Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180005067.01.T01 | XP_003591795.2 | 96.825 | 378 | 12 | 0 | 1 | 378 | 1 | 378 | 0 | 762 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180005067.01.T01 | Q8VZS3 | 47.929 | 338 | 126 | 12 | 10 | 326 | 16 | 324 | 1.56E-78 | 248 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180005067.01.T01 | G7I465 | 96.825 | 378 | 12 | 0 | 1 | 378 | 1 | 378 | 0.0 | 762 |
Gene ID | Type | Classification |
---|---|---|
MsG0180005067.01.T01 | TF | GARP-G2-like |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0180005067.01 | MsG0180005090.01 | 0.947769 | 3.523283e-106 | 6.278439e-101 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180005067.01.T01 | MTR_1g093080 | 96.825 | 378 | 12 | 0 | 1 | 378 | 1 | 378 | 0.0 | 762 |
MsG0180005067.01.T01 | MTR_1g093080 | 97.318 | 261 | 7 | 0 | 1 | 261 | 1 | 261 | 0.0 | 530 |
MsG0180005067.01.T01 | MTR_1g093080 | 97.034 | 236 | 7 | 0 | 1 | 236 | 1 | 236 | 4.51e-172 | 479 |
MsG0180005067.01.T01 | MTR_5g054300 | 57.368 | 380 | 126 | 14 | 1 | 374 | 10 | 359 | 1.27e-125 | 366 |
MsG0180005067.01.T01 | MTR_4g113140 | 35.404 | 322 | 144 | 7 | 2 | 294 | 29 | 315 | 2.00e-48 | 169 |
MsG0180005067.01.T01 | MTR_4g086835 | 34.930 | 355 | 146 | 11 | 10 | 309 | 44 | 368 | 1.14e-42 | 154 |
MsG0180005067.01.T01 | MTR_4g086835 | 34.930 | 355 | 145 | 12 | 10 | 309 | 44 | 367 | 6.33e-41 | 149 |
MsG0180005067.01.T01 | MTR_5g017980 | 33.333 | 330 | 143 | 12 | 2 | 324 | 35 | 294 | 1.17e-33 | 127 |
MsG0180005067.01.T01 | MTR_5g017980 | 33.435 | 329 | 142 | 12 | 2 | 324 | 35 | 292 | 2.89e-33 | 126 |
MsG0180005067.01.T01 | MTR_5g017980 | 33.636 | 330 | 141 | 13 | 2 | 324 | 35 | 293 | 6.19e-32 | 123 |
MsG0180005067.01.T01 | MTR_7g115530 | 34.437 | 151 | 89 | 3 | 162 | 304 | 161 | 309 | 1.42e-15 | 77.8 |
MsG0180005067.01.T01 | MTR_2g027860 | 56.061 | 66 | 29 | 0 | 211 | 276 | 49 | 114 | 1.44e-15 | 77.4 |
MsG0180005067.01.T01 | MTR_2g034960 | 37.008 | 127 | 57 | 4 | 210 | 323 | 210 | 326 | 3.07e-15 | 77.8 |
MsG0180005067.01.T01 | MTR_2g450070 | 38.462 | 117 | 63 | 4 | 209 | 323 | 211 | 320 | 8.49e-15 | 76.3 |
MsG0180005067.01.T01 | MTR_4g121020 | 53.521 | 71 | 32 | 1 | 210 | 280 | 110 | 179 | 9.00e-15 | 76.3 |
MsG0180005067.01.T01 | MTR_2g450070 | 38.462 | 117 | 63 | 4 | 209 | 323 | 211 | 320 | 9.39e-15 | 76.3 |
MsG0180005067.01.T01 | MTR_4g121020 | 53.521 | 71 | 32 | 1 | 210 | 280 | 214 | 283 | 9.67e-15 | 76.3 |
MsG0180005067.01.T01 | MTR_4g121020 | 53.521 | 71 | 32 | 1 | 210 | 280 | 214 | 283 | 9.94e-15 | 76.3 |
MsG0180005067.01.T01 | MTR_7g088070 | 54.167 | 72 | 31 | 1 | 211 | 280 | 50 | 121 | 1.17e-14 | 73.9 |
MsG0180005067.01.T01 | MTR_7g088070 | 55.385 | 65 | 29 | 0 | 211 | 275 | 50 | 114 | 1.51e-14 | 73.6 |
MsG0180005067.01.T01 | MTR_4g131580 | 53.968 | 63 | 28 | 1 | 209 | 271 | 198 | 259 | 2.43e-14 | 74.7 |
MsG0180005067.01.T01 | MTR_1g032570 | 48.611 | 72 | 36 | 1 | 200 | 271 | 120 | 190 | 3.24e-14 | 74.3 |
MsG0180005067.01.T01 | MTR_1g032570 | 48.611 | 72 | 36 | 1 | 200 | 271 | 189 | 259 | 4.29e-14 | 74.3 |
MsG0180005067.01.T01 | MTR_3g102600 | 43.038 | 79 | 43 | 2 | 215 | 292 | 87 | 164 | 5.15e-14 | 70.1 |
MsG0180005067.01.T01 | MTR_3g106220 | 45.679 | 81 | 42 | 2 | 204 | 284 | 191 | 269 | 5.53e-14 | 73.9 |
MsG0180005067.01.T01 | MTR_7g115530 | 37.815 | 119 | 66 | 2 | 162 | 272 | 161 | 279 | 7.15e-14 | 72.0 |
MsG0180005067.01.T01 | MTR_7g117705 | 48.611 | 72 | 36 | 1 | 209 | 280 | 189 | 259 | 8.69e-14 | 72.8 |
MsG0180005067.01.T01 | MTR_5g014040 | 51.515 | 66 | 31 | 1 | 204 | 269 | 304 | 368 | 8.96e-14 | 73.2 |
MsG0180005067.01.T01 | MTR_7g115530 | 37.815 | 119 | 66 | 2 | 162 | 272 | 161 | 279 | 1.17e-13 | 71.6 |
MsG0180005067.01.T01 | MTR_5g041350 | 61.818 | 55 | 21 | 0 | 211 | 265 | 15 | 69 | 1.25e-13 | 71.6 |
MsG0180005067.01.T01 | MTR_3g102600 | 43.038 | 79 | 43 | 2 | 215 | 292 | 136 | 213 | 1.25e-13 | 70.1 |
MsG0180005067.01.T01 | MTR_4g131570 | 50.000 | 66 | 32 | 1 | 206 | 271 | 198 | 262 | 1.35e-13 | 72.4 |
MsG0180005067.01.T01 | MTR_7g115530 | 54.839 | 62 | 28 | 0 | 211 | 272 | 218 | 279 | 2.79e-13 | 71.2 |
MsG0180005067.01.T01 | MTR_4g098870 | 41.489 | 94 | 51 | 2 | 178 | 268 | 274 | 366 | 2.86e-13 | 71.6 |
MsG0180005067.01.T01 | MTR_1g013170 | 52.381 | 63 | 29 | 1 | 209 | 271 | 189 | 250 | 2.90e-13 | 71.2 |
MsG0180005067.01.T01 | MTR_4g098870 | 41.489 | 94 | 51 | 2 | 178 | 268 | 294 | 386 | 3.30e-13 | 71.2 |
