Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005776.01.T01 | KEH44036.1 | 98.585 | 212 | 3 | 0 | 1 | 212 | 1 | 212 | 1.22E-150 | 430 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005776.01.T01 | O81760 | 69.953 | 213 | 63 | 1 | 1 | 212 | 1 | 213 | 2.46E-103 | 306 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005776.01.T01 | A0A072VQT7 | 98.585 | 212 | 3 | 0 | 1 | 212 | 1 | 212 | 5.85e-151 | 430 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180005776.01 | MsG0180005978.01 | 0.801196 | 1.009213e-48 | 4.790264e-46 |
| MsG0180005776.01 | MsG0280006950.01 | 0.880593 | 4.829308e-70 | 2.739383e-66 |
| MsG0180005776.01 | MsG0280011349.01 | 0.811782 | 5.894229e-51 | 3.681781e-48 |
| MsG0180005776.01 | MsG0380015506.01 | 0.813615 | 2.339558e-51 | 1.535241e-48 |
| MsG0180005776.01 | MsG0380016257.01 | 0.854887 | 9.125517e-62 | 2.068408e-58 |
| MsG0180005776.01 | MsG0480020857.01 | 0.876237 | 1.638094e-68 | 7.881365e-65 |
| MsG0180005776.01 | MsG0680035849.01 | 0.821544 | 3.816730e-53 | 3.114373e-50 |
| MsG0180005776.01 | MsG0780041761.01 | 0.841069 | 5.941094e-58 | 8.628750e-55 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005776.01.T01 | MTR_1g106855 | 98.585 | 212 | 3 | 0 | 1 | 212 | 1 | 212 | 1.48e-154 | 430 |
| MsG0180005776.01.T01 | MTR_1g106855 | 98.585 | 212 | 3 | 0 | 1 | 212 | 1 | 212 | 2.07e-154 | 433 |
| MsG0180005776.01.T01 | MTR_1g112840 | 52.889 | 225 | 91 | 3 | 1 | 212 | 8 | 230 | 2.83e-75 | 232 |
| MsG0180005776.01.T01 | MTR_1g116260 | 56.373 | 204 | 79 | 2 | 17 | 212 | 28 | 229 | 5.20e-73 | 226 |
| MsG0180005776.01.T01 | MTR_7g081020 | 49.339 | 227 | 93 | 3 | 6 | 212 | 1 | 225 | 2.13e-69 | 215 |
| MsG0180005776.01.T01 | MTR_7g081020 | 49.339 | 227 | 93 | 3 | 6 | 212 | 1 | 225 | 1.34e-68 | 215 |
| MsG0180005776.01.T01 | MTR_8g074930 | 52.451 | 204 | 87 | 2 | 17 | 212 | 27 | 228 | 3.08e-68 | 214 |
| MsG0180005776.01.T01 | MTR_0015s0140 | 52.308 | 195 | 90 | 1 | 18 | 212 | 36 | 227 | 1.63e-67 | 212 |
| MsG0180005776.01.T01 | MTR_7g100240 | 52.195 | 205 | 88 | 2 | 16 | 212 | 18 | 220 | 1.26e-64 | 204 |
| MsG0180005776.01.T01 | MTR_1g067210 | 52.736 | 201 | 85 | 2 | 20 | 212 | 27 | 225 | 2.48e-63 | 201 |
| MsG0180005776.01.T01 | MTR_2g033910 | 49.495 | 198 | 97 | 2 | 16 | 212 | 30 | 225 | 3.18e-61 | 196 |
| MsG0180005776.01.T01 | MTR_3g032660 | 45.213 | 188 | 97 | 3 | 27 | 212 | 33 | 216 | 5.71e-51 | 171 |
| MsG0180005776.01.T01 | MTR_3g032700 | 45.213 | 188 | 97 | 3 | 27 | 212 | 33 | 216 | 7.94e-51 | 170 |
| MsG0180005776.01.T01 | MTR_7g090550 | 44.681 | 188 | 98 | 3 | 27 | 212 | 35 | 218 | 1.48e-45 | 156 |
| MsG0180005776.01.T01 | MTR_7g090530 | 44.681 | 188 | 98 | 3 | 27 | 212 | 34 | 217 | 5.67e-45 | 155 |
| MsG0180005776.01.T01 | MTR_0015s0140 | 49.612 | 129 | 62 | 1 | 84 | 212 | 48 | 173 | 2.19e-37 | 133 |
| MsG0180005776.01.T01 | MTR_8g074930 | 54.237 | 118 | 52 | 1 | 95 | 212 | 1 | 116 | 2.45e-37 | 131 |
| MsG0180005776.01.T01 | MTR_4g113480 | 36.410 | 195 | 117 | 3 | 20 | 212 | 34 | 223 | 2.63e-31 | 120 |
| MsG0180005776.01.T01 | MTR_3g032590 | 42.188 | 128 | 69 | 2 | 86 | 212 | 99 | 222 | 3.22e-28 | 110 |
| MsG0180005776.01.T01 | MTR_4g113210 | 32.642 | 193 | 105 | 4 | 20 | 207 | 16 | 188 | 1.97e-26 | 102 |
| MsG0180005776.01.T01 | MTR_4g113345 | 32.184 | 174 | 108 | 5 | 23 | 192 | 22 | 189 | 3.76e-23 | 95.5 |
| MsG0180005776.01.T01 | MTR_7g060770 | 30.357 | 168 | 89 | 8 | 61 | 212 | 263 | 418 | 6.39e-14 | 70.5 |
| MsG0180005776.01.T01 | MTR_4g119830 | 34.746 | 118 | 70 | 3 | 98 | 212 | 246 | 359 | 1.06e-13 | 69.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005776.01.T01 | AT4G33920 | 69.953 | 213 | 63 | 1 | 1 | 212 | 1 | 213 | 2.51e-104 | 306 |
| MsG0180005776.01.T01 | AT3G51370 | 53.922 | 204 | 84 | 2 | 17 | 212 | 27 | 228 | 2.81e-73 | 227 |
| MsG0180005776.01.T01 | AT3G51370 | 53.922 | 204 | 84 | 2 | 17 | 212 | 27 | 228 | 2.81e-73 | 227 |
| MsG0180005776.01.T01 | AT5G66080 | 54.369 | 206 | 83 | 2 | 16 | 212 | 28 | 231 | 2.65e-71 | 222 |
| MsG0180005776.01.T01 | AT3G12620 | 56.863 | 204 | 78 | 3 | 17 | 212 | 31 | 232 | 7.41e-71 | 221 |
| MsG0180005776.01.T01 | AT3G12620 | 56.863 | 204 | 78 | 3 | 17 | 212 | 31 | 232 | 7.41e-71 | 221 |
| MsG0180005776.01.T01 | AT3G55050 | 54.902 | 204 | 82 | 2 | 17 | 212 | 32 | 233 | 3.04e-70 | 219 |
| MsG0180005776.01.T01 | AT3G55050 | 54.902 | 204 | 82 | 2 | 17 | 212 | 32 | 233 | 3.04e-70 | 219 |
