AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180004985.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004985.01.T01 MTR_1g090720 71.560 218 5 3 36 224 102 291 1.10e-90 275
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004985.01.T01 AT3G10480 39.614 207 47 6 36 213 87 244 7.20e-35 129
MsG0180004985.01.T01 AT3G10490 39.048 210 50 5 36 216 87 247 2.04e-34 127
MsG0180004985.01.T01 AT3G10480 39.130 207 47 6 36 213 87 243 4.91e-34 127
MsG0180004985.01.T01 AT3G10490 42.604 169 27 4 36 167 87 222 1.35e-32 118
MsG0180004985.01.T01 AT3G10480 43.787 169 30 4 36 172 120 255 6.41e-32 122
MsG0180004985.01.T01 AT3G10490 38.235 170 55 4 48 216 27 147 1.98e-26 104
MsG0180004985.01.T01 AT3G10490 38.235 170 55 4 48 216 27 147 1.98e-26 104
MsG0180004985.01.T01 AT5G04410 37.952 166 39 5 36 171 69 200 1.47e-22 95.9

Find 117 sgRNAs with CRISPR-Local

Find 786 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCAATCATTCTAATGTTTC+TGG 0.114557 1:+85239618 MsG0180004985.01.T01:three_prime_UTR
GTTATGTTTACAGTTAATTT+TGG 0.196332 1:+85240090 MsG0180004985.01.T01:three_prime_UTR
AGGTATTGGCTTTGGGTTAT+CGG 0.265100 1:-85239562 None:intergenic
TAAATTTGAGGTATTGGCTT+TGG 0.265384 1:-85239570 None:intergenic
GATGAGAAATCCTTAGGAAT+TGG 0.306387 1:+85240035 MsG0180004985.01.T01:three_prime_UTR
GGCATCCGGCCTAACAATTT+CGG 0.330467 1:-85229700 None:intergenic
CAGACTTGTTGAGGAAGAAT+TGG 0.330744 1:+85235380 MsG0180004985.01.T01:CDS
GAGCATGGATCCTGACTGTT+AGG 0.340222 1:-85239654 None:intergenic
TCCAGAAACATTAGAATGAT+TGG 0.341328 1:-85239619 None:intergenic
AGTGCATTGGACAAGAAGTA+TGG 0.341837 1:+85235190 MsG0180004985.01.T01:CDS
AGGAAGAATTGGAGAGGGAG+AGG 0.353596 1:+85235391 MsG0180004985.01.T01:CDS
TGGCTTTGGGTTATCGGTTG+GGG 0.354074 1:-85239556 None:intergenic
TTGGCTTTGGGTTATCGGTT+GGG 0.362139 1:-85239557 None:intergenic
AAATTTGAGGTATTGGCTTT+GGG 0.370279 1:-85239569 None:intergenic
AATTGGAGAGGGAGAGGGCT+GGG 0.371112 1:+85235397 MsG0180004985.01.T01:CDS
GAAGGATCAGGAATGGTTCC+TGG 0.374359 1:+85235811 MsG0180004985.01.T01:CDS
GGTGCATACCGTTGTCCATT+TGG 0.375191 1:-85235766 None:intergenic
AAATTAACTGTAAACATAAC+TGG 0.379630 1:-85240087 None:intergenic
GAGAGGGAGAGGGCTGGGGC+TGG 0.382302 1:+85235402 MsG0180004985.01.T01:CDS
GTTGAAGAAGAGTGGGAAGA+AGG 0.405733 1:+85235793 MsG0180004985.01.T01:CDS
ATGAACAGGGCCACTCTTCA+AGG 0.407496 1:+85235226 MsG0180004985.01.T01:CDS
AACACAAAATCATACAGTTT+AGG 0.414440 1:-85235474 None:intergenic
TTGGACAAGAAGTATGGAAA+TGG 0.417128 1:+85235196 MsG0180004985.01.T01:CDS
CTGATGGTAAGAGAACAAAT+TGG 0.417933 1:+85235343 MsG0180004985.01.T01:CDS
TGGCAAATGCCGAAATTGTT+AGG 0.418462 1:+85229691 MsG0180004985.01.T01:CDS
ATTGGCTTTGGGTTATCGGT+TGG 0.426011 1:-85239558 None:intergenic
ACCACCATCTGCGTCTTGAA+TGG 0.427043 1:+85235878 MsG0180004985.01.T01:CDS
GAAGAGTGGGAAGAAGGATC+AGG 0.432033 1:+85235799 MsG0180004985.01.T01:CDS
TCCCACTCTTCTTCAACAAA+AGG 0.434809 1:-85235787 None:intergenic
AGACGCAGATGGTGGTCAAC+AGG 0.437616 1:-85235871 None:intergenic
ATGAGAAATCCTTAGGAATT+GGG 0.438123 1:+85240036 MsG0180004985.01.T01:three_prime_UTR
GGCTGGACCCTCTCAGCCAC+AGG 0.444725 1:+85235419 MsG0180004985.01.T01:CDS
CAAACCCCGGTCATGGCATC+CGG 0.451069 1:-85229714 None:intergenic
TGACAGCAGCAGCAGTTGTC+GGG 0.454117 1:-85239706 None:intergenic
GATGATGATGAGAAATCCTT+AGG 0.454383 1:+85240029 MsG0180004985.01.T01:three_prime_UTR
CAATTTGTTCTCTTACCATC+AGG 0.458211 1:-85235342 None:intergenic
GAGAGTTTCATCACCTGAAA+AGG 0.458798 1:+85239491 MsG0180004985.01.T01:exon
TGGACAAGAAGTATGGAAAT+GGG 0.460782 1:+85235197 MsG0180004985.01.T01:CDS
GCAGACAGAAAATGTTTCTT+CGG 0.462378 1:-85239745 None:intergenic
AATAACATTGGGCCTCCAAA+TGG 0.464203 1:+85235751 MsG0180004985.01.T01:CDS
TCGATTCAAGTGATTCTAGC+AGG 0.464978 1:-85239783 None:intergenic
CGGCATTTGCCAGTTGAGCT+AGG 0.465925 1:-85229680 None:intergenic
AGAAAATGTTTCTTCGGAGC+AGG 0.466898 1:-85239739 None:intergenic
GAATTGGAGAGGGAGAGGGC+TGG 0.467265 1:+85235396 MsG0180004985.01.T01:CDS
TCCACAAGTCCTAGCTCAAC+TGG 0.471191 1:+85229671 MsG0180004985.01.T01:CDS
TTCATTCCACCCTAACAGTC+AGG 0.487133 1:+85239644 MsG0180004985.01.T01:three_prime_UTR
TGATGGTAAGAGAACAAATT+GGG 0.487496 1:+85235344 MsG0180004985.01.T01:CDS
AAAATACCACTCCTGGTCTC+TGG 0.489129 1:-85235165 None:intergenic
GTGACAGCAGCAGCAGTTGT+CGG 0.492417 1:-85239707 None:intergenic
TTTCTCTGTGGATGAGGAGC+AGG 0.494521 1:+85235696 MsG0180004985.01.T01:CDS
GTTAGGCCGGATGCCATGAC+CGG 0.496878 1:+85229708 MsG0180004985.01.T01:CDS
GCCAGTTGAGCTAGGACTTG+TGG 0.498028 1:-85229672 None:intergenic
CAAGCTGAAGACCAGAGACC+AGG 0.500128 1:+85235154 MsG0180004985.01.T01:CDS
TGTGCATTTCTCTGTGGATG+AGG 0.507961 1:+85235690 MsG0180004985.01.T01:CDS
ATTGGAGAGGGAGAGGGCTG+GGG 0.513068 1:+85235398 MsG0180004985.01.T01:CDS
CACAGAGCTTGGTGTTGAGA+AGG 0.516877 1:+85239912 MsG0180004985.01.T01:three_prime_UTR
TTCTCTTACCATCAGGAGCA+CGG 0.519212 1:-85235335 None:intergenic
AGGAAGAAATCATGTTGTGC+AGG 0.520713 1:+85235924 MsG0180004985.01.T01:CDS
AAGGATCAGGAATGGTTCCT+GGG 0.522130 1:+85235812 MsG0180004985.01.T01:CDS
TTAGGCCGGATGCCATGACC+GGG 0.522162 1:+85229709 MsG0180004985.01.T01:CDS
GGAAGAATTGGAGAGGGAGA+GGG 0.531584 1:+85235392 MsG0180004985.01.T01:CDS
CAATACCTCAAATTTACAAA+AGG 0.532623 1:+85239577 MsG0180004985.01.T01:three_prime_UTR
GCATACCGTTGTCCATTTGG+AGG 0.534396 1:-85235763 None:intergenic
AAATGCCGAAATTGTTAGGC+CGG 0.539011 1:+85229695 MsG0180004985.01.T01:CDS
GGGGCTGAGCCTGTGAGTAA+TGG 0.540169 1:+85235832 MsG0180004985.01.T01:CDS
AGAATCACTTGAATCGAAGA+AGG 0.542425 1:+85239789 MsG0180004985.01.T01:three_prime_UTR
TGTTTCACAAGAATAACATT+GGG 0.544352 1:+85235740 MsG0180004985.01.T01:CDS
TGTTGAGGAAGAATTGGAGA+GGG 0.544892 1:+85235386 MsG0180004985.01.T01:CDS
CGGGGCTCAAACCCCGGTCA+TGG 0.545610 1:-85229721 None:intergenic
CATAGCGGCCGTGCTCCTGA+TGG 0.551844 1:+85235327 MsG0180004985.01.T01:intron
GGCTTTGGGTTATCGGTTGG+GGG 0.551932 1:-85239555 None:intergenic
TTCGCCAGGTCAAAATCTGC+CGG 0.556147 1:-85239831 None:intergenic
GGCAGCTTGTTCACATCAAG+TGG 0.556553 1:-85239424 None:intergenic
GTGTTTCACAAGAATAACAT+TGG 0.558703 1:+85235739 MsG0180004985.01.T01:CDS
GCAGAGTGAGACACAGAGCT+TGG 0.558808 1:+85239901 MsG0180004985.01.T01:three_prime_UTR
AATCTCACCTGTGGCTGAGA+GGG 0.561129 1:-85235426 None:intergenic
GGACTGGAGAATGTTAATCA+TGG 0.565652 1:-85239968 None:intergenic
GAGATCACTCCCAATTCCTA+AGG 0.566456 1:-85240045 None:intergenic
AAATTCTTGCTGTGTGCAAG+AGG 0.567420 1:+85239460 MsG0180004985.01.T01:CDS
TTACTCACAGGCTCAGCCCC+AGG 0.568758 1:-85235829 None:intergenic
TTGTCGCTGCAGTGGTTATG+TGG 0.572584 1:-85239679 None:intergenic
CGGGAGAGTTGTCGCTGCAG+TGG 0.572953 1:-85239687 None:intergenic
AAAACACACCTCAGTTCAGC+CGG 0.573536 1:+85239812 MsG0180004985.01.T01:three_prime_UTR
CTCTGTGGATGAGGAGCAGG+AGG 0.575216 1:+85235699 MsG0180004985.01.T01:CDS
AGCATGGATCCTGACTGTTA+GGG 0.580746 1:-85239653 None:intergenic
TACCTCAAATTTACAAAAGG+CGG 0.580806 1:+85239580 MsG0180004985.01.T01:three_prime_UTR
CGATTCAAGTGATTCTAGCA+GGG 0.581841 1:-85239782 None:intergenic
AACTGGTACATCATCATACA+AGG 0.587563 1:-85240070 None:intergenic
TTGTTGAGGAAGAATTGGAG+AGG 0.590719 1:+85235385 MsG0180004985.01.T01:CDS
GGTGGAGTTTCATGCAGTGA+AGG 0.603535 1:+85235904 MsG0180004985.01.T01:CDS
CGTTCCATTCAAGACGCAGA+TGG 0.604553 1:-85235882 None:intergenic
TTTCCAGTACCCTTGAAGAG+TGG 0.605704 1:-85235236 None:intergenic
CACACGATTCAAGATTCGCC+AGG 0.607792 1:-85239845 None:intergenic
CTCACAGGACCATTACTCAC+AGG 0.609740 1:-85235841 None:intergenic
TCCATTCAAGACGCAGATGG+TGG 0.614300 1:-85235879 None:intergenic
AAATCTCACCTGTGGCTGAG+AGG 0.618188 1:-85235427 None:intergenic
GGACAAGAAGTATGGAAATG+GGG 0.619017 1:+85235198 MsG0180004985.01.T01:CDS
AAAATCTGCCGGCTGAACTG+AGG 0.619043 1:-85239820 None:intergenic
GATGTACTTTGCAACACTCG+AGG 0.619720 1:-85239870 None:intergenic
AGTAATGGTCCTGTGAGTAA+TGG 0.621405 1:+85235847 MsG0180004985.01.T01:CDS
GCATGAGTACAGACTTGTTG+AGG 0.623966 1:+85235371 MsG0180004985.01.T01:CDS
AGTGGTTATGTGGACGAGCA+TGG 0.624310 1:-85239669 None:intergenic
GTGGGAAGAAGGATCAGGAA+TGG 0.625194 1:+85235804 MsG0180004985.01.T01:CDS
AATTCTTGCTGTGTGCAAGA+GGG 0.626389 1:+85239461 MsG0180004985.01.T01:CDS
GACAAGAAGTATGGAAATGG+GGG 0.626774 1:+85235199 MsG0180004985.01.T01:CDS
TGAACAGGGCCACTCTTCAA+GGG 0.626821 1:+85235227 MsG0180004985.01.T01:CDS
AATGTTTCTTCGGAGCAGGT+TGG 0.634124 1:-85239735 None:intergenic
AAATCTCAGCAAAGAGAACG+AGG 0.650884 1:+85239999 MsG0180004985.01.T01:three_prime_UTR
TCAACAGGACCATTACTCAC+AGG 0.652180 1:-85235856 None:intergenic
ATGGATCCTGACTGTTAGGG+TGG 0.663696 1:-85239650 None:intergenic
AGGATCAGGAATGGTTCCTG+GGG 0.666000 1:+85235813 MsG0180004985.01.T01:CDS
CTGCGTCTTGAATGGAACGG+TGG 0.671731 1:+85235886 MsG0180004985.01.T01:CDS
TGAAGACCAGAGACCAGGAG+TGG 0.680892 1:+85235159 MsG0180004985.01.T01:CDS
TAGGCCGGATGCCATGACCG+GGG 0.693088 1:+85229710 MsG0180004985.01.T01:CDS
TTGGGCCTCCAAATGGACAA+CGG 0.705935 1:+85235758 MsG0180004985.01.T01:CDS
AATTTGTAAAATCTCACCTG+TGG 0.706842 1:-85235435 None:intergenic
CATCTGCGTCTTGAATGGAA+CGG 0.724287 1:+85235883 MsG0180004985.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTATATTAATAAAAAAATA+CGG + Chr1:85231624-85231643 MsG0180004985.01.T01:intron 0.0%
!! AATAAGCAAAATATAATTAT+TGG + Chr1:85233989-85234008 MsG0180004985.01.T01:intron 10.0%
!! ATATCAAAATTTATTAGTTA+GGG - Chr1:85236626-85236645 None:intergenic 10.0%
!! ATTTCAAATCATATATAATT+TGG - Chr1:85233673-85233692 None:intergenic 10.0%
