AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180006095.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180006095.01.T01 MTR_1g114270 90.980 255 23 0 1 255 71 325 4.05e-161 471
MsG0180006095.01.T01 MTR_1g114190 72.277 202 41 1 54 255 807 993 4.80e-87 282
MsG0180006095.01.T01 MTR_3g109630 49.455 275 118 1 2 255 110 384 4.23e-84 271
MsG0180006095.01.T01 MTR_6g043090 43.922 255 143 0 1 255 264 518 5.39e-66 222
MsG0180006095.01.T01 MTR_1g073760 45.923 233 126 0 23 255 151 383 1.06e-64 218
MsG0180006095.01.T01 MTR_1g044480 43.952 248 139 0 15 262 158 405 4.77e-64 216
MsG0180006095.01.T01 MTR_8g040190 34.711 242 145 4 2 231 231 471 2.06e-31 122
MsG0180006095.01.T02 MTR_1g114270 88.421 190 22 0 123 312 645 834 2.46e-113 349
MsG0180006095.01.T02 MTR_1g114270 94.393 107 6 0 19 125 463 569 2.50e-60 207
MsG0180006095.01.T02 MTR_1g114190 55.849 265 59 5 35 260 1116 1361 1.03e-76 255
MsG0180006095.01.T02 MTR_3g109630 58.757 177 70 2 126 300 709 884 2.33e-61 210
MsG0180006095.01.T02 MTR_3g109630 66.355 107 36 0 19 125 524 630 1.30e-41 154
MsG0180006095.01.T02 MTR_1g073760 37.838 111 68 1 16 125 523 633 3.08e-20 91.7
MsG0180006095.01.T02 MTR_1g073760 30.247 162 100 2 161 312 752 910 2.94e-12 67.8
MsG0180006095.01.T02 MTR_1g044480 39.252 107 65 0 19 125 543 649 6.05e-20 90.9
MsG0180006095.01.T02 MTR_1g044480 29.814 161 105 1 161 313 768 928 2.62e-13 70.9
MsG0180006095.01.T02 MTR_6g043090 37.500 96 60 0 30 125 672 767 4.73e-16 79.3
MsG0180006095.01.T02 MTR_8g040190 26.866 201 125 4 105 299 813 997 8.68e-12 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180006095.01.T01 AT2G20010 54.887 266 101 3 2 250 74 337 4.21e-90 286
MsG0180006095.01.T01 AT2G25800 56.356 236 101 2 20 255 140 373 8.44e-86 275
MsG0180006095.01.T01 AT2G20010 57.014 221 90 2 33 250 1 219 1.19e-79 256
MsG0180006095.01.T01 AT2G33420 45.276 254 138 1 2 254 153 406 4.28e-70 233
MsG0180006095.01.T01 AT1G04470 47.034 236 122 2 18 252 168 401 2.26e-65 220
MsG0180006095.01.T01 AT5G06970 35.714 210 129 2 28 231 260 469 5.41e-30 119
MsG0180006095.01.T01 AT4G11670 30.415 217 127 6 28 231 230 435 8.59e-19 86.3
MsG0180006095.01.T01 AT4G11670 30.415 217 127 6 28 231 230 435 1.01e-18 85.9
MsG0180006095.01.T01 AT4G11670 30.415 217 127 6 28 231 230 435 1.06e-18 85.9
MsG0180006095.01.T01 AT4G11670 28.333 240 148 6 5 231 202 430 9.77e-17 80.1
MsG0180006095.01.T02 AT2G25800 53.488 172 78 1 131 300 702 873 7.64e-57 197
MsG0180006095.01.T02 AT2G25800 71.154 104 30 0 19 122 513 616 5.06e-44 161
MsG0180006095.01.T02 AT2G20010 50.847 177 82 3 126 301 549 721 1.67e-46 168
MsG0180006095.01.T02 AT2G20010 72.897 107 29 0 19 125 364 470 6.02e-45 163
MsG0180006095.01.T02 AT2G20010 50.847 177 82 3 126 301 667 839 2.00e-46 168
MsG0180006095.01.T02 AT2G20010 72.897 107 29 0 19 125 482 588 4.94e-45 164
MsG0180006095.01.T02 AT1G04470 42.056 107 62 0 19 125 550 656 1.53e-21 95.9
MsG0180006095.01.T02 AT1G04470 30.986 142 95 1 161 299 775 916 4.13e-14 73.6
MsG0180006095.01.T02 AT2G33420 42.056 107 62 0 19 125 552 658 2.92e-21 95.1
MsG0180006095.01.T02 AT2G33420 30.723 166 98 3 161 309 778 943 1.35e-14 75.1
MsG0180006095.01.T02 AT5G06970 36.275 102 63 1 19 120 632 731 1.98e-12 68.6

Find 238 sgRNAs with CRISPR-Local

Find 338 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGCGTATTCGCATGGAATT+AGG 0.176354 1:-100090293 MsG0180006095.01.T01:three_prime_UTR
TCTTAGTTTGGGACTAAATA+TGG 0.181516 1:+100091325 None:intergenic
AAGGCAGAAATTGGAGAAAA+TGG 0.200128 1:-100091444 MsG0180006095.01.T01:intron
GAGGGGTCTGCCTTATTTAA+TGG 0.232371 1:+100092349 None:intergenic
TCGCAGTCGGAGAGGGAAAT+AGG 0.240941 1:-100093442 MsG0180006095.01.T01:five_prime_UTR
TAAAACTGCATGCATGGATA+TGG 0.245550 1:+100090666 None:intergenic
AAGATCTATGTCACACTCTT+TGG 0.248316 1:-100090115 MsG0180006095.01.T01:three_prime_UTR
TCGCATGGAATTAGGGGTTT+TGG 0.256112 1:-100090285 MsG0180006095.01.T01:three_prime_UTR
AGCTTCTGAGTGACTTGTTC+TGG 0.265826 1:-100089862 MsG0180006095.01.T01:three_prime_UTR
TCACGGTGTATTCCGGAAAA+AGG 0.284215 1:-100090417 MsG0180006095.01.T01:three_prime_UTR
CTGCTATTTGCAATATCTAT+AGG 0.289827 1:+100092283 None:intergenic
CCTTCCGGAAACTAAATATA+TGG 0.293835 1:-100089390 MsG0180006095.01.T01:three_prime_UTR
TTTACTTCCTGAATTGATAT+CGG 0.295487 1:-100090647 MsG0180006095.01.T01:three_prime_UTR
GAGGATGCCATCTCTTAGTT+TGG 0.304101 1:+100091313 None:intergenic
GGGCTCCATTTCTCTGCTTT+CGG 0.308043 1:+100089675 None:intergenic
TCAAGACCCGATATCAATTC+AGG 0.309362 1:+100090640 None:intergenic
AACTTCCTCCAGCAGATTAC+AGG 0.316079 1:+100091943 None:intergenic
CATTACTGAACTGGCTTTCA+AGG 0.324940 1:-100091354 MsG0180006095.01.T01:three_prime_UTR
GGAAATATCACGGTGTATTC+CGG 0.325491 1:-100090424 MsG0180006095.01.T01:three_prime_UTR
AACAAGCTTCTAAAAGAGTT+TGG 0.335162 1:+100092143 None:intergenic
GAGCTCCGATGAGGGTAAAT+TGG 0.338605 1:+100093534 None:intergenic
GAGTTGAAGAAATATGTTAA+AGG 0.340060 1:-100091243 MsG0180006095.01.T01:three_prime_UTR
CCTCGTTATATATAATTTAG+TGG 0.342749 1:-100089513 MsG0180006095.01.T01:three_prime_UTR
TCCGCACATTCCATTAAATA+AGG 0.352449 1:-100092359 MsG0180006095.01.T01:CDS
TCCTGTTGGTGGTTGTTGGC+GGG 0.368847 1:-100089942 MsG0180006095.01.T01:three_prime_UTR
GCTACCCTTCACGTGTGTTA+TGG 0.370036 1:-100091270 MsG0180006095.01.T01:three_prime_UTR
AGTGGATAGACTGGCGGAAT+TGG 0.374179 1:-100091028 MsG0180006095.01.T01:three_prime_UTR
GGAGCAAAGCCCTCTTTGTT+TGG 0.378512 1:+100090748 None:intergenic
GATAATCTCATGAGTATAAT+CGG 0.385594 1:-100091735 MsG0180006095.01.T01:three_prime_UTR
CGCAGTCGGAGAGGGAAATA+GGG 0.386399 1:-100093441 MsG0180006095.01.T01:five_prime_UTR
AGATCTATGTCACACTCTTT+GGG 0.386885 1:-100090114 MsG0180006095.01.T01:three_prime_UTR
GGGAAATAGGGATCCGGCAC+CGG 0.388370 1:-100093429 MsG0180006095.01.T01:five_prime_UTR
GCAATTTAGTCAACTTACTA+AGG 0.390059 1:-100089739 MsG0180006095.01.T01:three_prime_UTR
CTCAAAGCTTTCGAGTAAAT+AGG 0.390164 1:+100091894 None:intergenic
TTCCTCCTCTGAGTCATTTG+TGG 0.393323 1:+100090389 None:intergenic
GGAATTAGAATTGCTAAGAT+TGG 0.397439 1:+100090247 None:intergenic
TGGTGGAAAATCTATTATAA+TGG 0.397715 1:-100091115 MsG0180006095.01.T01:three_prime_UTR
ACCACCATATATTTAGTTTC+CGG 0.397972 1:+100089386 None:intergenic
AGCGTATTCGCATGGAATTA+GGG 0.400298 1:-100090292 MsG0180006095.01.T01:three_prime_UTR
ACGGGTTTCCAATGAACCTT+TGG 0.402281 1:-100092171 MsG0180006095.01.T01:CDS
AAGCCCTCTTTGTTTGGCTG+TGG 0.406240 1:+100090754 None:intergenic
AGAAGTGTGTCGGGTTCTCT+AGG 0.407191 1:+100089654 None:intergenic
GACATGTCATTGGGCTGAAC+GGG 0.407822 1:-100092189 MsG0180006095.01.T01:CDS
TTGCTTTCAAAATATATTGT+TGG 0.409717 1:+100090608 None:intergenic
TCGAGTAAATAGGATCTTCA+TGG 0.411351 1:+100091904 None:intergenic
GTGGTGCTTTATCTTCATAA+TGG 0.412202 1:-100089368 MsG0180006095.01.T01:three_prime_UTR