MsG0180005067.01.T01 | MTR_4g098870 | 41.489 | 94 | 51 | 2 | 178 | 268 | 274 | 366 | 3.32e-13 | 71.2 |
MsG0180005067.01.T01 | MTR_7g098250 | 43.902 | 82 | 44 | 1 | 211 | 292 | 262 | 341 | 3.39e-13 | 71.2 |
MsG0180005067.01.T01 | MTR_4g098870 | 41.489 | 94 | 51 | 2 | 178 | 268 | 294 | 386 | 3.50e-13 | 71.2 |
MsG0180005067.01.T01 | MTR_4g098870 | 41.489 | 94 | 51 | 2 | 178 | 268 | 313 | 405 | 3.65e-13 | 71.2 |
MsG0180005067.01.T01 | MTR_2g027800 | 60.000 | 55 | 22 | 0 | 211 | 265 | 39 | 93 | 5.23e-13 | 69.3 |
MsG0180005067.01.T01 | MTR_1g080330 | 50.794 | 63 | 31 | 0 | 211 | 273 | 175 | 237 | 5.62e-13 | 69.3 |
MsG0180005067.01.T01 | MTR_2g027800 | 60.000 | 55 | 22 | 0 | 211 | 265 | 39 | 93 | 7.95e-13 | 68.9 |
MsG0180005067.01.T01 | MTR_1g080330 | 50.794 | 63 | 31 | 0 | 211 | 273 | 175 | 237 | 9.25e-13 | 69.3 |
MsG0180005067.01.T01 | MTR_4g064730 | 43.243 | 74 | 41 | 1 | 207 | 280 | 127 | 199 | 1.08e-12 | 68.6 |
MsG0180005067.01.T01 | MTR_6g444980 | 60.000 | 55 | 22 | 0 | 211 | 265 | 35 | 89 | 1.29e-12 | 68.9 |
MsG0180005067.01.T01 | MTR_6g032990 | 48.529 | 68 | 35 | 0 | 211 | 278 | 42 | 109 | 1.47e-12 | 68.9 |
MsG0180005067.01.T01 | MTR_6g444980 | 60.000 | 55 | 22 | 0 | 211 | 265 | 35 | 89 | 1.49e-12 | 68.6 |
MsG0180005067.01.T01 | MTR_4g081710 | 58.182 | 55 | 23 | 0 | 211 | 265 | 17 | 71 | 1.55e-12 | 68.6 |
MsG0180005067.01.T01 | MTR_3g102590 | 43.590 | 78 | 41 | 2 | 209 | 284 | 141 | 217 | 1.63e-12 | 67.0 |
MsG0180005067.01.T01 | MTR_7g089010 | 40.244 | 82 | 45 | 2 | 188 | 269 | 71 | 148 | 1.64e-12 | 67.8 |
MsG0180005067.01.T01 | MTR_2g086450 | 56.364 | 55 | 24 | 0 | 211 | 265 | 45 | 99 | 1.66e-12 | 68.6 |
MsG0180005067.01.T01 | MTR_1g053835 | 51.667 | 60 | 29 | 0 | 211 | 270 | 258 | 317 | 1.81e-12 | 68.6 |
MsG0180005067.01.T01 | MTR_1g053830 | 49.057 | 53 | 27 | 0 | 213 | 265 | 20 | 72 | 2.06e-12 | 63.2 |
MsG0180005067.01.T01 | MTR_4g078810 | 45.070 | 71 | 38 | 1 | 209 | 279 | 156 | 225 | 3.56e-12 | 67.8 |
MsG0180005067.01.T01 | MTR_4g021790 | 48.571 | 70 | 35 | 1 | 200 | 269 | 157 | 225 | 3.82e-12 | 66.6 |
MsG0180005067.01.T01 | MTR_1g090670 | 58.182 | 55 | 23 | 0 | 211 | 265 | 44 | 98 | 4.80e-12 | 66.6 |
MsG0180005067.01.T01 | MTR_4g131600 | 32.143 | 140 | 81 | 5 | 204 | 342 | 193 | 319 | 5.16e-12 | 67.8 |
MsG0180005067.01.T01 | MTR_2g090675 | 45.070 | 71 | 38 | 1 | 209 | 279 | 159 | 228 | 6.76e-12 | 67.0 |
MsG0180005067.01.T01 | MTR_8g079940 | 46.479 | 71 | 37 | 1 | 210 | 280 | 208 | 277 | 6.99e-12 | 67.0 |
MsG0180005067.01.T01 | MTR_5g014040 | 47.887 | 71 | 31 | 2 | 204 | 269 | 264 | 333 | 7.79e-12 | 67.0 |
MsG0180005067.01.T01 | MTR_5g014040 | 47.887 | 71 | 31 | 2 | 204 | 269 | 304 | 373 | 8.78e-12 | 67.0 |
MsG0180005067.01.T01 | MTR_2g023580 | 55.769 | 52 | 23 | 0 | 213 | 264 | 57 | 108 | 1.29e-11 | 64.3 |
MsG0180005067.01.T01 | MTR_5g027440 | 50.820 | 61 | 28 | 1 | 211 | 269 | 25 | 85 | 1.77e-11 | 64.7 |
MsG0180005067.01.T01 | MTR_3g086100 | 40.698 | 86 | 45 | 2 | 200 | 280 | 112 | 196 | 1.95e-11 | 65.9 |
MsG0180005067.01.T01 | MTR_7g093030 | 46.269 | 67 | 36 | 0 | 211 | 277 | 212 | 278 | 1.96e-11 | 64.7 |
MsG0180005067.01.T01 | MTR_7g115530 | 37.615 | 109 | 60 | 2 | 162 | 262 | 161 | 269 | 2.25e-11 | 64.3 |
MsG0180005067.01.T01 | MTR_0450s0040 | 43.243 | 74 | 41 | 1 | 210 | 283 | 168 | 240 | 2.54e-11 | 64.7 |
MsG0180005067.01.T01 | MTR_3g086100 | 40.698 | 86 | 45 | 2 | 200 | 280 | 183 | 267 | 3.32e-11 | 65.1 |
MsG0180005067.01.T01 | MTR_7g115530 | 31.852 | 135 | 83 | 3 | 162 | 288 | 161 | 294 | 3.64e-11 | 63.9 |
MsG0180005067.01.T01 | MTR_7g093030 | 46.269 | 67 | 36 | 0 | 211 | 277 | 212 | 278 | 4.70e-11 | 64.3 |
MsG0180005067.01.T01 | MTR_7g026400 | 49.153 | 59 | 29 | 1 | 210 | 268 | 156 | 213 | 5.76e-11 | 64.3 |
MsG0180005067.01.T01 | MTR_4g021760 | 40.506 | 79 | 46 | 1 | 208 | 286 | 166 | 243 | 9.09e-11 | 62.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180005067.01.T01 | AT1G68670 | 47.929 | 338 | 126 | 12 | 10 | 326 | 16 | 324 | 1.59e-79 | 248 |
MsG0180005067.01.T01 | AT1G25550 | 46.386 | 332 | 125 | 11 | 10 | 328 | 20 | 311 | 1.32e-77 | 243 |
MsG0180005067.01.T01 | AT3G25790 | 43.869 | 367 | 166 | 8 | 10 | 372 | 20 | 350 | 9.30e-75 | 236 |
MsG0180005067.01.T01 | AT1G13300 | 48.311 | 296 | 99 | 9 | 11 | 299 | 20 | 268 | 9.58e-71 | 225 |
MsG0180005067.01.T01 | AT1G25550 | 49.231 | 260 | 104 | 8 | 10 | 261 | 20 | 259 | 1.25e-66 | 213 |
MsG0180005067.01.T01 | AT3G25790 | 46.457 | 254 | 109 | 4 | 9 | 261 | 19 | 246 | 1.81e-56 | 186 |
