AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180005978.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005978.01.T01 MTR_1g111120 70.608 609 51 8 204 685 23 630 0.0 790
MsG0180005978.01.T01 MTR_6g045363 65.846 609 74 9 207 685 30 634 0.0 725
MsG0180005978.01.T01 MTR_1g111100 97.630 211 5 0 1 211 3 213 2.80e-149 432
MsG0180005978.01.T01 MTR_4g005930 46.321 598 190 13 215 685 30 623 3.22e-138 424
MsG0180005978.01.T01 MTR_2g029520 46.500 200 103 1 12 211 11 206 7.91e-56 189
MsG0180005978.01.T01 MTR_2g030530 38.000 200 118 1 12 211 64 257 6.84e-44 159
MsG0180005978.01.T01 MTR_4g083940 27.227 595 297 16 225 688 18 607 2.92e-43 167
MsG0180005978.01.T01 MTR_1g069620 25.680 331 199 6 234 518 60 389 2.74e-22 102
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005978.01.T01 AT5G49830 45.960 594 194 11 215 685 24 613 1.20e-139 427
MsG0180005978.01.T01 AT1G10385 43.636 605 214 13 204 685 19 619 3.43e-139 426
MsG0180005978.01.T01 AT5G49830 43.840 625 193 12 215 685 24 644 1.38e-133 412
MsG0180005978.01.T01 AT5G49830 45.184 571 187 10 238 685 108 675 7.27e-130 404
MsG0180005978.01.T01 AT4G39670 65.842 202 68 1 11 211 27 228 4.45e-91 283
MsG0180005978.01.T01 AT2G34690 44.554 202 106 2 11 211 9 205 6.62e-52 179
MsG0180005978.01.T01 AT1G10180 28.061 588 290 14 225 688 18 596 1.74e-49 186

Find 123 sgRNAs with CRISPR-Local

Find 530 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGCAGCTTGGTTAGATAAA+AGG 0.224927 1:-98398855 None:intergenic
CTCGTTCATGCTGCGAGATT+TGG 0.277623 1:-98397844 None:intergenic
ATCTCCGTTCCCCGAGTTGA+TGG 0.281148 1:-98399198 None:intergenic
TGCTTTCAAATTCGCTGAAA+TGG 0.298390 1:+98392791 MsG0180005978.01.T01:CDS
AGTCTCGAGCCGACAACTTA+TGG 0.301317 1:+98399321 MsG0180005978.01.T01:CDS
TTATCAATGTATTCTATAAC+TGG 0.304225 1:-98394705 None:intergenic
GGATCTTTCCACAAAGGTTC+AGG 0.305144 1:+98392674 MsG0180005978.01.T01:CDS
TTCTTCAGTTCACGCTGTTC+CGG 0.308671 1:-98400795 None:intergenic
CTCAAGATCTGAAATCTCTT+TGG 0.319417 1:-98398809 None:intergenic
CTTGATTCCCTGAACCTTTG+TGG 0.341847 1:-98392682 None:intergenic
TTCCATTGCCGAAGCCTTTG+AGG 0.350410 1:+98392653 MsG0180005978.01.T01:CDS
AGGATACGCAATCGCTAAAT+CGG 0.356164 1:-98392625 None:intergenic
GACACTTGAAATCTTACAAT+TGG 0.367328 1:+98400506 MsG0180005978.01.T01:CDS
TTTGTAAAGCTCAATGAAAC+AGG 0.368946 1:+98393920 MsG0180005978.01.T01:CDS
TGAATCCATGGTAGCTTTAG+AGG 0.378246 1:+98399044 MsG0180005978.01.T01:CDS
TAGTCACTGTCATCTCTTAG+AGG 0.378681 1:+98399581 MsG0180005978.01.T01:CDS
GAAGTGGCGTCAACAGCTTA+TGG 0.379855 1:+98393812 MsG0180005978.01.T01:CDS
CCTTTCTCGAAATATTTCAT+TGG 0.382644 1:+98394734 MsG0180005978.01.T01:CDS
ATTGGAGAAGGAAACCATTC+AGG 0.390426 1:-98400951 None:intergenic
CTTCTGCAGAAGCCTTCTTA+AGG 0.407214 1:-98398364 None:intergenic
AGGCGAGAATCCGTTTCTTA+AGG 0.409182 1:-98399503 None:intergenic
CAGGAGCTTTGTAAAGCTTA+CGG 0.416442 1:+98401546 MsG0180005978.01.T01:intron
AATAATTGAGCATTCAAAAG+TGG 0.419355 1:-98400901 None:intergenic
CTCGAAATATTTCATTGGAC+TGG 0.428539 1:+98394739 MsG0180005978.01.T01:CDS
TAATCTACGCAGAGTTCGCC+AGG 0.430093 1:+98393481 MsG0180005978.01.T01:CDS
GTCAGAACGGCTGTGTATGC+TGG 0.431196 1:+98393866 MsG0180005978.01.T01:CDS
GTTAGATAAAAGGTTTCTCA+TGG 0.445154 1:-98398845 None:intergenic
CGTGACACAGTGAAAACATC+TGG 0.453856 1:+98393446 MsG0180005978.01.T01:CDS
AAACTTTCACATAGCACAAA+AGG 0.453898 1:+98400732 MsG0180005978.01.T01:CDS
TTTGGATATGGAGGAGAAAG+GGG 0.461026 1:+98400923 MsG0180005978.01.T01:CDS
GCTCGAGACTTTGCATGTTA+CGG 0.461531 1:-98399308 None:intergenic
TTGGATGGCCTTGCACTAGA+AGG 0.464705 1:+98400525 MsG0180005978.01.T01:CDS
TTTATCTAACCAAGCTGCAT+TGG 0.464925 1:+98398858 MsG0180005978.01.T01:CDS
TTTGGAAGCAACGTAGGCAC+TGG 0.466119 1:-98397826 None:intergenic
ATTCTCAGTGACAGCTGACC+TGG 0.470380 1:-98400597 None:intergenic
ATCTGATACTGCTTGTGAAA+TGG 0.475631 1:-98399391 None:intergenic
CTAATTACTCTTCCTTCATA+CGG 0.482371 1:+98398408 MsG0180005978.01.T01:CDS
TTATCTTGTTGACCTTAAGA+AGG 0.482425 1:+98398352 MsG0180005978.01.T01:CDS
TTTCGCTTCTCCTTAAGAAA+CGG 0.483756 1:+98399493 MsG0180005978.01.T01:CDS
GATTGTTTCTGCTAGTTGAT+CGG 0.484105 1:-98399169 None:intergenic
TGTAAAGCTTACGGAGTGGC+AGG 0.484941 1:+98401555 MsG0180005978.01.T01:CDS
CCAATGAAATATTTCGAGAA+AGG 0.487284 1:-98394734 None:intergenic
CTCGCCTCGATAGCTGCATC+AGG 0.488135 1:+98399519 MsG0180005978.01.T01:CDS
CTTGAAATCTTACAATTGGA+TGG 0.490444 1:+98400510 MsG0180005978.01.T01:CDS
CTAATTCCTCCATAAGTTGT+CGG 0.492159 1:-98399330 None:intergenic
TCACTCTCAGTGATAAGCTC+CGG 0.494279 1:+98397778 MsG0180005978.01.T01:intron
CTAAGAGATGACAGTGACTA+AGG 0.496173 1:-98399578 None:intergenic
CAAAGAGATTTCAGATCTTG+AGG 0.497575 1:+98398810 MsG0180005978.01.T01:CDS
ATACTTCTGAGCTAGTAACT+TGG 0.498432 1:+98399448 MsG0180005978.01.T01:CDS
GGAAAGATCCTCAAAGGCTT+CGG 0.500738 1:-98392661 None:intergenic
GATTGGTATGCTCAGCTACA+TGG 0.504762 1:+98393362 MsG0180005978.01.T01:intron
TTTGTGCACCGTATCACTCA+TGG 0.508447 1:+98393840 MsG0180005978.01.T01:CDS
CCGTTCCCCGAGTTGATGGT+TGG 0.508728 1:-98399194 None:intergenic
ATCCTCAAAGGCTTCGGCAA+TGG 0.509074 1:-98392655 None:intergenic
TCCTTCCTCTAAAGCTACCA+TGG 0.511148 1:-98399049 None:intergenic
ATAATTGAGCATTCAAAAGT+GGG 0.512229 1:-98400900 None:intergenic
GATGTATTTGTGGGAAGGGA+AGG 0.514209 1:+98401588 MsG0180005978.01.T01:CDS
CACTCTCAGTGATAAGCTCC+GGG 0.515701 1:+98397779 MsG0180005978.01.T01:intron
CATTGCATCAGATGTATTTG+TGG 0.517401 1:+98401578 MsG0180005978.01.T01:CDS
GATCTTTCCACAAAGGTTCA+GGG 0.519873 1:+98392675 MsG0180005978.01.T01:CDS
CTGTGTCACGGGCCACATCA+TGG 0.522770 1:-98393433 None:intergenic
ATCAGATGTATTTGTGGGAA+GGG 0.529411 1:+98401584 MsG0180005978.01.T01:CDS
TCTTCTGTGAGATCAGTTCA+AGG 0.531493 1:-98400872 None:intergenic
TTGTGCACCGTATCACTCAT+GGG 0.532403 1:+98393841 MsG0180005978.01.T01:CDS
CAATCTGCCAACCATCAACT+CGG 0.533197 1:+98399187 MsG0180005978.01.T01:CDS
AAAGAGATTTCAGATCTTGA+GGG 0.537696 1:+98398811 MsG0180005978.01.T01:CDS
ATTGCATCAGATGTATTTGT+GGG 0.540297 1:+98401579 MsG0180005978.01.T01:CDS
TTCAGTTCACGCTGTTCCGG+AGG 0.543328 1:-98400792 None:intergenic
ATCAGATAAACAAAGACCTC+CGG 0.544501 1:+98400776 MsG0180005978.01.T01:CDS
TTAAGTGCTTGCTCAACAAA+TGG 0.544583 1:-98399648 None:intergenic
TACTTCTGAGCTAGTAACTT+GGG 0.545379 1:+98399449 MsG0180005978.01.T01:CDS
CATCAGATGTATTTGTGGGA+AGG 0.550806 1:+98401583 MsG0180005978.01.T01:CDS
CTGACTCCCCATGAGTGATA+CGG 0.553379 1:-98393848 None:intergenic
TGACATAGAAATTAAACACT+TGG 0.558914 1:-98400554 None:intergenic
CAGCGGAGAAGAAGATGAGA+AGG 0.559369 1:+98394664 MsG0180005978.01.T01:CDS
AACGTAGGCACTGGGATCAA+AGG 0.559903 1:-98397817 None:intergenic
AATCTGCCAACCATCAACTC+GGG 0.563979 1:+98399188 MsG0180005978.01.T01:CDS
TGTCATCTCTTAGAGGCTAG+TGG 0.567934 1:+98399588 MsG0180005978.01.T01:CDS
ACTAGCTCAGAAGTATATGC+AGG 0.571093 1:-98399441 None:intergenic
CTCTAACGAGATCAAGACCC+TGG 0.574080 1:-98393499 None:intergenic
CTTTGAGGATCTTTCCACAA+AGG 0.574860 1:+98392668 MsG0180005978.01.T01:CDS
GATCTGTACTCACCGTATGA+AGG 0.576546 1:-98398420 None:intergenic
GAAAGAGATGGATGAATCCA+TGG 0.577140 1:+98399032 MsG0180005978.01.T01:intron
CTTTGTGGAAAGATCCTCAA+AGG 0.582564 1:-98392667 None:intergenic
TCAGACGATCAACTTCGCGC+TGG 0.582613 1:-98400824 None:intergenic
