic 55.0%
!! TTCGACTAGAGGCACTTGCC+AGG + Chr1:83358958-83358977 None:intergenic 55.0%
AACAATGGCCAGGGTGGTCG+AGG - Chr1:83359746-83359765 MsG0180004834.01.T01:intron 60.0%
AAGGGGGAAATGGGGATCGG+TGG + Chr1:83359420-83359439 None:intergenic 60.0%
CGGGTCGAAGCTGCACATGT+TGG - Chr1:83359683-83359702 MsG0180004834.01.T01:intron 60.0%
CTACGGCTCCTGCTCCTACT+TGG + Chr1:83360304-83360323 None:intergenic 60.0%
GAAGATATAGCCGCAGCCGC+AGG - Chr1:83360074-83360093 MsG0180004834.01.T01:intron 60.0%
GCAGGAGTCCAAGTAGGAGC+AGG - Chr1:83360293-83360312 MsG0180004834.01.T01:intron 60.0%
GGAGTTGTCAAGCACGGGGT+GGG - Chr1:83358659-83358678 MsG0180004834.01.T01:CDS 60.0%
GGCTGCCTCTTGTGCAGACA+CGG + Chr1:83363501-83363520 None:intergenic 60.0%
TGAAGTTTGACGGGGACCCG+TGG + Chr1:83361302-83361321 None:intergenic 60.0%
TGGAGTTGTCAAGCACGGGG+TGG - Chr1:83358658-83358677 MsG0180004834.01.T01:CDS 60.0%
! GCAAGTCGCTTTGTGGGGTC+GGG - Chr1:83362771-83362790 MsG0180004834.01.T01:CDS 60.0%
!! CGACTAGAGGCACTTGCCAG+GGG + Chr1:83358956-83358975 None:intergenic 60.0%
!! GGATTGAGTGGGTGGACTGG+TGG + Chr1:83362268-83362287 None:intergenic 60.0%
!! GGCCCTAGGGGCACTTGTTA+AGG - Chr1:83358824-83358843 MsG0180004834.01.T01:CDS 60.0%
AAGTGCCCCTAGGGCCCCTA+GGG + Chr1:83358820-83358839 None:intergenic 65.0%
AAGTGCCCTAGGGGCCCTAG+GGG - Chr1:83358812-83358831 MsG0180004834.01.T01:CDS 65.0%
ACAAGTGCCCTAGGGGCCCT+AGG - Chr1:83358810-83358829 MsG0180004834.01.T01:CDS 65.0%
AGTTTGACGGGGACCCGTGG+TGG + Chr1:83361299-83361318 None:intergenic 65.0%
CAAGTGCCCTAGGGGCCCTA+GGG - Chr1:83358811-83358830 MsG0180004834.01.T01:CDS 65.0%
GCATAGCAAGGGGGCCTTGG+CGG + Chr1:83359581-83359600 None:intergenic 65.0%
GCCCTCTTCTGCATCCTGCC+AGG - Chr1:83359811-83359830 MsG0180004834.01.T01:intron 65.0%
GTGGCGTGACCGCAAGAGCT+TGG + Chr1:83359401-83359420 None:intergenic 65.0%
! GTCGCTTTGTGGGGTCGGGT+CGG - Chr1:83362775-83362794 MsG0180004834.01.T01:CDS 65.0%
CAAGTGCCCCTAGGGCCCCT+AGG + Chr1:83358821-83358840 None:intergenic 70.0%
CTGGACTGCACCTGCGGCTG+CGG + Chr1:83360105-83360124 None:intergenic 70.0%
CGCAGCCGCAGGTGCAGTCC+AGG - Chr1:83360103-83360122 MsG0180004834.01.T01:intron 75.0%
TGCGGCTGCACCTGCGGCTG+CGG + Chr1:83360087-83360106 None:intergenic 75.0%
TGCGGCTGCGGCTGCACCTG+CGG + Chr1:83360093-83360112 None:intergenic 75.0%
! GCAGGTGCAGCCGCAGCCGC+AGG - Chr1:83360092-83360111 MsG0180004834.01.T01:intron 80.0%
Chromosome Type Strat End Strand Name
Chr1 gene 83358605 83363646 83358605 ID=MsG0180004834.01;Name=MsG0180004834.01
Chr1 mRNA 83358605 83363646 83358605 ID=MsG0180004834.01.T01;Parent=MsG0180004834.01;Name=MsG0180004834.01.T01;_AED=0.49;_eAED=0.51;_QI=0|0.5|0.2|1|0.5|0.6|5|0|522
Chr1 exon 83363497 83363646 83363497 ID=MsG0180004834.01.T01:exon:8954;Parent=MsG0180004834.01.T01
Chr1 exon 83361913 83362802 83361913 ID=MsG0180004834.01.T01:exon:8953;Parent=MsG0180004834.01.T01
Chr1 exon 83361468 83361552 83361468 ID=MsG0180004834.01.T01:exon:8952;Parent=MsG0180004834.01.T01
Chr1 exon 83360857 83360957 83360857 ID=MsG0180004834.01.T01:exon:8951;Parent=MsG0180004834.01.T01
Chr1 exon 83358605 83358947 83358605 ID=MsG0180004834.01.T01:exon:8950;Parent=MsG0180004834.01.T01
Chr1 CDS 83363497 83363646 83363497 ID=MsG0180004834.01.T01:cds;Parent=MsG0180004834.01.T01
Chr1 CDS 83361913 83362802 83361913 ID=MsG0180004834.01.T01:cds;Parent=MsG0180004834.01.T01
Chr1 CDS 83361468 83361552 83361468 ID=MsG0180004834.01.T01:cds;Parent=MsG0180004834.01.T01
Chr1 CDS 83360857 83360957 83360857 ID=MsG0180004834.01.T01:cds;Parent=MsG0180004834.01.T01
Chr1 CDS 83358605 83358947 83358605 ID=MsG0180004834.01.T01:cds;Parent=MsG0180004834.01.T01
Gene Sequence

