AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180006015.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180006015.01.T01 MTR_1g111880 89.894 376 24 1 1 376 5 366 0.0 658
MsG0180006015.01.T01 MTR_7g093200 71.018 383 103 3 1 375 51 433 0.0 576
MsG0180006015.01.T01 MTR_1g054035 73.575 386 90 3 1 376 1 384 0.0 570
MsG0180006015.01.T01 MTR_5g071170 38.390 323 180 7 19 338 38 344 5.13e-67 217
MsG0180006015.01.T01 MTR_3g464330 37.463 339 193 6 3 338 13 335 4.79e-64 209
MsG0180006015.01.T01 MTR_7g068780 37.461 323 183 7 19 338 92 398 8.32e-63 207
MsG0180006015.01.T01 MTR_4g015630 36.957 322 186 5 19 338 86 392 1.03e-60 202
MsG0180006015.01.T01 MTR_7g068780 31.481 270 163 6 19 287 92 340 1.00e-34 131
MsG0180006015.01.T01 MTR_2g460790 27.778 270 165 8 75 336 148 395 3.41e-22 97.8
MsG0180006015.01.T01 MTR_4g130980 24.684 316 214 7 29 336 95 394 5.20e-21 94.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180006015.01.T01 AT3G12120 67.885 383 116 2 1 376 1 383 0.0 547
MsG0180006015.01.T01 AT3G12120 67.885 383 116 2 1 376 1 383 0.0 547
MsG0180006015.01.T01 AT3G11170 37.110 353 198 7 19 363 90 426 1.62e-66 217
MsG0180006015.01.T01 AT5G05580 38.080 323 181 5 19 338 83 389 1.05e-65 215
MsG0180006015.01.T01 AT2G29980 38.700 323 179 7 19 338 28 334 5.92e-64 209
MsG0180006015.01.T01 AT5G05580 37.419 310 175 5 19 325 83 376 7.77e-60 198
MsG0180006015.01.T01 AT2G29980 33.700 273 159 6 19 290 28 279 1.09e-39 142
MsG0180006015.01.T01 AT4G30950 25.472 318 209 9 29 336 96 395 1.04e-20 93.6

Find 95 sgRNAs with CRISPR-Local

Find 101 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACTTTATTGCATCTTTAAA+AGG 0.114116 1:+98838088 MsG0180006015.01.T01:CDS
TCATCCTTTGGCCTATCTAT+TGG 0.187997 1:+98837618 MsG0180006015.01.T01:CDS
CCAACATTTGATTTAGGTTT+TGG 0.192533 1:-98837845 None:intergenic
GCAACTGTGGATAGAGATTA+TGG 0.201403 1:+98838253 MsG0180006015.01.T01:CDS
TACTTAGCCTTCAATGTTTC+CGG 0.215177 1:+98837947 MsG0180006015.01.T01:CDS
CATCCTTTGGCCTATCTATT+GGG 0.238169 1:+98837619 MsG0180006015.01.T01:CDS
CTTTCCCTCTTAGAATATAT+TGG 0.251207 1:-98838013 None:intergenic
CTCCACAATGCCTTATAAAA+TGG 0.256640 1:-98838418 None:intergenic
AACATTGAAGGCTAAGTATA+AGG 0.261025 1:-98837942 None:intergenic
TACCATCCAACATTTGATTT+AGG 0.261939 1:-98837851 None:intergenic
CATCTCAAAAGGGTGTTTAT+TGG 0.279979 1:+98838482 MsG0180006015.01.T01:CDS
CATCTTTAAAAGGGTTTGTT+TGG 0.316297 1:+98838098 MsG0180006015.01.T01:CDS
CTTCTTATCACACTCACATT+AGG 0.332897 1:+98837914 MsG0180006015.01.T01:CDS
CAATGGCTTGATGATCTTGT+TGG 0.338062 1:+98837716 MsG0180006015.01.T01:CDS