!! TAAATATTTACTTAAATATG+TGG - Chr1:85234265-85234284 None:intergenic 10.0%
!! TATATCAAAATTTATTAGTT+AGG - Chr1:85236627-85236646 None:intergenic 10.0%
!! TATTTAAGTAAATATTTAGT+TGG + Chr1:85234267-85234286 MsG0180004985.01.T01:intron 10.0%
!!! ATAATTACTAATTTTGATTT+CGG - Chr1:85231886-85231905 None:intergenic 10.0%
!!! ATTAAAAAAAACATTTTTCA+AGG + Chr1:85234398-85234417 MsG0180004985.01.T01:intron 10.0%
!!! ATTTTTAAAGTTTATTTTTC+TGG + Chr1:85234927-85234946 MsG0180004985.01.T01:intron 10.0%
!!! GTATTTATTTTTTATTTTCA+AGG - Chr1:85237080-85237099 None:intergenic 10.0%
!!! TTTTTAAAGTTTATTTTTCT+GGG + Chr1:85234928-85234947 MsG0180004985.01.T01:intron 10.0%
!! AAAAATTACATTAAAGAGAA+AGG + Chr1:85233456-85233475 MsG0180004985.01.T01:intron 15.0%
!! AAAATTACATTAAAGAGAAA+GGG + Chr1:85233457-85233476 MsG0180004985.01.T01:intron 15.0%
!! AAAGAATTAGAAATTAAAAG+AGG - Chr1:85233917-85233936 None:intergenic 15.0%
!! ACCTAAAAATATAAAATAAG+AGG + Chr1:85234105-85234124 MsG0180004985.01.T01:intron 15.0%
!! ACTACATTAATGATTTATTA+AGG + Chr1:85233644-85233663 MsG0180004985.01.T01:intron 15.0%
!! TAATAACAAATAACAATGAA+TGG + Chr1:85232256-85232275 MsG0180004985.01.T01:intron 15.0%
!! TACATTGTTAAAATATGTAT+AGG - Chr1:85232802-85232821 None:intergenic 15.0%
!!! AAAATTACACATTTTCAAAT+GGG + Chr1:85231664-85231683 MsG0180004985.01.T01:intron 15.0%
!!! AATTGAAAAGATATTCTTTT+AGG - Chr1:85234381-85234400 None:intergenic 15.0%
!!! ACATTTTTAATAAATAAACG+AGG + Chr1:85232598-85232617 MsG0180004985.01.T01:intron 15.0%
!!! AGTTAATTATTTTAATTGCT+AGG + Chr1:85238233-85238252 MsG0180004985.01.T01:intron 15.0%
!!! ATATTTTTAGGTAGTAATTT+TGG - Chr1:85234097-85234116 None:intergenic 15.0%
!!! GATGTATTTGATTTAAAATT+TGG + Chr1:85233742-85233761 MsG0180004985.01.T01:intron 15.0%
!!! GTTAATTATTTTAATTGCTA+GGG + Chr1:85238234-85238253 MsG0180004985.01.T01:intron 15.0%
!!! TAGCATTATTTGTTTTTATT+CGG + Chr1:85236202-85236221 MsG0180004985.01.T01:intron 15.0%
!!! TAGTTTTTTATGATGATTTA+GGG + Chr1:85235058-85235077 MsG0180004985.01.T01:intron 15.0%
!!! TCCTCTTATTTTATATTTTT+AGG - Chr1:85234109-85234128 None:intergenic 15.0%
!!! TTAGTTTTAATTATCGAAAT+GGG + Chr1:85234993-85235012 MsG0180004985.01.T01:intron 15.0%
!!! TTAGTTTTTTATGATGATTT+AGG + Chr1:85235057-85235076 MsG0180004985.01.T01:intron 15.0%
!!! TTATCTTGGTTAAATTTTAA+TGG + Chr1:85235022-85235041 MsG0180004985.01.T01:intron 15.0%
!!! TTTAGTTTTAATTATCGAAA+TGG + Chr1:85234992-85235011 MsG0180004985.01.T01:intron 15.0%
!!! TTTCATATTGCATTTTTTTT+TGG - Chr1:85229801-85229820 None:intergenic 15.0%
!! AAAAAAGTAAAATTCATGAC+CGG + Chr1:85236289-85236308 MsG0180004985.01.T01:intron 20.0%
!! AAAAACATATCTCAAATCAA+AGG + Chr1:85233286-85233305 MsG0180004985.01.T01:intron 20.0%
!! AAAAGAAGAAAATACATAAC+TGG - Chr1:85236242-85236261 None:intergenic 20.0%
!! AAATTAACTGTAAACATAAC+TGG - Chr1:85240090-85240109 None:intergenic 20.0%
!! AACATGTTAAATTAAAACTC+CGG - Chr1:85236320-85236339 None:intergenic 20.0%
!! ATTGACTAATTAGTTGTTTA+GGG + Chr1:85238366-85238385 MsG0180004985.01.T01:intron 20.0%
!! CATTGTTATATTATTAAAGC+TGG + Chr1:85235656-85235675 MsG0180004985.01.T01:intron 20.0%
!! TAAACAAATTGCTAAATTAG+TGG - Chr1:85232428-85232447 None:intergenic 20.0%
!! TAACATTATTATTGTACATC+CGG - Chr1:85236358-85236377 None:intergenic 20.0%
!! TAAGTAACAATAGACAATTT+GGG - Chr1:85235588-85235607 None:intergenic 20.0%
!! TATTGCATGTAATAACAATT+GGG + Chr1:85230812-85230831 MsG0180004985.01.T01:intron 20.0%
!! TCTCTTGATTATTAAATAGT+TGG - Chr1:85230282-85230301 None:intergenic 20.0%
!! TGTACAATAATAATGTTATC+CGG + Chr1:85236360-85236379 MsG0180004985.01.T01:intron 20.0%
!! TTAACTTAGAGATAAAAACA+TGG + Chr1:85231926-85231945 MsG0180004985.01.T01:intron 20.0%
!! TTAAGTAACAATAGACAATT+TGG - Chr1:85235589-85235608 None:intergenic 20.0%
!! TTATTGCATGTAATAACAAT+TGG + Chr1:85230811-85230830 MsG0180004985.01.T01:intron 20.0%
!! TTGAAATAAAATGTGTATCT+TGG + Chr1:85233497-85233516 MsG0180004985.01.T01:intron 20.0%
!!! AAAAATTTTGGTAGAAGTTT+TGG - Chr1:85230251-85230270 None:intergenic 20.0%
!!! AAATTAGTTGACTTAATCTA+GGG + Chr1:85237047-85237066 MsG0180004985.01.T01:intron 20.0%
!!! ACAATCAAAATTTTGATGAT+TGG + Chr1:85236587-85236606 MsG0180004985.01.T01:intron 20.0%
!!! ACTCAAAAGAGTTATATTTT+CGG + Chr1:85233095-85233114 MsG0180004985.01.T01:intron 20.0%
!!! AGTTGTGTGTTTTTTTTATT+AGG - Chr1:85231800-85231819 None:intergenic 20.0%
!!! ATTTATATCCGAGTTTATTT+TGG + Chr1:85238567-85238586 MsG0180004985.01.T01:intron 20.0%
!!! ATTTTTGTTTTGAGAAAGAA+AGG - Chr1:85236484-85236503 None:intergenic 20.0%
!!! CAAAATTACACATTTTCAAA+TGG + Chr1:85231663-85231682 MsG0180004985.01.T01:intron 20.0%
!!! CAATCAAAATTTTGATGATT+GGG + Chr1:85236588-85236607 MsG0180004985.01.T01:intron 20.0%
!!! CTATCAATTCTTTTTCATAA+AGG + Chr1:85232464-85232483 MsG0180004985.01.T01:intron 20.0%
!!! CTATTTCTTTTTCAGTTAAA+TGG - Chr1:85237344-85237363 None:intergenic 20.0%
!!! CTCATTATTTTTTCTGAAAA+AGG - Chr1:85230687-85230706 None:intergenic 20.0%
!!! GCTGATTTTAAAATTAATTC+AGG + Chr1:85231362-85231381 MsG0180004985.01.T01:intron 20.0%
!!! GTTACATTTTTTTTGTTCTT+GGG + Chr1:85238078-85238097 MsG0180004985.01.T01:intron 20.0%
!!! GTTATGTTTACAGTTAATTT+TGG + Chr1:85240090-85240109 MsG0180004985.01.T01:three_prime_UTR 20.0%
!!! GTTGTGTGTTTTTTTTATTA+GGG - Chr1:85231799-85231818 None:intergenic 20.0%
!!! TAGAGAAAAAAATTCACTTT+TGG + Chr1:85233398-85233417 MsG0180004985.01.T01:intron 20.0%
!!! TATTGACTAATTAGTTGTTT+AGG + Chr1:85238365-85238384 MsG0180004985.01.T01:intron 20.0%
!!! TATTTTTCATTTTTGAGTGA+GGG + Chr1:85231991-85232010 MsG0180004985.01.T01:intron 20.0%
!!! TCTCAATTTTTGTTTGATAA+AGG + Chr1:85234900-85234919 MsG0180004985.01.T01:intron 20.0%
!!! TGTAATATTGTTTGAAATTG+TGG + Chr1:85229926-85229945 MsG0180004985.01.T01:intron 20.0%
!!! TTACCAAATTTTTAAACAAG+TGG - Chr1:85231301-85231320 None:intergenic 20.0%
!!! TTAGAAATTAAAAGAGGTTT+TGG - Chr1:85233911-85233930 None:intergenic 20.0%
!!! TTATTTTTCATTTTTGAGTG+AGG + Chr1:85231990-85232009 MsG0180004985.01.T01:intron 20.0%
!!! TTGGCGTAATATAAAAATTT+TGG - Chr1:85230263-85230282 None:intergenic 20.0%
!!! TTGTGTGTTTTTTTTATTAG+GGG - Chr1:85231798-85231817 None:intergenic 20.0%
!!! TTTAATTTAGGTTAACGTTA+GGG + Chr1:85234958-85234977 MsG0180004985.01.T01:intron 20.0%
!!! TTTTAATAAATAAACGAGGA+GGG + Chr1:85232602-85232621 MsG0180004985.01.T01:intron 20.0%
!!! TTTTATTTTATGCAACATGA+AGG + Chr1:85232700-85232719 MsG0180004985.01.T01:intron 20.0%
!!! TTTTTAATAAATAAACGAGG+AGG + Chr1:85232601-85232620 MsG0180004985.01.T01:intron 20.0%
! AAATCATACTAAATACCTAG+GGG - Chr1:85238269-85238288 None:intergenic 25.0%
! AAATCGATAGATACAAATCA+TGG + Chr1:85237412-85237431 MsG0180004985.01.T01:intron 25.0%
! AACACAAAATCATACAGTTT+AGG - Chr1:85235477-85235496 None:intergenic 25.0%
! AAGAAAAGGATAACAACAAT+GGG + Chr1:85234042-85234061 MsG0180004985.01.T01:intron 25.0%
! ACAAAAGAACATGAACATAT+CGG - Chr1:85239177-85239196 None:intergenic 25.0%
! ACAAATAACAATGAATGGAT+TGG + Chr1:85232261-85232280 MsG0180004985.01.T01:intron 25.0%
! ACATAATGTCAACATACAAA+AGG - Chr1:85239226-85239245 None:intergenic 25.0%
! ACCATGTAATATATATCCAA+TGG + Chr1:85233961-85233980 MsG0180004985.01.T01:intron 25.0%
! ACTCATCTTTGCTTATAAAT+AGG - Chr1:85233711-85233730 None:intergenic 25.0%
! ATATAATTATTGGCATGACT+AGG + Chr1:85233999-85234018 MsG0180004985.01.T01:intron 25.0%
! ATGCATAAAATAAGAGAAGT+TGG - Chr1:85239346-85239365 None:intergenic 25.0%
! ATGTATTTGGAAATTATGGA+CGG + Chr1:85237259-85237278 MsG0180004985.01.T01:intron 25.0%
! ATTCTGTTTACAAGTAAACA+CGG - Chr1:85233793-85233812 None:intergenic 25.0%
! CAAATCATACTAAATACCTA+GGG - Chr1:85238270-85238289 None:intergenic 25.0%
! CAATACCTCAAATTTACAAA+AGG + Chr1:85239577-85239596 MsG0180004985.01.T01:three_prime_UTR 25.0%
! CATAATGTCAACATACAAAA+GGG - Chr1:85239225-85239244 None:intergenic 25.0%
! CCAATTATGATTGACATAAA+TGG - Chr1:85233866-85233885 None:intergenic 25.0%
! CCATTTATGTCAATCATAAT+TGG + Chr1:85233863-85233882 MsG0180004985.01.T01:intron 25.0%
! GATATATATTACATGGTTGA+TGG - Chr1:85233958-85233977 None:intergenic 25.0%
! GTGAAAAAGTAGTTGAAATA+TGG + Chr1:85236110-85236129 MsG0180004985.01.T01:intron 25.0%
! TAAGAATTTCTTGTCATTGA+AGG + Chr1:85234457-85234476 MsG0180004985.01.T01:intron 25.0%
! TAATCAAACCATTAACTACT+TGG + Chr1:85230198-85230217 MsG0180004985.01.T01:intron 25.0%
! TAGATATACAACAAGTTAGA+AGG - Chr1:85239319-85239338 None:intergenic 25.0%
! TATATGGTATACTTGCAATA+TGG + Chr1:85236937-85236956 MsG0180004985.01.T01:intron 25.0%
! TATGTTGACATTATGTATGT+TGG + Chr1:85239230-85239249 MsG0180004985.01.T01:intron 25.0%
! TCAAATCATACTAAATACCT+AGG - Chr1:85238271-85238290 None:intergenic 25.0%
! TCAAATCATCAATTACTGAA+CGG + Chr1:85232303-85232322 MsG0180004985.01.T01:intron 25.0%
! TCCATTGGATATATATTACA+TGG - Chr1:85233965-85233984 None:intergenic 25.0%
! TCTAGATACCAAGAAAAATA+CGG - Chr1:85239117-85239136 None:intergenic 25.0%
! TCTCTCAAAATATTAAGAAG+AGG + Chr1:85233319-85233338 MsG0180004985.01.T01:intron 25.0%
! TGTGTAAAGTTTAACAATGT+CGG - Chr1:85234216-85234235 None:intergenic 25.0%
! TGTTTATGTGTTAATGTGAA+TGG + Chr1:85235104-85235123 MsG0180004985.01.T01:intron 25.0%
! TGTTTCACAAGAATAACATT+GGG + Chr1:85235740-85235759 MsG0180004985.01.T01:CDS 25.0%
! TTGACTAATTAGTTGTTTAG+GGG + Chr1:85238367-85238386 MsG0180004985.01.T01:intron 25.0%
! TTGATATACGTTTGTTTGTT+TGG + Chr1:85236639-85236658 MsG0180004985.01.T01:intron 25.0%