TGCACTATCAGCAAAGATAC+TGG 0.413111 1:-100091763 MsG0180006095.01.T01:three_prime_UTR
AGGATGCCATCTCTTAGTTT+GGG 0.415342 1:+100091314 None:intergenic
AAAGAGTGTGACATAGATCT+TGG 0.419426 1:+100090117 None:intergenic
TTCCAGTCAACAAGAGTATG+AGG 0.422779 1:-100092431 MsG0180006095.01.T01:CDS
AGATTCTCTTAGCGGCTTGC+CGG 0.424930 1:-100093495 MsG0180006095.01.T01:five_prime_UTR
TGGTAGATCCAAAGGTTCAT+TGG 0.425796 1:+100092163 None:intergenic
TCTCAGAATTGCTGCTGCAC+AGG 0.425873 1:-100093237 MsG0180006095.01.T01:intron
GACTTCGATGGCGGCTAGTA+AGG 0.430028 1:-100093384 MsG0180006095.01.T01:exon
TTCTCTGCTTTCGGAGGCAA+TGG 0.431097 1:+100089684 None:intergenic
ACGGCTTTGGACCGGAGCTC+CGG 0.435983 1:+100093476 None:intergenic
GGTGAGAATGATATAGCAAA+TGG 0.438760 1:-100090221 MsG0180006095.01.T01:three_prime_UTR
TGACGGTAATATTGAATCAA+TGG 0.439352 1:-100091805 MsG0180006095.01.T01:three_prime_UTR
TGCCTCCGAAAGCAGAGAAA+TGG 0.439512 1:-100089680 MsG0180006095.01.T01:three_prime_UTR
AGTGACTTGTTCTGGTCAAA+TGG 0.440587 1:-100089854 MsG0180006095.01.T01:three_prime_UTR
AATTTGAAGGTTCTTGAAGC+AGG 0.442410 1:-100092394 MsG0180006095.01.T01:CDS
TCTTCTTGCAGATCATTTGA+CGG 0.442831 1:-100092224 MsG0180006095.01.T01:CDS
CGGCTTCTTTGCACCGGTCG+CGG 0.443569 1:-100093406 MsG0180006095.01.T01:five_prime_UTR
ATGAAACTTCTCCAACATAT+AGG 0.443787 1:+100090087 None:intergenic
GATATGAATGTCAACGGCTT+TGG 0.446430 1:+100093463 None:intergenic
TCCCGCCAACAACCACCAAC+AGG 0.446955 1:+100089941 None:intergenic
CAGTTCCTGAGACATGTCAT+TGG 0.447578 1:-100092199 MsG0180006095.01.T01:CDS
TTTCTAGATAGATGTTTGCT+AGG 0.449583 1:+100091419 None:intergenic
TTACTTCCTGAATTGATATC+GGG 0.451796 1:-100090646 MsG0180006095.01.T01:three_prime_UTR
GAATCTCGTAAGCCGTTTCA+CGG 0.452456 1:+100093512 None:intergenic
CGCACGAGACATTACTGAAC+TGG 0.453155 1:-100091363 MsG0180006095.01.T01:three_prime_UTR
TCGTGCGAGGACAGAAAGAA+TGG 0.454711 1:+100091379 None:intergenic
TGCAAAGAAGCCGCCGGTGC+CGG 0.457829 1:+100093416 None:intergenic
AAACTCCGGCGCATACTCTC+TGG 0.462485 1:-100092319 MsG0180006095.01.T01:CDS
TGGTTCCTGTTGGTGGTTGT+TGG 0.468761 1:-100089946 MsG0180006095.01.T01:three_prime_UTR
CTTCTTGCAGATCATTTGAC+GGG 0.472416 1:-100092223 MsG0180006095.01.T01:CDS
GAATGAGCTATCTCCGTTTG+TGG 0.472688 1:+100090352 None:intergenic
TCCGCAGCTGCTGCGGTGGA+AGG 0.474330 1:-100090182 MsG0180006095.01.T01:three_prime_UTR
CGCCGGAGTTTCTGTGCGGA+GGG 0.474615 1:+100092331 None:intergenic
TAGTCAGTGCAGGCATAGTC+GGG 0.474828 1:+100090461 None:intergenic
TTCCTGTTGGTGGTTGTTGG+CGG 0.475587 1:-100089943 MsG0180006095.01.T01:three_prime_UTR
CTCCACGTTGAGTCTGATGT+TGG 0.477628 1:-100091871 MsG0180006095.01.T01:three_prime_UTR
AGTTCCTGAGACATGTCATT+GGG 0.478732 1:-100092198 MsG0180006095.01.T01:CDS
TTAGCGGCTTGCCGGAGCTC+CGG 0.479239 1:-100093487 MsG0180006095.01.T01:five_prime_UTR
CTAGTCAGTGCAGGCATAGT+CGG 0.481645 1:+100090460 None:intergenic
TGCAGTGACGACTGGCGAAT+TGG 0.482095 1:-100093315 MsG0180006095.01.T01:CDS
TTGGTTGAGAAGAAATTTGA+AGG 0.483144 1:-100092407 MsG0180006095.01.T01:CDS
TTCTAGATAGATGTTTGCTA+GGG 0.483631 1:+100091420 None:intergenic
CAACTTACTAAGGAAATGTA+TGG 0.484943 1:-100089729 MsG0180006095.01.T01:three_prime_UTR
AACGACATTCCTTCACCGTT+CGG 0.485573 1:-100093568 None:intergenic
CTATACACTCACATAGTTGT+CGG 0.487505 1:+100090156 None:intergenic
TCCTCTAGCTGCCGGTGTTG+CGG 0.487690 1:-100091295 MsG0180006095.01.T01:three_prime_UTR
ATCAGCACTTCTATAGCATC+AGG 0.487980 1:+100091204 None:intergenic
GATTCTGCTGACAGCGAAGA+TGG 0.490563 1:-100091135 MsG0180006095.01.T01:three_prime_UTR
AAAACTGCATGCATGGATAT+GGG 0.490754 1:+100090667 None:intergenic
TTGCTAATCTTGTTAAGTCA+TGG 0.492772 1:-100091062 MsG0180006095.01.T01:three_prime_UTR
CTGACTAGGTGTTCAACAAA+AGG 0.492820 1:-100090445 MsG0180006095.01.T01:three_prime_UTR
ATGGAATGTGCGGATGTAAG+AGG 0.495806 1:+100092368 None:intergenic
CTCCATTTCTCTGCTTTCGG+AGG 0.497709 1:+100089678 None:intergenic
GGTAATTATTGAAGTAATGC+GGG 0.498219 1:-100089979 MsG0180006095.01.T01:three_prime_UTR
CGTTGAGTCTGATGTTGGGT+TGG 0.499715 1:-100091866 MsG0180006095.01.T01:three_prime_UTR
GGCTTACGAGATTCTCTTAG+CGG 0.499728 1:-100093503 MsG0180006095.01.T01:five_prime_UTR
AGTAAGGTGAAGAAAGCTCT+TGG 0.500244 1:-100093368 MsG0180006095.01.T01:CDS
TAGCTTCAGCTTCGTAAGGA+TGG 0.501774 1:+100091088 None:intergenic
GCACCGGTCGCGGACTTCGA+TGG 0.504461 1:-100093396 MsG0180006095.01.T01:exon
AACTCTGGCGTAGGCTACAT+CGG 0.504996 1:+100091702 None:intergenic
TTACATGGGTCTTATTTCGT+AGG 0.505328 1:-100092009 MsG0180006095.01.T01:CDS
TAGTCGGGATGAATGTATTA+CGG 0.506902 1:+100090476 None:intergenic
AATAAGCGTGCAGTGACGAC+TGG 0.507726 1:-100093323 MsG0180006095.01.T01:CDS
ATTGATTCCTAGCATAAGCC+AGG 0.508427 1:+100092054 None:intergenic
CAATATCTATAGGTTTCTCA+AGG 0.512886 1:+100092293 None:intergenic
CTTAGCAATTCTAATTCCAC+TGG 0.513535 1:-100090242 MsG0180006095.01.T01:three_prime_UTR
CTCCGTTTGTGGTACTAACA+AGG 0.513995 1:+100090363 None:intergenic
CACCGGCGGCTTCTTTGCAC+CGG 0.516157 1:-100093412 MsG0180006095.01.T01:five_prime_UTR
GCCCTTGTTAGTACCACAAA+CGG 0.517143 1:-100090365 MsG0180006095.01.T01:three_prime_UTR
ACCCCTCCGCACAGAAACTC+CGG 0.518443 1:-100092333 MsG0180006095.01.T01:CDS
TCCGTCCAATTTACCCTCAT+CGG 0.519485 1:-100093539 MsG0180006095.01.T01:five_prime_UTR
GTTGAGTCTGATGTTGGGTT+GGG 0.520313 1:-100091865 MsG0180006095.01.T01:three_prime_UTR
TGTTGGGTTGGGCAGAGAAA+AGG 0.520775 1:-100091854 MsG0180006095.01.T01:three_prime_UTR
ACCTTCCACCGCAGCAGCTG+CGG 0.521575 1:+100090181 None:intergenic
AAAATTCGCAGAAGTGTGTC+GGG 0.522700 1:+100089645 None:intergenic
TACCGTCATGGAAAGTATCA+TGG 0.524202 1:+100091820 None:intergenic
AGGAAGTAAAACTGCATGCA+TGG 0.525593 1:+100090660 None:intergenic
TTGATTCAATATTACCGTCA+TGG 0.526434 1:+100091808 None:intergenic
CGGAGAGGGAAATAGGGATC+CGG 0.527867 1:-100093435 MsG0180006095.01.T01:five_prime_UTR
CGACTATGCCTGCACTGACT+AGG 0.529213 1:-100090459 MsG0180006095.01.T01:three_prime_UTR
TCCACGTTGAGTCTGATGTT+GGG 0.529393 1:-100091870 MsG0180006095.01.T01:three_prime_UTR
TGCTATATCATTCTCACCAG+TGG 0.530817 1:+100090226 None:intergenic
TCAGCCCAATGACATGTCTC+AGG 0.531950 1:+100092194 None:intergenic
GCTTGGAAGACGCATGGAGT+TGG 0.534200 1:-100092500 MsG0180006095.01.T01:CDS
AAATAGGGATCCGGCACCGG+CGG 0.535472 1:-100093426 MsG0180006095.01.T01:five_prime_UTR
GTTGAACACCTAGTCAGTGC+AGG 0.535490 1:+100090451 None:intergenic
GTGAGAATGATATAGCAAAT+GGG 0.535875 1:-100090220 MsG0180006095.01.T01:three_prime_UTR
AAAGAGTTTGGTAGATCCAA+AGG 0.536803 1:+100092155 None:intergenic
TTTCTGTTCTCAATTTCCAC+AGG 0.537955 1:-100089482 MsG0180006095.01.T01:three_prime_UTR
TGGAAGACGCATGGAGTTGG+TGG 0.538833 1:-100092497 MsG0180006095.01.T01:CDS
AGCCTCATACTCTTGTTGAC+TGG 0.540703 1:+100092429 None:intergenic
CCGCCATCGAAGTCCGCGAC+CGG 0.543175 1:+100093393 None:intergenic
GAATGTCAACGGCTTTGGAC+CGG 0.543296 1:+100093468 None:intergenic