| MsG0180005776.01.T01 | AT5G06750 | 55.208 | 192 | 85 | 1 | 22 | 212 | 43 | 234 | 5.21e-68 | 214 |
| MsG0180005776.01.T01 | AT5G06750 | 55.208 | 192 | 85 | 1 | 22 | 212 | 43 | 234 | 5.21e-68 | 214 |
| MsG0180005776.01.T01 | AT4G38520 | 51.961 | 204 | 88 | 2 | 17 | 212 | 29 | 230 | 9.86e-65 | 205 |
| MsG0180005776.01.T01 | AT4G38520 | 51.961 | 204 | 88 | 2 | 17 | 212 | 29 | 230 | 9.86e-65 | 205 |
| MsG0180005776.01.T01 | AT5G02760 | 50.249 | 201 | 88 | 2 | 20 | 212 | 23 | 219 | 3.20e-64 | 203 |
| MsG0180005776.01.T01 | AT3G17090 | 51.562 | 192 | 89 | 2 | 22 | 212 | 45 | 233 | 7.52e-63 | 198 |
| MsG0180005776.01.T01 | AT3G17090 | 51.562 | 192 | 89 | 2 | 22 | 212 | 45 | 233 | 4.71e-62 | 198 |
| MsG0180005776.01.T01 | AT4G33920 | 68.217 | 129 | 40 | 1 | 85 | 212 | 2 | 130 | 2.19e-54 | 176 |
| MsG0180005776.01.T01 | AT3G51370 | 55.200 | 125 | 54 | 1 | 88 | 212 | 21 | 143 | 1.53e-42 | 145 |
| MsG0180005776.01.T01 | AT4G33920 | 70.000 | 100 | 29 | 1 | 114 | 212 | 1 | 100 | 8.04e-41 | 140 |
| MsG0180005776.01.T01 | AT5G66080 | 54.400 | 125 | 55 | 1 | 88 | 212 | 5 | 127 | 1.44e-40 | 140 |
| MsG0180005776.01.T01 | AT5G06750 | 53.600 | 125 | 57 | 1 | 89 | 212 | 28 | 152 | 2.62e-37 | 132 |
| MsG0180005776.01.T01 | AT1G67820 | 32.484 | 157 | 78 | 5 | 60 | 212 | 114 | 246 | 1.07e-14 | 72.4 |
| MsG0180005776.01.T01 | AT1G67820 | 32.484 | 157 | 78 | 5 | 60 | 212 | 150 | 282 | 1.27e-14 | 72.4 |
| MsG0180005776.01.T01 | AT3G16560 | 37.391 | 115 | 65 | 2 | 98 | 212 | 245 | 352 | 1.95e-14 | 71.6 |
| MsG0180005776.01.T01 | AT3G16560 | 37.391 | 115 | 65 | 2 | 98 | 212 | 245 | 352 | 2.21e-14 | 71.6 |
| MsG0180005776.01.T01 | AT3G16560 | 37.391 | 115 | 65 | 2 | 98 | 212 | 245 | 352 | 2.21e-14 | 71.6 |
| MsG0180005776.01.T01 | AT3G16560 | 37.391 | 115 | 65 | 2 | 98 | 212 | 245 | 352 | 2.21e-14 | 71.6 |
| MsG0180005776.01.T01 | AT1G43900 | 31.613 | 155 | 80 | 7 | 61 | 212 | 154 | 285 | 1.32e-11 | 63.2 |
Find 127 sgRNAs with CRISPR-Local
Find 180 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCATAAGCTGACCTTATTT+TGG | 0.149456 | 1:+96048741 | MsG0180005776.01.T01:three_prime_UTR |
| GTGGGATCATGTTGTCTTCT+TGG | 0.195703 | 1:+96047509 | MsG0180005776.01.T01:CDS |
| AGATACTGACTGTGTAAATA+AGG | 0.264924 | 1:-96046901 | None:intergenic |
| TTGGTAAGTTAAGAGAATTC+TGG | 0.274260 | 1:+96048796 | MsG0180005776.01.T01:three_prime_UTR |
| ACTAGTAAGAGCTGCTCTTC+AGG | 0.291775 | 1:+96048464 | MsG0180005776.01.T01:three_prime_UTR |
| GATGGTTCAGCTGTCATTAC+TGG | 0.293354 | 1:-96048216 | None:intergenic |
| CTGAACCATCAATCATCATT+AGG | 0.315695 | 1:+96048229 | MsG0180005776.01.T01:three_prime_UTR |
| TTGCCTCGCTTATCAGTTAG+AGG | 0.327738 | 1:+96048009 | MsG0180005776.01.T01:three_prime_UTR |
| GACGCAATCTGAGGACTAAT+TGG | 0.330240 | 1:-96047485 | None:intergenic |
| GGTGACTCTAGAGTTGTTCT+TGG | 0.332422 | 1:+96047569 | MsG0180005776.01.T01:CDS |
| TATAGATGATGATGGTGATT+AGG | 0.354348 | 1:-96046579 | None:intergenic |
| TATTTGCATCAGATGGCCTT+TGG | 0.354565 | 1:+96048280 | MsG0180005776.01.T01:three_prime_UTR |
| TTAATTGATTAGTCCTTGTA+TGG | 0.354606 | 1:+96048982 | MsG0180005776.01.T01:three_prime_UTR |
| GCTACCCTTACCCCATTTAT+CGG | 0.359051 | 1:-96048066 | None:intergenic |
| TTGACAAATCTAGAAGCTTC+AGG | 0.361584 | 1:-96046865 | None:intergenic |
| GCTAATGTTCGTGAATGATA+TGG | 0.363428 | 1:+96049012 | MsG0180005776.01.T01:three_prime_UTR |
| TTTAGAGAAAATATATCAAC+AGG | 0.367089 | 1:-96048654 | None:intergenic |
| TGAAATGAAATGAAAAGAAA+TGG | 0.372964 | 1:-96046541 | None:intergenic |
| AAACAAAAGAGAAGAAGGAA+AGG | 0.384883 | 1:+96046453 | MsG0180005776.01.T01:five_prime_UTR |
| ATTTGCATCAGATGGCCTTT+GGG | 0.407098 | 1:+96048281 | MsG0180005776.01.T01:three_prime_UTR |
| ACTGGACGCTTCAAAGGAAT+AGG | 0.409207 | 1:-96048198 | None:intergenic |
| TGGGTGAATGCCGCGTTTAG+AGG | 0.409840 | 1:-96046509 | None:intergenic |
| ATGGGATCTCTGTAGAAATC+TGG | 0.417500 | 1:-96048156 | None:intergenic |
| ACCACAATGTGTGAATCATC+AGG | 0.421762 | 1:-96047698 | None:intergenic |
| AGCTCCCTAATGATGATTGA+TGG | 0.423360 | 1:-96048234 | None:intergenic |
| TGGTTTATAGCCGTGGTGTT+TGG | 0.426614 | 1:+96047717 | MsG0180005776.01.T01:CDS |
| TGAACCATCAATCATCATTA+GGG | 0.429934 | 1:+96048230 | MsG0180005776.01.T01:three_prime_UTR |
| GAATGATATGGTACGAGGTA+AGG | 0.432229 | 1:+96049024 | MsG0180005776.01.T01:three_prime_UTR |
| CATAAGATACTCACAGCTCT+TGG | 0.439024 | 1:-96048348 | None:intergenic |
| TTCTTAATATTTGCATCAGA+TGG | 0.445890 | 1:+96048273 | MsG0180005776.01.T01:three_prime_UTR |