MsG0180005067.01.T01 | AT2G03500 | 35.802 | 324 | 126 | 9 | 8 | 294 | 36 | 314 | 2.12e-48 | 169 |
MsG0180005067.01.T01 | AT4G37180 | 33.935 | 277 | 109 | 8 | 11 | 269 | 48 | 268 | 3.17e-33 | 127 |
MsG0180005067.01.T01 | AT4G37180 | 33.574 | 277 | 117 | 8 | 11 | 269 | 48 | 275 | 1.35e-30 | 120 |
MsG0180005067.01.T01 | AT1G49560 | 32.542 | 295 | 132 | 9 | 10 | 293 | 30 | 268 | 4.24e-30 | 118 |
MsG0180005067.01.T01 | AT4G37180 | 33.086 | 269 | 106 | 8 | 11 | 261 | 48 | 260 | 1.26e-28 | 113 |
MsG0180005067.01.T01 | AT1G49560 | 31.939 | 263 | 118 | 8 | 10 | 261 | 30 | 242 | 4.11e-23 | 97.8 |
MsG0180005067.01.T01 | AT2G01060 | 57.812 | 64 | 27 | 0 | 211 | 274 | 15 | 78 | 1.99e-15 | 76.3 |
MsG0180005067.01.T01 | AT3G16857 | 35.252 | 139 | 79 | 3 | 199 | 336 | 155 | 283 | 7.23e-15 | 76.6 |
MsG0180005067.01.T01 | AT3G16857 | 34.752 | 141 | 81 | 3 | 199 | 338 | 225 | 355 | 7.79e-15 | 76.6 |
MsG0180005067.01.T01 | AT3G16857 | 34.752 | 141 | 81 | 3 | 199 | 338 | 225 | 355 | 8.38e-15 | 76.3 |
MsG0180005067.01.T01 | AT2G25180 | 32.515 | 163 | 93 | 5 | 209 | 356 | 193 | 353 | 2.16e-14 | 75.1 |
MsG0180005067.01.T01 | AT5G58080 | 50.000 | 66 | 32 | 1 | 204 | 269 | 187 | 251 | 3.86e-14 | 74.3 |
MsG0180005067.01.T01 | AT3G04030 | 53.846 | 65 | 30 | 0 | 211 | 275 | 45 | 109 | 9.20e-14 | 72.4 |
MsG0180005067.01.T01 | AT3G04030 | 53.846 | 65 | 30 | 0 | 211 | 275 | 45 | 109 | 1.06e-13 | 72.4 |
MsG0180005067.01.T01 | AT5G05090 | 45.570 | 79 | 41 | 2 | 192 | 269 | 61 | 138 | 1.79e-13 | 70.5 |
MsG0180005067.01.T01 | AT5G06800 | 53.226 | 62 | 29 | 0 | 211 | 272 | 192 | 253 | 2.74e-13 | 70.1 |
MsG0180005067.01.T01 | AT5G18240 | 58.182 | 55 | 23 | 0 | 211 | 265 | 45 | 99 | 3.45e-13 | 70.9 |
MsG0180005067.01.T01 | AT5G18240 | 58.182 | 55 | 23 | 0 | 211 | 265 | 45 | 99 | 3.45e-13 | 70.9 |
MsG0180005067.01.T01 | AT5G18240 | 58.182 | 55 | 23 | 0 | 211 | 265 | 45 | 99 | 3.98e-13 | 70.5 |
MsG0180005067.01.T01 | AT5G18240 | 58.182 | 55 | 23 | 0 | 211 | 265 | 45 | 99 | 3.98e-13 | 70.5 |
MsG0180005067.01.T01 | AT5G18240 | 58.182 | 55 | 23 | 0 | 211 | 265 | 45 | 99 | 3.98e-13 | 70.5 |
MsG0180005067.01.T01 | AT2G01760 | 44.156 | 77 | 42 | 1 | 210 | 286 | 134 | 209 | 4.97e-13 | 69.7 |
MsG0180005067.01.T01 | AT5G44190 | 43.750 | 80 | 44 | 1 | 200 | 279 | 136 | 214 | 6.16e-13 | 69.7 |
MsG0180005067.01.T01 | AT2G01760 | 44.156 | 77 | 42 | 1 | 210 | 286 | 227 | 302 | 6.51e-13 | 70.1 |
MsG0180005067.01.T01 | AT5G44190 | 43.750 | 80 | 44 | 1 | 200 | 279 | 136 | 214 | 6.79e-13 | 69.7 |
MsG0180005067.01.T01 | AT2G01760 | 44.156 | 77 | 42 | 1 | 210 | 286 | 199 | 274 | 7.72e-13 | 69.7 |
MsG0180005067.01.T01 | AT5G06800 | 53.226 | 62 | 29 | 0 | 211 | 272 | 192 | 253 | 9.48e-13 | 69.3 |
MsG0180005067.01.T01 | AT3G10760 | 44.444 | 81 | 43 | 2 | 190 | 269 | 83 | 162 | 9.52e-13 | 68.9 |
MsG0180005067.01.T01 | AT5G06800 | 53.226 | 62 | 29 | 0 | 211 | 272 | 192 | 253 | 1.02e-12 | 69.3 |
MsG0180005067.01.T01 | AT2G40970 | 45.070 | 71 | 38 | 1 | 199 | 269 | 93 | 162 | 1.05e-12 | 67.8 |
MsG0180005067.01.T01 | AT3G46640 | 33.113 | 151 | 92 | 4 | 134 | 276 | 59 | 208 | 1.44e-12 | 68.6 |
MsG0180005067.01.T01 | AT5G45580 | 44.595 | 74 | 41 | 0 | 211 | 284 | 7 | 80 | 1.46e-12 | 67.8 |
MsG0180005067.01.T01 | AT3G46640 | 46.269 | 67 | 35 | 1 | 210 | 276 | 143 | 208 | 1.49e-12 | 68.2 |
MsG0180005067.01.T01 | AT3G46640 | 46.269 | 67 | 35 | 1 | 210 | 276 | 143 | 208 | 1.49e-12 | 68.2 |
MsG0180005067.01.T01 | AT1G79430 | 60.000 | 55 | 22 | 0 | 211 | 265 | 34 | 88 | 1.52e-12 | 68.6 |
MsG0180005067.01.T01 | AT5G45580 | 44.595 | 74 | 41 | 0 | 211 | 284 | 23 | 96 | 1.54e-12 | 67.8 |
MsG0180005067.01.T01 | AT3G04450 | 51.667 | 60 | 29 | 0 | 211 | 270 | 238 | 297 | 1.61e-12 | 68.2 |
MsG0180005067.01.T01 | AT5G59570 | 38.318 | 107 | 64 | 2 | 163 | 269 | 94 | 198 | 2.15e-12 | 67.8 |
MsG0180005067.01.T01 | AT5G59570 | 38.318 | 107 | 64 | 2 | 163 | 269 | 94 | 198 | 2.15e-12 | 67.8 |
MsG0180005067.01.T01 | AT3G24120 | 58.182 | 55 | 23 | 0 | 211 | 265 | 41 | 95 | 2.26e-12 | 67.4 |
MsG0180005067.01.T01 | AT5G29000 | 49.206 | 63 | 32 | 0 | 211 | 273 | 231 | 293 | 2.33e-12 | 67.8 |
MsG0180005067.01.T01 | AT4G13640 | 58.182 | 55 | 23 | 0 | 211 | 265 | 37 | 91 | 2.39e-12 | 67.4 |
MsG0180005067.01.T01 | AT3G24120 | 58.182 | 55 | 23 | 0 | 211 | 265 | 41 | 95 | 2.52e-12 | 67.4 |
MsG0180005067.01.T01 | AT4G13640 | 58.182 | 55 | 23 | 0 | 211 | 265 | 37 | 91 | 2.58e-12 | 67.4 |