AGATGGCATCCTCTAGCTGC+CGG 0.546721 1:-100091303 MsG0180006095.01.T01:three_prime_UTR
TGCTCAAGTTCATGAAGGAA+AGG 0.547608 1:+100090050 None:intergenic
CTTTGGGACAGCCTATATGT+TGG 0.548075 1:-100090098 MsG0180006095.01.T01:three_prime_UTR
GGAGGATCTCCGAACGGTGA+AGG 0.548123 1:+100093559 None:intergenic
CTCATCGGAGCTCCGTGAAA+CGG 0.548439 1:-100093524 MsG0180006095.01.T01:five_prime_UTR
CAAAATTCGCAGAAGTGTGT+CGG 0.549438 1:+100089644 None:intergenic
TTGAAAGCAAAATCTGGCTG+TGG 0.549582 1:-100090595 MsG0180006095.01.T01:intron
GACCGGTGCAAAGAAGCCGC+CGG 0.550446 1:+100093410 None:intergenic
AAATCTGAAGTCTTGAACAG+TGG 0.551033 1:+100092454 None:intergenic
GCGCCGGAGTTTCTGTGCGG+AGG 0.552328 1:+100092330 None:intergenic
AGACATGTCATTGGGCTGAA+CGG 0.553541 1:-100092190 MsG0180006095.01.T01:CDS
ATTTGAAGGTTCTTGAAGCA+GGG 0.553583 1:-100092393 MsG0180006095.01.T01:CDS
TTGTTCTGGTCAAATGGAGA+TGG 0.554560 1:-100089848 MsG0180006095.01.T01:three_prime_UTR
TACTATGCAGCGTATTCGCA+TGG 0.556397 1:-100090300 MsG0180006095.01.T01:three_prime_UTR
CATTTCCATAACACACGTGA+AGG 0.556425 1:+100091265 None:intergenic
ATTATAGCTTCAGCTTCGTA+AGG 0.558396 1:+100091084 None:intergenic
CAAGGCGTGAAAATATCAAA+GGG 0.562901 1:+100089536 None:intergenic
TTTCAAAATATATTGTTGGA+TGG 0.563709 1:+100090612 None:intergenic
TCCGTTTGTGGTACTAACAA+GGG 0.563841 1:+100090364 None:intergenic
AAGAAGACCTGGCTTATGCT+AGG 0.565483 1:-100092061 MsG0180006095.01.T01:CDS
AGGGCATCATTCTTTACCTG+TGG 0.567093 1:+100089466 None:intergenic
GTGAGTCGATGCAAACCCTC+CGG 0.567652 1:-100092261 MsG0180006095.01.T01:CDS
AACAGTGGTATAAGCTCTAA+CGG 0.568625 1:+100092469 None:intergenic
ATTCATATCGCAGTCGGAGA+GGG 0.568785 1:-100093449 MsG0180006095.01.T01:five_prime_UTR
AAACATCAGAGTGGATAGAC+TGG 0.574255 1:-100091037 MsG0180006095.01.T01:three_prime_UTR
TACCATGATACTTTCCATGA+CGG 0.574910 1:-100091822 MsG0180006095.01.T01:three_prime_UTR
GAAGTGTGTCGGGTTCTCTA+GGG 0.576030 1:+100089655 None:intergenic
ACCGCAACACCGGCAGCTAG+AGG 0.576686 1:+100091294 None:intergenic
TGTTGGTGGTTGTTGGCGGG+AGG 0.577695 1:-100089939 MsG0180006095.01.T01:three_prime_UTR
AATAATGCTCAAGTTCATGA+AGG 0.578980 1:+100090045 None:intergenic
GGAAAGTATCATGGTAAGCA+AGG 0.579834 1:+100091829 None:intergenic
TAGAGCTCATTAAGAAGACC+TGG 0.580435 1:-100092072 MsG0180006095.01.T01:CDS
GCTGATGGCTGCGGACAAGT+TGG 0.581103 1:-100091187 MsG0180006095.01.T01:three_prime_UTR
CCATATATTTAGTTTCCGGA+AGG 0.583432 1:+100089390 None:intergenic
TCCGATGAGGGTAAATTGGA+CGG 0.583815 1:+100093538 None:intergenic
TATTTAGTTTCCGGAAGGAA+AGG 0.583829 1:+100089395 None:intergenic
GTCAACAAGAGTATGAGGCT+TGG 0.586605 1:-100092426 MsG0180006095.01.T01:CDS
CGTGCGAGGACAGAAAGAAT+GGG 0.587416 1:+100091380 None:intergenic
GCAAGGCGTGAAAATATCAA+AGG 0.588492 1:+100089535 None:intergenic
CGTAGAACTTGAACTGCAGA+AGG 0.590128 1:+100090727 None:intergenic
ACGTTTCATAGATGACACTT+TGG 0.592878 1:-100090707 MsG0180006095.01.T01:three_prime_UTR
AAAATAGCTTGGAAGACGCA+TGG 0.594063 1:-100092506 MsG0180006095.01.T01:intron
TTGGAGAAGTTTCATCCGCA+AGG 0.594451 1:-100090079 MsG0180006095.01.T01:three_prime_UTR
AAGGGTAGCAACCGCAACAC+CGG 0.596654 1:+100091284 None:intergenic
TGATGCTATAGAAGTGCTGA+TGG 0.598599 1:-100091202 MsG0180006095.01.T01:three_prime_UTR
TTGTGTATCTGTTTGAAACA+AGG 0.600327 1:+100089773 None:intergenic
GCCTTATTTAATGGAATGTG+CGG 0.602013 1:+100092358 None:intergenic
TGCATCCTGTAATCTGCTGG+AGG 0.602347 1:-100091948 MsG0180006095.01.T01:CDS
GGGTAATTATTGAAGTAATG+CGG 0.603016 1:-100089980 MsG0180006095.01.T01:three_prime_UTR
GGACAAGTTGGAGAAAGAGC+TGG 0.607835 1:-100091175 MsG0180006095.01.T01:three_prime_UTR
TATAGAAGTGCTGATGGCTG+CGG 0.612639 1:-100091196 MsG0180006095.01.T01:three_prime_UTR
GAAGAGAGATAACAATACTC+CGG 0.612686 1:+100092242 None:intergenic
TTTAGTCCCAAACTAAGAGA+TGG 0.612812 1:-100091320 MsG0180006095.01.T01:three_prime_UTR
TTCAACAAAAGGAAATATCA+CGG 0.614173 1:-100090434 MsG0180006095.01.T01:three_prime_UTR
AAATTATATATAACGAGGCA+AGG 0.614247 1:+100089518 None:intergenic
TGAAAGAGTTCTGCAACAAG+AGG 0.622241 1:-100091004 MsG0180006095.01.T01:intron
GTTTCACGGAGCTCCGATGA+GGG 0.623233 1:+100093526 None:intergenic
TGTGTATCTGTTTGAAACAA+GGG 0.625290 1:+100089774 None:intergenic
AGAGCTGGTGCAGATAGCAG+TGG 0.625341 1:-100091160 MsG0180006095.01.T01:three_prime_UTR
TGCATGATAAAGTTAGAACA+CGG 0.625894 1:-100090001 MsG0180006095.01.T01:three_prime_UTR
GAATCCACAGCCAAACAAAG+AGG 0.629394 1:-100090758 MsG0180006095.01.T01:three_prime_UTR
CATTCATATCGCAGTCGGAG+AGG 0.630228 1:-100093450 MsG0180006095.01.T01:five_prime_UTR
GCGTATTCGCATGGAATTAG+GGG 0.631044 1:-100090291 MsG0180006095.01.T01:three_prime_UTR
ATTGATGCGAACACACAGGT+GGG 0.633248 1:+100090322 None:intergenic
AGAGATAACAATACTCCGGA+GGG 0.633327 1:+100092246 None:intergenic
CCGGTCGCGGACTTCGATGG+CGG 0.634444 1:-100093393 MsG0180006095.01.T01:exon
AATCCACAGCCAAACAAAGA+GGG 0.637158 1:-100090757 MsG0180006095.01.T01:three_prime_UTR
CGTTTCACGGAGCTCCGATG+AGG 0.637203 1:+100093525 None:intergenic
TGAAACATGTGTGATTGAAG+AGG 0.638400 1:-100092107 MsG0180006095.01.T01:CDS
GAGAGATAACAATACTCCGG+AGG 0.640733 1:+100092245 None:intergenic
GCCGGAGTTTCTGTGCGGAG+GGG 0.641887 1:+100092332 None:intergenic
CAAGGGAAGTACATCTCGAA+CGG 0.642180 1:+100089791 None:intergenic
GACTGCGATATGAATGTCAA+CGG 0.643124 1:+100093457 None:intergenic
TCTGCTGACAGCGAAGATGG+TGG 0.643536 1:-100091132 MsG0180006095.01.T01:three_prime_UTR
GGGCTCCAGAGAGTATGCGC+CGG 0.644110 1:+100092314 None:intergenic
GTTCAGTAATGTCTCGTGCG+AGG 0.648386 1:+100091366 None:intergenic
TATTGATGCGAACACACAGG+TGG 0.649123 1:+100090321 None:intergenic
AGCCACAAATGACTCAGAGG+AGG 0.655658 1:-100090391 MsG0180006095.01.T01:three_prime_UTR
ATTTCCATAACACACGTGAA+GGG 0.656176 1:+100091266 None:intergenic
AAGGAAAGGCTCAATCCTTG+CGG 0.659468 1:+100090064 None:intergenic
TCCGGAAACTAAATATATGG+TGG 0.662301 1:-100089387 MsG0180006095.01.T01:three_prime_UTR
GCATGATAAAGTTAGAACAC+GGG 0.662574 1:-100090000 MsG0180006095.01.T01:three_prime_UTR
ATGGTTCTTCAGCTAAATCG+CGG 0.662847 1:-100089710 MsG0180006095.01.T01:three_prime_UTR
AATATCTATAGGTTTCTCAA+GGG 0.663208 1:+100092294 None:intergenic
GTTGACATTCATATCGCAGT+CGG 0.669762 1:-100093455 MsG0180006095.01.T01:five_prime_UTR
CCACTAAATTATATATAACG+AGG 0.670364 1:+100089513 None:intergenic
GGAAGTTGAGAAAGATACTG+AGG 0.674841 1:-100091927 MsG0180006095.01.T01:CDS
AAAAGCCACAAATGACTCAG+AGG 0.678635 1:-100090394 MsG0180006095.01.T01:three_prime_UTR
TAGTATTGATGCGAACACAC+AGG 0.689438 1:+100090318 None:intergenic
ACCCAACATCAGACTCAACG+TGG 0.693682 1:+100091869 None:intergenic
TGTGATTGAAGAGGTTGATG+AGG 0.699635 1:-100092098 MsG0180006095.01.T01:CDS
GTCATGGATAAACATCAGAG+TGG 0.701107 1:-100091046 MsG0180006095.01.T01:three_prime_UTR
TGAGAATGATATAGCAAATG+GGG 0.709777 1:-100090219 MsG0180006095.01.T01:three_prime_UTR