| AATCGAAGGGTTCGAAATTG+AGG | 0.446755 | 1:-96046614 | None:intergenic |
| TAAGTGAAGATGAATATTGT+TGG | 0.457861 | 1:+96048777 | MsG0180005776.01.T01:three_prime_UTR |
| TTTCTCAATTGCCGTTGCTC+AGG | 0.469493 | 1:+96046759 | MsG0180005776.01.T01:CDS |
| TTGCAGGTGTCTAGATCTAT+TGG | 0.477815 | 1:+96048114 | MsG0180005776.01.T01:three_prime_UTR |
| GATACTGACTGTGTAAATAA+GGG | 0.479550 | 1:-96046900 | None:intergenic |
| AAGAGCATGCTTGGTTCAGT+TGG | 0.486918 | 1:+96048693 | MsG0180005776.01.T01:three_prime_UTR |
| GAATCTGAGAAGAGCATGCT+TGG | 0.489881 | 1:+96048684 | MsG0180005776.01.T01:three_prime_UTR |
| AGCAGCTCTTACTAGTCTCT+TGG | 0.490227 | 1:-96048457 | None:intergenic |
| AGGGAACATATCTTTGATTG+AGG | 0.491568 | 1:+96046473 | MsG0180005776.01.T01:five_prime_UTR |
| TGTGTTGTATGTTGCCAACC+TGG | 0.492259 | 1:+96047547 | MsG0180005776.01.T01:CDS |
| AACAAAAGAGAAGAAGGAAA+GGG | 0.493048 | 1:+96046454 | MsG0180005776.01.T01:five_prime_UTR |
| GACTTGAAACCTCACGCCTC+CGG | 0.498145 | 1:+96046733 | MsG0180005776.01.T01:CDS |
| TTTATAGCCGTGGTGTTTGG+AGG | 0.501496 | 1:+96047720 | MsG0180005776.01.T01:CDS |
| GGGTGAATGCCGCGTTTAGA+GGG | 0.502983 | 1:-96046508 | None:intergenic |
| CCGTGGTGTTTGGAGGATCA+AGG | 0.503122 | 1:+96047727 | MsG0180005776.01.T01:CDS |
| GTCATTACTGGACGCTTCAA+AGG | 0.503992 | 1:-96048204 | None:intergenic |
| CACATTGTGGTTTATAGCCG+TGG | 0.506241 | 1:+96047710 | MsG0180005776.01.T01:CDS |
| GAGGATCAAGGGCATCATAC+AGG | 0.507950 | 1:+96047739 | MsG0180005776.01.T01:CDS |
| GTGCCTCTGACTTTCTCCTC+TGG | 0.508030 | 1:+96046704 | MsG0180005776.01.T01:CDS |
| CCCTGATGATTCACACATTG+TGG | 0.513642 | 1:+96047697 | MsG0180005776.01.T01:CDS |
| TAAGAAAACAAAAGAGAAGA+AGG | 0.516063 | 1:+96046448 | MsG0180005776.01.T01:five_prime_UTR |
| ACTCTAGAGTTGTTCTTGGT+AGG | 0.521401 | 1:+96047573 | MsG0180005776.01.T01:CDS |
| GTAGAATTTGCCTCTGAACA+AGG | 0.528771 | 1:+96047383 | MsG0180005776.01.T01:intron |
| TAGTCCTCAGATTGCGTCTG+TGG | 0.530528 | 1:+96047490 | MsG0180005776.01.T01:CDS |
| CATGCTCTTCTCAGATTCAT+CGG | 0.531284 | 1:-96048679 | None:intergenic |
| ATCAGTTAGAGGTGCTGCAA+GGG | 0.541077 | 1:+96048020 | MsG0180005776.01.T01:three_prime_UTR |
| TCTCCTTCCGCCACCTATGT+CGG | 0.544351 | 1:+96046820 | MsG0180005776.01.T01:CDS |
| GGAGGCTGTGCGCTTGTCAA+CGG | 0.547101 | 1:+96047625 | MsG0180005776.01.T01:CDS |
| AATGATATGGTACGAGGTAA+GGG | 0.547720 | 1:+96049025 | MsG0180005776.01.T01:three_prime_UTR |
| TGATGATGGTGATTAGGTAT+CGG | 0.548228 | 1:-96046573 | None:intergenic |
| TAGAATTTGCCTCTGAACAA+GGG | 0.551971 | 1:+96047384 | MsG0180005776.01.T01:intron |
| CGTGGTGTTTGGAGGATCAA+GGG | 0.557389 | 1:+96047728 | MsG0180005776.01.T01:CDS |
| AGTCAGAGGCACCACGGCGA+CGG | 0.560686 | 1:-96046693 | None:intergenic |
| TACCAACATGTCTGTGATTG+TGG | 0.576029 | 1:+96047840 | MsG0180005776.01.T01:three_prime_UTR |
| GAGTTTAAGCAAACTGCTGT+TGG | 0.576565 | 1:+96048618 | MsG0180005776.01.T01:three_prime_UTR |
| ACCATCGTAAACACCGACAT+AGG | 0.579030 | 1:-96046833 | None:intergenic |
| AAAAGAAATGGAAAAGTCAG+TGG | 0.579546 | 1:-96046529 | None:intergenic |
| GACATAGGTGGCGGAAGGAG+AGG | 0.580248 | 1:-96046818 | None:intergenic |
| GAACAAGAATTCTTCTGTGG+AGG | 0.580777 | 1:+96047607 | MsG0180005776.01.T01:CDS |
| GAGGCAAGCTTATACAATGC+TGG | 0.583583 | 1:-96047993 | None:intergenic |
| AACTCTAGAGTCACCCAGGT+TGG | 0.586854 | 1:-96047561 | None:intergenic |
| TTTGCCGATAAATGGGGTAA+GGG | 0.591250 | 1:+96048062 | MsG0180005776.01.T01:three_prime_UTR |
| CATCACTTAATTGTTCCCAA+AGG | 0.592457 | 1:-96048296 | None:intergenic |
| GGAACATATCTTTGATTGAG+GGG | 0.592711 | 1:+96046475 | MsG0180005776.01.T01:five_prime_UTR |
| GGATCATAATGTAGCTGATG+AGG | 0.594161 | 1:+96047646 | MsG0180005776.01.T01:CDS |
| TGAGAACAAGAATTCTTCTG+TGG | 0.594227 | 1:+96047604 | MsG0180005776.01.T01:CDS |
| TATCTATGTATCGAAATCGA+AGG | 0.594881 | 1:-96046628 | None:intergenic |
| TGTGTAAATAAGGGAAAAGA+CGG | 0.595113 | 1:-96046891 | None:intergenic |
| GTGATCTATCTTGATCAGCA+TGG | 0.596846 | 1:+96048579 | MsG0180005776.01.T01:three_prime_UTR |
| ATCGTAAACACCGACATAGG+TGG | 0.597276 | 1:-96046830 | None:intergenic |
| ACCTATGTCGGTGTTTACGA+TGG | 0.599872 | 1:+96046832 | MsG0180005776.01.T01:CDS |
| TAATAATTTATAGATGATGA+TGG | 0.600551 | 1:-96046587 | None:intergenic |
| TATCAGTTAGAGGTGCTGCA+AGG | 0.603695 | 1:+96048019 | MsG0180005776.01.T01:three_prime_UTR |
| GGGAACATATCTTTGATTGA+GGG | 0.603886 | 1:+96046474 | MsG0180005776.01.T01:five_prime_UTR |