! TTGGATGTATTTGGAAATTA+TGG + Chr1:85237255-85237274 MsG0180004985.01.T01:intron 25.0%
! TTGTTTGATCTACACATATT+AGG + Chr1:85230103-85230122 MsG0180004985.01.T01:intron 25.0%
! TTTACTTGTAAACAGAATTG+AGG + Chr1:85233795-85233814 MsG0180004985.01.T01:intron 25.0%
!! ATGTTTCTGTCAATAATTCA+GGG - Chr1:85237491-85237510 None:intergenic 25.0%
!! CAAATTAGTTGACTTAATCT+AGG + Chr1:85237046-85237065 MsG0180004985.01.T01:intron 25.0%
!! GTTTAATTTAGGTTAACGTT+AGG + Chr1:85234957-85234976 MsG0180004985.01.T01:intron 25.0%
!! TAAACTGTATGATTTTGTGT+TGG + Chr1:85235476-85235495 MsG0180004985.01.T01:intron 25.0%
!! TAGTAATTTTGGACCATTTT+GGG - Chr1:85234086-85234105 None:intergenic 25.0%
!! TATGTTTCTGTCAATAATTC+AGG - Chr1:85237492-85237511 None:intergenic 25.0%
!! TATTTAAAATTTCAGATGCG+AGG + Chr1:85233583-85233602 MsG0180004985.01.T01:intron 25.0%
!! TGAAAAGATATTCTTTTAGG+TGG - Chr1:85234378-85234397 None:intergenic 25.0%
!! TGAATGATTGAAGTTTGTTT+GGG - Chr1:85232940-85232959 None:intergenic 25.0%
!! TTTTGCTTATTGAAATCCAT+TGG - Chr1:85233980-85233999 None:intergenic 25.0%
!!! AAGAATTTTTGAGTTTCGAT+CGG - Chr1:85239448-85239467 None:intergenic 25.0%
!!! ATTACTAATTTTGATTTCGG+TGG - Chr1:85231883-85231902 None:intergenic 25.0%
!!! CAAACTCATAAATTTGCTAA+GGG + Chr1:85236165-85236184 MsG0180004985.01.T01:intron 25.0%
!!! CTTTTGTAAATTTGAGGTAT+TGG - Chr1:85239579-85239598 None:intergenic 25.0%
!!! GAAAAGATATTCTTTTAGGT+GGG - Chr1:85234377-85234396 None:intergenic 25.0%
!!! GGTTACATTTTTTTTGTTCT+TGG + Chr1:85238077-85238096 MsG0180004985.01.T01:intron 25.0%
!!! GTTTTGACATCATTCATAAT+AGG + Chr1:85237149-85237168 MsG0180004985.01.T01:intron 25.0%
!!! TCAAACTCATAAATTTGCTA+AGG + Chr1:85236164-85236183 MsG0180004985.01.T01:intron 25.0%
!!! TCAATTCTTTTTCATAAAGG+AGG + Chr1:85232467-85232486 MsG0180004985.01.T01:intron 25.0%
!!! TCATCAAAATTTTGATTGTG+TGG - Chr1:85236586-85236605 None:intergenic 25.0%
!!! TTATTTTATGCATCATTTGC+TGG + Chr1:85239353-85239372 MsG0180004985.01.T01:intron 25.0%
!!! TTTTTCTTTAGAGAAGTCAA+GGG + Chr1:85238816-85238835 MsG0180004985.01.T01:intron 25.0%
AAACTAAATGTCGTGAATCA+TGG - Chr1:85230936-85230955 None:intergenic 30.0%
AAATACGGTCAAAGTAAGTT+AGG + Chr1:85231639-85231658 MsG0180004985.01.T01:intron 30.0%
AAATATCAGCACCATTTGAT+TGG + Chr1:85237621-85237640 MsG0180004985.01.T01:intron 30.0%
AACTAAATGTCGTGAATCAT+GGG - Chr1:85230935-85230954 None:intergenic 30.0%
AAGATATGTCTCCTTCAATA+GGG - Chr1:85236672-85236691 None:intergenic 30.0%
AATAATAGAAGGTTTGACGT+CGG + Chr1:85230453-85230472 MsG0180004985.01.T01:intron 30.0%
AATGACAATTCTTCATCAGT+AGG - Chr1:85234750-85234769 None:intergenic 30.0%
AATTTGTAAAATCTCACCTG+TGG - Chr1:85235438-85235457 None:intergenic 30.0%
ACAAACTTCAATCATTCACT+AGG + Chr1:85232942-85232961 MsG0180004985.01.T01:intron 30.0%
ACAGTAACAATTTAAGCCTT+TGG + Chr1:85237729-85237748 MsG0180004985.01.T01:intron 30.0%
ACCGTTATCCAAAATAAACT+CGG - Chr1:85238578-85238597 None:intergenic 30.0%
AGAATTTATCCTTGTTAGGA+AGG + Chr1:85238743-85238762 MsG0180004985.01.T01:intron 30.0%
AGGACATCAAATTTGAACAT+AGG + Chr1:85238176-85238195 MsG0180004985.01.T01:intron 30.0%
AGTATTCACTATGAGAGAAA+TGG + Chr1:85232825-85232844 MsG0180004985.01.T01:intron 30.0%
AGTCAATGTAATATGACCAA+CGG + Chr1:85237022-85237041 MsG0180004985.01.T01:intron 30.0%
ATACCATATAACCTGTGAAA+CGG - Chr1:85236927-85236946 None:intergenic 30.0%
ATCAAATTTGAACATAGGTG+AGG + Chr1:85238181-85238200 MsG0180004985.01.T01:intron 30.0%
ATCCAATTTGAAGAATCCAA+AGG - Chr1:85237748-85237767 None:intergenic 30.0%
ATGACAATTCTTCATCAGTA+GGG - Chr1:85234749-85234768 None:intergenic 30.0%
ATGAGAAATCCTTAGGAATT+GGG + Chr1:85240036-85240055 MsG0180004985.01.T01:three_prime_UTR 30.0%
ATGGTAAACTTGAAGACAAA+GGG - Chr1:85238043-85238062 None:intergenic 30.0%
ATTAAAGGAAGGAAACAACT+TGG + Chr1:85238145-85238164 MsG0180004985.01.T01:intron 30.0%
ATTGACAGAAACATAAGTGA+GGG + Chr1:85237497-85237516 MsG0180004985.01.T01:intron 30.0%
CAAATTGCTAAATTAGTGGT+TGG - Chr1:85232424-85232443 None:intergenic 30.0%
CACAACACAACAGTATAATT+TGG - Chr1:85232628-85232647 None:intergenic 30.0%
CACTCATTTAAGAAAGCTAA+AGG - Chr1:85236707-85236726 None:intergenic 30.0%
GAACAATCTTTCTGTTATAG+CGG + Chr1:85229887-85229906 MsG0180004985.01.T01:intron 30.0%
GAAGAAAAGGATAACAACAA+TGG + Chr1:85234041-85234060 MsG0180004985.01.T01:intron 30.0%
GAATTTATCCTTGTTAGGAA+GGG + Chr1:85238744-85238763 MsG0180004985.01.T01:intron 30.0%
GTGTTTCACAAGAATAACAT+TGG + Chr1:85235739-85235758 MsG0180004985.01.T01:CDS 30.0%
GTTGGATAATTCAGAATTGA+TGG + Chr1:85239248-85239267 MsG0180004985.01.T01:intron 30.0%
TAAAATGTCAACAGGAAAGT+CGG - Chr1:85238428-85238447 None:intergenic 30.0%
TAACATTTCGTCATGTTTAC+AGG + Chr1:85239378-85239397 MsG0180004985.01.T01:intron 30.0%
TAAGATATGTCTCCTTCAAT+AGG - Chr1:85236673-85236692 None:intergenic 30.0%
TACCTCAAATTTACAAAAGG+CGG + Chr1:85239580-85239599 MsG0180004985.01.T01:three_prime_UTR 30.0%
TACTTCACGAAACAAAGTTA+AGG - Chr1:85238680-85238699 None:intergenic 30.0%
TAGAAAGTAGACGAATATGA+AGG - Chr1:85236445-85236464 None:intergenic 30.0%
TAGTATGATTTGATGAAGAC+TGG + Chr1:85238278-85238297 MsG0180004985.01.T01:intron 30.0%
TATGTTCAAATTTGATGTCC+TGG - Chr1:85238177-85238196 None:intergenic 30.0%
TATTGACAGAAACATAAGTG+AGG + Chr1:85237496-85237515 MsG0180004985.01.T01:intron 30.0%
TCAACTGTGTCAAGTATTAT+GGG - Chr1:85231467-85231486 None:intergenic 30.0%
TCCAATCATTCTAATGTTTC+TGG + Chr1:85239618-85239637 MsG0180004985.01.T01:three_prime_UTR 30.0%
TCCAGAAACATTAGAATGAT+TGG - Chr1:85239622-85239641 None:intergenic 30.0%
TGAAATATGGAAGTTGTTGT+CGG + Chr1:85236123-85236142 MsG0180004985.01.T01:intron 30.0%
TGACATCATTCATAATAGGT+AGG + Chr1:85237153-85237172 MsG0180004985.01.T01:intron 30.0%
TGATGGTAAGAGAACAAATT+GGG + Chr1:85235344-85235363 MsG0180004985.01.T01:CDS 30.0%
TGGCCACTTGTTTAAAAATT+TGG + Chr1:85231295-85231314 MsG0180004985.01.T01:intron 30.0%
TGTAAAAAACTCAATCGAAC+TGG - Chr1:85232067-85232086 None:intergenic 30.0%
TTATGTGTTAATGTGAATGG+TGG + Chr1:85235107-85235126 MsG0180004985.01.T01:intron 30.0%
TTATTATCTAACCTTACACG+TGG - Chr1:85232239-85232258 None:intergenic 30.0%
TTCTGATTGCCAATAATAGA+AGG + Chr1:85230442-85230461 MsG0180004985.01.T01:intron 30.0%
TTCTGTTTACAAGTAAACAC+GGG - Chr1:85233792-85233811 None:intergenic 30.0%
TTGATGTTCCCTAAGTTATA+CGG + Chr1:85236503-85236522 MsG0180004985.01.T01:intron 30.0%
TTTGTTGCATGAATAACACT+TGG + Chr1:85231059-85231078 MsG0180004985.01.T01:intron 30.0%
! AACAATAGACAATTTGGGTT+TGG - Chr1:85235583-85235602 None:intergenic 30.0%
! AAGTAACTTGTAGAGGAATT+GGG + Chr1:85238538-85238557 MsG0180004985.01.T01:intron 30.0%
! ACAATAGACAATTTGGGTTT+GGG - Chr1:85235582-85235601 None:intergenic 30.0%
! AGTTATGAAGTAACTTGTAG+AGG + Chr1:85238531-85238550 MsG0180004985.01.T01:intron 30.0%
! ATACATTCTTGGTGACATTT+GGG + Chr1:85230842-85230861 MsG0180004985.01.T01:intron 30.0%
! GCTTGAATAATGCTTTATTG+TGG + Chr1:85237673-85237692 MsG0180004985.01.T01:intron 30.0%
! GTAGTAATTTTGGACCATTT+TGG - Chr1:85234087-85234106 None:intergenic 30.0%
! GTGAATGATTGAAGTTTGTT+TGG - Chr1:85232941-85232960 None:intergenic 30.0%
! TACCTTTTCTCATTGCTTAT+TGG - Chr1:85237596-85237615 None:intergenic 30.0%
! TGAATAATGCTTTATTGTGG+TGG + Chr1:85237676-85237695 MsG0180004985.01.T01:intron 30.0%
! TGTTGTTATCCTTTTCTTCA+TGG - Chr1:85234040-85234059 None:intergenic 30.0%
! TTTGTCTTCAAGTTTACCAT+GGG + Chr1:85238043-85238062 MsG0180004985.01.T01:intron 30.0%
! TTTTCTGAACAAGAATAGTG+TGG - Chr1:85237129-85237148 None:intergenic 30.0%
!! AAACAAAGTTAAGGTACTGT+TGG - Chr1:85238671-85238690 None:intergenic 30.0%
!! AAATTTGAGGTATTGGCTTT+GGG - Chr1:85239572-85239591 None:intergenic 30.0%
!! AGTATAATCCACTGATTTCT+AGG + Chr1:85239091-85239110 MsG0180004985.01.T01:intron 30.0%
!! CATAAATTTGCTAAGGGATT+GGG + Chr1:85236171-85236190 MsG0180004985.01.T01:intron 30.0%
!! GTTTTTCTTTAGAGAAGTCA+AGG + Chr1:85238815-85238834 MsG0180004985.01.T01:intron 30.0%
!! TAAATTTGAGGTATTGGCTT+TGG - Chr1:85239573-85239592 None:intergenic 30.0%
!! TCATAAATTTGCTAAGGGAT+TGG + Chr1:85236170-85236189 MsG0180004985.01.T01:intron 30.0%
!! TCCAACTTTAAAATGTCAAC+AGG - Chr1:85238436-85238455 None:intergenic 30.0%
!! TTACTTTTGTCGATATGCAA+TGG + Chr1:85236005-85236024 MsG0180004985.01.T01:intron 30.0%
!! TTTACATGCCTTGTTTGTTA+GGG - Chr1:85233187-85233206 None:intergenic 30.0%
!! TTTTTGGTAGATAGACGAAA+TGG - Chr1:85229785-85229804 None:intergenic 30.0%
!!! AAAATTTTGATTGTGTGGAC+AGG - Chr1:85236581-85236600 None:intergenic 30.0%
!!! AAGGGCTTTTTAGAGTATTT+AGG + Chr1:85236975-85236994 MsG0180004985.01.T01:intron 30.0%
!!! ACTTTTTCACAAACACGTAA+TGG - Chr1:85236100-85236119 None:intergenic 30.0%
!!! CACTTGCATAATTTTTTCCA+TGG + Chr1:85233062-85233081 MsG0180004985.01.T01:intron 30.0%
!!! CTATTTTTGTAGGGTAGATA+AGG + Chr1:85237523-85237542 MsG0180004985.01.T01:intron 30.0%
!!! GAAATGGGTTTTGTTTATCT+TGG + Chr1:85235008-85235027 MsG0180004985.01.T01:intron 30.0%
!!! GCTTTTTAGAGTATTTAGGT+TGG + Chr1:85236979-85236998 MsG0180004985.01.T01:intron 30.0%
!!! TCCGAGTTTATTTTGGATAA+CGG + Chr1:85238574-85238593 MsG0180004985.01.T01:intron 30.0%
!!! TCCTGTTGACATTTTAAAGT+TGG + Chr1:85238432-85238451 MsG0180004985.01.T01:intron 30.0%
!!! TTTTTTGTTCTTGGGTTGTT+TGG + Chr1:85238086-85238105 MsG0180004985.01.T01:intron 30.0%
AAATTTGAACATAGGTGAGG+AGG + Chr1:85238184-85238203 MsG0180004985.01.T01:intron 35.0%