AAAATGGTGTATCATCAAAT+TGG 0.339333 1:-98838402 None:intergenic
GTTGCATTCTCACTGGTGTT+TGG 0.340301 1:+98837651 MsG0180006015.01.T01:CDS
TTGCATTCTCACTGGTGTTT+GGG 0.367892 1:+98837652 MsG0180006015.01.T01:CDS
TTAGAATATATTGGAGCATA+AGG 0.390441 1:-98838004 None:intergenic
GTGCCATTGCTTATTGTGAA+TGG 0.394670 1:+98838139 MsG0180006015.01.T01:CDS
GGATTGGTTGAGAGGAGCTT+TGG 0.399479 1:+98838231 MsG0180006015.01.T01:CDS
TGGTAATACTCACCGAATAT+AGG 0.402323 1:-98838382 None:intergenic
GAAAAGGGAGAGGGAAGGAA+TGG 0.405846 1:-98837592 None:intergenic
TCATTATGATTCAAAGGAAT+GGG 0.424146 1:+98838210 MsG0180006015.01.T01:CDS
GGAACTCTTGAGAGAGGATT+GGG 0.424867 1:-98837425 None:intergenic
CTCATTATGATTCAAAGGAA+TGG 0.444286 1:+98838209 MsG0180006015.01.T01:CDS
ACTTTATTGCATCTTTAAAA+GGG 0.446580 1:+98838089 MsG0180006015.01.T01:CDS
TTCAACTGGCCAACCGTGAA+TGG 0.447676 1:-98837461 None:intergenic
AGATGAAGGAACATCTCAAA+AGG 0.449826 1:+98838471 MsG0180006015.01.T01:CDS
CTCCAAGGTTGCATTCTCAC+TGG 0.463028 1:+98837644 MsG0180006015.01.T01:CDS
CAACTGTGGATAGAGATTAT+GGG 0.467467 1:+98838254 MsG0180006015.01.T01:CDS
ATGCATTTAGTAACTATCAA+TGG 0.468679 1:+98837699 MsG0180006015.01.T01:CDS
ATGCTCCAATATATTCTAAG+AGG 0.469919 1:+98838008 MsG0180006015.01.T01:CDS
CCTATCTATTGGGTTCTCCA+AGG 0.480620 1:+98837629 MsG0180006015.01.T01:CDS
GGCCAAAGGATGAAGGGAAA+AGG 0.480964 1:-98837608 None:intergenic
GTGGAATGGATTTCTTCAAC+TGG 0.482053 1:-98837475 None:intergenic
ACATTGAAGGCTAAGTATAA+GGG 0.483455 1:-98837941 None:intergenic
CCTTGGAGAACCCAATAGAT+AGG 0.483852 1:-98837629 None:intergenic
ATGATTCAAAGGAATGGGAT+TGG 0.488042 1:+98838215 MsG0180006015.01.T01:CDS
TAAATACTTAAACAATCCAC+TGG 0.492749 1:+98837877 MsG0180006015.01.T01:CDS
GAATATAGGCTTCATTGCAT+TGG 0.497237 1:-98838368 None:intergenic
AATGCAATGAAGCCTATATT+CGG 0.498212 1:+98838370 MsG0180006015.01.T01:CDS
CTCTATGTGGAGCCAGATGA+AGG 0.500591 1:+98838457 MsG0180006015.01.T01:CDS
GGATGAAGGGAAAAGGGAGA+GGG 0.508343 1:-98837601 None:intergenic
ACACACAAAGCCACCATTCA+CGG 0.510864 1:+98837448 MsG0180006015.01.T01:CDS
AGTAGTGGAAATGTAGAGAA+CGG 0.512985 1:-98837564 None:intergenic
CATTCCTTTGAATCATAATG+AGG 0.513118 1:-98838208 None:intergenic
TTTGCCTCATTATGATTCAA+AGG 0.514799 1:+98838204 MsG0180006015.01.T01:CDS
CATTGGTTGCTTCCATCGCA+TGG 0.516256 1:-98838351 None:intergenic
CGAGAGAAGCTGTGTTCGAA+TGG 0.523101 1:-98837802 None:intergenic
GCCAAAGGATGAAGGGAAAA+GGG 0.524531 1:-98837607 None:intergenic
ATAGATAGGCCAAAGGATGA+AGG 0.525316 1:-98837615 None:intergenic
AGGATGAAGGGAAAAGGGAG+AGG 0.527047 1:-98837602 None:intergenic