| GTCGGTGTTTACGATGGTCA+CGG | 0.604796 | 1:+96046838 | MsG0180005776.01.T01:CDS |
| CGATAACAGTGATATCGTCA+TGG | 0.607261 | 1:-96048557 | None:intergenic |
| CACCACAATCACAGACATGT+TGG | 0.608771 | 1:-96047842 | None:intergenic |
| GGAGAAAGTCAGAGGCACCA+CGG | 0.613215 | 1:-96046699 | None:intergenic |
| ATCTATGTATCGAAATCGAA+GGG | 0.613366 | 1:-96046627 | None:intergenic |
| GTTTCAAGTCTGTGTGCCAG+AGG | 0.616689 | 1:-96046720 | None:intergenic |
| AACGGCAATTGAGAAATCAC+CGG | 0.616907 | 1:-96046752 | None:intergenic |
| CCACAATGTGTGAATCATCA+GGG | 0.617006 | 1:-96047697 | None:intergenic |
| ATATGGTACGAGGTAAGGGT+TGG | 0.619333 | 1:+96049029 | MsG0180005776.01.T01:three_prime_UTR |
| AGTCCTCAGATTGCGTCTGT+GGG | 0.621414 | 1:+96047491 | MsG0180005776.01.T01:CDS |
| GGTGAATGCCGCGTTTAGAG+GGG | 0.622833 | 1:-96046507 | None:intergenic |
| AAAGAAATGGAAAAGTCAGT+GGG | 0.624711 | 1:-96046528 | None:intergenic |
| GAGAAATCACCGGAGGCGTG+AGG | 0.628233 | 1:-96046742 | None:intergenic |
| GTGCCAGAGGAGAAAGTCAG+AGG | 0.628468 | 1:-96046707 | None:intergenic |
| TCAGTTAGAGGTGCTGCAAG+GGG | 0.632258 | 1:+96048021 | MsG0180005776.01.T01:three_prime_UTR |
| AGAATTTGCCTCTGAACAAG+GGG | 0.635083 | 1:+96047385 | MsG0180005776.01.T01:intron |
| GACATAAAGAAAATTGACAA+AGG | 0.637095 | 1:+96048519 | MsG0180005776.01.T01:three_prime_UTR |
| AAAACTGCTTGGTGGGCAGG+TGG | 0.639272 | 1:+96049072 | MsG0180005776.01.T01:three_prime_UTR |
| ATGTAGCTGATGAGGAAGTG+AGG | 0.643026 | 1:+96047654 | MsG0180005776.01.T01:CDS |
| ACACCGACATAGGTGGCGGA+AGG | 0.644257 | 1:-96046823 | None:intergenic |
| GTGTTGTATGTTGCCAACCT+GGG | 0.647500 | 1:+96047548 | MsG0180005776.01.T01:CDS |
| ACAAATATAATATATACCGT+TGG | 0.651165 | 1:+96047763 | MsG0180005776.01.T01:exon |
| AGAGTAATTAGCCTGAGCAA+CGG | 0.654865 | 1:-96046770 | None:intergenic |
| CTTTGTTAATAAGAGACCAA+CGG | 0.656363 | 1:-96047779 | None:intergenic |
| GTGAATGCCGCGTTTAGAGG+GGG | 0.662612 | 1:-96046506 | None:intergenic |
| GATCCCACAGACGCAATCTG+AGG | 0.664939 | 1:-96047494 | None:intergenic |
| GTAAACACCGACATAGGTGG+CGG | 0.665590 | 1:-96046827 | None:intergenic |
| CAGCATGGAAGCTCTTCTAG+TGG | 0.667037 | 1:+96048594 | MsG0180005776.01.T01:three_prime_UTR |
| GATGTTTATGATAAGCAGAG+TGG | 0.667296 | 1:+96049094 | MsG0180005776.01.T01:three_prime_UTR |
| ATTAGCTATAGATCCATACA+AGG | 0.667906 | 1:-96048995 | None:intergenic |
| TAGAGAAAATATATCAACAG+GGG | 0.669880 | 1:-96048652 | None:intergenic |
| GAACAACTCTAGAGTCACCC+AGG | 0.676212 | 1:-96047565 | None:intergenic |
| CAGTTAGAGGTGCTGCAAGG+GGG | 0.703377 | 1:+96048022 | MsG0180005776.01.T01:three_prime_UTR |
| GGCAATTGAGAAATCACCGG+AGG | 0.706892 | 1:-96046749 | None:intergenic |
| GCACCTCTAACTGATAAGCG+AGG | 0.714049 | 1:-96048012 | None:intergenic |
| GGCGTTTAGTAAGACCGAGG+AGG | 0.718692 | 1:+96047433 | MsG0180005776.01.T01:CDS |
| TTCGTGAATGATATGGTACG+AGG | 0.722011 | 1:+96049019 | MsG0180005776.01.T01:three_prime_UTR |
| TTAGAGAAAATATATCAACA+GGG | 0.731235 | 1:-96048653 | None:intergenic |
| CAATGTGTGAATCATCAGGG+TGG | 0.738705 | 1:-96047694 | None:intergenic |
| GAATTTGCCTCTGAACAAGG+GGG | 0.739786 | 1:+96047386 | MsG0180005776.01.T01:intron |
| AAAGGCGTTTAGTAAGACCG+AGG | 0.745268 | 1:+96047430 | MsG0180005776.01.T01:CDS |
| CCTTGATCCTCCAAACACCA+CGG | 0.748053 | 1:-96047727 | None:intergenic |
| GGTGTTTACGATGGTCACGG+TGG | 0.770607 | 1:+96046841 | MsG0180005776.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATAATAACTACAAGTAA+TGG | - | Chr1:96046932-96046951 | None:intergenic | 15.0% |
| !! | TAATAATTTATAGATGATGA+TGG | - | Chr1:96046590-96046609 | None:intergenic | 15.0% |
| !! | TATTAAGATCTAATTTGATT+TGG | + | Chr1:96047049-96047068 | MsG0180005776.01.T01:intron | 15.0% |
| !!! | GAATAATTTTATCCAAAATA+AGG | - | Chr1:96048756-96048775 | None:intergenic | 15.0% |
| !! | ACAAAAAATGTACATAATGA+AGG | - | Chr1:96047951-96047970 | None:intergenic | 20.0% |
| !! | ACAAATATAATATATACCGT+TGG | + | Chr1:96047763-96047782 | MsG0180005776.01.T01:exon | 20.0% |
| !! | ACATTAGCAAAAAAAAACAT+AGG | - | Chr1:96047322-96047341 | None:intergenic | 20.0% |
| !! | TGAAATGAAATGAAAAGAAA+TGG | - | Chr1:96046544-96046563 | None:intergenic | 20.0% |
| !! | TTAGAGAAAATATATCAACA+GGG | - | Chr1:96048656-96048675 | None:intergenic | 20.0% |
| !! | TTTAGAGAAAATATATCAAC+AGG | - | Chr1:96048657-96048676 | None:intergenic | 20.0% |
| !!! | AGTTGTGAAGTTTATATTTT+TGG | + | Chr1:96048906-96048925 | MsG0180005776.01.T01:three_prime_UTR | 20.0% |