CATCAGAGTGGATAGACTGG+CGG 0.716521 1:-100091034 MsG0180006095.01.T01:three_prime_UTR
TTGATGCGAACACACAGGTG+GGG 0.725960 1:+100090323 None:intergenic
TTGGACGGAGGATCTCCGAA+CGG 0.730608 1:+100093553 None:intergenic
GATGAGGGTAAATTGGACGG+AGG 0.738327 1:+100093541 None:intergenic
AAGGCGTGAAAATATCAAAG+GGG 0.748723 1:+100089537 None:intergenic
TATGCGCCGGAGTTTCTGTG+CGG 0.779853 1:+100092327 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATGTTAAAAAAATACAAT+TGG - Chr1:100089744-100089763 MsG0180006095.01.T01:three_prime_UTR 10.0%
!! TATGTTAAAAAAATACAATT+GGG - Chr1:100089745-100089764 MsG0180006095.01.T01:three_prime_UTR 10.0%
!! ATATATATGATATAGTTTAG+TGG + Chr1:100089826-100089845 None:intergenic 15.0%
!! GCAAAAAAAATAAAAAACAA+AGG + Chr1:100092002-100092021 None:intergenic 15.0%
!! TATATATGATATAGTTTAGT+GGG + Chr1:100089825-100089844 None:intergenic 15.0%
!! TTAACCAAACAAAAATTAAA+GGG + Chr1:100093470-100093489 None:intergenic 15.0%
!! TTACAATTGACATTTATATA+TGG - Chr1:100091331-100091350 MsG0180006095.01.T01:three_prime_UTR 15.0%
!!! TTTTTAATCCTAATCATAAA+AGG + Chr1:100090288-100090307 None:intergenic 15.0%
!! AAGGAGAAAAAAAAAACAAA+CGG + Chr1:100090337-100090356 None:intergenic 20.0%
!! ATATATCTTTACTATCTGAA+AGG + Chr1:100091302-100091321 None:intergenic 20.0%
!! GTTAACCAAACAAAAATTAA+AGG + Chr1:100093471-100093490 None:intergenic 20.0%
!! TATGATTAGGATTAAAAATG+TGG - Chr1:100090290-100090309 MsG0180006095.01.T01:three_prime_UTR 20.0%
!! TTAGTGATTAATCATATGTA+AGG + Chr1:100090356-100090375 None:intergenic 20.0%
!! TTCATGATATTAAAATAGCT+TGG - Chr1:100090397-100090416 MsG0180006095.01.T01:three_prime_UTR 20.0%
!! TTGCTTTCAAAATATATTGT+TGG + Chr1:100092309-100092328 None:intergenic 20.0%
!! TTTCAAAATATATTGTTGGA+TGG + Chr1:100092305-100092324 None:intergenic 20.0%
!!! ACTCTTTTTAATCTCTTTTA+AGG - Chr1:100091451-100091470 MsG0180006095.01.T01:intron 20.0%
!!! ATTTTTGTTTGGTTAACTAT+AGG - Chr1:100093474-100093493 MsG0180006095.01.T01:five_prime_UTR 20.0%
!!! GCATAATATTTGTTTTACAT+GGG - Chr1:100090891-100090910 MsG0180006095.01.T01:intron 20.0%
!!! TATATTTTGAAAGCAAAATC+TGG - Chr1:100092313-100092332 MsG0180006095.01.T01:CDS 20.0%
!!! TCAATTTGTTAGAATTTTGT+AGG + Chr1:100093350-100093369 None:intergenic 20.0%
!!! TCTAATATAATTTTCAACTC+TGG + Chr1:100091230-100091249 None:intergenic 20.0%
!!! TGCATAATATTTGTTTTACA+TGG - Chr1:100090890-100090909 MsG0180006095.01.T01:intron 20.0%
! AAATTATATATAACGAGGCA+AGG + Chr1:100093399-100093418 None:intergenic 25.0%
! AATATCTATAGGTTTCTCAA+GGG + Chr1:100090623-100090642 None:intergenic 25.0%
! AGGAGAAAAAAAAAACAAAC+GGG + Chr1:100090336-100090355 None:intergenic 25.0%
! CAATATCTTAAATCATCAGA+AGG + Chr1:100092024-100092043 None:intergenic 25.0%
! CCACTAAATTATATATAACG+AGG + Chr1:100093404-100093423 None:intergenic 25.0%
! CCTCGTTATATATAATTTAG+TGG - Chr1:100093401-100093420 MsG0180006095.01.T01:five_prime_UTR 25.0%
! GAGTTGAAGAAATATGTTAA+AGG - Chr1:100091671-100091690 MsG0180006095.01.T01:three_prime_UTR 25.0%
! GATAATCTCATGAGTATAAT+CGG - Chr1:100091179-100091198 MsG0180006095.01.T01:three_prime_UTR 25.0%
! TATAAGACTACAATGTAACT+AGG - Chr1:100090044-100090063 MsG0180006095.01.T01:three_prime_UTR 25.0%
! TGGTGGAAAATCTATTATAA+TGG - Chr1:100091799-100091818 MsG0180006095.01.T01:three_prime_UTR 25.0%
! TTCAACAAAAGGAAATATCA+CGG - Chr1:100092480-100092499 MsG0180006095.01.T01:CDS 25.0%
! TTTACTTCCTGAATTGATAT+CGG - Chr1:100092267-100092286 MsG0180006095.01.T01:CDS 25.0%
! TTTATTACTATTTCAGTCAG+TGG + Chr1:100091370-100091389 None:intergenic 25.0%
!! GCAAGTTGTAATTCTTTTTA+AGG + Chr1:100093328-100093347 None:intergenic 25.0%
!! TCATTCATCCTTTTATGATT+AGG - Chr1:100090277-100090296 MsG0180006095.01.T01:three_prime_UTR 25.0%
!!! GTAATTCTTTTTAAGGAACT+TGG + Chr1:100093321-100093340 None:intergenic 25.0%
!!! TACATTGTAGTCTTATAATC+AGG + Chr1:100090041-100090060 None:intergenic 25.0%
!!! TAGCTTTAATAGTACTAAAC+CGG - Chr1:100089869-100089888 MsG0180006095.01.T01:three_prime_UTR 25.0%
!!! TTAGTTGTTTTGCTCTATTA+TGG - Chr1:100091390-100091409 MsG0180006095.01.T01:three_prime_UTR 25.0%
AAAGAGTTAAGCCATATGAA+TGG + Chr1:100091438-100091457 None:intergenic 30.0%
AAATACAATTGGGTTTCAAC+TGG - Chr1:100089755-100089774 MsG0180006095.01.T01:three_prime_UTR 30.0%
AATAATGCTCAAGTTCATGA+AGG + Chr1:100092872-100092891 None:intergenic 30.0%
ATCACTAATGATAGCTTACT+AGG - Chr1:100090368-100090387 MsG0180006095.01.T01:three_prime_UTR 30.0%
ATGAAACTTCTCCAACATAT+AGG + Chr1:100092830-100092849 None:intergenic 30.0%
CAACTTACTAAGGAAATGTA+TGG - Chr1:100093185-100093204 MsG0180006095.01.T01:intron 30.0%
CAATATCTATAGGTTTCTCA+AGG + Chr1:100090624-100090643 None:intergenic 30.0%
CACAAACAAGCAATAAAAGA+AGG + Chr1:100090208-100090227 None:intergenic 30.0%
GCAATTTAGTCAACTTACTA+AGG - Chr1:100093175-100093194 MsG0180006095.01.T01:intron 30.0%
GGAATTAGAATTGCTAAGAT+TGG + Chr1:100092670-100092689 None:intergenic 30.0%
GGGTAATTATTGAAGTAATG+CGG - Chr1:100092934-100092953 MsG0180006095.01.T01:intron 30.0%
GGTAATTATTGAAGTAATGC+GGG - Chr1:100092935-100092954 MsG0180006095.01.T01:intron 30.0%
GTGAGAATGATATAGCAAAT+GGG - Chr1:100092694-100092713 MsG0180006095.01.T01:intron 30.0%
TGACGGTAATATTGAATCAA+TGG - Chr1:100091109-100091128 MsG0180006095.01.T01:three_prime_UTR 30.0%
TGAGAATGATATAGCAAATG+GGG - Chr1:100092695-100092714 MsG0180006095.01.T01:intron 30.0%
TGCAGGTAATAACAAAGTAA+TGG + Chr1:100092057-100092076 None:intergenic 30.0%
TGCATGATAAAGTTAGAACA+CGG - Chr1:100092913-100092932 MsG0180006095.01.T01:intron 30.0%
TTACTTCCTGAATTGATATC+GGG - Chr1:100092268-100092287 MsG0180006095.01.T01:CDS 30.0%
TTGAGTTAAGTTAATTCTCC+AGG - Chr1:100090089-100090108 MsG0180006095.01.T01:three_prime_UTR 30.0%
TTGATTCAATATTACCGTCA+TGG + Chr1:100091109-100091128 None:intergenic 30.0%
TTGCTAATCTTGTTAAGTCA+TGG - Chr1:100091852-100091871 MsG0180006095.01.T01:three_prime_UTR 30.0%
TTGGTTGAGAAGAAATTTGA+AGG - Chr1:100090507-100090526 MsG0180006095.01.T01:intron 30.0%
TTTCTAGATAGATGTTTGCT+AGG + Chr1:100091498-100091517 None:intergenic 30.0%
! AACAAGCTTCTAAAAGAGTT+TGG + Chr1:100090774-100090793 None:intergenic 30.0%
! ACCACCATATATTTAGTTTC+CGG + Chr1:100093531-100093550 None:intergenic 30.0%
! AGCACTAGTTCTCTATTAAA+AGG + Chr1:100090015-100090034 None:intergenic 30.0%
! AGCTTTAATAGTACTAAACC+GGG - Chr1:100089870-100089889 MsG0180006095.01.T01:three_prime_UTR 30.0%
! CTGCTATTTGCAATATCTAT+AGG + Chr1:100090634-100090653 None:intergenic 30.0%
! CTTCTTTTATTGCTTGTTTG+TGG - Chr1:100090206-100090225 MsG0180006095.01.T01:three_prime_UTR 30.0%
! GAGTTAAGGGTTTAAGTTTA+AGG - Chr1:100089916-100089935 MsG0180006095.01.T01:three_prime_UTR 30.0%
! GCAAGATTCTTTTGTATTAG+AGG - Chr1:100093020-100093039 MsG0180006095.01.T01:intron 30.0%
! TCTTAGTTTGGGACTAAATA+TGG + Chr1:100091592-100091611 None:intergenic 30.0%