AACATGAATGACCTCTAATG+AGG - Chr1:85238798-85238817 None:intergenic 35.0%
AACCTATGACAAACGCTATA+TGG - Chr1:85232502-85232521 None:intergenic 35.0%
AACTGGTACATCATCATACA+AGG - Chr1:85240073-85240092 None:intergenic 35.0%
AAGGGACTTCAAATAGATTG+AGG - Chr1:85239207-85239226 None:intergenic 35.0%
AAGTCAACTAATTTGACCGT+TGG - Chr1:85237041-85237060 None:intergenic 35.0%
AAGTTGAAACCTAGATACGA+TGG + Chr1:85232161-85232180 MsG0180004985.01.T01:intron 35.0%
AATTAAAACTCCGGACATTC+CGG - Chr1:85236311-85236330 None:intergenic 35.0%
ACAAGTCACGAAGTGAAAAT+AGG - Chr1:85239031-85239050 None:intergenic 35.0%
ACATGAATGACCTCTAATGA+GGG - Chr1:85238797-85238816 None:intergenic 35.0%
ACTGCACTATTCATATGAGT+TGG + Chr1:85232885-85232904 MsG0180004985.01.T01:intron 35.0%
ACTTCAATCATTCACTAGGT+AGG + Chr1:85232946-85232965 MsG0180004985.01.T01:intron 35.0%
AGAAGCTGTTTGGATGTATT+TGG + Chr1:85237246-85237265 MsG0180004985.01.T01:intron 35.0%
AGAATCACTTGAATCGAAGA+AGG + Chr1:85239789-85239808 MsG0180004985.01.T01:three_prime_UTR 35.0%
AGAATTGCTAGCAAACTTTC+AGG - Chr1:85238405-85238424 None:intergenic 35.0%
AGCAATAGCATCAAATCTGA+AGG - Chr1:85234804-85234823 None:intergenic 35.0%
AGCCTTTGGATTCTTCAAAT+TGG + Chr1:85237743-85237762 MsG0180004985.01.T01:intron 35.0%
AGTAGATGTGGATACAATAC+AGG - Chr1:85231408-85231427 None:intergenic 35.0%
AGTGACATTCCAAAGAGATA+TGG - Chr1:85233046-85233065 None:intergenic 35.0%
AGTTCACAAATCTACGAACA+GGG + Chr1:85231727-85231746 MsG0180004985.01.T01:intron 35.0%
ATACTAAATACCTAGGGGTT+GGG - Chr1:85238264-85238283 None:intergenic 35.0%
ATATAGCTAGCAAACTTCGA+CGG + Chr1:85229863-85229882 MsG0180004985.01.T01:intron 35.0%
ATATCTACAAGAGTGAACCA+TGG + Chr1:85234831-85234850 MsG0180004985.01.T01:intron 35.0%
ATGACTAGGAATTCAACACT+TGG + Chr1:85234013-85234032 MsG0180004985.01.T01:intron 35.0%
ATGCATGTCATTCACATGTT+CGG - Chr1:85240164-85240183 None:intergenic 35.0%
ATGGGATATTAGCATATGTG+AGG + Chr1:85237550-85237569 MsG0180004985.01.T01:intron 35.0%
ATTCGTCTACTTTCTATCCT+CGG + Chr1:85236449-85236468 MsG0180004985.01.T01:intron 35.0%
ATTCTAGATTGTCTATCCCT+GGG - Chr1:85236790-85236809 None:intergenic 35.0%
CACCAATAAGCAATGAGAAA+AGG + Chr1:85237591-85237610 MsG0180004985.01.T01:intron 35.0%
CATGGTAAACTTGAAGACAA+AGG - Chr1:85238044-85238063 None:intergenic 35.0%
CATTTATTACCTGAAACGCA+AGG + Chr1:85234766-85234785 MsG0180004985.01.T01:intron 35.0%
CCAAAAAGCCGTATAACTTA+GGG - Chr1:85236514-85236533 None:intergenic 35.0%
CGAGCTCTCATAGTAAAAAT+AGG + Chr1:85231772-85231791 MsG0180004985.01.T01:intron 35.0%
CTAAGAGAAACGGAAAAGAT+GGG - Chr1:85234517-85234536 None:intergenic 35.0%
CTACGTCATATCGATAGAAT+GGG - Chr1:85237449-85237468 None:intergenic 35.0%
CTAGTCTACACAAATCATCT+TGG - Chr1:85232779-85232798 None:intergenic 35.0%
CTGATGGTAAGAGAACAAAT+TGG + Chr1:85235343-85235362 MsG0180004985.01.T01:CDS 35.0%
GAATTGCTAGCAAACTTTCA+GGG - Chr1:85238404-85238423 None:intergenic 35.0%
GACGTCAAACCTTCTATTAT+TGG - Chr1:85230454-85230473 None:intergenic 35.0%
GATCCAGAAGAAAGAGTAAA+GGG + Chr1:85230633-85230652 MsG0180004985.01.T01:intron 35.0%
GATGAGAAATCCTTAGGAAT+TGG + Chr1:85240035-85240054 MsG0180004985.01.T01:three_prime_UTR 35.0%
GATGTAAGGTAAATAACACG+TGG - Chr1:85230419-85230438 None:intergenic 35.0%
GCAATAGCATCAAATCTGAA+GGG - Chr1:85234803-85234822 None:intergenic 35.0%
GCAGACAGAAAATGTTTCTT+CGG - Chr1:85239748-85239767 None:intergenic 35.0%
GGGAAGAATTTATCCTTGTT+AGG + Chr1:85238739-85238758 MsG0180004985.01.T01:intron 35.0%
GGTGATTGATAGAAATTCAG+TGG + Chr1:85238865-85238884 MsG0180004985.01.T01:intron 35.0%
GTCAACTGTGTCAAGTATTA+TGG - Chr1:85231468-85231487 None:intergenic 35.0%
GTCTGGGAAAATTGTACTTT+GGG + Chr1:85238718-85238737 MsG0180004985.01.T01:intron 35.0%
GTGACATTCCAAAGAGATAT+GGG - Chr1:85233045-85233064 None:intergenic 35.0%
GTGCACTTCTTATCTTTGTA+TGG + Chr1:85236739-85236758 MsG0180004985.01.T01:intron 35.0%
GTGGTAAAGATGGTGAATTA+GGG - Chr1:85234552-85234571 None:intergenic 35.0%
GTTGGAATCATCAACAATGA+GGG - Chr1:85232980-85232999 None:intergenic 35.0%
TAGACGAATATGAAGGACAA+GGG - Chr1:85236438-85236457 None:intergenic 35.0%
TAGGGTAGATAAGGAAGAAT+GGG + Chr1:85237532-85237551 MsG0180004985.01.T01:intron 35.0%
TATAAACTCACACACACAAG+TGG - Chr1:85229753-85229772 None:intergenic 35.0%
TATCCACATCTACTCTTTAG+TGG + Chr1:85231414-85231433 MsG0180004985.01.T01:intron 35.0%
TATCTACAAGAGTGAACCAT+GGG + Chr1:85234832-85234851 MsG0180004985.01.T01:intron 35.0%
TCAAATACGTTGTTGATCGA+AGG - Chr1:85230063-85230082 None:intergenic 35.0%
TCTACGTCATATCGATAGAA+TGG - Chr1:85237450-85237469 None:intergenic 35.0%
TCTGGGAAAATTGTACTTTG+GGG + Chr1:85238719-85238738 MsG0180004985.01.T01:intron 35.0%
TCTTACCATGTCCAATCAAA+TGG - Chr1:85237635-85237654 None:intergenic 35.0%
TGACAAACGCTATATGGAAT+TGG - Chr1:85232496-85232515 None:intergenic 35.0%
TGACATTCCAAAGAGATATG+GGG - Chr1:85233044-85233063 None:intergenic 35.0%
TGACGTAGATGATGAAAAGA+AGG + Chr1:85237461-85237480 MsG0180004985.01.T01:intron 35.0%
TGATGATTCCAACATTGTTG+TGG + Chr1:85232987-85233006 MsG0180004985.01.T01:intron 35.0%
TGCTTCTTCCAAGTAGTTAA+TGG - Chr1:85230209-85230228 None:intergenic 35.0%
TGGTCACACAAAAGAAAAAG+TGG - Chr1:85233138-85233157 None:intergenic 35.0%
TGTCTGGGAAAATTGTACTT+TGG + Chr1:85238717-85238736 MsG0180004985.01.T01:intron 35.0%
TGTTGGAATCATCAACAATG+AGG - Chr1:85232981-85233000 None:intergenic 35.0%
TTACCACTAAAGAGTAGATG+TGG - Chr1:85231420-85231439 None:intergenic 35.0%
TTAGGTTAACGTTAGGGTTT+GGG + Chr1:85234964-85234983 MsG0180004985.01.T01:intron 35.0%
TTCCATATAGCGTTTGTCAT+AGG + Chr1:85232497-85232516 MsG0180004985.01.T01:intron 35.0%
TTCTAACCAAAAAGATCCCA+TGG - Chr1:85234851-85234870 None:intergenic 35.0%
TTGGAATCATCAACAATGAG+GGG - Chr1:85232979-85232998 None:intergenic 35.0%
TTTCTCCTTTCCATTTATGC+CGG + Chr1:85236402-85236421 MsG0180004985.01.T01:intron 35.0%
TTTGAGTATGTTCAACACCA+TGG - Chr1:85233082-85233101 None:intergenic 35.0%
! ACAAAGATAAGAAGTGCACA+AGG - Chr1:85236738-85236757 None:intergenic 35.0%
! ACCTTTTGTTGAAGAAGAGT+GGG + Chr1:85235786-85235805 MsG0180004985.01.T01:CDS 35.0%
! AGACAATCTAGAATCACTGA+TGG + Chr1:85236796-85236815 MsG0180004985.01.T01:intron 35.0%
! AGTTGACTTAATCTAGGGAT+TGG + Chr1:85237052-85237071 MsG0180004985.01.T01:intron 35.0%
! ATAATGCTTTATTGTGGTGG+TGG + Chr1:85237679-85237698 MsG0180004985.01.T01:intron 35.0%
! ATGCATTGACATGCGTAATA+AGG - Chr1:85231490-85231509 None:intergenic 35.0%
! CAATTTGTTCTCTTACCATC+AGG - Chr1:85235345-85235364 None:intergenic 35.0%
! CATACATTCTTGGTGACATT+TGG + Chr1:85230841-85230860 MsG0180004985.01.T01:intron 35.0%
! CCTAAGTTATACGGCTTTTT+GGG + Chr1:85236512-85236531 MsG0180004985.01.T01:intron 35.0%
! CTAAGTTATACGGCTTTTTG+GGG + Chr1:85236513-85236532 MsG0180004985.01.T01:intron 35.0%
! CTGGGCTGTTTGTTTAATTT+AGG + Chr1:85234946-85234965 MsG0180004985.01.T01:intron 35.0%
! CTTTGCTGAGATTTTCAACA+CGG - Chr1:85239993-85240012 None:intergenic 35.0%
! CTTTGTCTTCAAGTTTACCA+TGG + Chr1:85238042-85238061 MsG0180004985.01.T01:intron 35.0%
! GAAGTAACTTGTAGAGGAAT+TGG + Chr1:85238537-85238556 MsG0180004985.01.T01:intron 35.0%
! GAAGTTTGTTTGGGTGAATT+TGG - Chr1:85232931-85232950 None:intergenic 35.0%
! GATGATGATGAGAAATCCTT+AGG + Chr1:85240029-85240048 MsG0180004985.01.T01:three_prime_UTR 35.0%
! GTGGCATTGAGTTGTTTAAT+CGG - Chr1:85237836-85237855 None:intergenic 35.0%
! TCGGTTTACATTTTCGAAAG+AGG - Chr1:85237817-85237836 None:intergenic 35.0%
! TGCTTAGATTCATCCTTTTC+AGG - Chr1:85239507-85239526 None:intergenic 35.0%
! TGGACAAGAAGTATGGAAAT+GGG + Chr1:85235197-85235216 MsG0180004985.01.T01:CDS 35.0%
! TTACAAGTAAACACGGGTTA+TGG - Chr1:85233786-85233805 None:intergenic 35.0%
! TTCAAGTTTACCATGGGAAT+TGG + Chr1:85238049-85238068 MsG0180004985.01.T01:intron 35.0%
! TTGGACAAGAAGTATGGAAA+TGG + Chr1:85235196-85235215 MsG0180004985.01.T01:CDS 35.0%
! TTTAAGATGCTGCTAGATTC+AGG - Chr1:85237395-85237414 None:intergenic 35.0%
! TTTAGGTTAACGTTAGGGTT+TGG + Chr1:85234963-85234982 MsG0180004985.01.T01:intron 35.0%
! TTTAGTTGGTGTGATTCGAT+TGG + Chr1:85234281-85234300 MsG0180004985.01.T01:intron 35.0%
! TTTCTAGGCCGTATTTTTCT+TGG + Chr1:85239106-85239125 MsG0180004985.01.T01:intron 35.0%
! TTTGCTGAGATTTTCAACAC+GGG - Chr1:85239992-85240011 None:intergenic 35.0%
!! AGATATTCTTTTAGGTGGGT+TGG - Chr1:85234373-85234392 None:intergenic 35.0%
!! AGTGGTATTTTTCAGTGCAT+TGG + Chr1:85235177-85235196 MsG0180004985.01.T01:CDS 35.0%
!! ATAGCTACCTACTTGTTGTA+TGG + Chr1:85237360-85237379 MsG0180004985.01.T01:intron 35.0%
!! CTTTACATGCCTTGTTTGTT+AGG - Chr1:85233188-85233207 None:intergenic 35.0%
!! GAAGCATTGTTGTTTATACG+TGG + Chr1:85235554-85235573 MsG0180004985.01.T01:intron 35.0%
!! GATATTCTTTTAGGTGGGTT+GGG - Chr1:85234372-85234391 None:intergenic 35.0%
!! TGTAAAGAAAGTGTTCGACT+TGG + Chr1:85233201-85233220 MsG0180004985.01.T01:intron 35.0%
!! TTGATGATTTGAGTTGTTCG+AGG - Chr1:85232295-85232314 None:intergenic 35.0%
!!! AATTGGTTTTCGACATGTTG+AGG + Chr1:85237219-85237238 MsG0180004985.01.T01:intron 35.0%
!!! ATCAAGTGGAGTTTTGTTGT+TGG - Chr1:85239413-85239432 None:intergenic 35.0%
!!! GATGACAGAGTGACATTTTT+TGG + Chr1:85230706-85230725 MsG0180004985.01.T01:intron 35.0%
!!! GATTGAGTTTTTTACACCCA+AGG + Chr1:85232071-85232090 MsG0180004985.01.T01:intron 35.0%
!!! TGAGGGATGCTATTTTTGTA+GGG + Chr1:85237514-85237533 MsG0180004985.01.T01:intron 35.0%
!!! TTTCATTTTTGAGTGAGGGT+GGG + Chr1:85231995-85232014 MsG0180004985.01.T01:intron 35.0%