MsG0180005067.01.T01 | AT3G13040 | 52.459 | 61 | 29 | 0 | 210 | 270 | 240 | 300 | 2.99e-12 | 68.2 |
MsG0180005067.01.T01 | AT3G13040 | 52.459 | 61 | 29 | 0 | 210 | 270 | 240 | 300 | 2.99e-12 | 68.2 |
MsG0180005067.01.T01 | AT3G13040 | 52.459 | 61 | 29 | 0 | 210 | 270 | 240 | 300 | 2.99e-12 | 68.2 |
MsG0180005067.01.T01 | AT3G04450 | 51.667 | 60 | 29 | 0 | 211 | 270 | 238 | 297 | 3.24e-12 | 68.2 |
MsG0180005067.01.T01 | AT3G04450 | 51.667 | 60 | 29 | 0 | 211 | 270 | 198 | 257 | 3.57e-12 | 67.8 |
MsG0180005067.01.T01 | AT3G04450 | 51.667 | 60 | 29 | 0 | 211 | 270 | 198 | 257 | 3.57e-12 | 67.8 |
MsG0180005067.01.T01 | AT2G20570 | 47.945 | 73 | 37 | 1 | 207 | 279 | 149 | 220 | 4.18e-12 | 67.8 |
MsG0180005067.01.T01 | AT5G29000 | 49.206 | 63 | 32 | 0 | 211 | 273 | 231 | 293 | 5.67e-12 | 67.0 |
MsG0180005067.01.T01 | AT3G04030 | 52.308 | 65 | 30 | 1 | 211 | 275 | 45 | 108 | 5.85e-12 | 67.0 |
MsG0180005067.01.T01 | AT5G29000 | 49.206 | 63 | 32 | 0 | 211 | 273 | 188 | 250 | 6.05e-12 | 67.0 |
MsG0180005067.01.T01 | AT5G29000 | 49.206 | 63 | 32 | 0 | 211 | 273 | 188 | 250 | 6.05e-12 | 67.0 |
MsG0180005067.01.T01 | AT4G28610 | 51.667 | 60 | 29 | 0 | 211 | 270 | 225 | 284 | 6.29e-12 | 67.0 |
MsG0180005067.01.T01 | AT3G12730 | 56.364 | 55 | 24 | 0 | 211 | 265 | 23 | 77 | 7.11e-12 | 65.1 |
MsG0180005067.01.T01 | AT2G42660 | 52.632 | 57 | 27 | 0 | 216 | 272 | 55 | 111 | 1.06e-11 | 65.1 |
MsG0180005067.01.T01 | AT2G38300 | 51.923 | 52 | 25 | 0 | 213 | 264 | 56 | 107 | 1.85e-11 | 65.1 |
MsG0180005067.01.T01 | AT4G31920 | 42.105 | 76 | 43 | 1 | 204 | 279 | 176 | 250 | 2.12e-11 | 65.9 |
MsG0180005067.01.T01 | AT2G06020 | 50.909 | 55 | 27 | 0 | 211 | 265 | 86 | 140 | 2.43e-11 | 64.3 |
MsG0180005067.01.T01 | AT1G49190 | 36.486 | 74 | 44 | 1 | 196 | 266 | 200 | 273 | 5.59e-11 | 63.9 |
MsG0180005067.01.T01 | AT4G04605 | 51.923 | 52 | 25 | 0 | 213 | 264 | 16 | 67 | 8.27e-11 | 62.0 |
Find 93 sgRNAs with CRISPR-Local
Find 127 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGTTAACTCTATCTTCTTTA+TGG | 0.063110 | 1:+86473351 | None:intergenic |
CACAATGCAGCGTTTCAAAA+TGG | 0.179894 | 1:-86474089 | MsG0180005067.01.T01:exon |
ACAAAAGTGGTTGCACCTTC+TGG | 0.247597 | 1:-86472531 | MsG0180005067.01.T01:CDS |
CATATCTACAAACCTGTAAA+TGG | 0.279375 | 1:+86472936 | None:intergenic |
TGAAGTCAAAAGCCATTTAC+AGG | 0.284068 | 1:-86472948 | MsG0180005067.01.T01:intron |
AACGAAAGAGGAAGTTCTTT+AGG | 0.297245 | 1:+86474010 | None:intergenic |
ATATCGATGAAGAAAGAATA+TGG | 0.311789 | 1:+86474201 | None:intergenic |
GATGTCTCCAACATTGTTAC+TGG | 0.321828 | 1:+86473247 | None:intergenic |
CGAAGAACTCGGGAAAATAT+CGG | 0.326062 | 1:+86474326 | None:intergenic |
ATTACCTCTCTGATTTGCTT+TGG | 0.356836 | 1:+86472995 | None:intergenic |
GTCGTTCTTGTTCTAATGCT+TGG | 0.361767 | 1:+86474050 | None:intergenic |
CTTTCGTTATTTGTTGAACT+TGG | 0.382926 | 1:+86472657 | None:intergenic |
AATAACATTATACAACAAAA+AGG | 0.387476 | 1:+86472248 | None:intergenic |
GGCTTAGATCTGTTCAGTTA+TGG | 0.389861 | 1:-86473609 | MsG0180005067.01.T01:CDS |
CCCCACCATACTCTTGTTGT+TGG | 0.395076 | 1:+86472583 | None:intergenic |
GGAATAAACTCTTCTAAAAC+AGG | 0.409660 | 1:+86473751 | None:intergenic |
GAAGAACTCGGGAAAATATC+GGG | 0.411702 | 1:+86474327 | None:intergenic |
TTTGTCCAACAACAAGAGTA+TGG | 0.414336 | 1:-86472588 | MsG0180005067.01.T01:CDS |
ATTATTACCTCTTCAGATGA+AGG | 0.417768 | 1:+86473577 | None:intergenic |
ACAATGCAGCGTTTCAAAAT+GGG | 0.423030 | 1:-86474088 | MsG0180005067.01.T01:CDS |
GTAGCTTCATCAACAACAAC+AGG | 0.429695 | 1:-86472561 | MsG0180005067.01.T01:CDS |
TGCTCAAACCTCTTGAACTC+TGG | 0.432408 | 1:+86472459 | None:intergenic |
GCAGCGACGGTGCTGGTCGC+AGG | 0.434166 | 1:-86473195 | MsG0180005067.01.T01:CDS |
GTTTATTCCAATTAAGAAAA+GGG | 0.437351 | 1:-86473737 | MsG0180005067.01.T01:CDS |
GTTGCACAAGCGATTCTTGA+AGG | 0.440339 | 1:-86473171 | MsG0180005067.01.T01:CDS |
GAATGAAGGAGAAACAAAGA+AGG | 0.444900 | 1:+86474286 | None:intergenic |
AGTTTATTCCAATTAAGAAA+AGG | 0.446516 | 1:-86473738 | MsG0180005067.01.T01:CDS |
ACTCTATCTTCTTTATGGAA+TGG | 0.449526 | 1:+86473356 | None:intergenic |
GCTTGTCGACAACAATTGTC+TGG | 0.459321 | 1:-86473841 | MsG0180005067.01.T01:CDS |
CATCAAAAGAGACGAGAAAG+AGG | 0.461312 | 1:-86473228 | MsG0180005067.01.T01:CDS |
TTGAAGGCGCTTCAGCAACT+TGG | 0.469776 | 1:-86473155 | MsG0180005067.01.T01:CDS |
GAGACAGTTCGCGAAGAACT+CGG | 0.475399 | 1:+86474315 | None:intergenic |
TATCGATGAAGAAAGAATAT+GGG | 0.478424 | 1:+86474202 | None:intergenic |