! TGTGTATCTGTTTGAAACAA+GGG + Chr1:100093143-100093162 None:intergenic 30.0%
! TTCTAGATAGATGTTTGCTA+GGG + Chr1:100091497-100091516 None:intergenic 30.0%
! TTGTGTATCTGTTTGAAACA+AGG + Chr1:100093144-100093163 None:intergenic 30.0%
!! GATGCCCTTTAATTTTTGTT+TGG - Chr1:100093463-100093482 MsG0180006095.01.T01:five_prime_UTR 30.0%
!! GTTTAAGTTTAAGGTGTTGA+AGG - Chr1:100089925-100089944 MsG0180006095.01.T01:three_prime_UTR 30.0%
!!! AGACTGCTTTTTGATTAACT+CGG + Chr1:100093100-100093119 None:intergenic 30.0%
!!! ATCTCTTTTAAGGCAGAAAT+TGG - Chr1:100091461-100091480 MsG0180006095.01.T01:intron 30.0%
!!! GCATTTTAGTTGGAATTTTG+TGG - Chr1:100089794-100089813 MsG0180006095.01.T01:three_prime_UTR 30.0%
AAAACTGCATGCATGGATAT+GGG + Chr1:100092250-100092269 None:intergenic 35.0%
AAAGAGTTTGGTAGATCCAA+AGG + Chr1:100090762-100090781 None:intergenic 35.0%
AAGATCTATGTCACACTCTT+TGG - Chr1:100092799-100092818 MsG0180006095.01.T01:intron 35.0%
AAGGCAGAAATTGGAGAAAA+TGG - Chr1:100091470-100091489 MsG0180006095.01.T01:intron 35.0%
AAGGCGTGAAAATATCAAAG+GGG + Chr1:100093380-100093399 None:intergenic 35.0%
AATTTGAAGGTTCTTGAAGC+AGG - Chr1:100090520-100090539 MsG0180006095.01.T01:intron 35.0%
ACGTTTCATAGATGACACTT+TGG - Chr1:100092207-100092226 MsG0180006095.01.T01:CDS 35.0%
AGATCTATGTCACACTCTTT+GGG - Chr1:100092800-100092819 MsG0180006095.01.T01:intron 35.0%
AGGGGAAAAACTAGTCATAA+AGG + Chr1:100092397-100092416 None:intergenic 35.0%
ATATGAATGGCACCAAAAAC+AGG + Chr1:100091425-100091444 None:intergenic 35.0%
ATTATAGCTTCAGCTTCGTA+AGG + Chr1:100091833-100091852 None:intergenic 35.0%
ATTCGTCTGAGTTTGAACTT+AGG + Chr1:100089955-100089974 None:intergenic 35.0%
ATTTCCATAACACACGTGAA+GGG + Chr1:100091651-100091670 None:intergenic 35.0%
ATTTGAAGGTTCTTGAAGCA+GGG - Chr1:100090521-100090540 MsG0180006095.01.T01:intron 35.0%
CAAGGCGTGAAAATATCAAA+GGG + Chr1:100093381-100093400 None:intergenic 35.0%
CCTTCCGGAAACTAAATATA+TGG - Chr1:100093524-100093543 MsG0180006095.01.T01:five_prime_UTR 35.0%
CTATACACTCACATAGTTGT+CGG + Chr1:100092761-100092780 None:intergenic 35.0%
CTTAGCAATTCTAATTCCAC+TGG - Chr1:100092672-100092691 MsG0180006095.01.T01:intron 35.0%
CTTTAATAGTACTAAACCGG+GGG - Chr1:100089872-100089891 MsG0180006095.01.T01:three_prime_UTR 35.0%
GAAGAGAGATAACAATACTC+CGG + Chr1:100090675-100090694 None:intergenic 35.0%
GCATGATAAAGTTAGAACAC+GGG - Chr1:100092914-100092933 MsG0180006095.01.T01:intron 35.0%
GCTTTAATAGTACTAAACCG+GGG - Chr1:100089871-100089890 MsG0180006095.01.T01:three_prime_UTR 35.0%
GGGGAAAAACTAGTCATAAA+GGG + Chr1:100092396-100092415 None:intergenic 35.0%
GGTGAGAATGATATAGCAAA+TGG - Chr1:100092693-100092712 MsG0180006095.01.T01:intron 35.0%
GTGGTGCTTTATCTTCATAA+TGG - Chr1:100093546-100093565 MsG0180006095.01.T01:five_prime_UTR 35.0%
TAAAACTGCATGCATGGATA+TGG + Chr1:100092251-100092270 None:intergenic 35.0%
TACCATGATACTTTCCATGA+CGG - Chr1:100091092-100091111 MsG0180006095.01.T01:three_prime_UTR 35.0%
TAGTCGGGATGAATGTATTA+CGG + Chr1:100092441-100092460 None:intergenic 35.0%
TCCGCACATTCCATTAAATA+AGG - Chr1:100090555-100090574 MsG0180006095.01.T01:intron 35.0%
TCCGGAAACTAAATATATGG+TGG - Chr1:100093527-100093546 MsG0180006095.01.T01:five_prime_UTR 35.0%
TCGAGTAAATAGGATCTTCA+TGG + Chr1:100091013-100091032 None:intergenic 35.0%
TCTTCTTGCAGATCATTTGA+CGG - Chr1:100090690-100090709 MsG0180006095.01.T01:three_prime_UTR 35.0%
TGAAACATGTGTGATTGAAG+AGG - Chr1:100090807-100090826 MsG0180006095.01.T01:intron 35.0%
TTTAATAGTACTAAACCGGG+GGG - Chr1:100089873-100089892 MsG0180006095.01.T01:three_prime_UTR 35.0%
TTTAGTCCCAAACTAAGAGA+TGG - Chr1:100091594-100091613 MsG0180006095.01.T01:intron 35.0%
TTTCTGTTCTCAATTTCCAC+AGG - Chr1:100093432-100093451 MsG0180006095.01.T01:five_prime_UTR 35.0%
! AAAGAGTGTGACATAGATCT+TGG + Chr1:100092800-100092819 None:intergenic 35.0%
! AAATCTGAAGTCTTGAACAG+TGG + Chr1:100090463-100090482 None:intergenic 35.0%
! AACAGTGGTATAAGCTCTAA+CGG + Chr1:100090448-100090467 None:intergenic 35.0%
! ATAATTTTCAACTCTGGCGT+AGG + Chr1:100091224-100091243 None:intergenic 35.0%
! CCATATATTTAGTTTCCGGA+AGG + Chr1:100093527-100093546 None:intergenic 35.0%
! CTCAAAGCTTTCGAGTAAAT+AGG + Chr1:100091023-100091042 None:intergenic 35.0%
! TATTTAGTTTCCGGAAGGAA+AGG + Chr1:100093522-100093541 None:intergenic 35.0%
! TGGCGTTAATTACCTGTTTT+TGG - Chr1:100091410-100091429 MsG0180006095.01.T01:three_prime_UTR 35.0%
! TTCTGCGAATTTTGTGTTAC+AGG - Chr1:100093279-100093298 MsG0180006095.01.T01:CDS 35.0%
! TTTGTGGCTTTTCCTTTTTC+CGG + Chr1:100092512-100092531 None:intergenic 35.0%
!! GCCTTATTTAATGGAATGTG+CGG + Chr1:100090559-100090578 None:intergenic 35.0%
!! TGAAGTGTACACTTTTCAAG+CGG + Chr1:100090260-100090279 None:intergenic 35.0%
!! TTACATGGGTCTTATTTCGT+AGG - Chr1:100090905-100090924 MsG0180006095.01.T01:intron 35.0%
!!! AATTAGGGGTTTTGGAAAAG+AGG - Chr1:100092637-100092656 MsG0180006095.01.T01:intron 35.0%
!!! ACTAGTTTTTCCCCTTCTTA+TGG - Chr1:100092402-100092421 MsG0180006095.01.T01:CDS 35.0%
!!! CTTTTTTCTTCCTTTCCTTC+CGG - Chr1:100093509-100093528 MsG0180006095.01.T01:five_prime_UTR 35.0%
!!! TGTGTTGACTGCATTTTAGT+TGG - Chr1:100089784-100089803 MsG0180006095.01.T01:three_prime_UTR 35.0%
!!! TGTTTTTGGTGCCATTCATA+TGG - Chr1:100091424-100091443 MsG0180006095.01.T01:three_prime_UTR 35.0%
AAAAGCCACAAATGACTCAG+AGG - Chr1:100092520-100092539 MsG0180006095.01.T01:intron 40.0%
AAAATAGCTTGGAAGACGCA+TGG - Chr1:100090408-100090427 MsG0180006095.01.T01:three_prime_UTR 40.0%
AAACATCAGAGTGGATAGAC+TGG - Chr1:100091877-100091896 MsG0180006095.01.T01:exon 40.0%
AATAATACCCATGAGGTCCA+AGG + Chr1:100090121-100090140 None:intergenic 40.0%
AATCCACAGCCAAACAAAGA+GGG - Chr1:100092157-100092176 MsG0180006095.01.T01:CDS 40.0%
AATTCTCCAGGTTTGAACCT+TGG - Chr1:100090101-100090120 MsG0180006095.01.T01:three_prime_UTR 40.0%
AGAGATAACAATACTCCGGA+GGG + Chr1:100090671-100090690 None:intergenic 40.0%
AGCGTATTCGCATGGAATTA+GGG - Chr1:100092622-100092641 MsG0180006095.01.T01:intron 40.0%
AGGAAGTAAAACTGCATGCA+TGG + Chr1:100092257-100092276 None:intergenic 40.0%
AGGATGCCATCTCTTAGTTT+GGG + Chr1:100091603-100091622 None:intergenic 40.0%
AGTAAGGTGAAGAAAGCTCT+TGG - Chr1:100089546-100089565 MsG0180006095.01.T01:three_prime_UTR 40.0%
AGTTCCTGAGACATGTCATT+GGG - Chr1:100090716-100090735 MsG0180006095.01.T01:three_prime_UTR 40.0%
ATCAGCACTTCTATAGCATC+AGG + Chr1:100091713-100091732 None:intergenic 40.0%
ATGGTTCTTCAGCTAAATCG+CGG - Chr1:100093204-100093223 MsG0180006095.01.T01:intron 40.0%
CATTTCCATAACACACGTGA+AGG + Chr1:100091652-100091671 None:intergenic 40.0%
CCCTGTATAGACCATAAGAA+GGG + Chr1:100092416-100092435 None:intergenic 40.0%
CCCTTCTTATGGTCTATACA+GGG - Chr1:100092413-100092432 MsG0180006095.01.T01:CDS 40.0%
CCTGTATAGACCATAAGAAG+GGG + Chr1:100092415-100092434 None:intergenic 40.0%