TCACTCATGGGGAGTCAGAA+CGG 0.583291 1:+98393853 MsG0180005978.01.T01:CDS
AAACATGAACCAATGCAGCT+TGG 0.584693 1:-98398867 None:intergenic
TGCTCAGCTACATGGACTGG+TGG 0.589627 1:+98393370 MsG0180005978.01.T01:intron
GTATGCTCAGCTACATGGAC+TGG 0.590660 1:+98393367 MsG0180005978.01.T01:intron
TTGGAAGCAACGTAGGCACT+GGG 0.590892 1:-98397825 None:intergenic
CCAACCATCAACTCGGGGAA+CGG 0.591579 1:+98399194 MsG0180005978.01.T01:CDS
CTGTTGATAAATGCAATGCC+AGG 0.594747 1:+98400579 MsG0180005978.01.T01:CDS
ACCTCCTGATGCAGCTATCG+AGG 0.595434 1:-98399523 None:intergenic
GCTTCGGCAATGGAAGAAAG+AGG 0.598100 1:-98392645 None:intergenic
TCCATGGTAGCTTTAGAGGA+AGG 0.604289 1:+98399048 MsG0180005978.01.T01:CDS
TCTCTTAGAGGCTAGTGGAA+TGG 0.605218 1:+98399593 MsG0180005978.01.T01:CDS
CTAAAATGTTTAAGTAACAC+AGG 0.606071 1:-98399624 None:intergenic
CCTATTGGCTGAGAAAGAGA+TGG 0.609816 1:+98399020 MsG0180005978.01.T01:intron
ATCTCGCAGCATGAACGAGA+AGG 0.613434 1:+98397848 MsG0180005978.01.T01:CDS
AGAAAGGGGAGATACCTGAA+TGG 0.616037 1:+98400937 MsG0180005978.01.T01:CDS
GGTGAAGTCCTTCTAGTGCA+AGG 0.617281 1:-98400533 None:intergenic
TGATATTTATCTGAAAGAAG+TGG 0.618563 1:+98393796 MsG0180005978.01.T01:CDS
GTCTAAGCGAATATGTTGAG+TGG 0.619668 1:-98392715 None:intergenic
TGAAATGGAATACGTTGCCA+AGG 0.620132 1:+98392806 MsG0180005978.01.T01:CDS
GCGAGATTTGGAAGCAACGT+AGG 0.634328 1:-98397832 None:intergenic
GTATTCTATAACTGGACGTG+AGG 0.634779 1:-98394697 None:intergenic
GCCTCGATAGCTGCATCAGG+AGG 0.642479 1:+98399522 MsG0180005978.01.T01:CDS
AAGGTTCAGGGAATCAAGAA+CGG 0.645785 1:+98392687 MsG0180005978.01.T01:CDS
GGCGTCAACAGCTTATGGAG+AGG 0.646741 1:+98393817 MsG0180005978.01.T01:CDS
GGGAACGGAGATTCGATCAA+CGG 0.647088 1:+98399209 MsG0180005978.01.T01:CDS
CTTCTGTGAGATCAGTTCAA+GGG 0.647304 1:-98400871 None:intergenic
ATGGCTAAAGAAATTAAACA+AGG 0.647355 1:+98399078 MsG0180005978.01.T01:CDS
CTCGAGCCGACAACTTATGG+AGG 0.651664 1:+98399324 MsG0180005978.01.T01:CDS
TAAGCGAATATGTTGAGTGG+AGG 0.653086 1:-98392712 None:intergenic
TGGCTAAAGAAATTAAACAA+GGG 0.659812 1:+98399079 MsG0180005978.01.T01:CDS
ATCTGCCAACCATCAACTCG+GGG 0.662351 1:+98399189 MsG0180005978.01.T01:CDS
AGAAGTAGCGTATGAGCACG+AGG 0.667862 1:-98399261 None:intergenic
TGTGCACCGTATCACTCATG+GGG 0.681218 1:+98393842 MsG0180005978.01.T01:CDS
TGTTATTGCAGAGCAATCAG+CGG 0.688575 1:+98394647 MsG0180005978.01.T01:intron
AGATGTAATTGACCATGATG+TGG 0.712076 1:+98393421 MsG0180005978.01.T01:CDS
AATCTACGCAGAGTTCGCCA+GGG 0.712951 1:+98393482 MsG0180005978.01.T01:CDS
GCTTTGTAAAGCTTACGGAG+TGG 0.723416 1:+98401551 MsG0180005978.01.T01:CDS
GAAAGTTTGATTACAGCACG+CGG 0.737041 1:-98400717 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAATAATAATAATAATAA+TGG - Chr1:98396420-98396439 None:intergenic 0.0%
!! AAAAAAAGAACAAAAAAATT+AGG + Chr1:98394891-98394910 MsG0180005978.01.T01:intron 10.0%
!! AATATCTATTATATTATCAT+GGG - Chr1:98399954-98399973 None:intergenic 10.0%
!! TAATATCTATTATATTATCA+TGG - Chr1:98399955-98399974 None:intergenic 10.0%
!!! ATAAATTTTTGATACATTAA+GGG - Chr1:98394058-98394077 None:intergenic 10.0%
!!! TATAAATTTTTGATACATTA+AGG - Chr1:98394059-98394078 None:intergenic 10.0%
!! AAAATTATGATTACGAAATT+TGG + Chr1:98398601-98398620 MsG0180005978.01.T01:intron 15.0%
!! AGCAATAATTCAAATATAAT+AGG - Chr1:98395461-98395480 None:intergenic 15.0%
!! ATATATCAAAAACAGAAAAA+TGG + Chr1:98398968-98398987 MsG0180005978.01.T01:intron 15.0%
!! GCAATAATTCAAATATAATA+GGG - Chr1:98395460-98395479 None:intergenic 15.0%
!! TTCTAATTCAATCTTATATA+AGG + Chr1:98397568-98397587 MsG0180005978.01.T01:intron 15.0%
!!! AATCTTTCTTTTATACTATT+AGG + Chr1:98400266-98400285 MsG0180005978.01.T01:intron 15.0%
!!! ATTAGTTTATCATATTATCT+GGG + Chr1:98393310-98393329 MsG0180005978.01.T01:intron 15.0%
!!! ATTGTATTTTTCTTTACAAT+GGG - Chr1:98395716-98395735 None:intergenic 15.0%
!!! TACAACATATGAAAATATTT+TGG - Chr1:98396497-98396516 None:intergenic 15.0%
!!! TATTAGTTTATCATATTATC+TGG + Chr1:98393309-98393328 MsG0180005978.01.T01:intron 15.0%
!!! TGAATATATGTTTTTTTGAA+TGG + Chr1:98401298-98401317 MsG0180005978.01.T01:intron 15.0%
!! AAAATAAACAGACTAATGAA+AGG - Chr1:98394455-98394474 None:intergenic 20.0%
!! AAATAAACAGACTAATGAAA+GGG - Chr1:98394454-98394473 None:intergenic 20.0%
!! AAGAAATTGTAGAAAGTTAT+CGG + Chr1:98395347-98395366 MsG0180005978.01.T01:intron 20.0%
!! AAGATATTCATATAAGTGAA+AGG + Chr1:98398095-98398114 MsG0180005978.01.T01:intron 20.0%
!! AATAAAATTAAGTGAAAGAG+AGG + Chr1:98396942-98396961 MsG0180005978.01.T01:intron 20.0%
!! ACAACACAAAGATTTATATA+AGG - Chr1:98394499-98394518 None:intergenic 20.0%
!! AGGAATAGAATCATATATTA+GGG + Chr1:98400286-98400305 MsG0180005978.01.T01:intron 20.0%
!! ATAATTTGACATTTGATACA+AGG + Chr1:98392931-98392950 MsG0180005978.01.T01:intron 20.0%
!! ATAGACATTATAATAACTTG+AGG - Chr1:98397395-98397414 None:intergenic 20.0%
!! ATATATGATGCATAAGAATT+TGG - Chr1:98398532-98398551 None:intergenic 20.0%
!! CTGTATATACATAATCTATT+TGG + Chr1:98394952-98394971 MsG0180005978.01.T01:intron 20.0%
!! GCAAAAATAGTCAAAATTAA+AGG + Chr1:98395089-98395108 MsG0180005978.01.T01:intron 20.0%
!! TAGATCAACAACTAATAATT+AGG + Chr1:98395811-98395830 MsG0180005978.01.T01:intron 20.0%
!! TAGGAATAGAATCATATATT+AGG + Chr1:98400285-98400304 MsG0180005978.01.T01:intron 20.0%
!! TATATACATAATCTATTTGG+AGG + Chr1:98394955-98394974 MsG0180005978.01.T01:intron 20.0%
!! TATCGAATGATCTAATATTT+AGG - Chr1:98397531-98397550 None:intergenic 20.0%
!! TCAAATCAATATGTCAATAA+TGG + Chr1:98397681-98397700 MsG0180005978.01.T01:intron 20.0%
!! TCAATATTTGCATTGTTTAT+AGG + Chr1:98398310-98398329 MsG0180005978.01.T01:intron 20.0%
!! TTATCAATGTATTCTATAAC+TGG - Chr1:98394708-98394727 None:intergenic 20.0%
!! TTCATGAATTTCTTAACTTT+AGG - Chr1:98396124-98396143 None:intergenic 20.0%
!!! AAAAATATTGTGAGAGTTTT+AGG + Chr1:98393156-98393175 MsG0180005978.01.T01:intron 20.0%
!!! AAAGTGTTACATGTATAAAT+AGG - Chr1:98393561-98393580 None:intergenic 20.0%
!!! AAATTAGGATTTTGCTAAAA+CGG + Chr1:98394906-98394925 MsG0180005978.01.T01:intron 20.0%
!!! ACTCTATAATGCTTTTATAT+TGG + Chr1:98394260-98394279 MsG0180005978.01.T01:intron 20.0%
!!! ATTATTTCTATGTAAGATGA+AGG - Chr1:98394615-98394634 None:intergenic 20.0%
!!! ATTTTGGAAATATAGATGAA+TGG - Chr1:98397212-98397231 None:intergenic 20.0%
!!! CATTGTATTTTTCTTTACAA+TGG - Chr1:98395717-98395736 None:intergenic 20.0%
!!! CATTTTCTATATTATTGTTC+AGG + Chr1:98401527-98401546 MsG0180005978.01.T01:intron 20.0%
!!! CTATTTTGTAAAATTATTGC+AGG + Chr1:98400080-98400099 MsG0180005978.01.T01:intron 20.0%
!!! GATTAAATATGAGTGAATTT+TGG - Chr1:98397228-98397247 None:intergenic 20.0%
!!! GTCTTATGTTACTAATTTTA+TGG + Chr1:98394094-98394113 MsG0180005978.01.T01:intron 20.0%
!!! TACTTTAATTCTCTAAAGTA+TGG - Chr1:98398145-98398164 None:intergenic 20.0%
!!! TATGATTATATTTTTTTGGC+TGG - Chr1:98395593-98395612 None:intergenic 20.0%
!!! TTAAGGATTTTATTCTTTGT+TGG - Chr1:98400412-98400431 None:intergenic 20.0%
!!! TTGTATTTTTCTTTACAATG+GGG - Chr1:98395715-98395734 None:intergenic 20.0%
!!! TTGTTTTGTTTTGTTATGTT+CGG + Chr1:98393952-98393971 MsG0180005978.01.T01:intron 20.0%
!!! TTTTGAATGCTCAATTATTT+TGG + Chr1:98400905-98400924 MsG0180005978.01.T01:CDS 20.0%
! AAAACAGAAAAATGGCTAAT+AGG + Chr1:98398976-98398995 MsG0180005978.01.T01:intron 25.0%