>MsG0180004834.01.T01

ATGGGTGCTCCTAAGCAGAATTGGACATCAGAAGAGGAAGCGGTGATTAAAGCTGGAGTTGTCAAGCACGGGGTGGGTAAATGGTGTACAATACTCAAGAATCCAGAGTTTAACCGTGTCTTATATATTCGCCCAAATGTCAATCTCAAGAAGAAAAGAATGAGTAGACATTTGAGCAGAACTGTCTATGTTGGGAATCTACCTGGCGATATCCGTGAAAGAGAAGTTAAACATTTGTTTATGAAGTATGGTCACATAACTCGCATTGATCTAAAGGTTCCGCCAAGGCCCCCTTGCTATGCATTTGTAGTGTTTAACGATGCTCTAAATGCTGACGATGCAATTTGTGGGTGTGATGGCTATGATTTTGATGGGTGCCAATTACGGGTCGAAGCTGCACATGTTGGTTATTGTAATTCATCTTCAAGAGATCGATACAGTATTCACAACAATGGCCAGGGTGGTCGAGGAATATCCAGTCACTCTGAATATCGTGTTCTAGTCAATGGACTGCCCTCTTCTGCATCCTGCCAGGATCTTAAGGATCACATGCGAAAAGCAGGGGATGTTTGCTTTTCCCAGGTTGTTCATGATGGAAGGGCTACTACTGGGATTGTGGATTACACGAACTGCGATGATATGAAATATGCTATCAAAAAGCTTGACGGCTCTGAGTTCCGGAACGCTTTTTCCAGGTCTTACGTTCGTGTGAGGGAATATGATTCGAGGCGGGACTCTAGAAGTCTTGGTCGTGACCCTTCTCATTATAGGGGAAGAAGATATAGCCGCAGCCGCAGGTGCAGCCGCAGCCGCAGGTGCAGTCCAGGACATAGCCAAAGCAAATTTCCCAAGGGTAAATCCTCACAACGTTCACCAGCAAGATTAGTTTCTCGTTCTCGCTCCAGATCTAGATCCTGTTCTTTATCAAGACCACAATCAAGGCCTAGGTCTCCATTACCTCTGCGTAATAAAAGCCCCAAAAAGCACAGTGCTAGCAGGAGTCCAAGTAGGAGCAGGAGCCGTAGCAAGAGTTTGTCCAGAATGGATAACCTTATAATGGAGGCTATATCTAGCTTGAATCAGGTGGGTGGTTCTAATGAAACAAGGATTGCTAATTTCATAGAGGACCACCACGGGTCCCCGTCAAACTTCAAAGAGTCGCTGTCAGCAAGACTGAAGTCTCTCACATCTAGTGGAAAACTGATCAAGGTAACATGTTTCATTATAGATCATACTCATGGGTTGAGTTTTATATTTCAGGTGAAAAAGTACAGGATTGCGCCTACCTCAGCATATCCAGAAAGAGCAAGACAATCACCCGTGTTGGAAGGGAGGCAGAATGCCTCTATGAACTGTGACAGGGATTTGAGCTATAGCCTTACACAGTCTGAGTTAGACTTTCAATTAGCAATGGTAATGTCCGTGTCTGCACAAGAGGCAGCCACATTTGCTGAAGTGGAAGCCCTCATAGAGGAAGCTGCAGAAGCTTATGTAGCAGCTGCAGGGGAAAGACTGAAGGGGAGAAACAATCCCAAAGATGGTAAATCTTGGCTTTTCCTTCCTTTGTAA
Protein sequence

>MsG0180004834.01.T01

MGAPKQNWTSEEEAVIKAGVVKHGVGKWCTILKNPEFNRVLYIRPNVNLKKKRMSRHLSRTVYVGNLPGDIREREVKHLFMKYGHITRIDLKVPPRPPCYAFVVFNDALNADDAICGCDGYDFDGCQLRVEAAHVGYCNSSSRDRYSIHNNGQGGRGISSHSEYRVLVNGLPSSASCQDLKDHMRKAGDVCFSQVVHDGRATTGIVDYTNCDDMKYAIKKLDGSEFRNAFSRSYVRVREYDSRRDSRSLGRDPSHYRGRRYSRSRRCSRSRRCSPGHSQSKFPKGKSSQRSPARLVSRSRSRSRSCSLSRPQSRPRSPLPLRNKSPKKHSASRSPSRSRSRSKSLSRMDNLIMEAISSLNQVGGSNETRIANFIEDHHGSPSNFKESLSARLKSLTSSGKLIKVTCFIIDHTHGLSFIFQVKKYRIAPTSAYPERARQSPVLEGRQNASMNCDRDLSYSLTQSELDFQLAMVMSVSAQEAATFAEVEALIEEAAEAYVAAAGERLKGRNNPKDGKSWLFLPL*