CTGACTAGGTGTTCAACAAA+AGG - Chr1:100092469-100092488 MsG0180006095.01.T01:CDS 40.0%
CTGCACATAAACATGGTTGT+TGG - Chr1:100092077-100092096 MsG0180006095.01.T01:CDS 40.0%
CTTCTTGCAGATCATTTGAC+GGG - Chr1:100090691-100090710 MsG0180006095.01.T01:three_prime_UTR 40.0%
GACTGCGATATGAATGTCAA+CGG + Chr1:100089460-100089479 None:intergenic 40.0%
GATATGAATGTCAACGGCTT+TGG + Chr1:100089454-100089473 None:intergenic 40.0%
GCAAGGCGTGAAAATATCAA+AGG + Chr1:100093382-100093401 None:intergenic 40.0%
GGAAATATCACGGTGTATTC+CGG - Chr1:100092490-100092509 MsG0180006095.01.T01:CDS 40.0%
GGAAGTTGAGAAAGATACTG+AGG - Chr1:100090987-100091006 MsG0180006095.01.T01:intron 40.0%
GTCATGGATAAACATCAGAG+TGG - Chr1:100091868-100091887 MsG0180006095.01.T01:three_prime_UTR 40.0%
GTTGACATTCATATCGCAGT+CGG - Chr1:100089459-100089478 MsG0180006095.01.T01:three_prime_UTR 40.0%
TAGAGCTCATTAAGAAGACC+TGG - Chr1:100090842-100090861 MsG0180006095.01.T01:intron 40.0%
TCAAGACCCGATATCAATTC+AGG + Chr1:100092277-100092296 None:intergenic 40.0%
TCCCTGTATAGACCATAAGA+AGG + Chr1:100092417-100092436 None:intergenic 40.0%
TCCGTTTGTGGTACTAACAA+GGG + Chr1:100092553-100092572 None:intergenic 40.0%
TGAAAGAGTTCTGCAACAAG+AGG - Chr1:100091910-100091929 MsG0180006095.01.T01:CDS 40.0%
TGCACTATCAGCAAAGATAC+TGG - Chr1:100091151-100091170 MsG0180006095.01.T01:three_prime_UTR 40.0%
TGCTATATCATTCTCACCAG+TGG + Chr1:100092691-100092710 None:intergenic 40.0%
TGCTCAAGTTCATGAAGGAA+AGG + Chr1:100092867-100092886 None:intergenic 40.0%
TGGTAGATCCAAAGGTTCAT+TGG + Chr1:100090754-100090773 None:intergenic 40.0%
TTACAGTAACAGATGAGCTG+AGG + Chr1:100090155-100090174 None:intergenic 40.0%
TTGAAAGCAAAATCTGGCTG+TGG - Chr1:100092319-100092338 MsG0180006095.01.T01:CDS 40.0%
TTGTTCTGGTCAAATGGAGA+TGG - Chr1:100093066-100093085 MsG0180006095.01.T01:intron 40.0%
! AAAATTCGCAGAAGTGTGTC+GGG + Chr1:100093272-100093291 None:intergenic 40.0%
! AGCTCAACGTGTTTGAGTTA+AGG - Chr1:100089902-100089921 MsG0180006095.01.T01:three_prime_UTR 40.0%
! ATTGATTCCTAGCATAAGCC+AGG + Chr1:100090863-100090882 None:intergenic 40.0%
! CAAAATTCGCAGAAGTGTGT+CGG + Chr1:100093273-100093292 None:intergenic 40.0%
! CCTCATGGGTATTATTTCTC+CGG - Chr1:100090125-100090144 MsG0180006095.01.T01:three_prime_UTR 40.0%
! GCTCAACGTGTTTGAGTTAA+GGG - Chr1:100089903-100089922 MsG0180006095.01.T01:three_prime_UTR 40.0%
! TTCCAGTCAACAAGAGTATG+AGG - Chr1:100090483-100090502 MsG0180006095.01.T01:three_prime_UTR 40.0%
! TTTTGCATCCTGTAATCTGC+TGG - Chr1:100090963-100090982 MsG0180006095.01.T01:intron 40.0%
!! AGTGACTTGTTCTGGTCAAA+TGG - Chr1:100093060-100093079 MsG0180006095.01.T01:intron 40.0%
!! CATTACTGAACTGGCTTTCA+AGG - Chr1:100091560-100091579 MsG0180006095.01.T01:intron 40.0%
!! CTTCTTTTGATGGTTCCTGT+TGG - Chr1:100092958-100092977 MsG0180006095.01.T01:intron 40.0%
!! GGAAAGTATCATGGTAAGCA+AGG + Chr1:100091088-100091107 None:intergenic 40.0%
!! TACCGTCATGGAAAGTATCA+TGG + Chr1:100091097-100091116 None:intergenic 40.0%
!! TAGTATTGATGCGAACACAC+AGG + Chr1:100092599-100092618 None:intergenic 40.0%
!! TGATGCTATAGAAGTGCTGA+TGG - Chr1:100091712-100091731 MsG0180006095.01.T01:three_prime_UTR 40.0%
!! TGCTTTTTGATTAACTCGGC+TGG + Chr1:100093096-100093115 None:intergenic 40.0%
!! TGTGATTGAAGAGGTTGATG+AGG - Chr1:100090816-100090835 MsG0180006095.01.T01:intron 40.0%
AACTTCCTCCAGCAGATTAC+AGG + Chr1:100090974-100090993 None:intergenic 45.0%
AAGAAGACCTGGCTTATGCT+AGG - Chr1:100090853-100090872 MsG0180006095.01.T01:intron 45.0%
AAGGAAAGGCTCAATCCTTG+CGG + Chr1:100092853-100092872 None:intergenic 45.0%
ACCATGTTTATGTGCAGTGC+AGG + Chr1:100092074-100092093 None:intergenic 45.0%
ACCTGCACTGCACATAAACA+TGG - Chr1:100092070-100092089 MsG0180006095.01.T01:CDS 45.0%
ACGGGTTTCCAATGAACCTT+TGG - Chr1:100090743-100090762 MsG0180006095.01.T01:three_prime_UTR 45.0%
ACTTCACCATCCTTTCCTAC+AGG - Chr1:100092129-100092148 MsG0180006095.01.T01:CDS 45.0%
AGACATGTCATTGGGCTGAA+CGG - Chr1:100090724-100090743 MsG0180006095.01.T01:three_prime_UTR 45.0%
AGCCTCATACTCTTGTTGAC+TGG + Chr1:100090488-100090507 None:intergenic 45.0%
ATGGAATGTGCGGATGTAAG+AGG + Chr1:100090549-100090568 None:intergenic 45.0%
ATTCATATCGCAGTCGGAGA+GGG - Chr1:100089465-100089484 MsG0180006095.01.T01:three_prime_UTR 45.0%
ATTGATGCGAACACACAGGT+GGG + Chr1:100092595-100092614 None:intergenic 45.0%
CAGCGTATTCGCATGGAATT+AGG - Chr1:100092621-100092640 MsG0180006095.01.T01:intron 45.0%
CAGTTCCTGAGACATGTCAT+TGG - Chr1:100090715-100090734 MsG0180006095.01.T01:three_prime_UTR 45.0%
CCCCTTCTTATGGTCTATAC+AGG - Chr1:100092412-100092431 MsG0180006095.01.T01:CDS 45.0%
CCGGAGAAATAATACCCATG+AGG + Chr1:100090128-100090147 None:intergenic 45.0%
CGTAGAACTTGAACTGCAGA+AGG + Chr1:100092190-100092209 None:intergenic 45.0%
CGTCTGAGTTTGAACTTAGG+AGG + Chr1:100089952-100089971 None:intergenic 45.0%
CTCCGTTTGTGGTACTAACA+AGG + Chr1:100092554-100092573 None:intergenic 45.0%
GAATCCACAGCCAAACAAAG+AGG - Chr1:100092156-100092175 MsG0180006095.01.T01:CDS 45.0%
GAATCTCGTAAGCCGTTTCA+CGG + Chr1:100089405-100089424 None:intergenic 45.0%
GAATGAGCTATCTCCGTTTG+TGG + Chr1:100092565-100092584 None:intergenic 45.0%
GAGAGATAACAATACTCCGG+AGG + Chr1:100090672-100090691 None:intergenic 45.0%
GAGGATGCCATCTCTTAGTT+TGG + Chr1:100091604-100091623 None:intergenic 45.0%
GCCCTTGTTAGTACCACAAA+CGG - Chr1:100092549-100092568 MsG0180006095.01.T01:intron 45.0%
GCGTATTCGCATGGAATTAG+GGG - Chr1:100092623-100092642 MsG0180006095.01.T01:intron 45.0%
GGCTTACGAGATTCTCTTAG+CGG - Chr1:100089411-100089430 MsG0180006095.01.T01:three_prime_UTR 45.0%
GTTGAGTCTGATGTTGGGTT+GGG - Chr1:100091049-100091068 MsG0180006095.01.T01:three_prime_UTR 45.0%
GTTTGAACCTTGGACCTCAT+GGG - Chr1:100090111-100090130 MsG0180006095.01.T01:three_prime_UTR 45.0%
TACTATGCAGCGTATTCGCA+TGG - Chr1:100092614-100092633 MsG0180006095.01.T01:intron 45.0%
TAGCTTCAGCTTCGTAAGGA+TGG + Chr1:100091829-100091848 None:intergenic 45.0%
TATTGATGCGAACACACAGG+TGG + Chr1:100092596-100092615 None:intergenic 45.0%
TCACGGTGTATTCCGGAAAA+AGG - Chr1:100092497-100092516 MsG0180006095.01.T01:CDS 45.0%
TCCACGTTGAGTCTGATGTT+GGG - Chr1:100091044-100091063 MsG0180006095.01.T01:three_prime_UTR 45.0%
TCCGATGAGGGTAAATTGGA+CGG + Chr1:100089379-100089398 None:intergenic 45.0%
TCCGTCCAATTTACCCTCAT+CGG - Chr1:100089375-100089394 MsG0180006095.01.T01:three_prime_UTR 45.0%
TTCCTCCTCTGAGTCATTTG+TGG + Chr1:100092528-100092547 None:intergenic 45.0%
TTGGAGAAGTTTCATCCGCA+AGG - Chr1:100092835-100092854 MsG0180006095.01.T01:intron 45.0%
! ACTGCAGTCTGTTTTCACTC+AGG - Chr1:100091255-100091274 MsG0180006095.01.T01:three_prime_UTR 45.0%
! AGGGCATCATTCTTTACCTG+TGG + Chr1:100093451-100093470 None:intergenic 45.0%
! CAAGGGAAGTACATCTCGAA+CGG + Chr1:100093126-100093145 None:intergenic 45.0%
! GTAATGCGGGCTTCTTTTGA+TGG - Chr1:100092948-100092967 MsG0180006095.01.T01:intron 45.0%