! AAAATCTCCTACCTTAAATA+AGG + Chr1:98395315-98395334 MsG0180005978.01.T01:intron 25.0%
! AAACTAGAATAAGAAGAAAC+AGG - Chr1:98399778-98399797 None:intergenic 25.0%
! AACAAAGAAAAACCACTATA+CGG - Chr1:98394307-98394326 None:intergenic 25.0%
! AACTAGAATAAGAAGAAACA+GGG - Chr1:98399777-98399796 None:intergenic 25.0%
! AAGATTTATATAAGGCTTCT+CGG - Chr1:98394491-98394510 None:intergenic 25.0%
! AATAATTGAGCATTCAAAAG+TGG - Chr1:98400904-98400923 None:intergenic 25.0%
! AATTGTTGTGATTCTTTCAA+TGG + Chr1:98397047-98397066 MsG0180005978.01.T01:intron 25.0%
! ACCAAAAAAGTTTCTTCTAT+TGG - Chr1:98395679-98395698 None:intergenic 25.0%
! ACTAATAGAATACACATTTG+AGG + Chr1:98394163-98394182 MsG0180005978.01.T01:intron 25.0%
! AGAAATTGTAGAAAGTTATC+GGG + Chr1:98395348-98395367 MsG0180005978.01.T01:intron 25.0%
! AGACCAAGATTAAAAACTAA+TGG + Chr1:98396172-98396191 MsG0180005978.01.T01:intron 25.0%
! AGAGAATCAGAAATTCAATT+AGG + Chr1:98400369-98400388 MsG0180005978.01.T01:intron 25.0%
! ATAATCATATATTGAGTGAG+CGG + Chr1:98395604-98395623 MsG0180005978.01.T01:intron 25.0%
! ATAATCGATTAATGTTGATC+TGG - Chr1:98395881-98395900 None:intergenic 25.0%
! ATAATTGAGCATTCAAAAGT+GGG - Chr1:98400903-98400922 None:intergenic 25.0%
! ATATAGATGAATGGTTACAA+TGG - Chr1:98397203-98397222 None:intergenic 25.0%
! ATGGCTAAAGAAATTAAACA+AGG + Chr1:98399078-98399097 MsG0180005978.01.T01:CDS 25.0%
! ATTGTTGTGATTCTTTCAAT+GGG + Chr1:98397048-98397067 MsG0180005978.01.T01:intron 25.0%
! CACTTATATGAATATCTTCT+AGG - Chr1:98398093-98398112 None:intergenic 25.0%
! CATTACATAAAAATGGAAAG+GGG - Chr1:98400440-98400459 None:intergenic 25.0%
! CTAAAATGTTTAAGTAACAC+AGG - Chr1:98399627-98399646 None:intergenic 25.0%
! CTCTCTTATAACAATAAAGT+GGG - Chr1:98395399-98395418 None:intergenic 25.0%
! GATACATTCAATAACTTCTA+TGG - Chr1:98401416-98401435 None:intergenic 25.0%
! GCATTACATAAAAATGGAAA+GGG - Chr1:98400441-98400460 None:intergenic 25.0%
! GTGTAAAACATTACATACAT+TGG - Chr1:98393113-98393132 None:intergenic 25.0%
! TAATAGTTTACTCCTTCATA+GGG + Chr1:98401348-98401367 MsG0180005978.01.T01:intron 25.0%
! TATATCACACAAGAAAGAAA+AGG - Chr1:98400463-98400482 None:intergenic 25.0%
! TCAGATTAATTCAATGAGTT+AGG + Chr1:98397982-98398001 MsG0180005978.01.T01:intron 25.0%
! TCTCTTATAACAATAAAGTG+GGG - Chr1:98395398-98395417 None:intergenic 25.0%
! TCTTATGCATCATATATGAA+GGG + Chr1:98398535-98398554 MsG0180005978.01.T01:intron 25.0%
! TGACATAGAAATTAAACACT+TGG - Chr1:98400557-98400576 None:intergenic 25.0%
! TGATATTTATCTGAAAGAAG+TGG + Chr1:98393796-98393815 MsG0180005978.01.T01:CDS 25.0%
! TGATCAAATGAAAGCAAAAA+GGG - Chr1:98398266-98398285 None:intergenic 25.0%
! TGATGTGAATATATGATGAT+TGG + Chr1:98393345-98393364 MsG0180005978.01.T01:intron 25.0%
! TGGCTAAAGAAATTAAACAA+GGG + Chr1:98399079-98399098 MsG0180005978.01.T01:CDS 25.0%
! TTAATAGTTTACTCCTTCAT+AGG + Chr1:98401347-98401366 MsG0180005978.01.T01:intron 25.0%
! TTCTTATGCATCATATATGA+AGG + Chr1:98398534-98398553 MsG0180005978.01.T01:intron 25.0%
! TTCTTTCTTGTGTGATATAT+AGG + Chr1:98400464-98400483 MsG0180005978.01.T01:intron 25.0%
! TTGATCAAATGAAAGCAAAA+AGG - Chr1:98398267-98398286 None:intergenic 25.0%
!! ACTTCTGGAAGAAAAAAAAA+AGG - Chr1:98396305-98396324 None:intergenic 25.0%
!! ATAAACCCTTTTTATCAAGT+TGG - Chr1:98397953-98397972 None:intergenic 25.0%
!! CAACATCATTCACATTTTTA+AGG - Chr1:98398042-98398061 None:intergenic 25.0%
!! GGGTATTATAATTTCTTTTG+AGG + Chr1:98397074-98397093 MsG0180005978.01.T01:intron 25.0%
!! TTGTTTGTTACCTGAAAAAT+TGG - Chr1:98400972-98400991 None:intergenic 25.0%
!! TTTTTGCTTTCATTTGATCA+AGG + Chr1:98398266-98398285 MsG0180005978.01.T01:intron 25.0%
!!! AATACTGAGGTTTTAAGTAA+AGG - Chr1:98398746-98398765 None:intergenic 25.0%
!!! AATTGCGTTTTGATTTTACT+GGG - Chr1:98396854-98396873 None:intergenic 25.0%
!!! AGTCCATTAGTTTTTAATCT+TGG - Chr1:98396178-98396197 None:intergenic 25.0%
!!! ATCATTCACATTTTTAAGGA+CGG - Chr1:98398038-98398057 None:intergenic 25.0%
!!! ATGCTCAATTATTTTGGATA+TGG + Chr1:98400911-98400930 MsG0180005978.01.T01:CDS 25.0%
!!! ATTTTGGAATCCAAAAATAG+GGG + Chr1:98395267-98395286 MsG0180005978.01.T01:intron 25.0%
!!! ATTTTTCAGGTAACAAACAA+AGG + Chr1:98400972-98400991 MsG0180005978.01.T01:intron 25.0%
!!! GAAAAGGCATTACATAAAAA+TGG - Chr1:98400447-98400466 None:intergenic 25.0%
!!! GATTTTGGAATCCAAAAATA+GGG + Chr1:98395266-98395285 MsG0180005978.01.T01:intron 25.0%
!!! TCCAATAGAAGAAACTTTTT+TGG + Chr1:98395675-98395694 MsG0180005978.01.T01:intron 25.0%
!!! TGAATGATGTTGTGTTTTTA+AGG + Chr1:98398050-98398069 MsG0180005978.01.T01:intron 25.0%
AAACTTTCACATAGCACAAA+AGG + Chr1:98400732-98400751 MsG0180005978.01.T01:CDS 30.0%
AAAGAGATTTCAGATCTTGA+GGG + Chr1:98398811-98398830 MsG0180005978.01.T01:CDS 30.0%
AATCAAAAAATCGTGATGCA+TGG - Chr1:98397325-98397344 None:intergenic 30.0%
ACAGACCAAAATTCACAAAA+AGG - Chr1:98398573-98398592 None:intergenic 30.0%
ACATTCAATAACTTCTATGG+AGG - Chr1:98401413-98401432 None:intergenic 30.0%
ACCAAATCCTTATTATCACT+AGG + Chr1:98400163-98400182 MsG0180005978.01.T01:intron 30.0%
ACCAGTAGGAATAATAATAC+TGG + Chr1:98399745-98399764 MsG0180005978.01.T01:intron 30.0%
ACTACTATCACTATGCTTAT+AGG - Chr1:98401079-98401098 None:intergenic 30.0%
AGAGTGTAGGTAGAAAAATT+GGG - Chr1:98395435-98395454 None:intergenic 30.0%
ATAAAACCCGAAATGCAATA+GGG - Chr1:98395202-98395221 None:intergenic 30.0%
ATCGTCATTGCTTATCTTAA+TGG + Chr1:98392838-98392857 MsG0180005978.01.T01:intron 30.0%
ATGAATGAGTTTCTTTACGA+AGG - Chr1:98395137-98395156 None:intergenic 30.0%
ATTAGAACAACAAGTTACTC+AGG + Chr1:98396782-98396801 MsG0180005978.01.T01:intron 30.0%
ATTGCATCAGATGTATTTGT+GGG + Chr1:98401579-98401598 MsG0180005978.01.T01:CDS 30.0%
ATTTCAGTATTGCTCTTTCA+AGG - Chr1:98395004-98395023 None:intergenic 30.0%
CAAAATTCACAAAAAGGCAA+TGG - Chr1:98398567-98398586 None:intergenic 30.0%
CATGTCCAACTTGATAAAAA+GGG + Chr1:98397945-98397964 MsG0180005978.01.T01:intron 30.0%
CATTGAGCTTTACAAAAAGT+TGG - Chr1:98393916-98393935 None:intergenic 30.0%
CCAAATCCTTATTATCACTA+GGG + Chr1:98400164-98400183 MsG0180005978.01.T01:intron 30.0%
CCAATGAAATATTTCGAGAA+AGG - Chr1:98394737-98394756 None:intergenic 30.0%
CCACTTTATTGTTATAAGAG+AGG + Chr1:98395397-98395416 MsG0180005978.01.T01:intron 30.0%
CCTCTCTTATAACAATAAAG+TGG - Chr1:98395400-98395419 None:intergenic 30.0%
CCTTTCTCGAAATATTTCAT+TGG + Chr1:98394734-98394753 MsG0180005978.01.T01:CDS 30.0%
CTAATTACTCTTCCTTCATA+CGG + Chr1:98398408-98398427 MsG0180005978.01.T01:CDS 30.0%
CTTGAAATCTTACAATTGGA+TGG + Chr1:98400510-98400529 MsG0180005978.01.T01:CDS 30.0%
CTTTAAGCATACGATGAATT+TGG - Chr1:98396703-98396722 None:intergenic 30.0%
GAAAGAGCAATACTGAAATT+TGG + Chr1:98395005-98395024 MsG0180005978.01.T01:intron 30.0%
GAAATTGTAGAAAGTTATCG+GGG + Chr1:98395349-98395368 MsG0180005978.01.T01:intron 30.0%
GAATGGTTACAATGGTTAAT+TGG - Chr1:98397195-98397214 None:intergenic 30.0%
GACAAAAATGACAGTTTACT+TGG - Chr1:98394003-98394022 None:intergenic 30.0%
GACACTTGAAATCTTACAAT+TGG + Chr1:98400506-98400525 MsG0180005978.01.T01:CDS 30.0%
GAGAGGTAAAATTTACCTAA+CGG + Chr1:98396959-98396978 MsG0180005978.01.T01:intron 30.0%
GATGCATTTACATACTATAG+TGG + Chr1:98394235-98394254 MsG0180005978.01.T01:intron 30.0%