| !!! | GTTGTGAAGTTTATATTTTT+GGG | + | Chr1:96048907-96048926 | MsG0180005776.01.T01:three_prime_UTR | 20.0% |
| ! | AGCAAAAAAAAACATAGGTT+CGG | - | Chr1:96047317-96047336 | None:intergenic | 25.0% |
| ! | ATTGACAGAAAATATAACGA+TGG | - | Chr1:96047244-96047263 | None:intergenic | 25.0% |
| ! | GACATAAAGAAAATTGACAA+AGG | + | Chr1:96048519-96048538 | MsG0180005776.01.T01:three_prime_UTR | 25.0% |
| ! | TAAGAAAACAAAAGAGAAGA+AGG | + | Chr1:96046448-96046467 | MsG0180005776.01.T01:five_prime_UTR | 25.0% |
| ! | TAAGTGAAGATGAATATTGT+TGG | + | Chr1:96048777-96048796 | MsG0180005776.01.T01:three_prime_UTR | 25.0% |
| ! | TAATTGCAAATAAAAACCAC+CGG | - | Chr1:96047877-96047896 | None:intergenic | 25.0% |
| ! | TAGAGAAAATATATCAACAG+GGG | - | Chr1:96048655-96048674 | None:intergenic | 25.0% |
| ! | TTCTTAATATTTGCATCAGA+TGG | + | Chr1:96048273-96048292 | MsG0180005776.01.T01:three_prime_UTR | 25.0% |
| !! | AGAGTTTCAATTTTCTTACA+TGG | + | Chr1:96048396-96048415 | MsG0180005776.01.T01:intron | 25.0% |
| !! | TCGTTATATTTTCTGTCAAT+TGG | + | Chr1:96047244-96047263 | MsG0180005776.01.T01:intron | 25.0% |
| !! | TTAATTGATTAGTCCTTGTA+TGG | + | Chr1:96048982-96049001 | MsG0180005776.01.T01:three_prime_UTR | 25.0% |
| !!! | GTTTATTTTTGCCGATAAAT+GGG | + | Chr1:96048055-96048074 | MsG0180005776.01.T01:three_prime_UTR | 25.0% |
| !!! | TTTATTTTTGCCGATAAATG+GGG | + | Chr1:96048056-96048075 | MsG0180005776.01.T01:three_prime_UTR | 25.0% |
| AAAAGAAATGGAAAAGTCAG+TGG | - | Chr1:96046532-96046551 | None:intergenic | 30.0% | |
| AAACAAAAGAGAAGAAGGAA+AGG | + | Chr1:96046453-96046472 | MsG0180005776.01.T01:five_prime_UTR | 30.0% | |
| AAAGAAATGGAAAAGTCAGT+GGG | - | Chr1:96046531-96046550 | None:intergenic | 30.0% | |
| AACAAAAGAGAAGAAGGAAA+GGG | + | Chr1:96046454-96046473 | MsG0180005776.01.T01:five_prime_UTR | 30.0% | |
| ATCTATGTATCGAAATCGAA+GGG | - | Chr1:96046630-96046649 | None:intergenic | 30.0% | |
| ATTAGCTATAGATCCATACA+AGG | - | Chr1:96048998-96049017 | None:intergenic | 30.0% | |
| ATTTCCAAATTGCCGAAAAA+TGG | - | Chr1:96048178-96048197 | None:intergenic | 30.0% | |
| CTTTGTTAATAAGAGACCAA+CGG | - | Chr1:96047782-96047801 | None:intergenic | 30.0% | |
| TATCTATGTATCGAAATCGA+AGG | - | Chr1:96046631-96046650 | None:intergenic | 30.0% | |
| TGAACCATCAATCATCATTA+GGG | + | Chr1:96048230-96048249 | MsG0180005776.01.T01:three_prime_UTR | 30.0% | |
| TGTGTAAATAAGGGAAAAGA+CGG | - | Chr1:96046894-96046913 | None:intergenic | 30.0% | |
| TTGGTAAGTTAAGAGAATTC+TGG | + | Chr1:96048796-96048815 | MsG0180005776.01.T01:three_prime_UTR | 30.0% | |
| TTTCCAAATTGCCGAAAAAT+GGG | - | Chr1:96048177-96048196 | None:intergenic | 30.0% | |
| ! | AGATACTGACTGTGTAAATA+AGG | - | Chr1:96046904-96046923 | None:intergenic | 30.0% |
| ! | AGTTGCTGACATATTTTTCT+TGG | + | Chr1:96048864-96048883 | MsG0180005776.01.T01:three_prime_UTR | 30.0% |
| ! | GATACTGACTGTGTAAATAA+GGG | - | Chr1:96046903-96046922 | None:intergenic | 30.0% |
| !! | ACATGTCAATGTGTTTTTGT+TGG | + | Chr1:96047192-96047211 | MsG0180005776.01.T01:intron | 30.0% |
| !! | ATCATAAGCTGACCTTATTT+TGG | + | Chr1:96048741-96048760 | MsG0180005776.01.T01:three_prime_UTR | 30.0% |
| !! | TATAGATGATGATGGTGATT+AGG | - | Chr1:96046582-96046601 | None:intergenic | 30.0% |
| !!! | CAGTTTTTTGTTTATGTTGC+AGG | + | Chr1:96048098-96048117 | MsG0180005776.01.T01:three_prime_UTR | 30.0% |
| !!! | GGTTTATTTTTGCCGATAAA+TGG | + | Chr1:96048054-96048073 | MsG0180005776.01.T01:three_prime_UTR | 30.0% |
| AACTAACAAAAACTGCTTGG+TGG | + | Chr1:96049064-96049083 | MsG0180005776.01.T01:three_prime_UTR | 35.0% | |
| AATGATATGGTACGAGGTAA+GGG | + | Chr1:96049025-96049044 | MsG0180005776.01.T01:three_prime_UTR | 35.0% | |
| ACACATTGACATGTCAAACA+TGG | - | Chr1:96047186-96047205 | None:intergenic | 35.0% | |
| ACCAACTAACAAAAACTGCT+TGG | + | Chr1:96049061-96049080 | MsG0180005776.01.T01:three_prime_UTR | 35.0% | |
| ACTAACAAAAACTGCTTGGT+GGG | + | Chr1:96049065-96049084 | MsG0180005776.01.T01:three_prime_UTR | 35.0% | |
| AGGGAACATATCTTTGATTG+AGG | + | Chr1:96046473-96046492 | MsG0180005776.01.T01:five_prime_UTR | 35.0% | |
| CACATTGACATGTCAAACAT+GGG | - | Chr1:96047185-96047204 | None:intergenic | 35.0% | |
| CATCACTTAATTGTTCCCAA+AGG | - | Chr1:96048299-96048318 | None:intergenic | 35.0% | |
| CTGAACCATCAATCATCATT+AGG | + | Chr1:96048229-96048248 | MsG0180005776.01.T01:three_prime_UTR | 35.0% | |