TTCAAAGCAATGTGGTGGAA+TGG 0.527193 1:-98837489 None:intergenic
TGGAACTCTTGAGAGAGGAT+TGG 0.527946 1:-98837426 None:intergenic
TAGAATATATTGGAGCATAA+GGG 0.529054 1:-98838003 None:intergenic
CACCAGTGAGAATGCAACCT+TGG 0.529135 1:-98837646 None:intergenic
GAAGGGAAAAGGGAGAGGGA+AGG 0.532461 1:-98837597 None:intergenic
CCAAAACCTAAATCAAATGT+TGG 0.535205 1:+98837845 MsG0180006015.01.T01:CDS
AGGTCTACCGGAAACATTGA+AGG 0.537703 1:-98837954 None:intergenic
GCTAAAGAAACAATGGGAGC+TGG 0.539812 1:+98837380 None:intergenic
AAGGAATGGGATTGGTTGAG+AGG 0.545417 1:+98838223 MsG0180006015.01.T01:CDS
AACCTAAATCAAATGTTGGA+TGG 0.561834 1:+98837849 MsG0180006015.01.T01:CDS
GAATTGATCGTAAGGTCTAC+CGG 0.566769 1:-98837966 None:intergenic
TAGATAGGCCAAAGGATGAA+GGG 0.573383 1:-98837614 None:intergenic
GCTTCCATCGCATGGTAATG+TGG 0.575316 1:-98838343 None:intergenic
TGACTTGCGAATTGATCGTA+AGG 0.578650 1:-98837974 None:intergenic
GAAGGAATGGAAGTAAGTAG+TGG 0.583698 1:-98837579 None:intergenic
GTGTGTGGAACTCTTGAGAG+AGG 0.588663 1:-98837431 None:intergenic
CTACATAGGAGAATGATAAG+TGG 0.588811 1:-98837520 None:intergenic
TTATCACACTCACATTAGGA+TGG 0.598000 1:+98837918 MsG0180006015.01.T01:CDS
GATGAAGGAACATCTCAAAA+GGG 0.598218 1:+98838472 MsG0180006015.01.T01:CDS
ATTGATAGTTACTAAATGCA+TGG 0.602384 1:-98837697 None:intergenic
TGCTCCAATATATTCTAAGA+GGG 0.609162 1:+98838009 MsG0180006015.01.T01:CDS
GAACGTTCAAAGCAATGTGG+TGG 0.609842 1:-98837494 None:intergenic
AAGCTGTGTTCGAATGGTGT+CGG 0.610551 1:-98837796 None:intergenic
AACTGGCCAACCGTGAATGG+TGG 0.611217 1:-98837458 None:intergenic
TGGGTTTAGAAGCAGTGACA+TGG 0.612269 1:-98837406 None:intergenic
AAACCATTCACAATAAGCAA+TGG 0.614560 1:-98838142 None:intergenic
ACAAAGCCACCATTCACGGT+TGG 0.616212 1:+98837452 MsG0180006015.01.T01:CDS
AGCAAAAGAGTGTCTCTATG+TGG 0.618059 1:+98838444 MsG0180006015.01.T01:CDS
ATAGGAGAATGATAAGTGGA+TGG 0.621636 1:-98837516 None:intergenic
GAGAGGAGCTTTGGCAACTG+TGG 0.626943 1:+98838240 MsG0180006015.01.T01:CDS
AATGCCACATTACCATGCGA+TGG 0.627823 1:+98838339 MsG0180006015.01.T01:CDS
GTGAATGGTGGCTTTGTGTG+TGG 0.628684 1:-98837446 None:intergenic
AAAGAAACAATGGGAGCTGG+AGG 0.629589 1:+98837383 None:intergenic
AGAGTTAAAGCTCTTCCCAG+TGG 0.650628 1:-98837893 None:intergenic
CGCATGGTAATGTGGCATTG+TGG 0.650689 1:-98838335 None:intergenic
TCACATCACTGATACTCATG+TGG 0.670515 1:+98838297 MsG0180006015.01.T01:CDS
AGAGAACGGAGGCTATTGAA+AGG 0.675404 1:-98837550 None:intergenic
GAACCCAATAGATAGGCCAA+AGG 0.677680 1:-98837622 None:intergenic
TGGGTGATAGCTCATGAATG+TGG 0.695786 1:+98837671 MsG0180006015.01.T01:CDS