GATTCCAAAATCCAACAAAT+GGG - Chr1:98395258-98395277 None:intergenic 30.0%
GATTTGAGTATATAGCAAGT+TGG + Chr1:98394552-98394571 MsG0180005978.01.T01:intron 30.0%
GGCATTACATAAAAATGGAA+AGG - Chr1:98400442-98400461 None:intergenic 30.0%
GTATTATTATTCCTACTGGT+TGG - Chr1:98399745-98399764 None:intergenic 30.0%
GTGAAATGGTTGAAAAAACA+AGG - Chr1:98399380-98399399 None:intergenic 30.0%
GTTAGATAAAAGGTTTCTCA+TGG - Chr1:98398848-98398867 None:intergenic 30.0%
GTTTACTTTCATACCAGATT+TGG + Chr1:98393649-98393668 MsG0180005978.01.T01:intron 30.0%
GTTTCAAATAGCAAATACTG+AGG - Chr1:98398759-98398778 None:intergenic 30.0%
TACACATTTGAGGATCAATA+TGG + Chr1:98394173-98394192 MsG0180005978.01.T01:intron 30.0%
TCAAACCAACCCATTAAAAT+TGG + Chr1:98396324-98396343 MsG0180005978.01.T01:intron 30.0%
TCATTCGATATCTATTGTGA+TGG + Chr1:98397541-98397560 MsG0180005978.01.T01:intron 30.0%
TCTGGAAGAAAAAAAAAAGG+AGG - Chr1:98396302-98396321 None:intergenic 30.0%
TCTTTGTGTTGTGAAACAAA+TGG + Chr1:98394507-98394526 MsG0180005978.01.T01:intron 30.0%
TGAAATAAGTTGTTGGGTAA+TGG + Chr1:98396084-98396103 MsG0180005978.01.T01:intron 30.0%
TGAATGAGTTTCTTTACGAA+GGG - Chr1:98395136-98395155 None:intergenic 30.0%
TGACATAATGAGTAACTTCA+GGG - Chr1:98397154-98397173 None:intergenic 30.0%
TGCATAAGAATTTGGAAATG+TGG - Chr1:98398524-98398543 None:intergenic 30.0%
TGGTATGAAAGTAAACAACA+TGG - Chr1:98393645-98393664 None:intergenic 30.0%
TGTCATCATCACAAATATCA+AGG - Chr1:98393025-98393044 None:intergenic 30.0%
TTAAAGTAACCACATTTGAC+AGG - Chr1:98393723-98393742 None:intergenic 30.0%
TTAATTAGTCAGTTTCTCAG+CGG + Chr1:98394844-98394863 MsG0180005978.01.T01:intron 30.0%
TTACAAACACTTCACATTGA+AGG + Chr1:98393060-98393079 MsG0180005978.01.T01:intron 30.0%
TTAGAACAACAAGTTACTCA+GGG + Chr1:98396783-98396802 MsG0180005978.01.T01:intron 30.0%
TTATCTTGTTGACCTTAAGA+AGG + Chr1:98398352-98398371 MsG0180005978.01.T01:CDS 30.0%
TTCTATGTAAGATGAAGGAT+TGG - Chr1:98394610-98394629 None:intergenic 30.0%
TTGAATGTATCCACATAAGT+TGG + Chr1:98401425-98401444 MsG0180005978.01.T01:intron 30.0%
TTGACATAATGAGTAACTTC+AGG - Chr1:98397155-98397174 None:intergenic 30.0%
TTGTTGTGATTCTTTCAATG+GGG + Chr1:98397049-98397068 MsG0180005978.01.T01:intron 30.0%
TTTAATGTAACTGCATGTGT+TGG - Chr1:98400054-98400073 None:intergenic 30.0%
TTTAGAGGAAGGAGAAAAAA+TGG + Chr1:98399059-98399078 MsG0180005978.01.T01:CDS 30.0%
TTTCAGTATTGCTCTTTCAA+GGG - Chr1:98395003-98395022 None:intergenic 30.0%
TTTGAATGTATTGCATGCAT+TGG + Chr1:98401184-98401203 MsG0180005978.01.T01:intron 30.0%
TTTGTAAAGCTCAATGAAAC+AGG + Chr1:98393920-98393939 MsG0180005978.01.T01:CDS 30.0%
! AAGAGTGTAGGTAGAAAAAT+TGG - Chr1:98395436-98395455 None:intergenic 30.0%
! AAGCTTTCAATTTGAAGTGA+CGG - Chr1:98400011-98400030 None:intergenic 30.0%
! ATATAATAGGGAAAGAGTGT+AGG - Chr1:98395448-98395467 None:intergenic 30.0%
! ATTAGTGTTGAAAAATCTGG+GGG + Chr1:98399233-98399252 MsG0180005978.01.T01:CDS 30.0%
! CATTAGTGTTGAAAAATCTG+GGG + Chr1:98399232-98399251 MsG0180005978.01.T01:CDS 30.0%
! CATTGCCTTTTTGTGAATTT+TGG + Chr1:98398565-98398584 MsG0180005978.01.T01:intron 30.0%
! CCATACAGTTTTTCATCAAA+AGG - Chr1:98395063-98395082 None:intergenic 30.0%
! CCTTTTGATGAAAAACTGTA+TGG + Chr1:98395060-98395079 MsG0180005978.01.T01:intron 30.0%
! GAGTTTAAAGTAACCAAATC+TGG - Chr1:98393665-98393684 None:intergenic 30.0%
! GCATTAGTGTTGAAAAATCT+GGG + Chr1:98399231-98399250 MsG0180005978.01.T01:CDS 30.0%
! GTTTTTAATCTTGGTCTGAT+TGG - Chr1:98396169-98396188 None:intergenic 30.0%
! TCTCTCAGTACCAATTTTAA+TGG - Chr1:98396337-98396356 None:intergenic 30.0%
! TGATATTTGTGATGATGACA+TGG + Chr1:98393025-98393044 MsG0180005978.01.T01:intron 30.0%
! TTATTGCCAGTCCTTATTTA+AGG - Chr1:98395329-98395348 None:intergenic 30.0%
! TTTAGGATACTTCATTATGC+TGG + Chr1:98393173-98393192 MsG0180005978.01.T01:intron 30.0%
! TTTTGAATGGCAAATGCTAT+TGG + Chr1:98401311-98401330 MsG0180005978.01.T01:intron 30.0%
! TTTTTGTCTGTGTTCAGTAA+TGG - Chr1:98399145-98399164 None:intergenic 30.0%
!! ATTCAATTAGGTTGAAAGTG+AGG + Chr1:98400381-98400400 MsG0180005978.01.T01:intron 30.0%
!! ATTGCATAGGGAAAAGTATT+TGG - Chr1:98401390-98401409 None:intergenic 30.0%
!! CTCTCAGTACCAATTTTAAT+GGG - Chr1:98396336-98396355 None:intergenic 30.0%
!! TTTTGAGAATCCCTTTGTTT+TGG + Chr1:98393584-98393603 MsG0180005978.01.T01:intron 30.0%
!!! ATTGCGTTTTGATTTTACTG+GGG - Chr1:98396853-98396872 None:intergenic 30.0%
!!! CTCAATTATTTTGGATATGG+AGG + Chr1:98400914-98400933 MsG0180005978.01.T01:CDS 30.0%
!!! GAATTGCGTTTTGATTTTAC+TGG - Chr1:98396855-98396874 None:intergenic 30.0%
!!! GGATTTTGGAATCCAAAAAT+AGG + Chr1:98395265-98395284 MsG0180005978.01.T01:intron 30.0%
!!! TTTGAGAATCCCTTTGTTTT+GGG + Chr1:98393585-98393604 MsG0180005978.01.T01:intron 30.0%
!!! TTTTGGAATCCAAAAATAGG+GGG + Chr1:98395268-98395287 MsG0180005978.01.T01:intron 30.0%
AACACATGCATAAGAAGACA+TGG - Chr1:98398218-98398237 None:intergenic 35.0%
AAGGAGAAGCGAAAAAGTTT+CGG - Chr1:98399487-98399506 None:intergenic 35.0%
AAGTGTAGAGCTATAACCAA+AGG - Chr1:98401011-98401030 None:intergenic 35.0%
ACACATGCATAAGAAGACAT+GGG - Chr1:98398217-98398236 None:intergenic 35.0%
ACAGAGCATAACCAAAATGA+TGG + Chr1:98396026-98396045 MsG0180005978.01.T01:intron 35.0%
ACTTTATACCCACGTATTTC+TGG + Chr1:98393228-98393247 MsG0180005978.01.T01:intron 35.0%
AGATGTAATTGACCATGATG+TGG + Chr1:98393421-98393440 MsG0180005978.01.T01:CDS 35.0%
AGGACTGTGAAATAAGTTGT+TGG + Chr1:98396077-98396096 MsG0180005978.01.T01:intron 35.0%
AGGATGACATCTTACAAGAA+GGG - Chr1:98394418-98394437 None:intergenic 35.0%
AGTAACATAAGACACACTTG+AGG - Chr1:98394087-98394106 None:intergenic 35.0%
AGTTACCAATGCTTGATGAA+AGG - Chr1:98397738-98397757 None:intergenic 35.0%
ATACTTCTGAGCTAGTAACT+TGG + Chr1:98399448-98399467 MsG0180005978.01.T01:CDS 35.0%
ATCAGATAAACAAAGACCTC+CGG + Chr1:98400776-98400795 MsG0180005978.01.T01:CDS 35.0%
ATCAGATGTATTTGTGGGAA+GGG + Chr1:98401584-98401603 MsG0180005978.01.T01:CDS 35.0%
ATCCTTATTATCACTAGGGA+TGG + Chr1:98400168-98400187 MsG0180005978.01.T01:intron 35.0%
ATCTGATACTGCTTGTGAAA+TGG - Chr1:98399394-98399413 None:intergenic 35.0%
ATGACGATGATGATATACCT+TGG - Chr1:98392826-98392845 None:intergenic 35.0%
ATGAGTTAGGTAAGATCACA+CGG + Chr1:98397995-98398014 MsG0180005978.01.T01:intron 35.0%
ATGCAGCTTGGTTAGATAAA+AGG - Chr1:98398858-98398877 None:intergenic 35.0%
ATGTCTTCGATATGAAGTCT+CGG + Chr1:98401480-98401499 MsG0180005978.01.T01:intron 35.0%
CAAAGAGATTTCAGATCTTG+AGG + Chr1:98398810-98398829 MsG0180005978.01.T01:CDS 35.0%
CAACGAGTCTATCTAATCAA+AGG + Chr1:98392989-98393008 MsG0180005978.01.T01:intron 35.0%
CATTGCATCAGATGTATTTG+TGG + Chr1:98401578-98401597 MsG0180005978.01.T01:CDS 35.0%
CCATGTCCAACTTGATAAAA+AGG + Chr1:98397944-98397963 MsG0180005978.01.T01:intron 35.0%
CCCTAGTGATAATAAGGATT+TGG - Chr1:98400167-98400186 None:intergenic 35.0%
CTAATTCCTCCATAAGTTGT+CGG - Chr1:98399333-98399352 None:intergenic 35.0%
CTAGAAACACTTTATGCAAG+AGG - Chr1:98398453-98398472 None:intergenic 35.0%
CTCGAAATATTTCATTGGAC+TGG + Chr1:98394739-98394758 MsG0180005978.01.T01:CDS 35.0%
GAAAAACAGATTCCGTATAG+TGG + Chr1:98394292-98394311 MsG0180005978.01.T01:intron 35.0%
GAACTTCAACCTCTATAGTT+AGG - Chr1:98396760-98396779 None:intergenic 35.0%
GAATGTCATGAAAAAGAGTG+AGG - Chr1:98396267-98396286 None:intergenic 35.0%