!!! TTTTCATTTTTGAGTGAGGG+TGG + Chr1:85231994-85232013 MsG0180004985.01.T01:intron 35.0%
AAAAGATGGGTCCTTGATTG+AGG - Chr1:85234504-85234523 None:intergenic 40.0%
AAAAGCCCTTTCAAATAGCC+AGG - Chr1:85236965-85236984 None:intergenic 40.0%
AAAATTTCAGATGCGAGGAG+AGG + Chr1:85233588-85233607 MsG0180004985.01.T01:intron 40.0%
AAACAGGGTAGAAGGAGAAA+AGG - Chr1:85237984-85238003 None:intergenic 40.0%
AAAGATGGGTCCTTGATTGA+GGG - Chr1:85234503-85234522 None:intergenic 40.0%
AAATACGGCCTAGAAATCAG+TGG - Chr1:85239102-85239121 None:intergenic 40.0%
AAATCTCAGCAAAGAGAACG+AGG + Chr1:85239999-85240018 MsG0180004985.01.T01:three_prime_UTR 40.0%
AAATGCCGAAATTGTTAGGC+CGG + Chr1:85229695-85229714 MsG0180004985.01.T01:CDS 40.0%
AAATTCATGACCGGAATGTC+CGG + Chr1:85236298-85236317 MsG0180004985.01.T01:intron 40.0%
AACTTGAAGACAAAGGGAAG+AGG - Chr1:85238037-85238056 None:intergenic 40.0%
AATAACATTGGGCCTCCAAA+TGG + Chr1:85235751-85235770 MsG0180004985.01.T01:CDS 40.0%
ACACCCTTTACTCTTTCTTC+TGG - Chr1:85230639-85230658 None:intergenic 40.0%
ACACTTGGTCCATGAAGAAA+AGG + Chr1:85234028-85234047 MsG0180004985.01.T01:intron 40.0%
ACTTTCTATCCTCGGCTTAA+TGG + Chr1:85236457-85236476 MsG0180004985.01.T01:intron 40.0%
AGAAAATGTTTCTTCGGAGC+AGG - Chr1:85239742-85239761 None:intergenic 40.0%
AGAATGATGCACATTAGCAG+AGG + Chr1:85232120-85232139 MsG0180004985.01.T01:intron 40.0%
AGAGAGAGAGGAATATGGAT+GGG + Chr1:85230360-85230379 MsG0180004985.01.T01:intron 40.0%
AGCTGGGTATAATCCTCTTT+GGG + Chr1:85238949-85238968 MsG0180004985.01.T01:intron 40.0%
AGGAAGAAATCATGTTGTGC+AGG + Chr1:85235924-85235943 MsG0180004985.01.T01:CDS 40.0%
AGTAATGGTCCTGTGAGTAA+TGG + Chr1:85235847-85235866 MsG0180004985.01.T01:CDS 40.0%
AGTGCATTGGACAAGAAGTA+TGG + Chr1:85235190-85235209 MsG0180004985.01.T01:CDS 40.0%
AGTGTGGTATCTCCAACATA+AGG - Chr1:85237113-85237132 None:intergenic 40.0%
ATGACACGTGAGTAACTTCT+CGG - Chr1:85237197-85237216 None:intergenic 40.0%
ATTAGCAGAGGCAAAATTGG+CGG + Chr1:85232132-85232151 MsG0180004985.01.T01:intron 40.0%
ATTCTTGAGACCCATCACTT+TGG + Chr1:85232036-85232055 MsG0180004985.01.T01:intron 40.0%
CAAACCAAGTTCAATGTAGG+TGG + Chr1:85236835-85236854 MsG0180004985.01.T01:intron 40.0%
CAAATGTCACGAGAATTGTG+GGG + Chr1:85230582-85230601 MsG0180004985.01.T01:intron 40.0%
CAACCGTTTCACAGGTTATA+TGG + Chr1:85236921-85236940 MsG0180004985.01.T01:intron 40.0%
CACATTAGCAGAGGCAAAAT+TGG + Chr1:85232129-85232148 MsG0180004985.01.T01:intron 40.0%
CATACTAAATACCTAGGGGT+TGG - Chr1:85238265-85238284 None:intergenic 40.0%
CATATAACCTGTGAAACGGT+TGG - Chr1:85236923-85236942 None:intergenic 40.0%
CATGGTAAGAACCGTTAGAA+AGG + Chr1:85237645-85237664 MsG0180004985.01.T01:intron 40.0%
CCAAATGTCACGAGAATTGT+GGG + Chr1:85230581-85230600 MsG0180004985.01.T01:intron 40.0%
CCCAAAAAGCCGTATAACTT+AGG - Chr1:85236515-85236534 None:intergenic 40.0%
CCTAAGAGAAACGGAAAAGA+TGG - Chr1:85234518-85234537 None:intergenic 40.0%
CGATTCAAGTGATTCTAGCA+GGG - Chr1:85239785-85239804 None:intergenic 40.0%
CTGTGTCAAGTATTATGGGA+CGG - Chr1:85231463-85231482 None:intergenic 40.0%
GACATGAAACATAGGTGTGA+AGG + Chr1:85233223-85233242 MsG0180004985.01.T01:intron 40.0%
GAGAGTTTCATCACCTGAAA+AGG + Chr1:85239491-85239510 MsG0180004985.01.T01:exon 40.0%
GAGTTCACAAATCTACGAAC+AGG + Chr1:85231726-85231745 MsG0180004985.01.T01:intron 40.0%
GAGTTCATGAGAAAGAGAGA+GGG + Chr1:85230730-85230749 MsG0180004985.01.T01:intron 40.0%
GATTCTAGATTGTCTATCCC+TGG - Chr1:85236791-85236810 None:intergenic 40.0%
GCGACACAATAAAAGTAGAC+CGG - Chr1:85236382-85236401 None:intergenic 40.0%
GGACTGGAGAATGTTAATCA+TGG - Chr1:85239971-85239990 None:intergenic 40.0%
GGATCCAGAAGAAAGAGTAA+AGG + Chr1:85230632-85230651 MsG0180004985.01.T01:intron 40.0%
GGTCAACAACTTGTCCTTTA+TGG + Chr1:85233008-85233027 MsG0180004985.01.T01:intron 40.0%
GGTGGTAAAGATGGTGAATT+AGG - Chr1:85234553-85234572 None:intergenic 40.0%
GTAGACGAATATGAAGGACA+AGG - Chr1:85236439-85236458 None:intergenic 40.0%
GTAGGGTAGATAAGGAAGAA+TGG + Chr1:85237531-85237550 MsG0180004985.01.T01:intron 40.0%
GTATTTCTCCCTTCCTAACA+AGG - Chr1:85238755-85238774 None:intergenic 40.0%
GTGTGGTATCTCCAACATAA+GGG - Chr1:85237112-85237131 None:intergenic 40.0%
GTTCGATGGTACATCTAGAA+AGG - Chr1:85238618-85238637 None:intergenic 40.0%
GTTGTGAAAGTAAAGAGCCA+AGG + Chr1:85232642-85232661 MsG0180004985.01.T01:intron 40.0%
GTTGTTGACCACAACAATGT+TGG - Chr1:85232998-85233017 None:intergenic 40.0%
GTTTCCACCTACATTGAACT+TGG - Chr1:85236842-85236861 None:intergenic 40.0%
GTTTGTTCTCATACCCAAAG+AGG - Chr1:85238965-85238984 None:intergenic 40.0%
TAACCTTCATCCAATTCCCA+TGG - Chr1:85238062-85238081 None:intergenic 40.0%
TACTAAATACCTAGGGGTTG+GGG - Chr1:85238263-85238282 None:intergenic 40.0%
TATACTTGCAATATGGCTCC+TGG + Chr1:85236944-85236963 MsG0180004985.01.T01:intron 40.0%
TCAAGCTGACACCTTTCTAA+CGG - Chr1:85237659-85237678 None:intergenic 40.0%
TCCAAATGTCACGAGAATTG+TGG + Chr1:85230580-85230599 MsG0180004985.01.T01:intron 40.0%
TCCCACTCTTCTTCAACAAA+AGG - Chr1:85235790-85235809 None:intergenic 40.0%
TCGATTCAAGTGATTCTAGC+AGG - Chr1:85239786-85239805 None:intergenic 40.0%
TGAGTAACTTCTCGGAAAGA+AGG - Chr1:85237189-85237208 None:intergenic 40.0%
TGAGTTCATGAGAAAGAGAG+AGG + Chr1:85230729-85230748 MsG0180004985.01.T01:intron 40.0%
TGGAAATTATGGACGGTCAT+TGG + Chr1:85237266-85237285 MsG0180004985.01.T01:intron 40.0%
TGGATCATGCATCTCTATTG+TGG - Chr1:85230564-85230583 None:intergenic 40.0%
TGGATCCTGTCGTGTATTAA+GGG + Chr1:85237286-85237305 MsG0180004985.01.T01:intron 40.0%
TGGCAAACCAAGTTCAATGT+AGG + Chr1:85236832-85236851 MsG0180004985.01.T01:intron 40.0%
TGGCAAATGCCGAAATTGTT+AGG + Chr1:85229691-85229710 MsG0180004985.01.T01:CDS 40.0%
TGGGTTGTTGCATACATTCT+TGG + Chr1:85230831-85230850 MsG0180004985.01.T01:intron 40.0%
TGTGTTAATGTGAATGGTGG+TGG + Chr1:85235110-85235129 MsG0180004985.01.T01:intron 40.0%
TGTTGAGGAAGAATTGGAGA+GGG + Chr1:85235386-85235405 MsG0180004985.01.T01:CDS 40.0%
TGTTGTCGTTGCAGTTACTT+AGG + Chr1:85235501-85235520 MsG0180004985.01.T01:intron 40.0%
TTAACGCTTCGTGTCTATCA+AGG - Chr1:85234440-85234459 None:intergenic 40.0%
TTACCATGGGAATTGGATGA+AGG + Chr1:85238056-85238075 MsG0180004985.01.T01:intron 40.0%
TTACTCACGTGTCATGGAAT+TGG + Chr1:85237202-85237221 MsG0180004985.01.T01:intron 40.0%
TTCTCATTGCTTATTGGTGC+CGG - Chr1:85237590-85237609 None:intergenic 40.0%
TTCTTGAGACCCATCACTTT+GGG + Chr1:85232037-85232056 MsG0180004985.01.T01:intron 40.0%
TTGCTAAATTAGTGGTTGGC+TGG - Chr1:85232420-85232439 None:intergenic 40.0%
TTGGACACAGACTTGCAATA+AGG - Chr1:85238652-85238671 None:intergenic 40.0%
TTGGATCCTGTCGTGTATTA+AGG + Chr1:85237285-85237304 MsG0180004985.01.T01:intron 40.0%
TTGTTGAGGAAGAATTGGAG+AGG + Chr1:85235385-85235404 MsG0180004985.01.T01:CDS 40.0%
TTTCCAATCACCCTCATTAG+AGG + Chr1:85238784-85238803 MsG0180004985.01.T01:intron 40.0%
! AAACATAGGTGTGAAGGTGT+TGG + Chr1:85233229-85233248 MsG0180004985.01.T01:intron 40.0%
! AAATTCTTGCTGTGTGCAAG+AGG + Chr1:85239460-85239479 MsG0180004985.01.T01:CDS 40.0%
! AATTCTTGCTGTGTGCAAGA+GGG + Chr1:85239461-85239480 MsG0180004985.01.T01:CDS 40.0%
! ACCCATTTGGTGAAGGAAAA+AGG - Chr1:85234588-85234607 None:intergenic 40.0%
! AGCTCGAGCTCCAATTTTAT+AGG - Chr1:85231758-85231777 None:intergenic 40.0%
! AGTGAACCATGGGATCTTTT+TGG + Chr1:85234842-85234861 MsG0180004985.01.T01:intron 40.0%
! ATGGTACTGAAACTGTGAGT+GGG - Chr1:85234666-85234685 None:intergenic 40.0%
! CACCTTTTGTTGAAGAAGAG+TGG + Chr1:85235785-85235804 MsG0180004985.01.T01:CDS 40.0%
! CATTCTCTCCCAGTCTTTTT+GGG + Chr1:85235955-85235974 MsG0180004985.01.T01:intron 40.0%
! CCATCTTTTCCGTTTCTCTT+AGG + Chr1:85234515-85234534 MsG0180004985.01.T01:intron 40.0%
! CCATTTGGTGAAGGAAAAAG+GGG - Chr1:85234586-85234605 None:intergenic 40.0%
! CCCATTTGGTGAAGGAAAAA+GGG - Chr1:85234587-85234606 None:intergenic 40.0%
! CCCTAAGTTATACGGCTTTT+TGG + Chr1:85236511-85236530 MsG0180004985.01.T01:intron 40.0%
! CCCTTTTTCCTTCACCAAAT+GGG + Chr1:85234584-85234603 MsG0180004985.01.T01:intron 40.0%
! CGTTTTTGTGCATTTCTCTG+TGG + Chr1:85235684-85235703 MsG0180004985.01.T01:CDS 40.0%
! GAAACATTTTCTGTCTGCAC+TGG + Chr1:85239750-85239769 MsG0180004985.01.T01:three_prime_UTR 40.0%
! GACAAGAAGTATGGAAATGG+GGG + Chr1:85235199-85235218 MsG0180004985.01.T01:CDS 40.0%
! GACTACTGAGGCTTTTGTTA+AGG + Chr1:85238844-85238863 MsG0180004985.01.T01:intron 40.0%
! GACTCTCACAATATCGACTA+TGG - Chr1:85233533-85233552 None:intergenic 40.0%
! GATGGAAAGTATGCCCAAAA+TGG + Chr1:85234070-85234089 MsG0180004985.01.T01:intron 40.0%
! GCTCGAGCTCCAATTTTATA+GGG - Chr1:85231757-85231776 None:intergenic 40.0%
! GGACAAGAAGTATGGAAATG+GGG + Chr1:85235198-85235217 MsG0180004985.01.T01:CDS 40.0%
! GTTCTTGGGTTGTTTGGTAA+CGG + Chr1:85238092-85238111 MsG0180004985.01.T01:intron 40.0%
! GTTTGGAACCCTAACAAACA+AGG + Chr1:85233176-85233195 MsG0180004985.01.T01:intron 40.0%
! TCATTCTCTCCCAGTCTTTT+TGG + Chr1:85235954-85235973 MsG0180004985.01.T01:intron 40.0%
! TTCATGTTCCTCTTTTCTCG+CGG + Chr1:85239137-85239156 MsG0180004985.01.T01:intron 40.0%
!! AGGTATTGGCTTTGGGTTAT+CGG - Chr1:85239565-85239584 None:intergenic 40.0%
!! CAGACTTGTTGAGGAAGAAT+TGG + Chr1:85235380-85235399 MsG0180004985.01.T01:CDS 40.0%
!! CTACCTACTTGTTGTATGGT+GGG + Chr1:85237364-85237383 MsG0180004985.01.T01:intron 40.0%
!! TCGACTTGGACATGAAACAT+AGG + Chr1:85233215-85233234 MsG0180004985.01.T01:intron 40.0%
!! TTGAGGCTTTAGAAGCTGTT+TGG + Chr1:85237236-85237255 MsG0180004985.01.T01:intron 40.0%
!!! GTGAGGGATGCTATTTTTGT+AGG + Chr1:85237513-85237532 MsG0180004985.01.T01:intron 40.0%