AGAGAGGTAATGAATGTTGA+TGG | 0.478733 | 1:-86472983 | MsG0180005067.01.T01:CDS |
GCATTCAATCTCAGATGAAA+GGG | 0.480171 | 1:-86472439 | MsG0180005067.01.T01:CDS |
AGGTGCTGCTGTTTGTGAAT+TGG | 0.480961 | 1:+86472632 | None:intergenic |
CTCTCTGATTTGCTTTGGTG+TGG | 0.488332 | 1:+86473000 | None:intergenic |
GTGTTGGAATTGAAGAGAAA+TGG | 0.488831 | 1:-86473401 | MsG0180005067.01.T01:CDS |
ACAACTGAGTATAATTTGAA+TGG | 0.489356 | 1:-86473814 | MsG0180005067.01.T01:CDS |
TCAATAACCAGGGGAAGTAT+TGG | 0.491273 | 1:+86472350 | None:intergenic |
TTGGTCTTCTAGTATGCAAC+CGG | 0.498211 | 1:+86472676 | None:intergenic |
ACAAGTGAATTGTTAAGTAA+AGG | 0.498649 | 1:-86473323 | MsG0180005067.01.T01:CDS |
AGACAGTTCGCGAAGAACTC+GGG | 0.499976 | 1:+86474316 | None:intergenic |
ATGTTGCCTACAAGGACAAA+AGG | 0.503411 | 1:+86472612 | None:intergenic |
AAGGCGCTTCAGCAACTTGG+TGG | 0.504237 | 1:-86473152 | MsG0180005067.01.T01:CDS |
TTAATAAACCAGAGTTCAAG+AGG | 0.515038 | 1:-86472467 | MsG0180005067.01.T01:CDS |
ACTTGAGGATGTGTGGCTAC+TGG | 0.518302 | 1:+86472498 | None:intergenic |
AGCATTCAATCTCAGATGAA+AGG | 0.522044 | 1:-86472440 | MsG0180005067.01.T01:CDS |
AAGAGAAATGGAAGTGGTGG+TGG | 0.523432 | 1:-86473389 | MsG0180005067.01.T01:CDS |
TGTGTAGAGGATGAAGATGT+AGG | 0.529070 | 1:+86472381 | None:intergenic |
AATGAAGGAGAAACAAAGAA+GGG | 0.534302 | 1:+86474287 | None:intergenic |
TCCAACAACAAGAGTATGGT+GGG | 0.538170 | 1:-86472584 | MsG0180005067.01.T01:CDS |
AGAGAAAGCAGCGACGGTGC+TGG | 0.540249 | 1:-86473202 | MsG0180005067.01.T01:CDS |
AGAACTCACGGCAGCTACAC+CGG | 0.545612 | 1:+86473286 | None:intergenic |
TTATTAATTGTAGCAACTTG+AGG | 0.553389 | 1:+86472483 | None:intergenic |
TTTGAAACGCTGCATTGTGA+AGG | 0.557389 | 1:+86474093 | None:intergenic |
GTAACGAGTTCTAACGAAAG+AGG | 0.565892 | 1:+86473998 | None:intergenic |
GGCAGCTACACCGGTCGAAG+AGG | 0.574491 | 1:+86473295 | None:intergenic |
AAAATTAAAACTCAATAACC+AGG | 0.575545 | 1:+86472339 | None:intergenic |
ATAATCGATTCTGAAGAGAA+TGG | 0.575641 | 1:+86474142 | None:intergenic |
ATAATAAGAAGAAATCTGAC+TGG | 0.576819 | 1:-86473630 | MsG0180005067.01.T01:CDS |
AGGAAAAGAGAAAGCAGCGA+CGG | 0.577313 | 1:-86473208 | MsG0180005067.01.T01:CDS |
ACTACTACCAATACTTCCCC+TGG | 0.577357 | 1:-86472357 | MsG0180005067.01.T01:CDS |
TAAGAAAACAGTGCCTGTGT+TGG | 0.581215 | 1:-86473417 | MsG0180005067.01.T01:CDS |
TTCAGATCCTTCATCTGAAG+AGG | 0.584122 | 1:-86473584 | MsG0180005067.01.T01:intron |
AAAATGGTTTATGTAAGAAG+AGG | 0.585452 | 1:+86474118 | None:intergenic |
AAAGGACAACCCTCTTCGAC+CGG | 0.587220 | 1:-86473305 | MsG0180005067.01.T01:CDS |
AAATTAAAACTCAATAACCA+GGG | 0.590216 | 1:+86472340 | None:intergenic |
GCAGCTACACCGGTCGAAGA+GGG | 0.597437 | 1:+86473296 | None:intergenic |
AATCACATACAACATAAATG+AGG | 0.600136 | 1:+86472224 | None:intergenic |
TTTCTCTTCAATTCCAACAC+AGG | 0.600323 | 1:+86473404 | None:intergenic |
CTTGTTCTAAAGAGATAACA+TGG | 0.602698 | 1:+86472124 | None:intergenic |
AACAGGGGAAATGACAAAAG+TGG | 0.604173 | 1:-86472544 | MsG0180005067.01.T01:CDS |
ATTGGTAGTAGTATGTGTAG+AGG | 0.610237 | 1:+86472368 | None:intergenic |
AATGTCACCAGTAACAATGT+TGG | 0.610482 | 1:-86473254 | MsG0180005067.01.T01:CDS |
GTCCAACAACAAGAGTATGG+TGG | 0.618792 | 1:-86472585 | MsG0180005067.01.T01:CDS |
GAACAGACAACATCAACAGA+TGG | 0.623810 | 1:-86473775 | MsG0180005067.01.T01:CDS |
ATTAGCCGCATTAGAACTCA+CGG | 0.629576 | 1:+86473274 | None:intergenic |
TCGTTAGAACTCGTTACACA+AGG | 0.638093 | 1:-86473992 | MsG0180005067.01.T01:intron |
GAAAGGGGTAATAACAGTGA+AGG | 0.640994 | 1:-86472423 | MsG0180005067.01.T01:CDS |
TTGAAGAGAAATGGAAGTGG+TGG | 0.651388 | 1:-86473392 | MsG0180005067.01.T01:CDS |
AAGAACTCGGGAAAATATCG+GGG | 0.653860 | 1:+86474328 | None:intergenic |
CATTCAATCTCAGATGAAAG+GGG | 0.655574 | 1:-86472438 | MsG0180005067.01.T01:CDS |
ACTGGTGCATAGATTCCAGA+AGG | 0.656305 | 1:+86472516 | None:intergenic |
AGCTGCCGTGAGTTCTAATG+CGG | 0.671481 | 1:-86473279 | MsG0180005067.01.T01:CDS |
TGTAGCAACTTGAGGATGTG+TGG | 0.683531 | 1:+86472491 | None:intergenic |
GAATTGAAGAGAAATGGAAG+TGG | 0.689165 | 1:-86473395 | MsG0180005067.01.T01:CDS |
TAGCTTCATCAACAACAACA+GGG | 0.693117 | 1:-86472560 | MsG0180005067.01.T01:CDS |
AATTAAAACTCAATAACCAG+GGG | 0.700665 | 1:+86472341 | None:intergenic |
CCAACAACAAGAGTATGGTG+GGG | 0.702776 | 1:-86472583 | MsG0180005067.01.T01:CDS |
AGCTTCATCAACAACAACAG+GGG | 0.709783 | 1:-86472559 | MsG0180005067.01.T01:CDS |
CACACCAAAGCAAATCAGAG+AGG | 0.720773 | 1:-86472999 | MsG0180005067.01.T01:CDS |