GAGCAATACTGAAATTTGGA+AGG + Chr1:98395009-98395028 MsG0180005978.01.T01:intron 35.0%
GATAAAACCCGAAATGCAAT+AGG - Chr1:98395203-98395222 None:intergenic 35.0%
GCATGTGTTAGACAATGTTA+TGG + Chr1:98398229-98398248 MsG0180005978.01.T01:intron 35.0%
GCCAGTATTATTATTCCTAC+TGG - Chr1:98399749-98399768 None:intergenic 35.0%
GGACTGTGAAATAAGTTGTT+GGG + Chr1:98396078-98396097 MsG0180005978.01.T01:intron 35.0%
GGATTCCAAAATCCAACAAA+TGG - Chr1:98395259-98395278 None:intergenic 35.0%
GTAGTATAACCTATGTGACA+TGG + Chr1:98401094-98401113 MsG0180005978.01.T01:intron 35.0%
GTGTACTACTCTCAAGATTT+CGG - Chr1:98396367-98396386 None:intergenic 35.0%
GTGTCTTATGTTTGTCAGTT+TGG - Chr1:98394121-98394140 None:intergenic 35.0%
GTTACCAATGCTTGATGAAA+GGG - Chr1:98397737-98397756 None:intergenic 35.0%
GTTACCTGAAAAATTGGAGA+AGG - Chr1:98400966-98400985 None:intergenic 35.0%
GTTTACTTTCCTGTCAAATG+TGG + Chr1:98393711-98393730 MsG0180005978.01.T01:intron 35.0%
TACTTCTGAGCTAGTAACTT+GGG + Chr1:98399449-98399468 MsG0180005978.01.T01:CDS 35.0%
TAGATAGACCAGAAATACGT+GGG - Chr1:98393239-98393258 None:intergenic 35.0%
TAGGATGACATCTTACAAGA+AGG - Chr1:98394419-98394438 None:intergenic 35.0%
TCAAAATTAAAGGCTTCACC+TGG + Chr1:98395099-98395118 MsG0180005978.01.T01:intron 35.0%
TCAAACACCCTATTGCATTT+CGG + Chr1:98395192-98395211 MsG0180005978.01.T01:intron 35.0%
TGAAACCCTTAATGTCCTAT+TGG + Chr1:98399005-98399024 MsG0180005978.01.T01:intron 35.0%
TGACAGGAAAGTAAACAACA+TGG - Chr1:98393707-98393726 None:intergenic 35.0%
TGCTTTCAAATTCGCTGAAA+TGG + Chr1:98392791-98392810 MsG0180005978.01.T01:CDS 35.0%
TGGACTTGATTGTTACTAGA+CGG + Chr1:98396192-98396211 MsG0180005978.01.T01:intron 35.0%
TGTCTATATGTTAGTGTCAC+TGG - Chr1:98401135-98401154 None:intergenic 35.0%
TGTTGTGATTCTTTCAATGG+GGG + Chr1:98397050-98397069 MsG0180005978.01.T01:intron 35.0%
TTAAGTGCTTGCTCAACAAA+TGG - Chr1:98399651-98399670 None:intergenic 35.0%
TTGGTTCATGTTTAGCAGAA+GGG + Chr1:98398877-98398896 MsG0180005978.01.T01:intron 35.0%
TTTATCTAACCAAGCTGCAT+TGG + Chr1:98398858-98398877 MsG0180005978.01.T01:CDS 35.0%
TTTCGCTTCTCCTTAAGAAA+CGG + Chr1:98399493-98399512 MsG0180005978.01.T01:CDS 35.0%
TTTGTCTCTAAATGTGTGTG+AGG + Chr1:98394017-98394036 MsG0180005978.01.T01:intron 35.0%
! AAGAAATTCATGAAGCGTCT+AGG + Chr1:98396130-98396149 MsG0180005978.01.T01:intron 35.0%
! ACAAAAAGTTGGTCTCTTGT+TGG - Chr1:98393905-98393924 None:intergenic 35.0%
! ATTGGTTCATGTTTAGCAGA+AGG + Chr1:98398876-98398895 MsG0180005978.01.T01:intron 35.0%
! ATTTTGGATATGGAGGAGAA+AGG + Chr1:98400921-98400940 MsG0180005978.01.T01:CDS 35.0%
! CTCAAGATCTGAAATCTCTT+TGG - Chr1:98398812-98398831 None:intergenic 35.0%
! GATTCTTTGACAGTTTTTGC+TGG + Chr1:98399411-98399430 MsG0180005978.01.T01:CDS 35.0%
! GGCATTAGTGTTGAAAAATC+TGG + Chr1:98399230-98399249 MsG0180005978.01.T01:CDS 35.0%
! GTTTCCTTCTCCAATTTTTC+AGG + Chr1:98400959-98400978 MsG0180005978.01.T01:CDS 35.0%
! TCGAACAACTTTTGTCAACT+AGG + Chr1:98393528-98393547 MsG0180005978.01.T01:CDS 35.0%
! TTTGTTGTAGTCGATCTGTT+CGG + Chr1:98394820-98394839 MsG0180005978.01.T01:intron 35.0%
! TTTTGGATATGGAGGAGAAA+GGG + Chr1:98400922-98400941 MsG0180005978.01.T01:CDS 35.0%
!! AACCGAGCTCTAAAAACTAT+GGG - Chr1:98397100-98397119 None:intergenic 35.0%
!! AGGTAGAACTTTTGAAAACC+CGG - Chr1:98397800-98397819 None:intergenic 35.0%
!! CAGTACCAATTTTAATGGGT+TGG - Chr1:98396332-98396351 None:intergenic 35.0%
!! GAAAAGTATTTGGAGGTCTT+GGG - Chr1:98401380-98401399 None:intergenic 35.0%
!! GATTGTTTCTGCTAGTTGAT+CGG - Chr1:98399172-98399191 None:intergenic 35.0%
!! TATCCACATAAGTTGGTGTT+GGG + Chr1:98401432-98401451 MsG0180005978.01.T01:intron 35.0%
!! TCTGTTCTTTTTCGTTGTCT+TGG + Chr1:98392765-98392784 MsG0180005978.01.T01:CDS 35.0%
!!! ATAGTTTTTAGAGCTCGGTT+CGG + Chr1:98397100-98397119 MsG0180005978.01.T01:intron 35.0%
!!! CCTTTTTATCAAGTTGGACA+TGG - Chr1:98397947-98397966 None:intergenic 35.0%
!!! TTGAGAATCCCTTTGTTTTG+GGG + Chr1:98393586-98393605 MsG0180005978.01.T01:intron 35.0%
AAACATGAACCAATGCAGCT+TGG - Chr1:98398870-98398889 None:intergenic 40.0%
AACCTCAATCCTAACATGTG+AGG + Chr1:98394380-98394399 MsG0180005978.01.T01:intron 40.0%
AAGGTTCAGGGAATCAAGAA+CGG + Chr1:98392687-98392706 MsG0180005978.01.T01:CDS 40.0%
AATAAGAAGAAACAGGGCGT+AGG - Chr1:98399771-98399790 None:intergenic 40.0%
AATGGAAAGGGGAGTGATTA+AGG - Chr1:98400429-98400448 None:intergenic 40.0%
ACACATTTGACAGTGAACCT+CGG - Chr1:98398634-98398653 None:intergenic 40.0%
ACTTCTATGGAGGATTGCAT+AGG - Chr1:98401403-98401422 None:intergenic 40.0%
AGACTTCATATACGAGAGAG+AGG - Chr1:98400228-98400247 None:intergenic 40.0%
AGCAAGACTATAGATCATGG+GGG - Chr1:98395532-98395551 None:intergenic 40.0%
AGCAATATTAAGCTTGAGCG+TGG + Chr1:98400334-98400353 MsG0180005978.01.T01:intron 40.0%
AGCCTCCTATTTCATAGGAA+CGG - Chr1:98396809-98396828 None:intergenic 40.0%
AGGATACGCAATCGCTAAAT+CGG - Chr1:98392628-98392647 None:intergenic 40.0%
AGTGCTCACAAATTCAACTC+TGG + Chr1:98399825-98399844 MsG0180005978.01.T01:intron 40.0%
ATAATGAGTAACTTCAGGGC+CGG - Chr1:98397150-98397169 None:intergenic 40.0%
ATTGGAGAAGGAAACCATTC+AGG - Chr1:98400954-98400973 None:intergenic 40.0%
CAAACACCCTATTGCATTTC+GGG + Chr1:98395193-98395212 MsG0180005978.01.T01:intron 40.0%
CAGCAAGACTATAGATCATG+GGG - Chr1:98395533-98395552 None:intergenic 40.0%
CATCAGATGTATTTGTGGGA+AGG + Chr1:98401583-98401602 MsG0180005978.01.T01:CDS 40.0%
CATGTCTGAATCTTCGTTTC+CGG - Chr1:98398925-98398944 None:intergenic 40.0%
CCAAAATCCAACAAATGGGA+GGG - Chr1:98395254-98395273 None:intergenic 40.0%
CTAAGAGATGACAGTGACTA+AGG - Chr1:98399581-98399600 None:intergenic 40.0%
CTAGATAGACCAGAAATACG+TGG - Chr1:98393240-98393259 None:intergenic 40.0%
CTCAGCCAATAGGACATTAA+GGG - Chr1:98399013-98399032 None:intergenic 40.0%
CTCCTACCTTAAATAAGGAC+TGG + Chr1:98395320-98395339 MsG0180005978.01.T01:intron 40.0%
CTTCTATGGAGGATTGCATA+GGG - Chr1:98401402-98401421 None:intergenic 40.0%
CTTCTGTGAGATCAGTTCAA+GGG - Chr1:98400874-98400893 None:intergenic 40.0%
CTTTGTGGAAAGATCCTCAA+AGG - Chr1:98392670-98392689 None:intergenic 40.0%
GAAAGAGATGGATGAATCCA+TGG + Chr1:98399032-98399051 MsG0180005978.01.T01:intron 40.0%
GAAAGGGTTATTCGCATGTT+AGG - Chr1:98394438-98394457 None:intergenic 40.0%
GAAAGTTTGATTACAGCACG+CGG - Chr1:98400720-98400739 None:intergenic 40.0%
GATCTTTCCACAAAGGTTCA+GGG + Chr1:98392675-98392694 MsG0180005978.01.T01:CDS 40.0%
GCAGCAAGACTATAGATCAT+GGG - Chr1:98395534-98395553 None:intergenic 40.0%
GCATTGTACTGCTATACCAA+TGG - Chr1:98394793-98394812 None:intergenic 40.0%
GTATTCTATAACTGGACGTG+AGG - Chr1:98394700-98394719 None:intergenic 40.0%
GTCTAAGCGAATATGTTGAG+TGG - Chr1:98392718-98392737 None:intergenic 40.0%
GTTACTAGACGGTCATCTAT+TGG + Chr1:98396203-98396222 MsG0180005978.01.T01:intron 40.0%
GTTCAATGTCCATGTCACAT+AGG - Chr1:98401106-98401125 None:intergenic 40.0%
TAAGCGAATATGTTGAGTGG+AGG - Chr1:98392715-98392734 None:intergenic 40.0%
TAGTCACTGTCATCTCTTAG+AGG + Chr1:98399581-98399600 MsG0180005978.01.T01:CDS 40.0%
TCAAAAACCCTCCCATTTGT+TGG + Chr1:98395244-98395263 MsG0180005978.01.T01:intron 40.0%
TCCAAAATCCAACAAATGGG+AGG - Chr1:98395255-98395274 None:intergenic 40.0%
TCTCAGCCAATAGGACATTA+AGG - Chr1:98399014-98399033 None:intergenic 40.0%
TCTTACAAGAAGGGTCATCT+AGG - Chr1:98394409-98394428 None:intergenic 40.0%