| GATGTTTATGATAAGCAGAG+TGG | + | Chr1:96049094-96049113 | MsG0180005776.01.T01:three_prime_UTR | 35.0% | |
| GCTAATGTTCGTGAATGATA+TGG | + | Chr1:96049012-96049031 | MsG0180005776.01.T01:three_prime_UTR | 35.0% | |
| GGAACATATCTTTGATTGAG+GGG | + | Chr1:96046475-96046494 | MsG0180005776.01.T01:five_prime_UTR | 35.0% | |
| GGGAACATATCTTTGATTGA+GGG | + | Chr1:96046474-96046493 | MsG0180005776.01.T01:five_prime_UTR | 35.0% | |
| GTCAGCAGATGTGATAAAAA+AGG | + | Chr1:96047412-96047431 | MsG0180005776.01.T01:CDS | 35.0% | |
| TAGAATTTGCCTCTGAACAA+GGG | + | Chr1:96047384-96047403 | MsG0180005776.01.T01:intron | 35.0% | |
| TGAGAACAAGAATTCTTCTG+TGG | + | Chr1:96047604-96047623 | MsG0180005776.01.T01:CDS | 35.0% | |
| TTGACAAATCTAGAAGCTTC+AGG | - | Chr1:96046868-96046887 | None:intergenic | 35.0% | |
| ! | ACCAAGCAGTTTTTGTTAGT+TGG | - | Chr1:96049065-96049084 | None:intergenic | 35.0% |
| ! | GATTGTGGTGTAATTTTGTC+CGG | + | Chr1:96047855-96047874 | MsG0180005776.01.T01:three_prime_UTR | 35.0% |
| !! | TCTACAGAGATCCCATTTTT+CGG | + | Chr1:96048163-96048182 | MsG0180005776.01.T01:three_prime_UTR | 35.0% |
| !! | TGATGATGGTGATTAGGTAT+CGG | - | Chr1:96046576-96046595 | None:intergenic | 35.0% |
| !! | TTATTAGTTTGGTGCAGCAT+TGG | + | Chr1:96046981-96047000 | MsG0180005776.01.T01:intron | 35.0% |
| AACGGCAATTGAGAAATCAC+CGG | - | Chr1:96046755-96046774 | None:intergenic | 40.0% | |
| AATCGAAGGGTTCGAAATTG+AGG | - | Chr1:96046617-96046636 | None:intergenic | 40.0% | |
| ACCACAATGTGTGAATCATC+AGG | - | Chr1:96047701-96047720 | None:intergenic | 40.0% | |
| AGAATTTGCCTCTGAACAAG+GGG | + | Chr1:96047385-96047404 | MsG0180005776.01.T01:intron | 40.0% | |
| AGCTCCCTAATGATGATTGA+TGG | - | Chr1:96048237-96048256 | None:intergenic | 40.0% | |
| ATGGGATCTCTGTAGAAATC+TGG | - | Chr1:96048159-96048178 | None:intergenic | 40.0% | |
| ATTTGCATCAGATGGCCTTT+GGG | + | Chr1:96048281-96048300 | MsG0180005776.01.T01:three_prime_UTR | 40.0% | |
| CAAATGCAAAAAGTCCTCCT+CGG | - | Chr1:96047450-96047469 | None:intergenic | 40.0% | |
| CATAAGATACTCACAGCTCT+TGG | - | Chr1:96048351-96048370 | None:intergenic | 40.0% | |
| CATGCTCTTCTCAGATTCAT+CGG | - | Chr1:96048682-96048701 | None:intergenic | 40.0% | |
| CCACAATGTGTGAATCATCA+GGG | - | Chr1:96047700-96047719 | None:intergenic | 40.0% | |
| CGATAACAGTGATATCGTCA+TGG | - | Chr1:96048560-96048579 | None:intergenic | 40.0% | |
| GAACAAGAATTCTTCTGTGG+AGG | + | Chr1:96047607-96047626 | MsG0180005776.01.T01:CDS | 40.0% | |
| GAATGATATGGTACGAGGTA+AGG | + | Chr1:96049024-96049043 | MsG0180005776.01.T01:three_prime_UTR | 40.0% | |
| GACGGAAGCAAAAATCAAGA+GGG | - | Chr1:96046678-96046697 | None:intergenic | 40.0% | |
| GAGTTTAAGCAAACTGCTGT+TGG | + | Chr1:96048618-96048637 | MsG0180005776.01.T01:three_prime_UTR | 40.0% | |
| GGATCATAATGTAGCTGATG+AGG | + | Chr1:96047646-96047665 | MsG0180005776.01.T01:CDS | 40.0% | |
| GTAGAATTTGCCTCTGAACA+AGG | + | Chr1:96047383-96047402 | MsG0180005776.01.T01:intron | 40.0% | |
| GTGATCTATCTTGATCAGCA+TGG | + | Chr1:96048579-96048598 | MsG0180005776.01.T01:three_prime_UTR | 40.0% | |
| TACCAACATGTCTGTGATTG+TGG | + | Chr1:96047840-96047859 | MsG0180005776.01.T01:three_prime_UTR | 40.0% | |
| TATTTGCATCAGATGGCCTT+TGG | + | Chr1:96048280-96048299 | MsG0180005776.01.T01:three_prime_UTR | 40.0% | |
| TTCGTGAATGATATGGTACG+AGG | + | Chr1:96049019-96049038 | MsG0180005776.01.T01:three_prime_UTR | 40.0% | |
| TTGCAGGTGTCTAGATCTAT+TGG | + | Chr1:96048114-96048133 | MsG0180005776.01.T01:three_prime_UTR | 40.0% | |
| TTTGCCGATAAATGGGGTAA+GGG | + | Chr1:96048062-96048081 | MsG0180005776.01.T01:three_prime_UTR | 40.0% | |
| ! | AGAGTAATTAGCCTGAGCAA+CGG | - | Chr1:96046773-96046792 | None:intergenic | 40.0% |
| ! | TTTTGCCGATAAATGGGGTA+AGG | + | Chr1:96048061-96048080 | MsG0180005776.01.T01:three_prime_UTR | 40.0% |
| !! | ACTCTAGAGTTGTTCTTGGT+AGG | + | Chr1:96047573-96047592 | MsG0180005776.01.T01:CDS | 40.0% |
| !! | GATCCCATTTTTCGGCAATT+TGG | + | Chr1:96048171-96048190 | MsG0180005776.01.T01:three_prime_UTR | 40.0% |
| !!! | TTGTTTTTGTTCCACGTGCA+GGG | + | Chr1:96048429-96048448 | MsG0180005776.01.T01:intron | 40.0% |
| !!! | TTTGTTTTTGTTCCACGTGC+AGG | + | Chr1:96048428-96048447 | MsG0180005776.01.T01:intron | 40.0% |
| ACACCAACACCTCTTATCGA+AGG | + | Chr1:96047122-96047141 | MsG0180005776.01.T01:intron | 45.0% | |
| ACCATCGTAAACACCGACAT+AGG | - | Chr1:96046836-96046855 | None:intergenic | 45.0% | |