!!! TTCATTTTTGAGTGAGGGTG+GGG + Chr1:85231996-85232015 MsG0180004985.01.T01:intron 40.0%
AAAACACACCTCAGTTCAGC+CGG + Chr1:85239812-85239831 MsG0180004985.01.T01:three_prime_UTR 45.0%
AAAACCAGGAGCAAGGAAGT+TGG - Chr1:85234718-85234737 None:intergenic 45.0%
AAAATACCACTCCTGGTCTC+TGG - Chr1:85235168-85235187 None:intergenic 45.0%
AAACTCACACACACAAGTGG+AGG - Chr1:85229750-85229769 None:intergenic 45.0%
AACCCCATATGATCCAAGTC+TGG + Chr1:85238455-85238474 MsG0180004985.01.T01:intron 45.0%
AAGAAAGGTCCATTAAGCCG+AGG - Chr1:85236469-85236488 None:intergenic 45.0%
AAGGATCAGGAATGGTTCCT+GGG + Chr1:85235812-85235831 MsG0180004985.01.T01:CDS 45.0%
AATGTTTCTTCGGAGCAGGT+TGG - Chr1:85239738-85239757 None:intergenic 45.0%
ACCAGAGTGATCCCTTATGT+TGG + Chr1:85237098-85237117 MsG0180004985.01.T01:intron 45.0%
ACTTGCACCCCATATCTCTT+TGG + Chr1:85233034-85233053 MsG0180004985.01.T01:intron 45.0%
AGAGAGGAATATGGATGGGT+AGG + Chr1:85230364-85230383 MsG0180004985.01.T01:intron 45.0%
AGAGAGGGTTGAGATTCATG+AGG + Chr1:85230745-85230764 MsG0180004985.01.T01:intron 45.0%
AGATACGCACCCAAAAAGAC+TGG - Chr1:85235967-85235986 None:intergenic 45.0%
AGCATGGATCCTGACTGTTA+GGG - Chr1:85239656-85239675 None:intergenic 45.0%
AGCCAGACTTGGATCATATG+GGG - Chr1:85238460-85238479 None:intergenic 45.0%
AGGAATATGGATGGGTAGGA+AGG + Chr1:85230368-85230387 MsG0180004985.01.T01:intron 45.0%
AGGATAACAACAATGGGCCA+TGG + Chr1:85234048-85234067 MsG0180004985.01.T01:intron 45.0%
ATGGCTCCTGGCTATTTGAA+AGG + Chr1:85236956-85236975 MsG0180004985.01.T01:intron 45.0%
ATGTAGGTGGAAACTCCATG+TGG + Chr1:85236848-85236867 MsG0180004985.01.T01:intron 45.0%
ATTGTGTGGACAGGAATGAG+AGG - Chr1:85236572-85236591 None:intergenic 45.0%
CAGCACCATTTGATTGGACA+TGG + Chr1:85237627-85237646 MsG0180004985.01.T01:intron 45.0%
CAGGGTCGTCCCTATAAAAT+TGG + Chr1:85231745-85231764 MsG0180004985.01.T01:intron 45.0%
CATCTGCGTCTTGAATGGAA+CGG + Chr1:85235883-85235902 MsG0180004985.01.T01:CDS 45.0%
CATCTTCACGCATTCAGAGA+TGG - Chr1:85238483-85238502 None:intergenic 45.0%
CCAAACATCAAGACGAATGC+AGG - Chr1:85231039-85231058 None:intergenic 45.0%
CCCACAATTCTCGTGACATT+TGG - Chr1:85230584-85230603 None:intergenic 45.0%
CCGGAAATTGGCAAGAAACA+GGG - Chr1:85237999-85238018 None:intergenic 45.0%
CCTGCATTCGTCTTGATGTT+TGG + Chr1:85231036-85231055 MsG0180004985.01.T01:intron 45.0%
CGAGATGGGGAATTAATGGA+GGG - Chr1:85237873-85237892 None:intergenic 45.0%
CTACACCTACTTCGTGTACA+GGG - Chr1:85232102-85232121 None:intergenic 45.0%
CTAGCAAACTTTCAGGGCTT+TGG - Chr1:85238398-85238417 None:intergenic 45.0%
CTAGTGGAACAGGCGATTAA+AGG + Chr1:85238130-85238149 MsG0180004985.01.T01:intron 45.0%
GAAACCTAAAACCAGGAGCA+AGG - Chr1:85234725-85234744 None:intergenic 45.0%
GAAAGACTGAACCCGGAAAT+TGG - Chr1:85238011-85238030 None:intergenic 45.0%
GAAGACTCTGGTGTTCATAG+CGG + Chr1:85235312-85235331 MsG0180004985.01.T01:intron 45.0%
GACTCGAGATGGGGAATTAA+TGG - Chr1:85237877-85237896 None:intergenic 45.0%
GAGAAGTTACTCACGTGTCA+TGG + Chr1:85237196-85237215 MsG0180004985.01.T01:intron 45.0%
GAGAGAGAGAGAGAGGAATA+TGG + Chr1:85230355-85230374 MsG0180004985.01.T01:intron 45.0%
GAGAGAGAGAGGAATATGGA+TGG + Chr1:85230359-85230378 MsG0180004985.01.T01:intron 45.0%
GAGAGGGTTGAGATTCATGA+GGG + Chr1:85230746-85230765 MsG0180004985.01.T01:intron 45.0%
GAGATCACTCCCAATTCCTA+AGG - Chr1:85240048-85240067 None:intergenic 45.0%
GAGATGGGGAATTAATGGAG+GGG - Chr1:85237872-85237891 None:intergenic 45.0%
GAGCCAGACTTGGATCATAT+GGG - Chr1:85238461-85238480 None:intergenic 45.0%
GAGCTGGGTATAATCCTCTT+TGG + Chr1:85238948-85238967 MsG0180004985.01.T01:intron 45.0%
GAGGGTCAAGCAACAAATGA+GGG - Chr1:85234485-85234504 None:intergenic 45.0%
GATACGCACCCAAAAAGACT+GGG - Chr1:85235966-85235985 None:intergenic 45.0%
GATCCCACCATACAACAAGT+AGG - Chr1:85237370-85237389 None:intergenic 45.0%
GATGTACTTTGCAACACTCG+AGG - Chr1:85239873-85239892 None:intergenic 45.0%
GCACTGAAAAATACCACTCC+TGG - Chr1:85235175-85235194 None:intergenic 45.0%
GCTGAATGGTTGTAGGTGAA+TGG + Chr1:85232211-85232230 MsG0180004985.01.T01:intron 45.0%
GGAACATGCACAAAAAGGGA+GGG + Chr1:85230603-85230622 MsG0180004985.01.T01:intron 45.0%
GGAAGGAAACAACTTGGTAG+AGG + Chr1:85238151-85238170 MsG0180004985.01.T01:intron 45.0%
GGCAATCAGAACTCGATGTA+AGG - Chr1:85230433-85230452 None:intergenic 45.0%
GTACGAACAAGTTGTGTGTG+AGG + Chr1:85232365-85232384 MsG0180004985.01.T01:intron 45.0%
GTACTCCCTTAATACACGAC+AGG - Chr1:85237294-85237313 None:intergenic 45.0%
GTAGGGTGAAACCTAAAACC+AGG - Chr1:85234732-85234751 None:intergenic 45.0%
GTCAAGTATTATGGGACGGA+GGG - Chr1:85231459-85231478 None:intergenic 45.0%
GTGGGGAACATGCACAAAAA+GGG + Chr1:85230599-85230618 MsG0180004985.01.T01:intron 45.0%
GTTGAAGAAGAGTGGGAAGA+AGG + Chr1:85235793-85235812 MsG0180004985.01.T01:CDS 45.0%
TAACAACAATGGGCCATGGA+TGG + Chr1:85234052-85234071 MsG0180004985.01.T01:intron 45.0%
TACCTGAAACGCAAGGTTTC+TGG + Chr1:85234773-85234792 MsG0180004985.01.T01:intron 45.0%
TAGATTGTCTATCCCTGGGA+AGG - Chr1:85236786-85236805 None:intergenic 45.0%
TCAACAGGACCATTACTCAC+AGG - Chr1:85235859-85235878 None:intergenic 45.0%
TCAAGGGTAGTTGACTACTG+AGG + Chr1:85238832-85238851 MsG0180004985.01.T01:intron 45.0%
TCCAACATAAGGGATCACTC+TGG - Chr1:85237102-85237121 None:intergenic 45.0%
TCCATGACTCTATCAACACC+TGG - Chr1:85230520-85230539 None:intergenic 45.0%
TCGAGATGGGGAATTAATGG+AGG - Chr1:85237874-85237893 None:intergenic 45.0%
TCTACACCTACTTCGTGTAC+AGG - Chr1:85232103-85232122 None:intergenic 45.0%
TGAAGACAAAGGGAAGAGGA+GGG - Chr1:85238033-85238052 None:intergenic 45.0%
TGACCTCTAATGAGGGTGAT+TGG - Chr1:85238790-85238809 None:intergenic 45.0%
TGAGGGTCAAGCAACAAATG+AGG - Chr1:85234486-85234505 None:intergenic 45.0%
TGAGGTTATCACTGATCAGC+CGG + Chr1:85237568-85237587 MsG0180004985.01.T01:intron 45.0%
TGGAACAGGCGATTAAAGGA+AGG + Chr1:85238134-85238153 MsG0180004985.01.T01:intron 45.0%
TGGCTCCTGGCTATTTGAAA+GGG + Chr1:85236957-85236976 MsG0180004985.01.T01:intron 45.0%
TGTCAAGTATTATGGGACGG+AGG - Chr1:85231460-85231479 None:intergenic 45.0%
TGTGCATTTCTCTGTGGATG+AGG + Chr1:85235690-85235709 MsG0180004985.01.T01:CDS 45.0%
TGTGGGGAACATGCACAAAA+AGG + Chr1:85230598-85230617 MsG0180004985.01.T01:intron 45.0%
TGTTCATCACGTGCTAGTTC+CGG + Chr1:85236336-85236355 MsG0180004985.01.T01:intron 45.0%
TTAGCAGAGGCAAAATTGGC+GGG + Chr1:85232133-85232152 MsG0180004985.01.T01:intron 45.0%
TTATACCCAGCTCAGAGTTC+TGG - Chr1:85238941-85238960 None:intergenic 45.0%
TTCACATTCCGCGAGAAAAG+AGG - Chr1:85239148-85239167 None:intergenic 45.0%
TTCATTCCACCCTAACAGTC+AGG + Chr1:85239644-85239663 MsG0180004985.01.T01:three_prime_UTR 45.0%
TTCCAGAAACCTTGCGTTTC+AGG - Chr1:85234778-85234797 None:intergenic 45.0%
TTCCTCAAGTCAATGCACCT+TGG - Chr1:85232662-85232681 None:intergenic 45.0%
TTCGTGAAGTATACCCGCAT+GGG + Chr1:85238689-85238708 MsG0180004985.01.T01:intron 45.0%
TTCTCTTACCATCAGGAGCA+CGG - Chr1:85235338-85235357 None:intergenic 45.0%
TTGAAGACAAAGGGAAGAGG+AGG - Chr1:85238034-85238053 None:intergenic 45.0%
TTGGCAAGAAACAGGGTAGA+AGG - Chr1:85237992-85238011 None:intergenic 45.0%
TTGGGCATACTTTCCATCCA+TGG - Chr1:85234068-85234087 None:intergenic 45.0%
TTTCCAGTACCCTTGAAGAG+TGG - Chr1:85235239-85235258 None:intergenic 45.0%
TTTCGTGAAGTATACCCGCA+TGG + Chr1:85238688-85238707 MsG0180004985.01.T01:intron 45.0%
TTTGGTGAAGGAAAAAGGGG+TGG - Chr1:85234583-85234602 None:intergenic 45.0%
! AACCTTCTTGACTCGAGATG+GGG - Chr1:85237886-85237905 None:intergenic 45.0%
! ACATTTTCTGTCTGCACTGG+TGG + Chr1:85239753-85239772 MsG0180004985.01.T01:three_prime_UTR 45.0%
! CAACCTTCTTGACTCGAGAT+GGG - Chr1:85237887-85237906 None:intergenic 45.0%
! CCCCTTTTTCCTTCACCAAA+TGG + Chr1:85234583-85234602 MsG0180004985.01.T01:intron 45.0%
! CCCTGTTTCTTGCCAATTTC+CGG + Chr1:85237996-85238015 MsG0180004985.01.T01:intron 45.0%
! CCTGTTTCTTGCCAATTTCC+GGG + Chr1:85237997-85238016 MsG0180004985.01.T01:intron 45.0%
! CGCCGCCTTTTGTAAATTTG+AGG - Chr1:85239585-85239604 None:intergenic 45.0%
! GATGGTACTGAAACTGTGAG+TGG - Chr1:85234667-85234686 None:intergenic 45.0%
! TCAACCTTCTTGACTCGAGA+TGG - Chr1:85237888-85237907 None:intergenic 45.0%
! TGAGATTTTCAACACGGGAC+TGG - Chr1:85239987-85240006 None:intergenic 45.0%
! TGGTACTGAAACTGTGAGTG+GGG - Chr1:85234665-85234684 None:intergenic 45.0%
! TGTTGCTTGACCCTCAATCA+AGG + Chr1:85234490-85234509 MsG0180004985.01.T01:intron 45.0%
!! ACTTCCTTGCTCCTGGTTTT+AGG + Chr1:85234718-85234737 MsG0180004985.01.T01:intron 45.0%
!! ATGCTTTATTGTGGTGGTGG+TGG + Chr1:85237682-85237701 MsG0180004985.01.T01:intron 45.0%
!! ATGGAGGGGTTTTGTAGAAG+AGG - Chr1:85237858-85237877 None:intergenic 45.0%
!! ATTGGCTTTGGGTTATCGGT+TGG - Chr1:85239561-85239580 None:intergenic 45.0%
!! CTACAAGTGCAAGTGCTGAA+TGG + Chr1:85232197-85232216 MsG0180004985.01.T01:intron 45.0%
!! GCATGAGTACAGACTTGTTG+AGG + Chr1:85235371-85235390 MsG0180004985.01.T01:CDS 45.0%
!! GCTACCTACTTGTTGTATGG+TGG + Chr1:85237363-85237382 MsG0180004985.01.T01:intron 45.0%
!! GTTTGCTATGTGCTGCAATG+TGG + Chr1:85235632-85235651 MsG0180004985.01.T01:intron 45.0%
!! TCCAGGTGTTGATAGAGTCA+TGG + Chr1:85230516-85230535 MsG0180004985.01.T01:intron 45.0%
!! TGCAAGTGCTGAATGGTTGT+AGG + Chr1:85232204-85232223 MsG0180004985.01.T01:intron 45.0%
!! TTGGCTTTGGGTTATCGGTT+GGG - Chr1:85239560-85239579 None:intergenic 45.0%
!! TTGGGTTGTTTGGTAACGGA+AGG + Chr1:85238096-85238115 MsG0180004985.01.T01:intron 45.0%