TCTTCTGTGAGATCAGTTCA+AGG - Chr1:98400875-98400894 None:intergenic 40.0%
TGAAATGGAATACGTTGCCA+AGG + Chr1:98392806-98392825 MsG0180005978.01.T01:CDS 40.0%
TGCAAACAACTGTGAAACCA+CGG - Chr1:98399905-98399924 None:intergenic 40.0%
TGCCATCCCTAGTGATAATA+AGG - Chr1:98400173-98400192 None:intergenic 40.0%
TGTTATTGCAGAGCAATCAG+CGG + Chr1:98394647-98394666 MsG0180005978.01.T01:intron 40.0%
TTACAATGGGGCTGTCTATT+TGG - Chr1:98395703-98395722 None:intergenic 40.0%
TTCCTATGAAATAGGAGGCT+CGG + Chr1:98396809-98396828 MsG0180005978.01.T01:intron 40.0%
TTTGGATATGGAGGAGAAAG+GGG + Chr1:98400923-98400942 MsG0180005978.01.T01:CDS 40.0%
! AATTCATGAAGCGTCTAGGA+AGG + Chr1:98396134-98396153 MsG0180005978.01.T01:intron 40.0%
! ACTAGCTCAGAAGTATATGC+AGG - Chr1:98399444-98399463 None:intergenic 40.0%
! ACTGAGAATCTAGAAAGCAC+AGG + Chr1:98400611-98400630 MsG0180005978.01.T01:intron 40.0%
! AGATGTTTTCACTGTGTCAC+GGG - Chr1:98393447-98393466 None:intergenic 40.0%
! AGTGTCTTTTAGCAAACTCG+TGG + Chr1:98396589-98396608 MsG0180005978.01.T01:intron 40.0%
! CACAAATTCAACTCTGGTTC+AGG + Chr1:98399831-98399850 MsG0180005978.01.T01:intron 40.0%
! CAGATGTTTTCACTGTGTCA+CGG - Chr1:98393448-98393467 None:intergenic 40.0%
! CAGGAGCTTTGTAAAGCTTA+CGG + Chr1:98401546-98401565 MsG0180005978.01.T01:intron 40.0%
! CTGAGAATCTAGAAAGCACA+GGG + Chr1:98400612-98400631 MsG0180005978.01.T01:intron 40.0%
! CTGTTGATAAATGCAATGCC+AGG + Chr1:98400579-98400598 MsG0180005978.01.T01:CDS 40.0%
! CTTTGAGGATCTTTCCACAA+AGG + Chr1:98392668-98392687 MsG0180005978.01.T01:CDS 40.0%
! GAGAAGGTATATGTGTGTGT+GGG + Chr1:98397864-98397883 MsG0180005978.01.T01:intron 40.0%
! TCCATGAATGTGTCTTTTGC+TGG - Chr1:98394199-98394218 None:intergenic 40.0%
! TGCCAGTCCTTATTTAAGGT+AGG - Chr1:98395325-98395344 None:intergenic 40.0%
! TGTATTGCATGCATTGGTGT+CGG + Chr1:98401190-98401209 MsG0180005978.01.T01:intron 40.0%
!! AGGAGCTTTTTGAAGACGTA+GGG + Chr1:98400484-98400503 MsG0180005978.01.T01:intron 40.0%
!! ATTTACCTAACGGTGTCGTT+TGG + Chr1:98396969-98396988 MsG0180005978.01.T01:intron 40.0%
!! GAACCGAGCTCTAAAAACTA+TGG - Chr1:98397101-98397120 None:intergenic 40.0%
!! GCATAGGGAAAAGTATTTGG+AGG - Chr1:98401387-98401406 None:intergenic 40.0%
!! GGAAAAGTATTTGGAGGTCT+TGG - Chr1:98401381-98401400 None:intergenic 40.0%
!! GTATCCACATAAGTTGGTGT+TGG + Chr1:98401431-98401450 MsG0180005978.01.T01:intron 40.0%
!! TAATGGGTTGGTTTGACTTC+TGG - Chr1:98396320-98396339 None:intergenic 40.0%
!! TAGGAGCTTTTTGAAGACGT+AGG + Chr1:98400483-98400502 MsG0180005978.01.T01:intron 40.0%
!! TCGGTGCTAGATAGAGTATA+AGG + Chr1:98401499-98401518 MsG0180005978.01.T01:intron 40.0%
!! TGAATCCATGGTAGCTTTAG+AGG + Chr1:98399044-98399063 MsG0180005978.01.T01:CDS 40.0%
!!! TGAGAATCCCTTTGTTTTGG+GGG + Chr1:98393587-98393606 MsG0180005978.01.T01:intron 40.0%
!!! TTAACCTCACTTTTTTGCCG+TGG + Chr1:98399885-98399904 MsG0180005978.01.T01:intron 40.0%
AACCGAGCCTCCTATTTCAT+AGG - Chr1:98396814-98396833 None:intergenic 45.0%
AATCTGCCAACCATCAACTC+GGG + Chr1:98399188-98399207 MsG0180005978.01.T01:CDS 45.0%
ACATTCCAAACGACACCGTT+AGG - Chr1:98396977-98396996 None:intergenic 45.0%
ACGCACAAGCCTAACTATAG+AGG + Chr1:98396748-98396767 MsG0180005978.01.T01:intron 45.0%
AGAAAGGGGAGATACCTGAA+TGG + Chr1:98400937-98400956 MsG0180005978.01.T01:CDS 45.0%
AGGATGCTTCATGCTTCCTT+TGG + Chr1:98400992-98401011 MsG0180005978.01.T01:intron 45.0%
AGGCGAGAATCCGTTTCTTA+AGG - Chr1:98399506-98399525 None:intergenic 45.0%
ATAAGGCTTCTCGGCTAAGT+TGG - Chr1:98394482-98394501 None:intergenic 45.0%
ATCCAGGAGATGAGTGATAG+TGG - Chr1:98395558-98395577 None:intergenic 45.0%
CAATCTGCCAACCATCAACT+CGG + Chr1:98399187-98399206 MsG0180005978.01.T01:CDS 45.0%
CCATCTCTTTCTCAGCCAAT+AGG - Chr1:98399023-98399042 None:intergenic 45.0%
CGGAAACGAAGATTCAGACA+TGG + Chr1:98398923-98398942 MsG0180005978.01.T01:intron 45.0%
CGTGACACAGTGAAAACATC+TGG + Chr1:98393446-98393465 MsG0180005978.01.T01:CDS 45.0%
CTTCTGCAGAAGCCTTCTTA+AGG - Chr1:98398367-98398386 None:intergenic 45.0%
CTTGATGAAAGGGATCCTCT+TGG - Chr1:98397727-98397746 None:intergenic 45.0%
CTTGATTCCCTGAACCTTTG+TGG - Chr1:98392685-98392704 None:intergenic 45.0%
GAAACCACGGCAAAAAAGTG+AGG - Chr1:98399892-98399911 None:intergenic 45.0%
GATCTGTACTCACCGTATGA+AGG - Chr1:98398423-98398442 None:intergenic 45.0%
GATGTATTTGTGGGAAGGGA+AGG + Chr1:98401588-98401607 MsG0180005978.01.T01:CDS 45.0%
GATTGGTATGCTCAGCTACA+TGG + Chr1:98393362-98393381 MsG0180005978.01.T01:intron 45.0%
GCAAGACTATAGATCATGGG+GGG - Chr1:98395531-98395550 None:intergenic 45.0%
GCCAGCAAAAGACACATTCA+TGG + Chr1:98394195-98394214 MsG0180005978.01.T01:intron 45.0%
GCTCGAGACTTTGCATGTTA+CGG - Chr1:98399311-98399330 None:intergenic 45.0%
GCTTATCACTGAGAGTGAGA+TGG - Chr1:98397776-98397795 None:intergenic 45.0%
GCTTTGTAAAGCTTACGGAG+TGG + Chr1:98401551-98401570 MsG0180005978.01.T01:CDS 45.0%
GGAAAGATCCTCAAAGGCTT+CGG - Chr1:98392664-98392683 None:intergenic 45.0%
GGATCCCTTTCATCAAGCAT+TGG + Chr1:98397730-98397749 MsG0180005978.01.T01:intron 45.0%
GGATCTTTCCACAAAGGTTC+AGG + Chr1:98392674-98392693 MsG0180005978.01.T01:CDS 45.0%
GGCAGCAAGACTATAGATCA+TGG - Chr1:98395535-98395554 None:intergenic 45.0%
GGGTGTTTGAGAAGAGAGTA+GGG - Chr1:98395182-98395201 None:intergenic 45.0%
GTGATTCTTTCAATGGGGGT+GGG + Chr1:98397054-98397073 MsG0180005978.01.T01:intron 45.0%
GTGTTGAAAAATCTGGGGGA+CGG + Chr1:98399237-98399256 MsG0180005978.01.T01:CDS 45.0%
TCACTCCTAGTCGTAGGAAA+GGG + Chr1:98396996-98397015 MsG0180005978.01.T01:intron 45.0%
TCACTCTCAGTGATAAGCTC+CGG + Chr1:98397778-98397797 MsG0180005978.01.T01:intron 45.0%
TCAGTTTCTCAGCGGCTATT+TGG + Chr1:98394852-98394871 MsG0180005978.01.T01:intron 45.0%
TCCAAGGAGTGGAAAGTAGA+AGG + Chr1:98396057-98396076 MsG0180005978.01.T01:intron 45.0%
TCCAGGAGATGAGTGATAGT+GGG - Chr1:98395557-98395576 None:intergenic 45.0%
TCCTTCTACTTTCCACTCCT+TGG - Chr1:98396061-98396080 None:intergenic 45.0%
TCTACTTTCCACTCCTTGGA+AGG - Chr1:98396057-98396076 None:intergenic 45.0%
TCTAGGTTGCCTCACATGTT+AGG - Chr1:98394392-98394411 None:intergenic 45.0%
TCTCTTAGAGGCTAGTGGAA+TGG + Chr1:98399593-98399612 MsG0180005978.01.T01:CDS 45.0%
TGAAGACAACAATGCGCAGA+CGG + Chr1:98401234-98401253 MsG0180005978.01.T01:intron 45.0%
TGCCTCACATGTTAGGATTG+AGG - Chr1:98394385-98394404 None:intergenic 45.0%
TGTCATCTCTTAGAGGCTAG+TGG + Chr1:98399588-98399607 MsG0180005978.01.T01:CDS 45.0%
TGTGATTCTTTCAATGGGGG+TGG + Chr1:98397053-98397072 MsG0180005978.01.T01:intron 45.0%
TTCTTCAGTTCACGCTGTTC+CGG - Chr1:98400798-98400817 None:intergenic 45.0%
TTGCTTATGCACCAACCAGT+AGG + Chr1:98399731-98399750 MsG0180005978.01.T01:intron 45.0%
TTGTGCACCGTATCACTCAT+GGG + Chr1:98393841-98393860 MsG0180005978.01.T01:CDS 45.0%
TTTGTGCACCGTATCACTCA+TGG + Chr1:98393840-98393859 MsG0180005978.01.T01:CDS 45.0%
! AGGGTGTTTGAGAAGAGAGT+AGG - Chr1:98395183-98395202 None:intergenic 45.0%
! ATAATGGAGCCTAGCACTGT+TGG - Chr1:98396404-98396423 None:intergenic 45.0%
! ATTGGTGTCTTGTCAGACAC+CGG - Chr1:98393095-98393114 None:intergenic 45.0%
! CCTATTGGCTGAGAAAGAGA+TGG + Chr1:98399020-98399039 MsG0180005978.01.T01:intron 45.0%
! CGAGAAGGTATATGTGTGTG+TGG + Chr1:98397863-98397882 MsG0180005978.01.T01:intron 45.0%