AGAACTCGGGAAAATATCGG+GGG | 0.731731 | 1:+86474329 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAAAAAATTGATTTTAATTG+AGG | + | Chr1:86473729-86473748 | None:intergenic | 10.0% |
!! | AATAACATTATACAACAAAA+AGG | + | Chr1:86474202-86474221 | None:intergenic | 15.0% |
!!! | AAAATAATTTTGGATGTTTT+TGG | - | Chr1:86472564-86472583 | MsG0180005067.01.T01:CDS | 15.0% |
!!! | AAGTTTGTATTTTTTTTATC+TGG | - | Chr1:86472524-86472543 | MsG0180005067.01.T01:CDS | 15.0% |
!!! | AGTTTGTATTTTTTTTATCT+GGG | - | Chr1:86472525-86472544 | MsG0180005067.01.T01:CDS | 15.0% |
!!! | TTACTTTTTGTTAAACTAAA+GGG | - | Chr1:86472941-86472960 | MsG0180005067.01.T01:intron | 15.0% |
!!! | TTTACTTTTTGTTAAACTAA+AGG | - | Chr1:86472940-86472959 | MsG0180005067.01.T01:intron | 15.0% |
!! | AAAAGAAAGAAAAAGAATGA+AGG | + | Chr1:86472178-86472197 | None:intergenic | 20.0% |
!! | AAAATTAAAACTCAATAACC+AGG | + | Chr1:86474111-86474130 | None:intergenic | 20.0% |
!! | AAATTAAAACTCAATAACCA+GGG | + | Chr1:86474110-86474129 | None:intergenic | 20.0% |
!! | AGTTTATTCCAATTAAGAAA+AGG | - | Chr1:86472709-86472728 | MsG0180005067.01.T01:intron | 20.0% |
!! | GTTTATTCCAATTAAGAAAA+GGG | - | Chr1:86472710-86472729 | MsG0180005067.01.T01:intron | 20.0% |
!!! | GTTTTTGTGAAAAATTGTTT+AGG | - | Chr1:86473000-86473019 | MsG0180005067.01.T01:CDS | 20.0% |
!!! | TTTTTCACAAAAACAAAACA+AGG | + | Chr1:86472994-86473013 | None:intergenic | 20.0% |
! | AAAATGGTTTATGTAAGAAG+AGG | + | Chr1:86472332-86472351 | None:intergenic | 25.0% |
! | AAAATTGACAACAAAAGAGT+TGG | + | Chr1:86473546-86473565 | None:intergenic | 25.0% |
! | AAATTGACAACAAAAGAGTT+GGG | + | Chr1:86473545-86473564 | None:intergenic | 25.0% |
! | AATCACATACAACATAAATG+AGG | + | Chr1:86474226-86474245 | None:intergenic | 25.0% |
! | AATTAAAACTCAATAACCAG+GGG | + | Chr1:86474109-86474128 | None:intergenic | 25.0% |
! | ACAACTGAGTATAATTTGAA+TGG | - | Chr1:86472633-86472652 | MsG0180005067.01.T01:CDS | 25.0% |
! | ACAAGTGAATTGTTAAGTAA+AGG | - | Chr1:86473124-86473143 | MsG0180005067.01.T01:intron | 25.0% |
! | ATAATAAGAAGAAATCTGAC+TGG | - | Chr1:86472817-86472836 | MsG0180005067.01.T01:intron | 25.0% |
! | ATATCGATGAAGAAAGAATA+TGG | + | Chr1:86472249-86472268 | None:intergenic | 25.0% |
! | TATCGATGAAGAAAGAATAT+GGG | + | Chr1:86472248-86472267 | None:intergenic | 25.0% |
! | TCTGAAGAAGAATCAAAAAT+TGG | + | Chr1:86472224-86472243 | None:intergenic | 25.0% |
! | TGTTAACTCTATCTTCTTTA+TGG | + | Chr1:86473099-86473118 | None:intergenic | 25.0% |
! | TTATTAATTGTAGCAACTTG+AGG | + | Chr1:86473967-86473986 | None:intergenic | 25.0% |
AATGAAGGAGAAACAAAGAA+GGG | + | Chr1:86472163-86472182 | None:intergenic | 30.0% | |
ACTCTATCTTCTTTATGGAA+TGG | + | Chr1:86473094-86473113 | None:intergenic | 30.0% | |
ATTATTACCTCTTCAGATGA+AGG | + | Chr1:86472873-86472892 | None:intergenic | 30.0% | |
CATATCTACAAACCTGTAAA+TGG | + | Chr1:86473514-86473533 | None:intergenic | 30.0% | |
GAAATCCTATGCAATTGAAA+GGG | + | Chr1:86473650-86473669 | None:intergenic | 30.0% | |
TGAAATCCTATGCAATTGAA+AGG | + | Chr1:86473651-86473670 | None:intergenic | 30.0% | |
TGGTAGTATCCATCTAAAAA+AGG | + | Chr1:86474306-86474325 | None:intergenic | 30.0% | |
TTAATAAACCAGAGTTCAAG+AGG | - | Chr1:86473980-86473999 | MsG0180005067.01.T01:intron | 30.0% | |
! | ATAATCGATTCTGAAGAGAA+TGG | + | Chr1:86472308-86472327 | None:intergenic | 30.0% |
! | CTTTCGTTATTTGTTGAACT+TGG | + | Chr1:86473793-86473812 | None:intergenic | 30.0% |
!! | CTTGTTCTAAAGAGATAACA+TGG | + | Chr1:86474326-86474345 | None:intergenic | 30.0% |
!! | GGAATAAACTCTTCTAAAAC+AGG | + | Chr1:86472699-86472718 | None:intergenic | 30.0% |
!!! | GTTTTTTGCTTCTGTTCTAT+AGG | - | Chr1:86473422-86473441 | MsG0180005067.01.T01:CDS | 30.0% |
!!! | TAAGTCACACCTTTTTTAGA+TGG | - | Chr1:86474294-86474313 | MsG0180005067.01.T01:five_prime_UTR | 30.0% |
!!! | TTTTGACTTCATCATTTGTG+AGG | + | Chr1:86473490-86473509 | None:intergenic | 30.0% |
AACGAAAGAGGAAGTTCTTT+AGG | + | Chr1:86472440-86472459 | None:intergenic | 35.0% | |
AATGTCACCAGTAACAATGT+TGG | - | Chr1:86473193-86473212 | MsG0180005067.01.T01:CDS | 35.0% | |
ACAATGCAGCGTTTCAAAAT+GGG | - | Chr1:86472359-86472378 | MsG0180005067.01.T01:CDS | 35.0% | |
AGAGAGGTAATGAATGTTGA+TGG | - | Chr1:86473464-86473483 | MsG0180005067.01.T01:intron | 35.0% | |
AGCATTCAATCTCAGATGAA+AGG | - | Chr1:86474007-86474026 | MsG0180005067.01.T01:CDS | 35.0% | |
CATTCAATCTCAGATGAAAG+GGG | - | Chr1:86474009-86474028 | MsG0180005067.01.T01:CDS | 35.0% | |