!!! AGGACTCGTTTTGAGTTCGA+TGG - Chr1:85238632-85238651 None:intergenic 45.0%
!!! ATACGGCTTTTTGGGGTTGA+GGG + Chr1:85236520-85236539 MsG0180004985.01.T01:intron 45.0%
!!! CGTGTGTGATGGTTTTGAAC+CGG + Chr1:85236874-85236893 MsG0180004985.01.T01:intron 45.0%
!!! TATACGGCTTTTTGGGGTTG+AGG + Chr1:85236519-85236538 MsG0180004985.01.T01:intron 45.0%
!!! TGCGAGACGAGTTTTAGACT+AGG + Chr1:85231695-85231714 MsG0180004985.01.T01:intron 45.0%
!!! TTCTTTTAGGTGGGTTGGGT+TGG - Chr1:85234368-85234387 None:intergenic 45.0%
AAACAGCCAGAACTCTGAGC+TGG + Chr1:85238932-85238951 MsG0180004985.01.T01:intron 50.0%
AAATCTCACCTGTGGCTGAG+AGG - Chr1:85235430-85235449 None:intergenic 50.0%
AAATGGGGGCAGGATGAACA+GGG + Chr1:85235213-85235232 MsG0180004985.01.T01:CDS 50.0%
AACAGCCAGAACTCTGAGCT+GGG + Chr1:85238933-85238952 MsG0180004985.01.T01:intron 50.0%
AACGACCCTGTACACGAAGT+AGG + Chr1:85232094-85232113 MsG0180004985.01.T01:intron 50.0%
AACTGGACCACCCAAAGTGA+TGG - Chr1:85232050-85232069 None:intergenic 50.0%
AAGCATGACCTAAGGACCGT+GGG + Chr1:85235283-85235302 MsG0180004985.01.T01:intron 50.0%
AAGGTTTGACGTCGGAGCAA+GGG + Chr1:85230461-85230480 MsG0180004985.01.T01:intron 50.0%
AATCTCACCTGTGGCTGAGA+GGG - Chr1:85235429-85235448 None:intergenic 50.0%
ACCACCATCTGCGTCTTGAA+TGG + Chr1:85235878-85235897 MsG0180004985.01.T01:CDS 50.0%
ACTGAAACTGTGAGTGGGGA+GGG - Chr1:85234661-85234680 None:intergenic 50.0%
ACTGGACCACCCAAAGTGAT+GGG - Chr1:85232049-85232068 None:intergenic 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG + Chr1:85230316-85230335 MsG0180004985.01.T01:intron 50.0%
AGGAAGAATTGGAGAGGGAG+AGG + Chr1:85235391-85235410 MsG0180004985.01.T01:CDS 50.0%
AGGAGCAATAAGAGGGTTGG+TGG + Chr1:85231275-85231294 MsG0180004985.01.T01:intron 50.0%
AGGAGGAGCAATAAGAGGGT+TGG + Chr1:85231272-85231291 MsG0180004985.01.T01:intron 50.0%
AGGATCAGGAATGGTTCCTG+GGG + Chr1:85235813-85235832 MsG0180004985.01.T01:CDS 50.0%
AGGGAGGAGGAGCAATAAGA+GGG + Chr1:85231268-85231287 MsG0180004985.01.T01:intron 50.0%
AGTGGTTATGTGGACGAGCA+TGG - Chr1:85239672-85239691 None:intergenic 50.0%
ATCGTGGCCAGAAGAAGTTG+GGG - Chr1:85237788-85237807 None:intergenic 50.0%
ATGAACAGGGCCACTCTTCA+AGG + Chr1:85235226-85235245 MsG0180004985.01.T01:CDS 50.0%
ATGCGAAAGTTTGCCTTCCC+AGG + Chr1:85236770-85236789 MsG0180004985.01.T01:intron 50.0%
ATGGATCCTGACTGTTAGGG+TGG - Chr1:85239653-85239672 None:intergenic 50.0%
CAACTTCTTCTGGCCACGAT+GGG + Chr1:85237788-85237807 MsG0180004985.01.T01:intron 50.0%
CACAAAAAGGGAGGGTAGAG+AGG + Chr1:85230611-85230630 MsG0180004985.01.T01:intron 50.0%
CACACGATTCAAGATTCGCC+AGG - Chr1:85239848-85239867 None:intergenic 50.0%
CAGAGTCTTCTTCAACCCCA+CGG - Chr1:85235302-85235321 None:intergenic 50.0%
CAGGGTAGAAGGAGAAAAGG+AGG - Chr1:85237981-85238000 None:intergenic 50.0%
CATCGTGGCCAGAAGAAGTT+GGG - Chr1:85237789-85237808 None:intergenic 50.0%
CCAGAAGAAGTTGGGGGTAA+GGG - Chr1:85237781-85237800 None:intergenic 50.0%
CCATCACACACGATACCACA+TGG - Chr1:85236866-85236885 None:intergenic 50.0%
CCATGTGGTATCGTGTGTGA+TGG + Chr1:85236863-85236882 MsG0180004985.01.T01:intron 50.0%
CCCGGAAATTGGCAAGAAAC+AGG - Chr1:85238000-85238019 None:intergenic 50.0%
CCTTGACTTCCTTCAACACG+CGG - Chr1:85237928-85237947 None:intergenic 50.0%
CGCGTGTTGAAGGAAGTCAA+GGG + Chr1:85237926-85237945 MsG0180004985.01.T01:intron 50.0%
CGTTCCATTCAAGACGCAGA+TGG - Chr1:85235885-85235904 None:intergenic 50.0%
CTAGAATCACTGATGGCACG+TGG + Chr1:85236803-85236822 MsG0180004985.01.T01:intron 50.0%
CTCACAGGACCATTACTCAC+AGG - Chr1:85235844-85235863 None:intergenic 50.0%
GAAACAACTTGGTAGAGGCC+AGG + Chr1:85238156-85238175 MsG0180004985.01.T01:intron 50.0%
GAAGAGTGGGAAGAAGGATC+AGG + Chr1:85235799-85235818 MsG0180004985.01.T01:CDS 50.0%
GAAGGATCAGGAATGGTTCC+TGG + Chr1:85235811-85235830 MsG0180004985.01.T01:CDS 50.0%
GAGAGAGAGAGAGAGAGAGA+GGG + Chr1:85230317-85230336 MsG0180004985.01.T01:intron 50.0%
GAGCATGGATCCTGACTGTT+AGG - Chr1:85239657-85239676 None:intergenic 50.0%
GAGGTTCTTCGTGACCCATT+TGG - Chr1:85234601-85234620 None:intergenic 50.0%
GATCATAGAGGTGGACCCAT+TGG + Chr1:85230483-85230502 MsG0180004985.01.T01:intron 50.0%
GCATACCGTTGTCCATTTGG+AGG - Chr1:85235766-85235785 None:intergenic 50.0%
GCGTTCCGGCATAAATGGAA+AGG - Chr1:85236410-85236429 None:intergenic 50.0%
GGAAGAATTGGAGAGGGAGA+GGG + Chr1:85235392-85235411 MsG0180004985.01.T01:CDS 50.0%
GGAGCCAGACTTGGATCATA+TGG - Chr1:85238462-85238481 None:intergenic 50.0%
GGCATCCGGCCTAACAATTT+CGG - Chr1:85229703-85229722 None:intergenic 50.0%
GGGAACATGCACAAAAAGGG+AGG + Chr1:85230602-85230621 MsG0180004985.01.T01:intron 50.0%
GGGGTGCAAGTCATCCATAA+AGG - Chr1:85233025-85233044 None:intergenic 50.0%
GGTGAATGGAACCACGTGTA+AGG + Chr1:85232225-85232244 MsG0180004985.01.T01:intron 50.0%
GGTGCATACCGTTGTCCATT+TGG - Chr1:85235769-85235788 None:intergenic 50.0%
GGTGGAGTTTCATGCAGTGA+AGG + Chr1:85235904-85235923 MsG0180004985.01.T01:CDS 50.0%
GGTTGATTGTGGTGGCAGAT+GGG - Chr1:85234640-85234659 None:intergenic 50.0%
GTCCAGTGAAGCATGACCTA+AGG + Chr1:85235275-85235294 MsG0180004985.01.T01:intron 50.0%
GTCCTTAGGTCATGCTTCAC+TGG - Chr1:85235280-85235299 None:intergenic 50.0%
GTGGGAAGAAGGATCAGGAA+TGG + Chr1:85235804-85235823 MsG0180004985.01.T01:CDS 50.0%
GTTGATTGTGGTGGCAGATG+GGG - Chr1:85234639-85234658 None:intergenic 50.0%
TACTGAAACTGTGAGTGGGG+AGG - Chr1:85234662-85234681 None:intergenic 50.0%
TAGATACGATGGAGTGCGCA+CGG + Chr1:85232172-85232191 MsG0180004985.01.T01:intron 50.0%
TCAGCGCAGCCTAAGAGAAA+CGG - Chr1:85234527-85234546 None:intergenic 50.0%
TCCACAAGTCCTAGCTCAAC+TGG + Chr1:85229671-85229690 MsG0180004985.01.T01:CDS 50.0%
TCCATTCAAGACGCAGATGG+TGG - Chr1:85235882-85235901 None:intergenic 50.0%
TGAACAGGGCCACTCTTCAA+GGG + Chr1:85235227-85235246 MsG0180004985.01.T01:CDS 50.0%
TGCGAAAGTTTGCCTTCCCA+GGG + Chr1:85236771-85236790 MsG0180004985.01.T01:intron 50.0%
TTCAGAGATGGAGCCAGACT+TGG - Chr1:85238471-85238490 None:intergenic 50.0%
TTCCAGCGTTCCGGCATAAA+TGG - Chr1:85236415-85236434 None:intergenic 50.0%
TTCCATTTATGCCGGAACGC+TGG + Chr1:85236410-85236429 MsG0180004985.01.T01:intron 50.0%
TTCCCCATCTCGAGTCAAGA+AGG + Chr1:85237881-85237900 MsG0180004985.01.T01:intron 50.0%
TTCGCCAGGTCAAAATCTGC+CGG - Chr1:85239834-85239853 None:intergenic 50.0%
TTGAGACCCATCACTTTGGG+TGG + Chr1:85232040-85232059 MsG0180004985.01.T01:intron 50.0%
TTGATTGTGGTGGCAGATGG+GGG - Chr1:85234638-85234657 None:intergenic 50.0%
TTGGGCCTCCAAATGGACAA+CGG + Chr1:85235758-85235777 MsG0180004985.01.T01:CDS 50.0%
TTGTCGCTGCAGTGGTTATG+TGG - Chr1:85239682-85239701 None:intergenic 50.0%
TTTCTCTGTGGATGAGGAGC+AGG + Chr1:85235696-85235715 MsG0180004985.01.T01:CDS 50.0%
! AAAATCTGCCGGCTGAACTG+AGG - Chr1:85239823-85239842 None:intergenic 50.0%
! ACACACACAAGTGGAGGTAC+CGG - Chr1:85229744-85229763 None:intergenic 50.0%
! AGAAGTATGGAAATGGGGGC+AGG + Chr1:85235203-85235222 MsG0180004985.01.T01:CDS 50.0%
! CAACTTGTTCGTACTGCAGC+AGG - Chr1:85232359-85232378 None:intergenic 50.0%
! CTCTTGATGGCTAGTGGAAC+AGG + Chr1:85238120-85238139 MsG0180004985.01.T01:intron 50.0%
! CTTCGTGACCCATTTGGTGA+AGG - Chr1:85234595-85234614 None:intergenic 50.0%
! GAAGGACTCTTGATGGCTAG+TGG + Chr1:85238114-85238133 MsG0180004985.01.T01:intron 50.0%
! GGCAGCTTGTTCACATCAAG+TGG - Chr1:85239427-85239446 None:intergenic 50.0%
! GGTTATCGGTTGGGGGTAAT+GGG - Chr1:85239551-85239570 None:intergenic 50.0%
!! AGCCAAGGTGCATTGACTTG+AGG + Chr1:85232657-85232676 MsG0180004985.01.T01:intron 50.0%
!! CAAGGGTACTGGAAAGCTAC+TGG + Chr1:85235244-85235263 MsG0180004985.01.T01:intron 50.0%
!! CACAGAGCTTGGTGTTGAGA+AGG + Chr1:85239912-85239931 MsG0180004985.01.T01:three_prime_UTR 50.0%
!! CTTTATTGTGGTGGTGGTGG+TGG + Chr1:85237685-85237704 MsG0180004985.01.T01:intron 50.0%
!! GAGGGGTTTTGTAGAAGAGG+TGG - Chr1:85237855-85237874 None:intergenic 50.0%
!! GGTAACGGAAGGACTCTTGA+TGG + Chr1:85238107-85238126 MsG0180004985.01.T01:intron 50.0%
!! TGGCTTTGGGTTATCGGTTG+GGG - Chr1:85239559-85239578 None:intergenic 50.0%
!!! CGTACTGCAGCAGGCTTTTT+TGG - Chr1:85232350-85232369 None:intergenic 50.0%
!!! GTGATGGTTTTGAACCGGCT+CGG + Chr1:85236879-85236898 MsG0180004985.01.T01:intron 50.0%
AACACGCGGCTAGAGAGAGA+AGG - Chr1:85237914-85237933 None:intergenic 55.0%
AATTGGAGAGGGAGAGGGCT+GGG + Chr1:85235397-85235416 MsG0180004985.01.T01:CDS 55.0%
ACCAGGAGCAAGGAAGTTGG+TGG - Chr1:85234715-85234734 None:intergenic 55.0%
AGAGAGAGAGAGAGAGGGAG+AGG + Chr1:85231248-85231267 MsG0180004985.01.T01:intron 55.0%
AGCATGACCTAAGGACCGTG+GGG + Chr1:85235284-85235303 MsG0180004985.01.T01:intron 55.0%
CAAGCTGAAGACCAGAGACC+AGG + Chr1:85235154-85235173 MsG0180004985.01.T01:CDS 55.0%
CATAGAGGTGGACCCATTGG+CGG + Chr1:85230486-85230505 MsG0180004985.01.T01:intron 55.0%
CCAACTTCTTCTGGCCACGA+TGG + Chr1:85237787-85237806 MsG0180004985.01.T01:intron 55.0%
CCATCGTGGCCAGAAGAAGT+TGG - Chr1:85237790-85237809 None:intergenic 55.0%
CCCTTACCCCCAACTTCTTC+TGG + Chr1:85237778-85237797 MsG0180004985.01.T01:intron 55.0%
CCGCGTGTTGAAGGAAGTCA+AGG + Chr1:85237925-85237944 MsG0180004985.01.T01:intron 55.0%
CGGCATTTGCCAGTTGAGCT+AGG - Chr1:85229683-85229702 None:intergenic 55.0%
CGTGGGGTTGAAGAAGACTC+TGG + Chr1:85235300-85235319 MsG0180004985.01.T01:intron 55.0%
CGTGTACAGGGTCGTTCCTT+GGG - Chr1:85232090-85232109 None:intergenic 55.0%
CTGCGTCTTGAATGGAACGG+TGG + Chr1:85235886-85235905 MsG0180004985.01.T01:CDS 55.0%
CTGGAATTCGCACCGCCAAT+GGG - Chr1:85230501-85230520 None:intergenic 55.0%
GAAATGGGGGCAGGATGAAC+AGG + Chr1:85235212-85235231 MsG0180004985.01.T01:CDS 55.0%