! CTTCACATTGAAGGTGTGTC+CGG + Chr1:98393069-98393088 MsG0180005978.01.T01:intron 45.0%
! GGAAGGCGAATCCATCATTT+TGG - Chr1:98396040-98396059 None:intergenic 45.0%
! TATCATGGGCTACTTGCAGT+GGG - Chr1:98399940-98399959 None:intergenic 45.0%
! TTATCATGGGCTACTTGCAG+TGG - Chr1:98399941-98399960 None:intergenic 45.0%
!! AATGATGGATTCGCCTTCCA+AGG + Chr1:98396041-98396060 MsG0180005978.01.T01:intron 45.0%
!! CCCTCCCATTTGTTGGATTT+TGG + Chr1:98395251-98395270 MsG0180005978.01.T01:intron 45.0%
!! CGAAATTTGGCTTTCTTCCG+AGG + Chr1:98398614-98398633 MsG0180005978.01.T01:intron 45.0%
!! GCTGGTTGTTTTCTCGCTTT+TGG + Chr1:98393191-98393210 MsG0180005978.01.T01:intron 45.0%
!! GTGAGCACTGATTGAAGCTT+AGG - Chr1:98399814-98399833 None:intergenic 45.0%
!! TCCATGGTAGCTTTAGAGGA+AGG + Chr1:98399048-98399067 MsG0180005978.01.T01:CDS 45.0%
!! TCCTTCCTCTAAAGCTACCA+TGG - Chr1:98399052-98399071 None:intergenic 45.0%
!! TTAGCAGAAGGGTGTCAACT+CGG + Chr1:98398888-98398907 MsG0180005978.01.T01:intron 45.0%
!!! AGAATCCCTTTGTTTTGGGG+GGG + Chr1:98393589-98393608 MsG0180005978.01.T01:intron 45.0%
!!! GAGAATCCCTTTGTTTTGGG+GGG + Chr1:98393588-98393607 MsG0180005978.01.T01:intron 45.0%
!!! GGCCCATAGTTTTTAGAGCT+CGG + Chr1:98397095-98397114 MsG0180005978.01.T01:intron 45.0%
!!! AATATATGATTATATTTTTT+TGG - Chr1:98395597-98395616 None:intergenic 5.0%
AATCTACGCAGAGTTCGCCA+GGG + Chr1:98393482-98393501 MsG0180005978.01.T01:CDS 50.0%
ACTCATCTCCTGGATGTCTC+AGG + Chr1:98395563-98395582 MsG0180005978.01.T01:intron 50.0%
AGAAGTAGCGTATGAGCACG+AGG - Chr1:98399264-98399283 None:intergenic 50.0%
AGCTTGAGCGTGGTATGACT+TGG + Chr1:98400344-98400363 MsG0180005978.01.T01:intron 50.0%
AGTCTCGAGCCGACAACTTA+TGG + Chr1:98399321-98399340 MsG0180005978.01.T01:CDS 50.0%
ATCCTCAAAGGCTTCGGCAA+TGG - Chr1:98392658-98392677 None:intergenic 50.0%
ATCTCGCAGCATGAACGAGA+AGG + Chr1:98397848-98397867 MsG0180005978.01.T01:CDS 50.0%
ATCTGCCAACCATCAACTCG+GGG + Chr1:98399189-98399208 MsG0180005978.01.T01:CDS 50.0%
ATCTTCGTTTCCGGTCACCA+AGG - Chr1:98398916-98398935 None:intergenic 50.0%
ATTCTCAGTGACAGCTGACC+TGG - Chr1:98400600-98400619 None:intergenic 50.0%
CACTCCTAGTCGTAGGAAAG+GGG + Chr1:98396997-98397016 MsG0180005978.01.T01:intron 50.0%
CACTCTCAGTGATAAGCTCC+GGG + Chr1:98397779-98397798 MsG0180005978.01.T01:intron 50.0%
CAGCGGAGAAGAAGATGAGA+AGG + Chr1:98394664-98394683 MsG0180005978.01.T01:CDS 50.0%
CAGGGCCGTTCCTATGAAAT+AGG + Chr1:98396801-98396820 MsG0180005978.01.T01:intron 50.0%
CGTAGGAAAGGGGAAACGAA+TGG + Chr1:98397007-98397026 MsG0180005978.01.T01:intron 50.0%
CTCATCTCCTGGATGTCTCA+GGG + Chr1:98395564-98395583 MsG0180005978.01.T01:intron 50.0%
CTCCAGAGCAAACTCAACTG+AGG - Chr1:98398665-98398684 None:intergenic 50.0%
CTCGTTCATGCTGCGAGATT+TGG - Chr1:98397847-98397866 None:intergenic 50.0%
CTCTAACGAGATCAAGACCC+TGG - Chr1:98393502-98393521 None:intergenic 50.0%
CTGACTCCCCATGAGTGATA+CGG - Chr1:98393851-98393870 None:intergenic 50.0%
CTTGGGTTCAAGCCCTATGA+AGG - Chr1:98401363-98401382 None:intergenic 50.0%
GAAGTGGCGTCAACAGCTTA+TGG + Chr1:98393812-98393831 MsG0180005978.01.T01:CDS 50.0%
GACTATAGATCATGGGGGGT+TGG - Chr1:98395527-98395546 None:intergenic 50.0%
GATCCTCTTGGAGTCGTGAA+AGG - Chr1:98397715-98397734 None:intergenic 50.0%
GATGCTAAGCCAACAGTGCT+AGG + Chr1:98396392-98396411 MsG0180005978.01.T01:intron 50.0%
GCGAGATTTGGAAGCAACGT+AGG - Chr1:98397835-98397854 None:intergenic 50.0%
GCTTCGGCAATGGAAGAAAG+AGG - Chr1:98392648-98392667 None:intergenic 50.0%
GCTTTAGCGCTGCTGATGAT+TGG + Chr1:98399704-98399723 MsG0180005978.01.T01:intron 50.0%
GGAATGTCACTCCTAGTCGT+AGG + Chr1:98396990-98397009 MsG0180005978.01.T01:intron 50.0%
GGCCGTTCCTATGAAATAGG+AGG + Chr1:98396804-98396823 MsG0180005978.01.T01:intron 50.0%
GGGAACGGAGATTCGATCAA+CGG + Chr1:98399209-98399228 MsG0180005978.01.T01:CDS 50.0%
GGTGAAGTCCTTCTAGTGCA+AGG - Chr1:98400536-98400555 None:intergenic 50.0%
GTATGCTCAGCTACATGGAC+TGG + Chr1:98393367-98393386 MsG0180005978.01.T01:intron 50.0%
GTCACTCCTAGTCGTAGGAA+AGG + Chr1:98396995-98397014 MsG0180005978.01.T01:intron 50.0%
GTGCCCAACACCAACTTATG+TGG - Chr1:98401438-98401457 None:intergenic 50.0%
GTTTCCCCTTTCCTACGACT+AGG - Chr1:98397004-98397023 None:intergenic 50.0%
TAATCTACGCAGAGTTCGCC+AGG + Chr1:98393481-98393500 MsG0180005978.01.T01:CDS 50.0%
TCACCTTTCACGACTCCAAG+AGG + Chr1:98397709-98397728 MsG0180005978.01.T01:intron 50.0%
TCACTCATGGGGAGTCAGAA+CGG + Chr1:98393853-98393872 MsG0180005978.01.T01:CDS 50.0%
TCATCTCCTGGATGTCTCAG+GGG + Chr1:98395565-98395584 MsG0180005978.01.T01:intron 50.0%
TGTAAAGCTTACGGAGTGGC+AGG + Chr1:98401555-98401574 MsG0180005978.01.T01:CDS 50.0%
TGTGCACCGTATCACTCATG+GGG + Chr1:98393842-98393861 MsG0180005978.01.T01:CDS 50.0%
TTCCATTGCCGAAGCCTTTG+AGG + Chr1:98392653-98392672 MsG0180005978.01.T01:CDS 50.0%
TTGGAAGCAACGTAGGCACT+GGG - Chr1:98397828-98397847 None:intergenic 50.0%
TTTGGAAGCAACGTAGGCAC+TGG - Chr1:98397829-98397848 None:intergenic 50.0%
! CAAAAATAGGGGGCGCGATA+AGG + Chr1:98395278-98395297 MsG0180005978.01.T01:intron 50.0%
! CCAGGAGATGAGTGATAGTG+GGG - Chr1:98395556-98395575 None:intergenic 50.0%
! CTTATCGCGCCCCCTATTTT+TGG - Chr1:98395280-98395299 None:intergenic 50.0%
! TGCCTCAGTTGAGTTTGCTC+TGG + Chr1:98398660-98398679 MsG0180005978.01.T01:intron 50.0%
! TTGGATGGCCTTGCACTAGA+AGG + Chr1:98400525-98400544 MsG0180005978.01.T01:CDS 50.0%
!! AACGTAGGCACTGGGATCAA+AGG - Chr1:98397820-98397839 None:intergenic 50.0%
!! GCACTGATTGAAGCTTAGGC+TGG - Chr1:98399810-98399829 None:intergenic 50.0%
!! GCACTGTTGGCTTAGCATCT+TGG - Chr1:98396391-98396410 None:intergenic 50.0%
ACCTCCTGATGCAGCTATCG+AGG - Chr1:98399526-98399545 None:intergenic 55.0%
ATATGTGTGTGTGGGCGCGT+GGG + Chr1:98397872-98397891 MsG0180005978.01.T01:intron 55.0%
CCAACCATCAACTCGGGGAA+CGG + Chr1:98399194-98399213 MsG0180005978.01.T01:CDS 55.0%
CCACACCCCCCCAAAACAAA+GGG - Chr1:98393597-98393616 None:intergenic 55.0%
CCCCACTATCACTCATCTCC+TGG + Chr1:98395553-98395572 MsG0180005978.01.T01:intron 55.0%
CGTGTACAAGGAGGGGGAAA+TGG - Chr1:98395504-98395523 None:intergenic 55.0%
CTCGAGCCGACAACTTATGG+AGG + Chr1:98399324-98399343 MsG0180005978.01.T01:CDS 55.0%
CTTCTTGCACTCCCAAGGTC+CGG + Chr1:98397128-98397147 MsG0180005978.01.T01:intron 55.0%
GAGGCAGTGATGTGCTCCAT+TGG + Chr1:98394774-98394793 MsG0180005978.01.T01:intron 55.0%
GGCGTCAACAGCTTATGGAG+AGG + Chr1:98393817-98393836 MsG0180005978.01.T01:CDS 55.0%
GTCAGAACGGCTGTGTATGC+TGG + Chr1:98393866-98393885 MsG0180005978.01.T01:CDS 55.0%
TAACTTCAGGGCCGGACCTT+GGG - Chr1:98397142-98397161 None:intergenic 55.0%
TAGCGCTTCTTGCACTCCCA+AGG + Chr1:98397123-98397142 MsG0180005978.01.T01:intron 55.0%
TATATGTGTGTGTGGGCGCG+TGG + Chr1:98397871-98397890 MsG0180005978.01.T01:intron 55.0%
TCAGACGATCAACTTCGCGC+TGG - Chr1:98400827-98400846 None:intergenic 55.0%
TGGATTCGCCTTCCAAGGAG+TGG + Chr1:98396046-98396065 MsG0180005978.01.T01:intron 55.0%
TTCAGTTCACGCTGTTCCGG+AGG - Chr1:98400795-98400814 None:intergenic 55.0%
! ACATTGAAGGTGTGTCCGGC+CGG + Chr1:98393073-98393092 MsG0180005978.01.T01:intron 55.0%
! AGGGTGTCAACTCGGTTCCT+TGG + Chr1:98398896-98398915 MsG0180005978.01.T01:intron 55.0%
! ATCTCCGTTCCCCGAGTTGA+TGG - Chr1:98399201-98399220 None:intergenic 55.0%
! CAACTCGGTTCCTTGGTGAC+CGG + Chr1:98398903-98398922 MsG0180005978.01.T01:intron 55.0%