AAATACTTAAACAATCCACT+GGG 0.704566 1:+98837878 MsG0180006015.01.T01:CDS
GATAGTTACTAAATGCATGG+TGG 0.712590 1:-98837694 None:intergenic
AGTGGAAATGTAGAGAACGG+AGG 0.730120 1:-98837561 None:intergenic
ATGGAACGTTCAAAGCAATG+TGG 0.786829 1:-98837497 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TACTTTATTGCATCTTTAAA+AGG + Chr1:98838088-98838107 MsG0180006015.01.T01:CDS 20.0%
!!! ACTTTATTGCATCTTTAAAA+GGG + Chr1:98838089-98838108 MsG0180006015.01.T01:CDS 20.0%
! AAAATGGTGTATCATCAAAT+TGG - Chr1:98838405-98838424 None:intergenic 25.0%
! AAATACTTAAACAATCCACT+GGG + Chr1:98837878-98837897 MsG0180006015.01.T01:CDS 25.0%
! ATGCATTTAGTAACTATCAA+TGG + Chr1:98837699-98837718 MsG0180006015.01.T01:CDS 25.0%
! TAAATACTTAAACAATCCAC+TGG + Chr1:98837877-98837896 MsG0180006015.01.T01:CDS 25.0%
! TAGAATATATTGGAGCATAA+GGG - Chr1:98838006-98838025 None:intergenic 25.0%
! TCATTATGATTCAAAGGAAT+GGG + Chr1:98838210-98838229 MsG0180006015.01.T01:CDS 25.0%
! TTAGAATATATTGGAGCATA+AGG - Chr1:98838007-98838026 None:intergenic 25.0%
!! ATTGATAGTTACTAAATGCA+TGG - Chr1:98837700-98837719 None:intergenic 25.0%
!! TGATGATACACCATTTTATA+AGG + Chr1:98838408-98838427 MsG0180006015.01.T01:CDS 25.0%
!! TGATTTTCCATGAGAAATAT+GGG - Chr1:98837769-98837788 None:intergenic 25.0%
AAACCATTCACAATAAGCAA+TGG - Chr1:98838145-98838164 None:intergenic 30.0%
AACATTGAAGGCTAAGTATA+AGG - Chr1:98837945-98837964 None:intergenic 30.0%
AACCTAAATCAAATGTTGGA+TGG + Chr1:98837849-98837868 MsG0180006015.01.T01:CDS 30.0%
AATGCAATGAAGCCTATATT+CGG + Chr1:98838370-98838389 MsG0180006015.01.T01:CDS 30.0%
ACATTGAAGGCTAAGTATAA+GGG - Chr1:98837944-98837963 None:intergenic 30.0%
ATGCTCCAATATATTCTAAG+AGG + Chr1:98838008-98838027 MsG0180006015.01.T01:CDS 30.0%
CATTCCTTTGAATCATAATG+AGG - Chr1:98838211-98838230 None:intergenic 30.0%
CCAAAACCTAAATCAAATGT+TGG + Chr1:98837845-98837864 MsG0180006015.01.T01:CDS 30.0%
CTCATTATGATTCAAAGGAA+TGG + Chr1:98838209-98838228 MsG0180006015.01.T01:CDS 30.0%
CTTTCCCTCTTAGAATATAT+TGG - Chr1:98838016-98838035 None:intergenic 30.0%
TGAAAGGTCAAAAACTACAT+AGG - Chr1:98837537-98837556 None:intergenic 30.0%
TTTGCCTCATTATGATTCAA+AGG + Chr1:98838204-98838223 MsG0180006015.01.T01:CDS 30.0%
! CATCTTTAAAAGGGTTTGTT+TGG + Chr1:98838098-98838117 MsG0180006015.01.T01:CDS 30.0%
! CTGATTTTCCATGAGAAATA+TGG - Chr1:98837770-98837789 None:intergenic 30.0%
! TACCATCCAACATTTGATTT+AGG - Chr1:98837854-98837873 None:intergenic 30.0%
! TGCTCCAATATATTCTAAGA+GGG + Chr1:98838009-98838028 MsG0180006015.01.T01:CDS 30.0%