GAATGAAGGAGAAACAAAGA+AGG | + | Chr1:86472164-86472183 | None:intergenic | 35.0% | |
GAATTGAAGAGAAATGGAAG+TGG | - | Chr1:86473052-86473071 | MsG0180005067.01.T01:intron | 35.0% | |
GCATTCAATCTCAGATGAAA+GGG | - | Chr1:86474008-86474027 | MsG0180005067.01.T01:CDS | 35.0% | |
GTGTTGGAATTGAAGAGAAA+TGG | - | Chr1:86473046-86473065 | MsG0180005067.01.T01:intron | 35.0% | |
TAGCTTCATCAACAACAACA+GGG | - | Chr1:86473887-86473906 | MsG0180005067.01.T01:intron | 35.0% | |
TGAAGTCAAAAGCCATTTAC+AGG | - | Chr1:86473499-86473518 | MsG0180005067.01.T01:intron | 35.0% | |
TTAGTCCCTTTCAATTGCAT+AGG | - | Chr1:86473642-86473661 | MsG0180005067.01.T01:CDS | 35.0% | |
TTTCTCTTCAATTCCAACAC+AGG | + | Chr1:86473046-86473065 | None:intergenic | 35.0% | |
TTTGTCCAACAACAAGAGTA+TGG | - | Chr1:86473859-86473878 | MsG0180005067.01.T01:intron | 35.0% | |
! | ATTGGTAGTAGTATGTGTAG+AGG | + | Chr1:86474082-86474101 | None:intergenic | 35.0% |
! | GAAGAAGCCCTTTTCTTAAT+TGG | + | Chr1:86472720-86472739 | None:intergenic | 35.0% |
! | TCTGTTTTGCACAGAAATAC+CGG | - | Chr1:86473752-86473771 | MsG0180005067.01.T01:CDS | 35.0% |
!! | ATTACCTCTCTGATTTGCTT+TGG | + | Chr1:86473455-86473474 | None:intergenic | 35.0% |
AACAGGGGAAATGACAAAAG+TGG | - | Chr1:86473903-86473922 | MsG0180005067.01.T01:intron | 40.0% | |
AAGAACTCGGGAAAATATCG+GGG | + | Chr1:86472122-86472141 | None:intergenic | 40.0% | |
AGCTTCATCAACAACAACAG+GGG | - | Chr1:86473888-86473907 | MsG0180005067.01.T01:intron | 40.0% | |
ATGTTGCCTACAAGGACAAA+AGG | + | Chr1:86473838-86473857 | None:intergenic | 40.0% | |
ATTAGCCGCATTAGAACTCA+CGG | + | Chr1:86473176-86473195 | None:intergenic | 40.0% | |
CACAATGCAGCGTTTCAAAA+TGG | - | Chr1:86472358-86472377 | MsG0180005067.01.T01:CDS | 40.0% | |
CATCAAAAGAGACGAGAAAG+AGG | - | Chr1:86473219-86473238 | MsG0180005067.01.T01:CDS | 40.0% | |
CGAAGAACTCGGGAAAATAT+CGG | + | Chr1:86472124-86472143 | None:intergenic | 40.0% | |
CTGCATTGTGAAGGCAAAAA+TGG | + | Chr1:86472348-86472367 | None:intergenic | 40.0% | |
GAAAGGGGTAATAACAGTGA+AGG | - | Chr1:86474024-86474043 | MsG0180005067.01.T01:CDS | 40.0% | |
GAACAGACAACATCAACAGA+TGG | - | Chr1:86472672-86472691 | MsG0180005067.01.T01:CDS | 40.0% | |
GAAGAACTCGGGAAAATATC+GGG | + | Chr1:86472123-86472142 | None:intergenic | 40.0% | |
GATGTCTCCAACATTGTTAC+TGG | + | Chr1:86473203-86473222 | None:intergenic | 40.0% | |
GGACAAAAATGTTGCCTACA+AGG | + | Chr1:86473846-86473865 | None:intergenic | 40.0% | |
GGCTTAGATCTGTTCAGTTA+TGG | - | Chr1:86472838-86472857 | MsG0180005067.01.T01:intron | 40.0% | |
GTAGCTTCATCAACAACAAC+AGG | - | Chr1:86473886-86473905 | MsG0180005067.01.T01:intron | 40.0% | |
GTCGTTCTTGTTCTAATGCT+TGG | + | Chr1:86472400-86472419 | None:intergenic | 40.0% | |
TAAGAAAACAGTGCCTGTGT+TGG | - | Chr1:86473030-86473049 | MsG0180005067.01.T01:intron | 40.0% | |
TCGTTAGAACTCGTTACACA+AGG | - | Chr1:86472455-86472474 | MsG0180005067.01.T01:CDS | 40.0% | |
TGTGTAGAGGATGAAGATGT+AGG | + | Chr1:86474069-86474088 | None:intergenic | 40.0% | |
TTCAGATCCTTCATCTGAAG+AGG | - | Chr1:86472863-86472882 | MsG0180005067.01.T01:intron | 40.0% | |
TTGAAGAGAAATGGAAGTGG+TGG | - | Chr1:86473055-86473074 | MsG0180005067.01.T01:intron | 40.0% | |
! | GTAACGAGTTCTAACGAAAG+AGG | + | Chr1:86472452-86472471 | None:intergenic | 40.0% |
! | TCAATAACCAGGGGAAGTAT+TGG | + | Chr1:86474100-86474119 | None:intergenic | 40.0% |
! | TCCAACAACAAGAGTATGGT+GGG | - | Chr1:86473863-86473882 | MsG0180005067.01.T01:intron | 40.0% |
! | TTGGTCTTCTAGTATGCAAC+CGG | + | Chr1:86473774-86473793 | None:intergenic | 40.0% |
! | TTTGAAACGCTGCATTGTGA+AGG | + | Chr1:86472357-86472376 | None:intergenic | 40.0% |
AAGAGAAATGGAAGTGGTGG+TGG | - | Chr1:86473058-86473077 | MsG0180005067.01.T01:intron | 45.0% | |
ACAAAAGTGGTTGCACCTTC+TGG | - | Chr1:86473916-86473935 | MsG0180005067.01.T01:intron | 45.0% | |
ACTACTACCAATACTTCCCC+TGG | - | Chr1:86474090-86474109 | MsG0180005067.01.T01:exon | 45.0% | |
ACTGGTGCATAGATTCCAGA+AGG | + | Chr1:86473934-86473953 | None:intergenic | 45.0% | |
AGAACTCGGGAAAATATCGG+GGG | + | Chr1:86472121-86472140 | None:intergenic | 45.0% | |
AGGAAAAGAGAAAGCAGCGA+CGG | - | Chr1:86473239-86473258 | MsG0180005067.01.T01:CDS | 45.0% | |
CACACCAAAGCAAATCAGAG+AGG | - | Chr1:86473448-86473467 | MsG0180005067.01.T01:intron | 45.0% | |
GCTTGTCGACAACAATTGTC+TGG | - | Chr1:86472606-86472625 | MsG0180005067.01.T01:CDS | 45.0% | |