! GTCAACAAGAGTATGAGGCT+TGG - Chr1:100090488-100090507 MsG0180006095.01.T01:intron 45.0%
! TCGCATGGAATTAGGGGTTT+TGG - Chr1:100092629-100092648 MsG0180006095.01.T01:intron 45.0%
!! AGCTTCTGAGTGACTTGTTC+TGG - Chr1:100093052-100093071 MsG0180006095.01.T01:intron 45.0%
!! AGTGTACACTTTTCAAGCGG+TGG + Chr1:100090257-100090276 None:intergenic 45.0%
!! CTTTGGGACAGCCTATATGT+TGG - Chr1:100092816-100092835 MsG0180006095.01.T01:intron 45.0%
!! CTTTTGATGGTTCCTGTTGG+TGG - Chr1:100092961-100092980 MsG0180006095.01.T01:intron 45.0%
!! GAGGGGTCTGCCTTATTTAA+TGG + Chr1:100090568-100090587 None:intergenic 45.0%
!! GTGTACACTTTTCAAGCGGT+GGG + Chr1:100090256-100090275 None:intergenic 45.0%
!! TATAGAAGTGCTGATGGCTG+CGG - Chr1:100091718-100091737 MsG0180006095.01.T01:three_prime_UTR 45.0%
AACTCTGGCGTAGGCTACAT+CGG + Chr1:100091215-100091234 None:intergenic 50.0%
AATAAGCGTGCAGTGACGAC+TGG - Chr1:100089591-100089610 MsG0180006095.01.T01:three_prime_UTR 50.0%
ACAGATGAGCTGAGGAACAC+CGG + Chr1:100090147-100090166 None:intergenic 50.0%
ACCATCCTTTCCTACAGGCA+TGG - Chr1:100092134-100092153 MsG0180006095.01.T01:CDS 50.0%
ACCCAACATCAGACTCAACG+TGG + Chr1:100091048-100091067 None:intergenic 50.0%
AGATTCTCTTAGCGGCTTGC+CGG - Chr1:100089419-100089438 MsG0180006095.01.T01:three_prime_UTR 50.0%
AGCCACAAATGACTCAGAGG+AGG - Chr1:100092523-100092542 MsG0180006095.01.T01:intron 50.0%
AGTGGATAGACTGGCGGAAT+TGG - Chr1:100091886-100091905 MsG0180006095.01.T01:exon 50.0%
CATCAGAGTGGATAGACTGG+CGG - Chr1:100091880-100091899 MsG0180006095.01.T01:exon 50.0%
CATTCATATCGCAGTCGGAG+AGG - Chr1:100089464-100089483 MsG0180006095.01.T01:three_prime_UTR 50.0%
CGCACGAGACATTACTGAAC+TGG - Chr1:100091551-100091570 MsG0180006095.01.T01:intron 50.0%
CGTGCGAGGACAGAAAGAAT+GGG + Chr1:100091537-100091556 None:intergenic 50.0%
CGTTGAGTCTGATGTTGGGT+TGG - Chr1:100091048-100091067 MsG0180006095.01.T01:three_prime_UTR 50.0%
CTAGTCAGTGCAGGCATAGT+CGG + Chr1:100092457-100092476 None:intergenic 50.0%
CTCCACGTTGAGTCTGATGT+TGG - Chr1:100091043-100091062 MsG0180006095.01.T01:three_prime_UTR 50.0%
CTCCATTTCTCTGCTTTCGG+AGG + Chr1:100093239-100093258 None:intergenic 50.0%
GAAGTGTGTCGGGTTCTCTA+GGG + Chr1:100093262-100093281 None:intergenic 50.0%
GACATGTCATTGGGCTGAAC+GGG - Chr1:100090725-100090744 MsG0180006095.01.T01:three_prime_UTR 50.0%
GAGCTCCGATGAGGGTAAAT+TGG + Chr1:100089383-100089402 None:intergenic 50.0%
GATGAGGGTAAATTGGACGG+AGG + Chr1:100089376-100089395 None:intergenic 50.0%
GATTCTGCTGACAGCGAAGA+TGG - Chr1:100091779-100091798 MsG0180006095.01.T01:three_prime_UTR 50.0%
GCTACCCTTCACGTGTGTTA+TGG - Chr1:100091644-100091663 MsG0180006095.01.T01:intron 50.0%
GGAGCAAAGCCCTCTTTGTT+TGG + Chr1:100092169-100092188 None:intergenic 50.0%
GGATTCCATGCCTGTAGGAA+AGG + Chr1:100092142-100092161 None:intergenic 50.0%
GGGCTCCATTTCTCTGCTTT+CGG + Chr1:100093242-100093261 None:intergenic 50.0%
GGTTTGAACCTTGGACCTCA+TGG - Chr1:100090110-100090129 MsG0180006095.01.T01:three_prime_UTR 50.0%
GTTCAGTAATGTCTCGTGCG+AGG + Chr1:100091551-100091570 None:intergenic 50.0%
GTTGAACACCTAGTCAGTGC+AGG + Chr1:100092466-100092485 None:intergenic 50.0%
TAGTCAGTGCAGGCATAGTC+GGG + Chr1:100092456-100092475 None:intergenic 50.0%
TCAGCCCAATGACATGTCTC+AGG + Chr1:100090723-100090742 None:intergenic 50.0%
TCCATGCCTGTAGGAAAGGA+TGG + Chr1:100092138-100092157 None:intergenic 50.0%
TCGTGCGAGGACAGAAAGAA+TGG + Chr1:100091538-100091557 None:intergenic 50.0%
TCTCAGAATTGCTGCTGCAC+AGG - Chr1:100089677-100089696 MsG0180006095.01.T01:three_prime_UTR 50.0%
TGAGGTCCAAGGTTCAAACC+TGG + Chr1:100090110-100090129 None:intergenic 50.0%
TGCATCCTGTAATCTGCTGG+AGG - Chr1:100090966-100090985 MsG0180006095.01.T01:intron 50.0%
TGCCTCCGAAAGCAGAGAAA+TGG - Chr1:100093234-100093253 MsG0180006095.01.T01:intron 50.0%
TTCTCTGCTTTCGGAGGCAA+TGG + Chr1:100093233-100093252 None:intergenic 50.0%
TTGATGCGAACACACAGGTG+GGG + Chr1:100092594-100092613 None:intergenic 50.0%
! AAGCCCTCTTTGTTTGGCTG+TGG + Chr1:100092163-100092182 None:intergenic 50.0%
! AGAAGTGTGTCGGGTTCTCT+AGG + Chr1:100093263-100093282 None:intergenic 50.0%
! GGACAAGTTGGAGAAAGAGC+TGG - Chr1:100091739-100091758 MsG0180006095.01.T01:three_prime_UTR 50.0%
!! GAATGTCAACGGCTTTGGAC+CGG + Chr1:100089449-100089468 None:intergenic 50.0%
!! TACACTTTTCAAGCGGTGGG+TGG + Chr1:100090253-100090272 None:intergenic 50.0%
!! TGGTTCCTGTTGGTGGTTGT+TGG - Chr1:100092968-100092987 MsG0180006095.01.T01:intron 50.0%
!! TGTTGGGTTGGGCAGAGAAA+AGG - Chr1:100091060-100091079 MsG0180006095.01.T01:three_prime_UTR 50.0%
!! TTCCTGTTGGTGGTTGTTGG+CGG - Chr1:100092971-100092990 MsG0180006095.01.T01:intron 50.0%
AAACTCCGGCGCATACTCTC+TGG - Chr1:100090595-100090614 MsG0180006095.01.T01:intron 55.0%
AAGGGTAGCAACCGCAACAC+CGG + Chr1:100091633-100091652 None:intergenic 55.0%
AGAGCTGGTGCAGATAGCAG+TGG - Chr1:100091754-100091773 MsG0180006095.01.T01:three_prime_UTR 55.0%
AGATGGCATCCTCTAGCTGC+CGG - Chr1:100091611-100091630 MsG0180006095.01.T01:intron 55.0%
CGCAGTCGGAGAGGGAAATA+GGG - Chr1:100089473-100089492 MsG0180006095.01.T01:three_prime_UTR 55.0%
CGGAGAGGGAAATAGGGATC+CGG - Chr1:100089479-100089498 MsG0180006095.01.T01:three_prime_UTR 55.0%
CTCATCGGAGCTCCGTGAAA+CGG - Chr1:100089390-100089409 MsG0180006095.01.T01:three_prime_UTR 55.0%
GCTGTGGATTCCATGCCTGT+AGG + Chr1:100092147-100092166 None:intergenic 55.0%
GCTTGGAAGACGCATGGAGT+TGG - Chr1:100090414-100090433 MsG0180006095.01.T01:three_prime_UTR 55.0%
GTGAGTCGATGCAAACCCTC+CGG - Chr1:100090653-100090672 MsG0180006095.01.T01:three_prime_UTR 55.0%
GTTTCACGGAGCTCCGATGA+GGG + Chr1:100089391-100089410 None:intergenic 55.0%
TATGCGCCGGAGTTTCTGTG+CGG + Chr1:100090590-100090609 None:intergenic 55.0%
TCGCAGTCGGAGAGGGAAAT+AGG - Chr1:100089472-100089491 MsG0180006095.01.T01:three_prime_UTR 55.0%
TCTGCTGACAGCGAAGATGG+TGG - Chr1:100091782-100091801 MsG0180006095.01.T01:three_prime_UTR 55.0%
TGCAGTGACGACTGGCGAAT+TGG - Chr1:100089599-100089618 MsG0180006095.01.T01:three_prime_UTR 55.0%
TGGAAGACGCATGGAGTTGG+TGG - Chr1:100090417-100090436 MsG0180006095.01.T01:three_prime_UTR 55.0%
TTGGACGGAGGATCTCCGAA+CGG + Chr1:100089364-100089383 None:intergenic 55.0%
! CAAGTTTTCCGCAGCTGCTG+CGG - Chr1:100092725-100092744 MsG0180006095.01.T01:intron 55.0%
! GACTTCGATGGCGGCTAGTA+AGG - Chr1:100089530-100089549 MsG0180006095.01.T01:three_prime_UTR 55.0%
!! CGACTATGCCTGCACTGACT+AGG - Chr1:100092455-100092474 MsG0180006095.01.T01:CDS 55.0%
!! TCCTGTTGGTGGTTGTTGGC+GGG - Chr1:100092972-100092991 MsG0180006095.01.T01:intron 55.0%
ACCCCTCCGCACAGAAACTC+CGG - Chr1:100090581-100090600 MsG0180006095.01.T01:intron 60.0%
CGTTGAGCTACTCAACCCCC+CGG + Chr1:100089891-100089910 None:intergenic 60.0%
CGTTTCACGGAGCTCCGATG+AGG + Chr1:100089392-100089411 None:intergenic 60.0%
GCTGATGGCTGCGGACAAGT+TGG - Chr1:100091727-100091746 MsG0180006095.01.T01:three_prime_UTR 60.0%