! TTTTAGTCCCATATTTCTCA+TGG + Chr1:98837759-98837778 MsG0180006015.01.T01:CDS 30.0%
!! CCAACATTTGATTTAGGTTT+TGG - Chr1:98837848-98837867 None:intergenic 30.0%
AGATGAAGGAACATCTCAAA+AGG + Chr1:98838471-98838490 MsG0180006015.01.T01:CDS 35.0%
ATAGGAGAATGATAAGTGGA+TGG - Chr1:98837519-98837538 None:intergenic 35.0%
ATGATTCAAAGGAATGGGAT+TGG + Chr1:98838215-98838234 MsG0180006015.01.T01:CDS 35.0%
CAACTGTGGATAGAGATTAT+GGG + Chr1:98838254-98838273 MsG0180006015.01.T01:CDS 35.0%
CTACATAGGAGAATGATAAG+TGG - Chr1:98837523-98837542 None:intergenic 35.0%
CTCCACAATGCCTTATAAAA+TGG - Chr1:98838421-98838440 None:intergenic 35.0%
CTTCTTATCACACTCACATT+AGG + Chr1:98837914-98837933 MsG0180006015.01.T01:CDS 35.0%
GAATATAGGCTTCATTGCAT+TGG - Chr1:98838371-98838390 None:intergenic 35.0%
GATAGTTACTAAATGCATGG+TGG - Chr1:98837697-98837716 None:intergenic 35.0%
GATGAAGGAACATCTCAAAA+GGG + Chr1:98838472-98838491 MsG0180006015.01.T01:CDS 35.0%
TGGTAATACTCACCGAATAT+AGG - Chr1:98838385-98838404 None:intergenic 35.0%
TTATCACACTCACATTAGGA+TGG + Chr1:98837918-98837937 MsG0180006015.01.T01:CDS 35.0%
! AGTAGTGGAAATGTAGAGAA+CGG - Chr1:98837567-98837586 None:intergenic 35.0%
! TACTTAGCCTTCAATGTTTC+CGG + Chr1:98837947-98837966 MsG0180006015.01.T01:CDS 35.0%
!! CATCTCAAAAGGGTGTTTAT+TGG + Chr1:98838482-98838501 MsG0180006015.01.T01:CDS 35.0%
!!! CACCATTTTATAAGGCATTG+TGG + Chr1:98838416-98838435 MsG0180006015.01.T01:CDS 35.0%
!!! TTTTGAGATGTTCCTTCATC+TGG - Chr1:98838472-98838491 None:intergenic 35.0%
ATAGATAGGCCAAAGGATGA+AGG - Chr1:98837618-98837637 None:intergenic 40.0%
ATGGAACGTTCAAAGCAATG+TGG - Chr1:98837500-98837519 None:intergenic 40.0%
CATCCTTTGGCCTATCTATT+GGG + Chr1:98837619-98837638 MsG0180006015.01.T01:CDS 40.0%
GAAGGAATGGAAGTAAGTAG+TGG - Chr1:98837582-98837601 None:intergenic 40.0%
GAATTGATCGTAAGGTCTAC+CGG - Chr1:98837969-98837988 None:intergenic 40.0%
GCAACTGTGGATAGAGATTA+TGG + Chr1:98838253-98838272 MsG0180006015.01.T01:CDS 40.0%
TAGATAGGCCAAAGGATGAA+GGG - Chr1:98837617-98837636 None:intergenic 40.0%
TCACATCACTGATACTCATG+TGG + Chr1:98838297-98838316 MsG0180006015.01.T01:CDS 40.0%
TCATCCTTTGGCCTATCTAT+TGG + Chr1:98837618-98837637 MsG0180006015.01.T01:CDS 40.0%
TTGCATTCTCACTGGTGTTT+GGG + Chr1:98837652-98837671 MsG0180006015.01.T01:CDS 40.0%
! CAATGGCTTGATGATCTTGT+TGG + Chr1:98837716-98837735 MsG0180006015.01.T01:CDS 40.0%
! GTGCCATTGCTTATTGTGAA+TGG + Chr1:98838139-98838158 MsG0180006015.01.T01:CDS 40.0%
! GTGGAATGGATTTCTTCAAC+TGG - Chr1:98837478-98837497 None:intergenic 40.0%
! TGACTTGCGAATTGATCGTA+AGG - Chr1:98837977-98837996 None:intergenic 40.0%