GTTGCACAAGCGATTCTTGA+AGG | - | Chr1:86473276-86473295 | MsG0180005067.01.T01:CDS | 45.0% | |
TGCTCAAACCTCTTGAACTC+TGG | + | Chr1:86473991-86474010 | None:intergenic | 45.0% | |
TGTAGCAACTTGAGGATGTG+TGG | + | Chr1:86473959-86473978 | None:intergenic | 45.0% | |
! | CCAACAACAAGAGTATGGTG+GGG | - | Chr1:86473864-86473883 | MsG0180005067.01.T01:intron | 45.0% |
! | CTGAAGAGAATGGCGTTTTG+TGG | + | Chr1:86472298-86472317 | None:intergenic | 45.0% |
! | GTCCAACAACAAGAGTATGG+TGG | - | Chr1:86473862-86473881 | MsG0180005067.01.T01:intron | 45.0% |
!! | AGGTGCTGCTGTTTGTGAAT+TGG | + | Chr1:86473818-86473837 | None:intergenic | 45.0% |
!! | CTCTCTGATTTGCTTTGGTG+TGG | + | Chr1:86473450-86473469 | None:intergenic | 45.0% |
!! | ATATATAAAAAAAAACAAAA+AGG | + | Chr1:86472492-86472511 | None:intergenic | 5.0% |
!! | TATATAAAAAAAAACAAAAA+GGG | + | Chr1:86472491-86472510 | None:intergenic | 5.0% |
!!! | TTATTTTTGAAAAATAATTT+TGG | - | Chr1:86472554-86472573 | MsG0180005067.01.T01:CDS | 5.0% |
AAAGGACAACCCTCTTCGAC+CGG | - | Chr1:86473142-86473161 | MsG0180005067.01.T01:intron | 50.0% | |
ACTTGAGGATGTGTGGCTAC+TGG | + | Chr1:86473952-86473971 | None:intergenic | 50.0% | |
AGACAGTTCGCGAAGAACTC+GGG | + | Chr1:86472134-86472153 | None:intergenic | 50.0% | |
AGCAAGAGAGAGAGAGAGAG+TGG | + | Chr1:86472274-86472293 | None:intergenic | 50.0% | |
CAAGAGAGAGAGAGAGAGTG+GGG | + | Chr1:86472272-86472291 | None:intergenic | 50.0% | |
GAGACAGTTCGCGAAGAACT+CGG | + | Chr1:86472135-86472154 | None:intergenic | 50.0% | |
GCAAGAGAGAGAGAGAGAGT+GGG | + | Chr1:86472273-86472292 | None:intergenic | 50.0% | |
! | AGCTGCCGTGAGTTCTAATG+CGG | - | Chr1:86473168-86473187 | MsG0180005067.01.T01:CDS | 50.0% |
! | CCCCACCATACTCTTGTTGT+TGG | + | Chr1:86473867-86473886 | None:intergenic | 50.0% |
! | GCAGCACCTTTTGTCCTTGT+AGG | - | Chr1:86473829-86473848 | MsG0180005067.01.T01:CDS | 50.0% |
!! | TTGAAGGCGCTTCAGCAACT+TGG | - | Chr1:86473292-86473311 | MsG0180005067.01.T01:CDS | 50.0% |
ACTCGGGAAAATATCGGGGG+CGG | + | Chr1:86472118-86472137 | None:intergenic | 55.0% | |
AGAACTCACGGCAGCTACAC+CGG | + | Chr1:86473164-86473183 | None:intergenic | 55.0% | |
! | AAGGCGCTTCAGCAACTTGG+TGG | - | Chr1:86473295-86473314 | MsG0180005067.01.T01:CDS | 55.0% |
AGAGAAAGCAGCGACGGTGC+TGG | - | Chr1:86473245-86473264 | MsG0180005067.01.T01:CDS | 60.0% | |
CTCGGGAAAATATCGGGGGC+GGG | + | Chr1:86472117-86472136 | None:intergenic | 60.0% | |
GCAGCTACACCGGTCGAAGA+GGG | + | Chr1:86473154-86473173 | None:intergenic | 60.0% | |
TCGGGAAAATATCGGGGGCG+GGG | + | Chr1:86472116-86472135 | None:intergenic | 60.0% | |
GGCAGCTACACCGGTCGAAG+AGG | + | Chr1:86473155-86473174 | None:intergenic | 65.0% | |
!! | GCAGCGACGGTGCTGGTCGC+AGG | - | Chr1:86473252-86473271 | MsG0180005067.01.T01:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr1 | gene | 86472103 | 86474366 | 86472103 | ID=MsG0180005067.01;Name=MsG0180005067.01 |
Chr1 | mRNA | 86472103 | 86474366 | 86472103 | ID=MsG0180005067.01.T01;Parent=MsG0180005067.01;Name=MsG0180005067.01.T01;_AED=0.16;_eAED=0.16;_QI=259|1|1|1|1|1|5|247|378 |
Chr1 | exon | 86472103 | 86472703 | 86472103 | ID=MsG0180005067.01.T01:exon:10029;Parent=MsG0180005067.01.T01 |
Chr1 | exon | 86472949 | 86473025 | 86472949 | ID=MsG0180005067.01.T01:exon:10028;Parent=MsG0180005067.01.T01 |
Chr1 | exon | 86473144 | 86473447 | 86473144 | ID=MsG0180005067.01.T01:exon:10027;Parent=MsG0180005067.01.T01 |
Chr1 | exon | 86473585 | 86473871 | 86473585 | ID=MsG0180005067.01.T01:exon:10026;Parent=MsG0180005067.01.T01 |
Chr1 | exon | 86473993 | 86474366 | 86473993 | ID=MsG0180005067.01.T01:exon:10025;Parent=MsG0180005067.01.T01 |
Chr1 | five_prime_UTR | 86474108 | 86474366 | 86474108 | ID=MsG0180005067.01.T01:five_prime_utr;Parent=MsG0180005067.01.T01 |
Chr1 | CDS | 86473993 | 86474107 | 86473993 | ID=MsG0180005067.01.T01:cds;Parent=MsG0180005067.01.T01 |
Chr1 | CDS | 86473585 | 86473871 | 86473585 | ID=MsG0180005067.01.T01:cds;Parent=MsG0180005067.01.T01 |
Chr1 | CDS | 86473144 | 86473447 | 86473144 | ID=MsG0180005067.01.T01:cds;Parent=MsG0180005067.01.T01 |
Chr1 | CDS | 86472949 | 86473025 | 86472949 | ID=MsG0180005067.01.T01:cds;Parent=MsG0180005067.01.T01 |
Chr1 | CDS | 86472350 | 86472703 | 86472350 | ID=MsG0180005067.01.T01:cds;Parent=MsG0180005067.01.T01 |
Chr1 | three_prime_UTR | 86472103 | 86472349 | 86472103 | ID=MsG0180005067.01.T01:three_prime_utr;Parent=MsG0180005067.01.T01 |
Gene Sequence |
Protein sequence |