GGAGGATCTCCGAACGGTGA+AGG + Chr1:100089358-100089377 None:intergenic 60.0%
GGGAAATAGGGATCCGGCAC+CGG - Chr1:100089485-100089504 MsG0180006095.01.T01:three_prime_UTR 60.0%
TCCCGCCAACAACCACCAAC+AGG + Chr1:100092976-100092995 None:intergenic 60.0%
! AAATAGGGATCCGGCACCGG+CGG - Chr1:100089488-100089507 MsG0180006095.01.T01:three_prime_UTR 60.0%
! TCCTCTAGCTGCCGGTGTTG+CGG - Chr1:100091619-100091638 MsG0180006095.01.T01:intron 60.0%
!! TGTTGGTGGTTGTTGGCGGG+AGG - Chr1:100092975-100092994 MsG0180006095.01.T01:intron 60.0%
ACCGCAACACCGGCAGCTAG+AGG + Chr1:100091623-100091642 None:intergenic 65.0%
ACCTTCCACCGCAGCAGCTG+CGG + Chr1:100092736-100092755 None:intergenic 65.0%
CACCGGCGGCTTCTTTGCAC+CGG - Chr1:100089502-100089521 MsG0180006095.01.T01:three_prime_UTR 65.0%
CGCCGGAGTTTCTGTGCGGA+GGG + Chr1:100090586-100090605 None:intergenic 65.0%
GACCGGTGCAAAGAAGCCGC+CGG + Chr1:100089507-100089526 None:intergenic 65.0%
GCCGGAGTTTCTGTGCGGAG+GGG + Chr1:100090585-100090604 None:intergenic 65.0%
TGCAAAGAAGCCGCCGGTGC+CGG + Chr1:100089501-100089520 None:intergenic 65.0%
TTAGCGGCTTGCCGGAGCTC+CGG - Chr1:100089427-100089446 MsG0180006095.01.T01:three_prime_UTR 65.0%
! CGGCTTCTTTGCACCGGTCG+CGG - Chr1:100089508-100089527 MsG0180006095.01.T01:three_prime_UTR 65.0%
! GGGCTCCAGAGAGTATGCGC+CGG + Chr1:100090603-100090622 None:intergenic 65.0%
! GTTTTCCGCAGCTGCTGCGG+TGG - Chr1:100092728-100092747 MsG0180006095.01.T01:intron 65.0%
!! ACGGCTTTGGACCGGAGCTC+CGG + Chr1:100089441-100089460 None:intergenic 65.0%
CCGCCATCGAAGTCCGCGAC+CGG + Chr1:100089524-100089543 None:intergenic 70.0%
CCGGTCGCGGACTTCGATGG+CGG - Chr1:100089521-100089540 MsG0180006095.01.T01:three_prime_UTR 70.0%
GCGCCGGAGTTTCTGTGCGG+AGG + Chr1:100090587-100090606 None:intergenic 70.0%
TCCGCAGCTGCTGCGGTGGA+AGG - Chr1:100092732-100092751 MsG0180006095.01.T01:intron 70.0%
! GCACCGGTCGCGGACTTCGA+TGG - Chr1:100089518-100089537 MsG0180006095.01.T01:three_prime_UTR 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 100089352 100093584 100089352 ID=MsG0180006095.01;Name=MsG0180006095.01
Chr1 mRNA 100089352 100093584 100089352 ID=MsG0180006095.01.T01;Parent=MsG0180006095.01;Name=MsG0180006095.01.T01;_AED=0.08;_eAED=0.08;_QI=185|1|1|1|0.25|0.2|5|2031|262
Chr1 exon 100089352 100090502 100089352 ID=MsG0180006095.01.T01:exon:12690;Parent=MsG0180006095.01.T01
Chr1 exon 100090596 100090785 100090596 ID=MsG0180006095.01.T01:exon:12689;Parent=MsG0180006095.01.T01
Chr1 exon 100091005 100091459 100091005 ID=MsG0180006095.01.T01:exon:12688;Parent=MsG0180006095.01.T01
Chr1 exon 100091660 100092521 100091660 ID=MsG0180006095.01.T01:exon:12687;Parent=MsG0180006095.01.T01
Chr1 exon 100093238 100093584 100093238 ID=MsG0180006095.01.T01:exon:12686;Parent=MsG0180006095.01.T01
Chr1 five_prime_UTR 100093400 100093584 100093400 ID=MsG0180006095.01.T01:five_prime_utr;Parent=MsG0180006095.01.T01
Chr1 CDS 100093238 100093399 100093238 ID=MsG0180006095.01.T01:cds;Parent=MsG0180006095.01.T01
Chr1 CDS 100091895 100092521 100091895 ID=MsG0180006095.01.T01:cds;Parent=MsG0180006095.01.T01
Chr1 three_prime_UTR 100091660 100091894 100091660 ID=MsG0180006095.01.T01:three_prime_utr;Parent=MsG0180006095.01.T01
Chr1 three_prime_UTR 100091005 100091459 100091005 ID=MsG0180006095.01.T01:three_prime_utr;Parent=MsG0180006095.01.T01
Chr1 three_prime_UTR 100090596 100090785 100090596 ID=MsG0180006095.01.T01:three_prime_utr;Parent=MsG0180006095.01.T01
Chr1 three_prime_UTR 100089352 100090502 100089352 ID=MsG0180006095.01.T01:three_prime_utr;Parent=MsG0180006095.01.T01
Chr1 mRNA 100089872 100091877 100089872 ID=MsG0180006095.01.T02;Parent=MsG0180006095.01;Name=MsG0180006095.01.T02;_AED=0.37;_eAED=0.37;_QI=0|0|0|1|1|1|3|0|315
Chr1 exon 100091823 100091877 100091823 ID=MsG0180006095.01.T02:exon:12693;Parent=MsG0180006095.01.T02
Chr1 exon 100091005 100091309 100091005 ID=MsG0180006095.01.T02:exon:12692;Parent=MsG0180006095.01.T02
Chr1 exon 100089872 100090459 100089872 ID=MsG0180006095.01.T02:exon:12691;Parent=MsG0180006095.01.T02
Chr1 CDS 100091823 100091877 100091823 ID=MsG0180006095.01.T02:cds;Parent=MsG0180006095.01.T02
Chr1 CDS 100091005 100091309 100091005 ID=MsG0180006095.01.T02:cds;Parent=MsG0180006095.01.T02
Chr1 CDS 100089872 100090459 100089872 ID=MsG0180006095.01.T02:cds;Parent=MsG0180006095.01.T02
Gene Sequence

>MsG0180006095.01.T01

ATGGCGGCTAGTAAGGTGAAGAAAGCTCTTGGACTCAAAACGTCGTCGTTGAAGAATAAGCGTGCAGTGACGACTGGCGAATTGGTGAGAACGCAGATGAGAATCTCTGAGCAGAGTGATACTAGAATTCGAAGAGCACTTCTCAGAATTGCTGCTGCACAGCTTGGAAGACGCATGGAGTTGGTGGTTCTTCCGTTAGAGCTTATACCACTGTTCAAGACTTCAGATTTTTCCAGTCAACAAGAGTATGAGGCTTGGTTGAGAAGAAATTTGAAGGTTCTTGAAGCAGGGCTCCTCTTACATCCGCACATTCCATTAAATAAGGCAGACCCCTCCGCACAGAAACTCCGGCGCATACTCTCTGGAGCCCTTGAGAAACCTATAGATATTGCAAATAGCAGTGAGTCGATGCAAACCCTCCGGAGTATTGTTATCTCTCTTCTTGCAGATCATTTGACGGGTCAGTTCCTGAGACATGTCATTGGGCTGAACGGGTTTCCAATGAACCTTTGGATCTACCAAACTCTTTTAGAAGCTTGTTTTGATACTCATGTTGAAACATGTGTGATTGAAGAGGTTGATGAGGTCTTAGAGCTCATTAAGAAGACCTGGCTTATGCTAGGAATCAATGAAACACTGCATAATATTTGTTTTACATGGGTCTTATTTCGTAGGTATGTCGTCACTCGTGAAATTGAAAATGATCTGCTTTTTGCATCCTGTAATCTGCTGGAGGAAGTTGAGAAAGATACTGAGGCCATGAAGATCCTATTTACTCGAAAGCTTTGA

>MsG0180006095.01.T02

ATGTTGGGTTGGGCAGAGAAAAGGCTCCTTGCTTACCATGATACTTTCCATGACGCTGCCGGTGTTGCGGTTGCTACCCTTCACGTGTGTTATGGAAATGAGTTGAAGAAATATGTTAAAGGCATCAATGATTTGACACCTGATGCTATAGAAGTGCTGATGGCTGCGGACAAGTTGGAGAAAGAGCTGGTGCAGATAGCAGTGGAAGATTCTGCTGACAGCGAAGATGGTGGAAAATCTATTATAATGGAGATCCATCCTTACGAAGCTGAAGCTATAATTGCTAATCTTGTTAAGTCATGGATAAACATCAGAGTGGATAGACTGGCGGAATTGGTTGAAAGAGTTCTGCAACAAGAGGTGTTCAACAAAAGGAAATATCACGGTGTATTCCGGAAAAAGGAAAAGCCACAAATGACTCAGAGGAGGAAAGCCCTTGTTAGTACCACAAACGGAGATAGCTCATTCGATGTACCCCACCTGTGTGTTCGCATCAATACTATGCAGCGTATTCGCATGGAATTAGGGGTTTTGGAAAAGAGGATAGTTGCCAATCTTAGCAATTCTAATTCCACTGGTGAGAATGATATAGCAAATGGGGTGAGCTTCAAGTTTTCCGCAGCTGCTGCGGTGGAAGGTATCCGACAACTATGTGAGTGTATAGCATACAAAGCAGTTTTCCAAGATCTATGTCACACTCTTTGGGACAGCCTATATGTTGGAGAAGTTTCATCCGCAAGGATTGAGCCTTTCCTTCATGAACTTGAGCATTATTTAGAGATCATATCATCAACAGTGCATGATAAAGTTAGAACACGGGTAATTATTGAAGTAATGCGGGCTTCTTTTGATGGTTCCTGTTGGTGGTTGTTGGCGGGAGGTTCATCTCGTGCTTTTTCTTTTGCAAGATTCTTTTGTATTAGAGGAAGATTTCAAGCTTCTGAGTGA
Protein sequence

>MsG0180006095.01.T01

MAASKVKKALGLKTSSLKNKRAVTTGELVRTQMRISEQSDTRIRRALLRIAAAQLGRRMELVVLPLELIPLFKTSDFSSQQEYEAWLRRNLKVLEAGLLLHPHIPLNKADPSAQKLRRILSGALEKPIDIANSSESMQTLRSIVISLLADHLTGQFLRHVIGLNGFPMNLWIYQTLLEACFDTHVETCVIEEVDEVLELIKKTWLMLGINETLHNICFTWVLFRRYVVTREIENDLLFASCNLLEEVEKDTEAMKILFTRKL*

>MsG0180006095.01.T02

MLGWAEKRLLAYHDTFHDAAGVAVATLHVCYGNELKKYVKGINDLTPDAIEVLMAADKLEKELVQIAVEDSADSEDGGKSIIMEIHPYEAEAIIANLVKSWINIRVDRLAELVERVLQQEVFNKRKYHGVFRKKEKPQMTQRRKALVSTTNGDSSFDVPHLCVRINTMQRIRMELGVLEKRIVANLSNSNSTGENDIANGVSFKFSAAAAVEGIRQLCECIAYKAVFQDLCHTLWDSLYVGEVSSARIEPFLHELEHYLEIISSTVHDKVRTRVIIEVMRASFDGSCWWLLAGGSSRAFSFARFFCIRGRFQASE*