! TTCAAAGCAATGTGGTGGAA+TGG - Chr1:98837492-98837511 None:intergenic 40.0%
!! AGCAAAAGAGTGTCTCTATG+TGG + Chr1:98838444-98838463 MsG0180006015.01.T01:CDS 40.0%
AAGCTGTGTTCGAATGGTGT+CGG - Chr1:98837799-98837818 None:intergenic 45.0%
AATGCCACATTACCATGCGA+TGG + Chr1:98838339-98838358 MsG0180006015.01.T01:CDS 45.0%
ACACACAAAGCCACCATTCA+CGG + Chr1:98837448-98837467 MsG0180006015.01.T01:CDS 45.0%
AGAGAACGGAGGCTATTGAA+AGG - Chr1:98837553-98837572 None:intergenic 45.0%
AGAGTTAAAGCTCTTCCCAG+TGG - Chr1:98837896-98837915 None:intergenic 45.0%
AGGTCTACCGGAAACATTGA+AGG - Chr1:98837957-98837976 None:intergenic 45.0%
AGTGGAAATGTAGAGAACGG+AGG - Chr1:98837564-98837583 None:intergenic 45.0%
CCTATCTATTGGGTTCTCCA+AGG + Chr1:98837629-98837648 MsG0180006015.01.T01:CDS 45.0%
CCTTGGAGAACCCAATAGAT+AGG - Chr1:98837632-98837651 None:intergenic 45.0%
GAACCCAATAGATAGGCCAA+AGG - Chr1:98837625-98837644 None:intergenic 45.0%
GAACGTTCAAAGCAATGTGG+TGG - Chr1:98837497-98837516 None:intergenic 45.0%
GCCAAAGGATGAAGGGAAAA+GGG - Chr1:98837610-98837629 None:intergenic 45.0%
GGAACTCTTGAGAGAGGATT+GGG - Chr1:98837428-98837447 None:intergenic 45.0%
GTTGCATTCTCACTGGTGTT+TGG + Chr1:98837651-98837670 MsG0180006015.01.T01:CDS 45.0%
TGGAACTCTTGAGAGAGGAT+TGG - Chr1:98837429-98837448 None:intergenic 45.0%
TGGGTGATAGCTCATGAATG+TGG + Chr1:98837671-98837690 MsG0180006015.01.T01:CDS 45.0%
TGGGTTTAGAAGCAGTGACA+TGG - Chr1:98837409-98837428 None:intergenic 45.0%
! TCCCTTTTCCCTTCATCCTT+TGG + Chr1:98837606-98837625 MsG0180006015.01.T01:CDS 45.0%
!! AAGGAATGGGATTGGTTGAG+AGG + Chr1:98838223-98838242 MsG0180006015.01.T01:CDS 45.0%
ACAAAGCCACCATTCACGGT+TGG + Chr1:98837452-98837471 MsG0180006015.01.T01:CDS 50.0%
AGGATGAAGGGAAAAGGGAG+AGG - Chr1:98837605-98837624 None:intergenic 50.0%
CACCAGTGAGAATGCAACCT+TGG - Chr1:98837649-98837668 None:intergenic 50.0%
CGAGAGAAGCTGTGTTCGAA+TGG - Chr1:98837805-98837824 None:intergenic 50.0%
CTCCAAGGTTGCATTCTCAC+TGG + Chr1:98837644-98837663 MsG0180006015.01.T01:CDS 50.0%
CTCTATGTGGAGCCAGATGA+AGG + Chr1:98838457-98838476 MsG0180006015.01.T01:CDS 50.0%
GAAAAGGGAGAGGGAAGGAA+TGG - Chr1:98837595-98837614 None:intergenic 50.0%
GGATGAAGGGAAAAGGGAGA+GGG - Chr1:98837604-98837623 None:intergenic 50.0%
GGCCAAAGGATGAAGGGAAA+AGG - Chr1:98837611-98837630 None:intergenic 50.0%
GTGTGTGGAACTCTTGAGAG+AGG - Chr1:98837434-98837453 None:intergenic 50.0%
TTCAACTGGCCAACCGTGAA+TGG - Chr1:98837464-98837483 None:intergenic 50.0%
! CATTGGTTGCTTCCATCGCA+TGG - Chr1:98838354-98838373 None:intergenic 50.0%
! CGCATGGTAATGTGGCATTG+TGG - Chr1:98838338-98838357 None:intergenic 50.0%