| ACTAGTAAGAGCTGCTCTTC+AGG | + | Chr1:96048464-96048483 | MsG0180005776.01.T01:three_prime_UTR | 45.0% | |
| ACTGGACGCTTCAAAGGAAT+AGG | - | Chr1:96048201-96048220 | None:intergenic | 45.0% | |
| ATATGGTACGAGGTAAGGGT+TGG | + | Chr1:96049029-96049048 | MsG0180005776.01.T01:three_prime_UTR | 45.0% | |
| ATCGTAAACACCGACATAGG+TGG | - | Chr1:96046833-96046852 | None:intergenic | 45.0% | |
| ATGTAGCTGATGAGGAAGTG+AGG | + | Chr1:96047654-96047673 | MsG0180005776.01.T01:CDS | 45.0% | |
| CAATGTGTGAATCATCAGGG+TGG | - | Chr1:96047697-96047716 | None:intergenic | 45.0% | |
| CACATTGTGGTTTATAGCCG+TGG | + | Chr1:96047710-96047729 | MsG0180005776.01.T01:CDS | 45.0% | |
| CACCACAATCACAGACATGT+TGG | - | Chr1:96047845-96047864 | None:intergenic | 45.0% | |
| CCCTGATGATTCACACATTG+TGG | + | Chr1:96047697-96047716 | MsG0180005776.01.T01:CDS | 45.0% | |
| CGACGGAAGCAAAAATCAAG+AGG | - | Chr1:96046679-96046698 | None:intergenic | 45.0% | |
| GAATTTGCCTCTGAACAAGG+GGG | + | Chr1:96047386-96047405 | MsG0180005776.01.T01:intron | 45.0% | |
| GACGCAATCTGAGGACTAAT+TGG | - | Chr1:96047488-96047507 | None:intergenic | 45.0% | |
| GAGGCAAGCTTATACAATGC+TGG | - | Chr1:96047996-96048015 | None:intergenic | 45.0% | |
| GATGGTTCAGCTGTCATTAC+TGG | - | Chr1:96048219-96048238 | None:intergenic | 45.0% | |
| GCTACCCTTACCCCATTTAT+CGG | - | Chr1:96048069-96048088 | None:intergenic | 45.0% | |
| GTCATTACTGGACGCTTCAA+AGG | - | Chr1:96048207-96048226 | None:intergenic | 45.0% | |
| GTGGGATCATGTTGTCTTCT+TGG | + | Chr1:96047509-96047528 | MsG0180005776.01.T01:CDS | 45.0% | |
| GTGTTGTATGTTGCCAACCT+GGG | + | Chr1:96047548-96047567 | MsG0180005776.01.T01:CDS | 45.0% | |
| TGGTTTATAGCCGTGGTGTT+TGG | + | Chr1:96047717-96047736 | MsG0180005776.01.T01:CDS | 45.0% | |
| TGTGTTGTATGTTGCCAACC+TGG | + | Chr1:96047547-96047566 | MsG0180005776.01.T01:CDS | 45.0% | |
| TTGCCTCGCTTATCAGTTAG+AGG | + | Chr1:96048009-96048028 | MsG0180005776.01.T01:three_prime_UTR | 45.0% | |
| TTTATAGCCGTGGTGTTTGG+AGG | + | Chr1:96047720-96047739 | MsG0180005776.01.T01:CDS | 45.0% | |
| TTTCTCAATTGCCGTTGCTC+AGG | + | Chr1:96046759-96046778 | MsG0180005776.01.T01:CDS | 45.0% | |
| ! | AAGAGCATGCTTGGTTCAGT+TGG | + | Chr1:96048693-96048712 | MsG0180005776.01.T01:three_prime_UTR | 45.0% |
| ! | ACCTATGTCGGTGTTTACGA+TGG | + | Chr1:96046832-96046851 | MsG0180005776.01.T01:CDS | 45.0% |
| ! | AGCAGCTCTTACTAGTCTCT+TGG | - | Chr1:96048460-96048479 | None:intergenic | 45.0% |
| ! | CGAGGAGGACTTTTTGCATT+TGG | + | Chr1:96047448-96047467 | MsG0180005776.01.T01:CDS | 45.0% |
| ! | GAATCTGAGAAGAGCATGCT+TGG | + | Chr1:96048684-96048703 | MsG0180005776.01.T01:three_prime_UTR | 45.0% |
| ! | TGTGGTGTAATTTTGTCCGG+TGG | + | Chr1:96047858-96047877 | MsG0180005776.01.T01:three_prime_UTR | 45.0% |
| !! | AAAGGCGTTTAGTAAGACCG+AGG | + | Chr1:96047430-96047449 | MsG0180005776.01.T01:CDS | 45.0% |
| !! | ATCAGTTAGAGGTGCTGCAA+GGG | + | Chr1:96048020-96048039 | MsG0180005776.01.T01:three_prime_UTR | 45.0% |
| !! | GGTGACTCTAGAGTTGTTCT+TGG | + | Chr1:96047569-96047588 | MsG0180005776.01.T01:CDS | 45.0% |
| !! | TATCAGTTAGAGGTGCTGCA+AGG | + | Chr1:96048019-96048038 | MsG0180005776.01.T01:three_prime_UTR | 45.0% |
| !!! | TTTTTTTTTTTTTATTAGTT+TGG | + | Chr1:96046970-96046989 | MsG0180005776.01.T01:intron | 5.0% |
| AGTCCTCAGATTGCGTCTGT+GGG | + | Chr1:96047491-96047510 | MsG0180005776.01.T01:CDS | 50.0% | |
| CAGCATGGAAGCTCTTCTAG+TGG | + | Chr1:96048594-96048613 | MsG0180005776.01.T01:three_prime_UTR | 50.0% | |
| CCTTGATCCTCCAAACACCA+CGG | - | Chr1:96047730-96047749 | None:intergenic | 50.0% | |
| CGTGGTGTTTGGAGGATCAA+GGG | + | Chr1:96047728-96047747 | MsG0180005776.01.T01:CDS | 50.0% | |
| GCACCTCTAACTGATAAGCG+AGG | - | Chr1:96048015-96048034 | None:intergenic | 50.0% | |
| GGCAATTGAGAAATCACCGG+AGG | - | Chr1:96046752-96046771 | None:intergenic | 50.0% | |
| GTAAACACCGACATAGGTGG+CGG | - | Chr1:96046830-96046849 | None:intergenic | 50.0% | |
| TAGTCCTCAGATTGCGTCTG+TGG | + | Chr1:96047490-96047509 | MsG0180005776.01.T01:CDS | 50.0% | |
| TGACAATCCCCCTTGTTCAG+AGG | - | Chr1:96047396-96047415 | None:intergenic | 50.0% | |
| ! | ACAAAAACTGCTTGGTGGGC+AGG | + | Chr1:96049069-96049088 | MsG0180005776.01.T01:three_prime_UTR | 50.0% |
| ! | ACGCCTTCGATAAGAGGTGT+TGG | - | Chr1:96047128-96047147 | None:intergenic | 50.0% |
| ! | GTCGGTGTTTACGATGGTCA+CGG | + | Chr1:96046838-96046857 | MsG0180005776.01.T01:CDS | 50.0% |
| ! | GTTTCAAGTCTGTGTGCCAG+AGG | - | Chr1:96046723-96046742 | None:intergenic | 50.0% |