GAAGCAGAAGCAGAAGGCGA+TGG - Chr1:85234685-85234704 None:intergenic 55.0%
GAAGCATGACCTAAGGACCG+TGG + Chr1:85235282-85235301 MsG0180004985.01.T01:intron 55.0%
GAAGGTTTGACGTCGGAGCA+AGG + Chr1:85230460-85230479 MsG0180004985.01.T01:intron 55.0%
GAGAGAGAGAGAGAGGGAGA+GGG + Chr1:85231249-85231268 MsG0180004985.01.T01:intron 55.0%
GAGGAGGGAAAGACTGAACC+CGG - Chr1:85238018-85238037 None:intergenic 55.0%
GAGGGAGGAGGAGCAATAAG+AGG + Chr1:85231267-85231286 MsG0180004985.01.T01:intron 55.0%
GCAGAGTGAGACACAGAGCT+TGG + Chr1:85239901-85239920 MsG0180004985.01.T01:three_prime_UTR 55.0%
GCCAGAAGAAGTTGGGGGTA+AGG - Chr1:85237782-85237801 None:intergenic 55.0%
GCCAGTTGAGCTAGGACTTG+TGG - Chr1:85229675-85229694 None:intergenic 55.0%
GCCTTCTGCTTCTGCTTCTG+CGG + Chr1:85234687-85234706 MsG0180004985.01.T01:intron 55.0%
GGAGAAAAGGAGGTGAGCTG+TGG - Chr1:85237971-85237990 None:intergenic 55.0%
GGAGCAAGGGATCATAGAGG+TGG + Chr1:85230474-85230493 MsG0180004985.01.T01:intron 55.0%
GGATGGGTAGGAAGGTGAGA+AGG + Chr1:85230376-85230395 MsG0180004985.01.T01:intron 55.0%
GGGGGTGGAGGAAGTAAAAG+AGG - Chr1:85234620-85234639 None:intergenic 55.0%
GGTGAAGGAAAAAGGGGTGG+TGG - Chr1:85234580-85234599 None:intergenic 55.0%
GTCGGAGCAAGGGATCATAG+AGG + Chr1:85230471-85230490 MsG0180004985.01.T01:intron 55.0%
GTGACAGCAGCAGCAGTTGT+CGG - Chr1:85239710-85239729 None:intergenic 55.0%
GTGCGCACTCCATCGTATCT+AGG - Chr1:85232173-85232192 None:intergenic 55.0%
TCCCAGACACAACTCCCATG+CGG - Chr1:85238706-85238725 None:intergenic 55.0%
TCGAAAGAGGATGCCCATCG+TGG - Chr1:85237804-85237823 None:intergenic 55.0%
TCGTGGCCAGAAGAAGTTGG+GGG - Chr1:85237787-85237806 None:intergenic 55.0%
TCGTGTACAGGGTCGTTCCT+TGG - Chr1:85232091-85232110 None:intergenic 55.0%
TCTCTCTAGCCGCGTGTTGA+AGG + Chr1:85237916-85237935 MsG0180004985.01.T01:intron 55.0%
TCTTCAACCCCACGGTCCTT+AGG - Chr1:85235294-85235313 None:intergenic 55.0%
TGAAGACCAGAGACCAGGAG+TGG + Chr1:85235159-85235178 MsG0180004985.01.T01:CDS 55.0%
TGACAGCAGCAGCAGTTGTC+GGG - Chr1:85239709-85239728 None:intergenic 55.0%
TGGGTAGGAAGGTGAGAAGG+AGG + Chr1:85230379-85230398 MsG0180004985.01.T01:intron 55.0%
! AACGGTTGGCCCCAACTACA+AGG - Chr1:85236909-85236928 None:intergenic 55.0%
! AACTACAAGGTGCTCCGAGC+CGG - Chr1:85236896-85236915 None:intergenic 55.0%
! AGACGCAGATGGTGGTCAAC+AGG - Chr1:85235874-85235893 None:intergenic 55.0%
! CCAGGAGCAAGGAAGTTGGT+GGG - Chr1:85234714-85234733 None:intergenic 55.0%
! CTCGGAGCACCTTGTAGTTG+GGG + Chr1:85236897-85236916 MsG0180004985.01.T01:intron 55.0%
! GAAGGAAAAAGGGGTGGTGG+TGG - Chr1:85234577-85234596 None:intergenic 55.0%
! GCTCGGAGCACCTTGTAGTT+GGG + Chr1:85236896-85236915 MsG0180004985.01.T01:intron 55.0%
! GGGTTATCGGTTGGGGGTAA+TGG - Chr1:85239552-85239571 None:intergenic 55.0%
! GGGTTGATTGTGGTGGCAGA+TGG - Chr1:85234641-85234660 None:intergenic 55.0%
! TGAGTGGGGAGGGTTGATTG+TGG - Chr1:85234651-85234670 None:intergenic 55.0%
!! ACACACAAGTGGAGGTACCG+GGG - Chr1:85229742-85229761 None:intergenic 55.0%
!! CACACACAAGTGGAGGTACC+GGG - Chr1:85229743-85229762 None:intergenic 55.0%
!! CAGGAGCAAGGAAGTTGGTG+GGG - Chr1:85234713-85234732 None:intergenic 55.0%
!! GGCTTTGGGTTATCGGTTGG+GGG - Chr1:85239558-85239577 None:intergenic 55.0%
!! TATTGTGGTGGTGGTGGTGG+TGG + Chr1:85237688-85237707 MsG0180004985.01.T01:intron 55.0%
!! TCAGCCGGCAGATTTTGACC+TGG + Chr1:85239827-85239846 MsG0180004985.01.T01:three_prime_UTR 55.0%
ACCCGCATGGGAGTTGTGTC+TGG + Chr1:85238701-85238720 MsG0180004985.01.T01:intron 60.0%
AGAGAGAGAGAGGGAGAGGG+AGG + Chr1:85231252-85231271 MsG0180004985.01.T01:intron 60.0%
ATTGGAGAGGGAGAGGGCTG+GGG + Chr1:85235398-85235417 MsG0180004985.01.T01:CDS 60.0%
ATTGTGGTGGCAGATGGGGG+TGG - Chr1:85234635-85234654 None:intergenic 60.0%
CAAACCCCGGTCATGGCATC+CGG - Chr1:85229717-85229736 None:intergenic 60.0%
CCATTGGCGGTGCGAATTCC+AGG + Chr1:85230499-85230518 MsG0180004985.01.T01:intron 60.0%
CCCACCAACTTCCTTGCTCC+TGG + Chr1:85234711-85234730 MsG0180004985.01.T01:intron 60.0%
CCCAGACACAACTCCCATGC+GGG - Chr1:85238705-85238724 None:intergenic 60.0%
CCCGCATGGGAGTTGTGTCT+GGG + Chr1:85238702-85238721 MsG0180004985.01.T01:intron 60.0%
CCTGGAATTCGCACCGCCAA+TGG - Chr1:85230502-85230521 None:intergenic 60.0%
CTAGGGAAACCCCAACCCCT+AGG + Chr1:85238251-85238270 MsG0180004985.01.T01:intron 60.0%
CTCTGTGGATGAGGAGCAGG+AGG + Chr1:85235699-85235718 MsG0180004985.01.T01:CDS 60.0%
CTGATGGCACGTGGCTCAGT+TGG + Chr1:85236812-85236831 MsG0180004985.01.T01:intron 60.0%
GAATTGGAGAGGGAGAGGGC+TGG + Chr1:85235396-85235415 MsG0180004985.01.T01:CDS 60.0%
GCCGCAGAAGCAGAAGCAGA+AGG - Chr1:85234691-85234710 None:intergenic 60.0%
GGACAAGGGTTCCAGCGTTC+CGG - Chr1:85236424-85236443 None:intergenic 60.0%
GGGGCTGAGCCTGTGAGTAA+TGG + Chr1:85235832-85235851 MsG0180004985.01.T01:CDS 60.0%
GTTAGGCCGGATGCCATGAC+CGG + Chr1:85229708-85229727 MsG0180004985.01.T01:CDS 60.0%
GTTGGGGCCAACCGTTTCAC+AGG + Chr1:85236913-85236932 MsG0180004985.01.T01:intron 60.0%
TTACTCACAGGCTCAGCCCC+AGG - Chr1:85235832-85235851 None:intergenic 60.0%
TTAGGCCGGATGCCATGACC+GGG + Chr1:85229709-85229728 MsG0180004985.01.T01:CDS 60.0%
! GGCTCGGAGCACCTTGTAGT+TGG + Chr1:85236895-85236914 MsG0180004985.01.T01:intron 60.0%
! GGGCCACTCTTCAAGGGTAC+TGG + Chr1:85235233-85235252 MsG0180004985.01.T01:intron 60.0%
! GTGGGGAGGGTTGATTGTGG+TGG - Chr1:85234648-85234667 None:intergenic 60.0%
!! GGAAAAAGGGGTGGTGGTGG+CGG - Chr1:85234574-85234593 None:intergenic 60.0%
!! GGTGGTGGCGGTGGTAAAGA+TGG - Chr1:85234562-85234581 None:intergenic 60.0%
!! TGGTGGTGGTGGTGGTGGTT+GGG + Chr1:85237696-85237715 MsG0180004985.01.T01:intron 60.0%
CATAGCGGCCGTGCTCCTGA+TGG + Chr1:85235327-85235346 MsG0180004985.01.T01:intron 65.0%
CATGACCGGGGTTTGAGCCC+CGG + Chr1:85229722-85229741 MsG0180004985.01.T01:intron 65.0%
CGGGAGAGTTGTCGCTGCAG+TGG - Chr1:85239690-85239709 None:intergenic 65.0%
GAGAGAGAGGGAGAGGGAGG+AGG + Chr1:85231255-85231274 MsG0180004985.01.T01:intron 65.0%
TAGGCCGGATGCCATGACCG+GGG + Chr1:85229710-85229729 MsG0180004985.01.T01:CDS 65.0%
!! AAAAGGGGTGGTGGTGGCGG+TGG - Chr1:85234571-85234590 None:intergenic 65.0%
!! AGGTACCGGGGCTCAAACCC+CGG - Chr1:85229730-85229749 None:intergenic 65.0%
!! GGTGGTGGTGGTGGTGGTTG+GGG + Chr1:85237697-85237716 MsG0180004985.01.T01:intron 65.0%
!! GTGGTGGTGGTGGTGGTGGT+TGG + Chr1:85237692-85237711 MsG0180004985.01.T01:intron 65.0%
!! GTGGTGGTGGTGGTGGTTGG+GGG + Chr1:85237698-85237717 MsG0180004985.01.T01:intron 65.0%
!! TGGTGGTGGTGGTGGTTGGG+GGG + Chr1:85237699-85237718 MsG0180004985.01.T01:intron 65.0%
!! TGTGGTGGTGGTGGTGGTGG+TGG + Chr1:85237691-85237710 MsG0180004985.01.T01:intron 65.0%
CGGGGCTCAAACCCCGGTCA+TGG - Chr1:85229724-85229743 None:intergenic 70.0%
GGCTGGACCCTCTCAGCCAC+AGG + Chr1:85235419-85235438 MsG0180004985.01.T01:CDS 70.0%
GTGGTGGCAGATGGGGGTGG+AGG - Chr1:85234632-85234651 None:intergenic 70.0%
!! GGTGGTGGTGGTGGTTGGGG+GGG + Chr1:85237700-85237719 MsG0180004985.01.T01:intron 70.0%
GAGAGGGAGAGGGCTGGGGC+TGG + Chr1:85235402-85235421 MsG0180004985.01.T01:CDS 75.0%
Chromosome Type Strat End Strand Name
Chr1 gene 85229663 85240225 85229663 ID=MsG0180004985.01;Name=MsG0180004985.01
Chr1 mRNA 85229663 85240225 85229663 ID=MsG0180004985.01.T01;Parent=MsG0180004985.01;Name=MsG0180004985.01.T01;_AED=0.20;_eAED=0.23;_QI=0|0.25|0.2|0.8|1|1|5|733|227
Chr1 exon 85229663 85229731 85229663 ID=MsG0180004985.01.T01:exon:28088;Parent=MsG0180004985.01.T01
Chr1 exon 85235148 85235248 85235148 ID=MsG0180004985.01.T01:exon:28089;Parent=MsG0180004985.01.T01
Chr1 exon 85235332 85235481 85235332 ID=MsG0180004985.01.T01:exon:28090;Parent=MsG0180004985.01.T01
Chr1 exon 85235675 85235945 85235675 ID=MsG0180004985.01.T01:exon:28091;Parent=MsG0180004985.01.T01
Chr1 exon 85239400 85240225 85239400 ID=MsG0180004985.01.T01:exon:28092;Parent=MsG0180004985.01.T01
Chr1 CDS 85229663 85229731 85229663 ID=MsG0180004985.01.T01:cds;Parent=MsG0180004985.01.T01
Chr1 CDS 85235148 85235248 85235148 ID=MsG0180004985.01.T01:cds;Parent=MsG0180004985.01.T01
Chr1 CDS 85235332 85235481 85235332 ID=MsG0180004985.01.T01:cds;Parent=MsG0180004985.01.T01
Chr1 CDS 85235675 85235945 85235675 ID=MsG0180004985.01.T01:cds;Parent=MsG0180004985.01.T01
Chr1 CDS 85239400 85239492 85239400 ID=MsG0180004985.01.T01:cds;Parent=MsG0180004985.01.T01
Chr1 three_prime_UTR 85239493 85240225 85239493 ID=MsG0180004985.01.T01:three_prime_utr;Parent=MsG0180004985.01.T01
Gene Sequence

>MsG0180004985.01.T01

ATGAAAAATCCACAAGTCCTAGCTCAACTGGCAAATGCCGAAATTGTTAGGCCGGATGCCATGACCGGGATAAGTCAAGCTGAAGACCAGAGACCAGGAGTGGTATTTTTCAGTGCATTGGACAAGAAGTATGGAAATGGGGGCAGGATGAACAGGGCCACTCTTCAAGGCGGCCGTGCTCCTGATGGTAAGAGAACAAATTGGGTCATGCATGAGTACAGACTTGTTGAGGAAGAATTGGAGAGGGAGAGGGCTGGGGCTGGACCCTCTCAGCCACAGGTGAGATTTTACAAATTTCAGAAATTGAAGTATCCTAAACTCTGGTTAATCGTTTTTGTGCATTTCTCTGTGGATGAGGAGCAGGAGGCATTTGTGTTGTGTAGAGTGTTTCACAAGAATAACATTGGGCCTCCAAATGGACAACGGTATGCACCTTTTGTTGAAGAAGAGTGGGAAGAAGGATCAGGAATGGTTCCTGGGGCTGAGCCTGTGAGTAATGGTCCTGTGAGTAATGGTCCTGTTGACCACCATCTGCGTCTTGAATGGAACGGTGGAGTTTCATGCAGTGAAGGAAGAAATCATGTTGTGCAGGACACTCAATCCAACAACAAAACTCCACTTGATGTGAACAAGCTGCCGATCGAAACTCAAAAATTCTTGCTGTGTGCAAGAGGGAGAGCATGA
Protein sequence

>MsG0180004985.01.T01

MKNPQVLAQLANAEIVRPDAMTGISQAEDQRPGVVFFSALDKKYGNGGRMNRATLQGGRAPDGKRTNWVMHEYRLVEEELERERAGAGPSQPQVRFYKFQKLKYPKLWLIVFVHFSVDEEQEAFVLCRVFHKNNIGPPNGQRYAPFVEEEWEEGSGMVPGAEPVSNGPVSNGPVDHHLRLEWNGGVSCSEGRNHVVQDTQSNNKTPLDVNKLPIETQKFLLCARGRA*