! GCTTCCATCGCATGGTAATG+TGG - Chr1:98838346-98838365 None:intergenic 50.0%
!! GGATTGGTTGAGAGGAGCTT+TGG + Chr1:98838231-98838250 MsG0180006015.01.T01:CDS 50.0%
!! GTGAATGGTGGCTTTGTGTG+TGG - Chr1:98837449-98837468 None:intergenic 50.0%
AACTGGCCAACCGTGAATGG+TGG - Chr1:98837461-98837480 None:intergenic 55.0%
GAAGGGAAAAGGGAGAGGGA+AGG - Chr1:98837600-98837619 None:intergenic 55.0%
! GAGAGGAGCTTTGGCAACTG+TGG + Chr1:98838240-98838259 MsG0180006015.01.T01:CDS 55.0%
Chromosome Type Strat End Strand Name
Chr1 gene 98837392 98838522 98837392 ID=MsG0180006015.01;Name=MsG0180006015.01
Chr1 mRNA 98837392 98838522 98837392 ID=MsG0180006015.01.T01;Parent=MsG0180006015.01;Name=MsG0180006015.01.T01;_AED=0.45;_eAED=0.45;_QI=0|-1|0|1|-1|1|1|0|376
Chr1 exon 98837392 98838522 98837392 ID=MsG0180006015.01.T01:exon:50958;Parent=MsG0180006015.01.T01
Chr1 CDS 98837392 98838522 98837392 ID=MsG0180006015.01.T01:cds;Parent=MsG0180006015.01.T01
Gene Sequence

>MsG0180006015.01.T01

ATGGGAGCTGGAGGCCATGTCACTGCTTCTAAACCCAATCCTCTCTCAAGAGTTCCACACACAAAGCCACCATTCACGGTTGGCCAGTTGAAGAAATCCATTCCACCACATTGCTTTGAACGTTCCATCCACTTATCATTCTCCTATGTAGTTTTTGACCTTTCAATAGCCTCCGTTCTCTACATTTCCACTACTTACTTCCATTCCTTCCCTCTCCCTTTTCCCTTCATCCTTTGGCCTATCTATTGGGTTCTCCAAGGTTGCATTCTCACTGGTGTTTGGGTGATAGCTCATGAATGTGGCCACCATGCATTTAGTAACTATCAATGGCTTGATGATCTTGTTGGTTTCATACTTCATACTTCACTTTTAGTCCCATATTTCTCATGGAAAATCAGTCATCGCCGACACCATTCGAACACAGCTTCTCTCGAACGCGACGAAGTTTTTGTTCCAAAACCTAAATCAAATGTTGGATGGTATAGTAAATACTTAAACAATCCACTGGGAAGAGCTTTAACTCTTCTTATCACACTCACATTAGGATGGCCCTTATACTTAGCCTTCAATGTTTCCGGTAGACCTTACGATCAATTCGCAAGTCACTATCACCCTTATGCTCCAATATATTCTAAGAGGGAAAGACTTCAAGTTTCTGTTTCTGTTGCAGCTGTTTTAGCTGCTACTTATTTGCTCTACTTTATTGCATCTTTAAAAGGGTTTGTTTGGTTGATATATGTGTATTTTGTGCCATTGCTTATTGTGAATGGTTTTCTTGTAACAATAACTTATTTGCAGCATACACATTTTTCTTTGCCTCATTATGATTCAAAGGAATGGGATTGGTTGAGAGGAGCTTTGGCAACTGTGGATAGAGATTATGGGATTTTAAACAAAGTGTTTCATCACATCACTGATACTCATGTGGCTCATCATATCTTTTCCACAATGCCACATTACCATGCGATGGAAGCAACCAATGCAATGAAGCCTATATTCGGTGAGTATTACCAATTTGATGATACACCATTTTATAAGGCATTGTGGAGAGAAGCAAAAGAGTGTCTCTATGTGGAGCCAGATGAAGGAACATCTCAAAAGGGTGTTTATTGGTACAAAAACAAGTTTTGA
Protein sequence

>MsG0180006015.01.T01

MGAGGHVTASKPNPLSRVPHTKPPFTVGQLKKSIPPHCFERSIHLSFSYVVFDLSIASVLYISTTYFHSFPLPFPFILWPIYWVLQGCILTGVWVIAHECGHHAFSNYQWLDDLVGFILHTSLLVPYFSWKISHRRHHSNTASLERDEVFVPKPKSNVGWYSKYLNNPLGRALTLLITLTLGWPLYLAFNVSGRPYDQFASHYHPYAPIYSKRERLQVSVSVAAVLAATYLLYFIASLKGFVWLIYVYFVPLLIVNGFLVTITYLQHTHFSLPHYDSKEWDWLRGALATVDRDYGILNKVFHHITDTHVAHHIFSTMPHYHAMEATNAMKPIFGEYYQFDDTPFYKALWREAKECLYVEPDEGTSQKGVYWYKNKF*