| !! | AACTCTAGAGTCACCCAGGT+TGG | - | Chr1:96047564-96047583 | None:intergenic | 50.0% |
| !! | GAACAACTCTAGAGTCACCC+AGG | - | Chr1:96047568-96047587 | None:intergenic | 50.0% |
| !! | GAGGATCAAGGGCATCATAC+AGG | + | Chr1:96047739-96047758 | MsG0180005776.01.T01:CDS | 50.0% |
| !! | TCAGTTAGAGGTGCTGCAAG+GGG | + | Chr1:96048021-96048040 | MsG0180005776.01.T01:three_prime_UTR | 50.0% |
| CCAGACACGCCTTCGATAAG+AGG | - | Chr1:96047134-96047153 | None:intergenic | 55.0% | |
| CCGTGGTGTTTGGAGGATCA+AGG | + | Chr1:96047727-96047746 | MsG0180005776.01.T01:CDS | 55.0% | |
| GACTTGAAACCTCACGCCTC+CGG | + | Chr1:96046733-96046752 | MsG0180005776.01.T01:CDS | 55.0% | |
| GATCCCACAGACGCAATCTG+AGG | - | Chr1:96047497-96047516 | None:intergenic | 55.0% | |
| GGCGTTTAGTAAGACCGAGG+AGG | + | Chr1:96047433-96047452 | MsG0180005776.01.T01:CDS | 55.0% | |
| GGGTGAATGCCGCGTTTAGA+GGG | - | Chr1:96046511-96046530 | None:intergenic | 55.0% | |
| GGTGAATGCCGCGTTTAGAG+GGG | - | Chr1:96046510-96046529 | None:intergenic | 55.0% | |
| GGTGTTTACGATGGTCACGG+TGG | + | Chr1:96046841-96046860 | MsG0180005776.01.T01:CDS | 55.0% | |
| GTGAATGCCGCGTTTAGAGG+GGG | - | Chr1:96046509-96046528 | None:intergenic | 55.0% | |
| GTGCCAGAGGAGAAAGTCAG+AGG | - | Chr1:96046710-96046729 | None:intergenic | 55.0% | |
| GTGCCTCTGACTTTCTCCTC+TGG | + | Chr1:96046704-96046723 | MsG0180005776.01.T01:CDS | 55.0% | |
| TCTCCTTCCGCCACCTATGT+CGG | + | Chr1:96046820-96046839 | MsG0180005776.01.T01:CDS | 55.0% | |
| TCTTGGCAATTCCCTGCACG+TGG | - | Chr1:96048443-96048462 | None:intergenic | 55.0% | |
| TGGGTGAATGCCGCGTTTAG+AGG | - | Chr1:96046512-96046531 | None:intergenic | 55.0% | |
| ! | AAAACTGCTTGGTGGGCAGG+TGG | + | Chr1:96049072-96049091 | MsG0180005776.01.T01:three_prime_UTR | 55.0% |
| ! | CCTCTTATCGAAGGCGTGTC+TGG | + | Chr1:96047131-96047150 | MsG0180005776.01.T01:intron | 55.0% |
| ! | GATTTTTGCTTCCGTCGCCG+TGG | + | Chr1:96046682-96046701 | MsG0180005776.01.T01:CDS | 55.0% |
| ! | TCGAAGGCGTGTCTGGTGTT+TGG | + | Chr1:96047138-96047157 | MsG0180005776.01.T01:intron | 55.0% |
| !! | CAGTTAGAGGTGCTGCAAGG+GGG | + | Chr1:96048022-96048041 | MsG0180005776.01.T01:three_prime_UTR | 55.0% |
| !! | GGAGAAAGTCAGAGGCACCA+CGG | - | Chr1:96046702-96046721 | None:intergenic | 55.0% |
| CCGCGTTTAGAGGGGGAAGA+CGG | - | Chr1:96046502-96046521 | None:intergenic | 60.0% | |
| CCGTCTTCCCCCTCTAAACG+CGG | + | Chr1:96046499-96046518 | MsG0180005776.01.T01:five_prime_UTR | 60.0% | |
| GCTGCAAGGGGGAAATGGTC+TGG | + | Chr1:96048033-96048052 | MsG0180005776.01.T01:three_prime_UTR | 60.0% | |
| GGAGGCTGTGCGCTTGTCAA+CGG | + | Chr1:96047625-96047644 | MsG0180005776.01.T01:CDS | 60.0% | |
| ! | GAGAAATCACCGGAGGCGTG+AGG | - | Chr1:96046745-96046764 | None:intergenic | 60.0% |
| !! | ACACCGACATAGGTGGCGGA+AGG | - | Chr1:96046826-96046845 | None:intergenic | 60.0% |
| !! | GACATAGGTGGCGGAAGGAG+AGG | - | Chr1:96046821-96046840 | None:intergenic | 60.0% |
| !! | GAGGTGCTGCAAGGGGGAAA+TGG | + | Chr1:96048028-96048047 | MsG0180005776.01.T01:three_prime_UTR | 60.0% |
| !! | AGTCAGAGGCACCACGGCGA+CGG | - | Chr1:96046696-96046715 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 96046436 | 96049138 | 96046436 | ID=MsG0180005776.01;Name=MsG0180005776.01 |
| Chr1 | mRNA | 96046436 | 96049138 | 96046436 | ID=MsG0180005776.01.T01;Parent=MsG0180005776.01;Name=MsG0180005776.01.T01;_AED=0.23;_eAED=0.23;_QI=219|1|1|1|1|0.66|3|1273|214 |
| Chr1 | exon | 96046436 | 96046913 | 96046436 | ID=MsG0180005776.01.T01:exon:16136;Parent=MsG0180005776.01.T01 |
| Chr1 | exon | 96047387 | 96048356 | 96047387 | ID=MsG0180005776.01.T01:exon:16137;Parent=MsG0180005776.01.T01 |
| Chr1 | exon | 96048450 | 96049138 | 96048450 | ID=MsG0180005776.01.T01:exon:16138;Parent=MsG0180005776.01.T01 |
| Chr1 | five_prime_UTR | 96046436 | 96046654 | 96046436 | ID=MsG0180005776.01.T01:five_prime_utr;Parent=MsG0180005776.01.T01 |
| Chr1 | CDS | 96046655 | 96046913 | 96046655 | ID=MsG0180005776.01.T01:cds;Parent=MsG0180005776.01.T01 |
| Chr1 | CDS | 96047387 | 96047772 | 96047387 | ID=MsG0180005776.01.T01:cds;Parent=MsG0180005776.01.T01 |
| Chr1 | three_prime_UTR | 96047773 | 96048356 | 96047773 | ID=MsG0180005776.01.T01:three_prime_utr;Parent=MsG0180005776.01.T01 |
| Chr1 | three_prime_UTR | 96048450 | 96049138 | 96048450 | ID=MsG0180005776.01.T01:three_prime_utr;Parent=MsG0180005776.01.T01 |
| Gene Sequence |
| Protein sequence |