! CGAAGGGTACGACAAAAGCC+AGG - Chr1:98395120-98395139 None:intergenic 55.0%
! GGACTGGTGAGTTCTAGCAG+AGG + Chr1:98394755-98394774 MsG0180005978.01.T01:intron 55.0%
!! GCATGCATTGGTGTCGGACA+TGG + Chr1:98401196-98401215 MsG0180005978.01.T01:intron 55.0%
!! TGCTCAGCTACATGGACTGG+TGG + Chr1:98393370-98393389 MsG0180005978.01.T01:intron 55.0%
!!! CCTTTGTTTTGGGGGGGTGT+GGG + Chr1:98393595-98393614 MsG0180005978.01.T01:intron 55.0%
AGGAGGGGGAAATGGAGCAG+AGG - Chr1:98395496-98395515 None:intergenic 60.0%
AGGGGGAAATGGAGCAGAGG+AGG - Chr1:98395493-98395512 None:intergenic 60.0%
CCCACACCCCCCCAAAACAA+AGG - Chr1:98393598-98393617 None:intergenic 60.0%
CTCGCCTCGATAGCTGCATC+AGG + Chr1:98399519-98399538 MsG0180005978.01.T01:CDS 60.0%
CTGTGTCACGGGCCACATCA+TGG - Chr1:98393436-98393455 None:intergenic 60.0%
GCCTCGATAGCTGCATCAGG+AGG + Chr1:98399522-98399541 MsG0180005978.01.T01:CDS 60.0%
GGGGGAAATGGAGCAGAGGA+GGG - Chr1:98395492-98395511 None:intergenic 60.0%
GGTTGGCGTGTACAAGGAGG+GGG - Chr1:98395510-98395529 None:intergenic 60.0%
GTAACTTCAGGGCCGGACCT+TGG - Chr1:98397143-98397162 None:intergenic 60.0%
GTGTCTTGTCAGACACCGGC+CGG - Chr1:98393091-98393110 None:intergenic 60.0%
! AGGGGGCGCGATAAGGTTGA+AGG + Chr1:98395285-98395304 MsG0180005978.01.T01:intron 60.0%
! ATGGGGGGTTGGCGTGTACA+AGG - Chr1:98395516-98395535 None:intergenic 60.0%
! GGGGGCGCGATAAGGTTGAA+GGG + Chr1:98395286-98395305 MsG0180005978.01.T01:intron 60.0%
! GGGGTTGGCGTGTACAAGGA+GGG - Chr1:98395512-98395531 None:intergenic 60.0%
! GGGTTGGCGTGTACAAGGAG+GGG - Chr1:98395511-98395530 None:intergenic 60.0%
!! CCGTTCCCCGAGTTGATGGT+TGG - Chr1:98399197-98399216 None:intergenic 60.0%
!!! CCCTTTGTTTTGGGGGGGTG+TGG + Chr1:98393594-98393613 MsG0180005978.01.T01:intron 60.0%
CTGGCACCCCTGAGACATCC+AGG - Chr1:98395574-98395593 None:intergenic 65.0%
! GGGGGTTGGCGTGTACAAGG+AGG - Chr1:98395513-98395532 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr1 gene 98392615 98401629 98392615 ID=MsG0180005978.01;Name=MsG0180005978.01
Chr1 mRNA 98392615 98401629 98392615 ID=MsG0180005978.01.T01;Parent=MsG0180005978.01;Name=MsG0180005978.01.T01;_AED=0.40;_eAED=0.40;_QI=0|0|0|1|1|1|11|0|691
Chr1 exon 98392615 98392827 98392615 ID=MsG0180005978.01.T01:exon:10926;Parent=MsG0180005978.01.T01
Chr1 exon 98393377 98393549 98393377 ID=MsG0180005978.01.T01:exon:10927;Parent=MsG0180005978.01.T01
Chr1 exon 98393796 98393941 98393796 ID=MsG0180005978.01.T01:exon:10928;Parent=MsG0180005978.01.T01
Chr1 exon 98394658 98394760 98394658 ID=MsG0180005978.01.T01:exon:10929;Parent=MsG0180005978.01.T01
Chr1 exon 98397788 98397869 98397788 ID=MsG0180005978.01.T01:exon:10930;Parent=MsG0180005978.01.T01
Chr1 exon 98398332 98398429 98398332 ID=MsG0180005978.01.T01:exon:10931;Parent=MsG0180005978.01.T01
Chr1 exon 98398804 98398879 98398804 ID=MsG0180005978.01.T01:exon:10932;Parent=MsG0180005978.01.T01
Chr1 exon 98399033 98399695 98399033 ID=MsG0180005978.01.T01:exon:10933;Parent=MsG0180005978.01.T01
Chr1 exon 98400486 98400607 98400486 ID=MsG0180005978.01.T01:exon:10934;Parent=MsG0180005978.01.T01
Chr1 exon 98400662 98400980 98400662 ID=MsG0180005978.01.T01:exon:10935;Parent=MsG0180005978.01.T01
Chr1 exon 98401549 98401629 98401549 ID=MsG0180005978.01.T01:exon:10936;Parent=MsG0180005978.01.T01
Chr1 CDS 98392615 98392827 98392615 ID=MsG0180005978.01.T01:cds;Parent=MsG0180005978.01.T01
Chr1 CDS 98393377 98393549 98393377 ID=MsG0180005978.01.T01:cds;Parent=MsG0180005978.01.T01
Chr1 CDS 98393796 98393941 98393796 ID=MsG0180005978.01.T01:cds;Parent=MsG0180005978.01.T01
Chr1 CDS 98394658 98394760 98394658 ID=MsG0180005978.01.T01:cds;Parent=MsG0180005978.01.T01
Chr1 CDS 98397788 98397869 98397788 ID=MsG0180005978.01.T01:cds;Parent=MsG0180005978.01.T01
Chr1 CDS 98398332 98398429 98398332 ID=MsG0180005978.01.T01:cds;Parent=MsG0180005978.01.T01
Chr1 CDS 98398804 98398879 98398804 ID=MsG0180005978.01.T01:cds;Parent=MsG0180005978.01.T01
Chr1 CDS 98399033 98399695 98399033 ID=MsG0180005978.01.T01:cds;Parent=MsG0180005978.01.T01
Chr1 CDS 98400486 98400607 98400486 ID=MsG0180005978.01.T01:cds;Parent=MsG0180005978.01.T01
Chr1 CDS 98400662 98400980 98400662 ID=MsG0180005978.01.T01:cds;Parent=MsG0180005978.01.T01
Chr1 CDS 98401549 98401629 98401549 ID=MsG0180005978.01.T01:cds;Parent=MsG0180005978.01.T01
Gene Sequence

>MsG0180005978.01.T01

ATGGATCATTCCGATTTAGCGATTGCGTATCCTCTTTCTTCCATTGCCGAAGCCTTTGAGGATCTTTCCACAAAGGTTCAGGGAATCAAGAACGGTTCCTCCACTCAACATATTCGCTTAGACTCTTTCTGTGAAATTGCTTCTCTTGTTTCTGTTCTTTTTCGTTGTCTTGGTCTTGCTTTCAAATTCGCTGAAATGGAATACGTTGCCAAGCTACATGGACTGGTGGAAGCATCAAAGAAGTATCAGACTCTACAAGATGTAATTGACCATGATGTGGCCCGTGACACAGTGAAAACATCTGGAAGCTATTCACGTAATCTACGCAGAGTTCGCCAGGGTCTTGATCTCGTTAGAGCTATATTCGAACAACTTTTGTCAACTAGTGATATTTATCTGAAAGAAGTGGCGTCAACAGCTTATGGAGAGGTTTGTGCACCGTATCACTCATGGGGAGTCAGAACGGCTGTGTATGCTGGAATGTATACACTTCCAACAAGAGACCAACTTTTTGTAAAGCTCAATGAAACAGAGCAATCAGCGGAGAAGAAGATGAGAAGGTACATTACTGCCTCACGTCCAGTTATAGAATACATTGATAAACTGTACCTTTCTCGAAATATTTCATTGGACTGTGATAAGCTCCGGGTTTTCAAAAGTTCTACCTTTGATCCCAGTGCCTACGTTGCTTCCAAATCTCGCAGCATGAACGAGAAGGAGATAAGACATTTGTGTGCTTATCTTGTTGACCTTAAGAAGGCTTCTGCAGAAGAAATGCGCAAAAGTGTTCTTGCTAATTACTCTTCCTTCATACGTACATCCAAAGAGATTTCAGATCTTGAGGGAGAGCTTCTTTCCATGAGAAACCTTTTATCTAACCAAGCTGCATTGAAAGAGATGGATGAATCCATGGTAGCTTTAGAGGAAGGAGAAAAAATGGCTAAAGAAATTAAACAAGGGAAAACTTTAAGTTCGAGTTTATTTCAAGCACTTCAAAATGCCATTACTGAACACAGACAAAAACTAGCCGATCAACTAGCAGAAACAATCTGCCAACCATCAACTCGGGGAACGGAGATTCGATCAACGGCATTAGTGTTGAAAAATCTGGGGGACGGTCCTCGTGCTCATACGCTACTTCTTAAATCACACAAAGAAAAGTTGAACCGTAACATGCAAAGTCTCGAGCCGACAACTTATGGAGGAATTAGTGCATACACTGCATCAATTTCACACCTTGTTTTTTCAACCATTTCACAAGCAGTATCAGATTCTTTGACAGTTTTTGCTGGTGAAGAACCTGCATATACTTCTGAGCTAGTAACTTGGGCAGTAAGACAAGCCGAAACTTTTTCGCTTCTCCTTAAGAAACGGATTCTCGCCTCGATAGCTGCATCAGGAGGTCTTAGAATTGCATCTGAATGTGTTCATGTTTGCCTTAGTCACTGTCATCTCTTAGAGGCTAGTGGAATGGCACTTTCACCTGTGTTACTTAAACATTTTAGACCATTTGTTGAGCAAGCACTTAACACAAATTTGAAAGAATTGAACAAAGAGCTTTTTGAAGACGTAGGGACACTTGAAATCTTACAATTGGATGGCCTTGCACTAGAAGGACTTCACCAAGTGTTTAATTTCTATGTCAAGCTGTTGATAAATGCAATGCCAGGTCAGCTAAACACAACAGATAGCATGCTAGCTAATGCAATATTGCTAGCAGATGAGCTGCTACCGCGTGCTGTAATCAAACTTTCACATAGCACAAAAGGTGACGACTCTCATAAAAGAGTATCAGATAAACAAAGACCTCCGGAACAGCGTGAACTGAAGAAAAGACTCCAGCGCGAAGTTGATCGTCTGAGAGACAGTTTCTGCAGACAGCATGCCCTTGAACTGATCTCACAGAAGATGAATCCCACTTTTGAATGCTCAATTATTTTGGATATGGAGGAGAAAGGGGAGATACCTGAATGGTTTCCTTCTCCAATTTTTCAGGAGCTTTGTAAAGCTTACGGAGTGGCAGGCATTGCATCAGATGTATTTGTGGGAAGGGAAGGTTTGCAACTATTTTATTGA
Protein sequence

>MsG0180005978.01.T01

MDHSDLAIAYPLSSIAEAFEDLSTKVQGIKNGSSTQHIRLDSFCEIASLVSVLFRCLGLAFKFAEMEYVAKLHGLVEASKKYQTLQDVIDHDVARDTVKTSGSYSRNLRRVRQGLDLVRAIFEQLLSTSDIYLKEVASTAYGEVCAPYHSWGVRTAVYAGMYTLPTRDQLFVKLNETEQSAEKKMRRYITASRPVIEYIDKLYLSRNISLDCDKLRVFKSSTFDPSAYVASKSRSMNEKEIRHLCAYLVDLKKASAEEMRKSVLANYSSFIRTSKEISDLEGELLSMRNLLSNQAALKEMDESMVALEEGEKMAKEIKQGKTLSSSLFQALQNAITEHRQKLADQLAETICQPSTRGTEIRSTALVLKNLGDGPRAHTLLLKSHKEKLNRNMQSLEPTTYGGISAYTASISHLVFSTISQAVSDSLTVFAGEEPAYTSELVTWAVRQAETFSLLLKKRILASIAASGGLRIASECVHVCLSHCHLLEASGMALSPVLLKHFRPFVEQALNTNLKELNKELFEDVGTLEILQLDGLALEGLHQVFNFYVKLLINAMPGQLNTTDSMLANAILLADELLPRAVIKLSHSTKGDDSHKRVSDKQRPPEQRELKKRLQREVDRLRDSFCRQHALELISQKMNPTFECSIILDMEEKGEIPEWFPSPIFQELCKAYGVAGIASDVFVGREGLQLFY*