AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280006296.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280006296.01.T01 MTR_2g005350 97.500 440 6 4 1 437 1 438 0.0 869
MsG0280006296.01.T01 MTR_1g016880 57.233 318 133 3 122 437 60 376 1.67e-131 384
MsG0280006296.01.T01 MTR_1g110290 52.812 320 148 2 119 437 76 393 1.21e-121 360
MsG0280006296.01.T01 MTR_5g055480 52.258 310 146 1 128 437 83 390 1.09e-120 357
MsG0280006296.01.T01 MTR_5g006930 45.897 390 196 3 49 437 11 386 3.27e-120 355
MsG0280006296.01.T01 MTR_8g015500 54.098 305 138 2 133 436 109 412 2.44e-118 352
MsG0280006296.01.T01 MTR_5g006920 43.645 417 198 5 34 437 29 421 1.30e-116 348
MsG0280006296.01.T01 MTR_6g083830 52.427 309 145 2 130 437 112 419 1.39e-116 347
MsG0280006296.01.T01 MTR_3g104840 47.756 312 143 4 127 437 101 393 1.20e-100 306
MsG0280006296.01.T01 MTR_3g108740 42.320 319 159 6 134 430 58 373 4.34e-75 239
MsG0280006296.01.T01 MTR_1g009960 43.000 300 149 3 158 437 102 399 1.95e-72 233
MsG0280006296.01.T01 MTR_4g127550 41.667 288 147 3 164 432 104 389 4.68e-70 227
MsG0280006296.01.T01 MTR_2g037600 43.007 286 141 4 167 432 105 388 2.53e-68 223
MsG0280006296.01.T01 MTR_1g009960 46.721 244 122 2 158 395 102 343 7.42e-68 221
MsG0280006296.01.T01 MTR_2g037620 41.754 285 145 3 167 432 97 379 2.16e-67 220
MsG0280006296.01.T01 MTR_2g024120 37.931 319 151 10 152 428 46 359 3.44e-51 177
MsG0280006296.01.T01 MTR_8g094180 36.624 314 144 11 167 431 55 362 2.52e-48 169
MsG0280006296.01.T01 MTR_3g106930 37.179 312 180 8 136 435 67 374 8.13e-47 166
MsG0280006296.01.T01 MTR_8g094180 37.879 264 127 8 167 397 55 314 5.24e-45 159
MsG0280006296.01.T01 MTR_1g048320 38.062 289 148 10 167 435 64 341 6.17e-41 149
MsG0280006296.01.T01 MTR_2g087610 34.768 302 149 10 168 435 78 365 1.13e-39 146
MsG0280006296.01.T01 MTR_1g031060 34.364 291 158 8 167 435 80 359 1.98e-33 129
MsG0280006296.01.T01 MTR_1g031080 35.223 247 130 7 210 435 52 289 1.87e-31 122
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280006296.01.T01 AT1G10280 57.143 434 161 6 5 437 3 412 0.0 511
MsG0280006296.01.T01 AT5G11730 55.960 302 132 1 136 437 86 386 8.17e-126 370
MsG0280006296.01.T01 AT1G51770 54.952 313 139 2 126 437 81 392 9.95e-125 368
MsG0280006296.01.T01 AT5G25970 54.430 316 142 2 122 436 72 386 1.02e-124 367
MsG0280006296.01.T01 AT5G25970 54.430 316 142 2 122 436 72 386 1.02e-124 367
MsG0280006296.01.T01 AT5G25970 54.430 316 142 2 122 436 72 386 1.02e-124 367
MsG0280006296.01.T01 AT3G21310 54.777 314 140 2 125 437 71 383 5.38e-123 362
MsG0280006296.01.T01 AT3G21310 54.777 314 140 2 125 437 71 383 5.38e-123 362
MsG0280006296.01.T01 AT1G68390 55.556 315 134 4 127 437 96 408 2.80e-120 357
MsG0280006296.01.T01 AT1G68380 52.294 327 146 6 116 437 71 392 7.05e-110 329
MsG0280006296.01.T01 AT1G73810 51.792 307 143 2 133 437 115 418 1.11e-109 330
MsG0280006296.01.T01 AT1G51770 50.160 313 127 3 126 437 81 365 4.04e-108 324
MsG0280006296.01.T01 AT1G10880 51.736 288 137 2 144 431 95 380 6.53e-107 322
MsG0280006296.01.T01 AT5G16170 48.580 317 144 3 139 437 94 409 9.43e-104 314
MsG0280006296.01.T01 AT4G31350 43.110 283 140 3 167 430 88 368 6.28e-74 236
MsG0280006296.01.T01 AT4G31350 43.110 283 140 3 167 430 88 368 6.28e-74 236
MsG0280006296.01.T01 AT4G31350 43.110 283 140 3 167 430 88 368 6.28e-74 236
MsG0280006296.01.T01 AT4G25870 40.979 327 165 8 127 430 59 380 2.66e-71 230
MsG0280006296.01.T01 AT4G30060 44.755 286 134 4 168 432 109 391 5.04e-71 230
MsG0280006296.01.T01 AT4G30060 44.755 286 134 4 168 432 109 391 5.04e-71 230
MsG0280006296.01.T01 AT4G31350 42.403 283 137 4 167 430 88 363 7.96e-69 223
MsG0280006296.01.T01 AT2G19160 42.403 283 141 3 168 430 106 386 5.75e-68 221
MsG0280006296.01.T01 AT2G19160 42.403 283 141 3 168 430 106 386 5.75e-68 221
MsG0280006296.01.T01 AT5G57270 42.958 284 139 4 168 430 98 379 1.66e-67 220
MsG0280006296.01.T01 AT5G57270 42.958 284 139 4 168 430 98 379 1.66e-67 220
MsG0280006296.01.T01 AT5G57270 42.958 284 139 4 168 430 98 379 1.66e-67 220
MsG0280006296.01.T01 AT5G57270 42.958 284 139 4 168 430 98 379 1.66e-67 220
MsG0280006296.01.T01 AT5G57270 42.958 284 139 4 168 430 98 379 1.66e-67 220
MsG0280006296.01.T01 AT3G21310 56.111 180 78 1 125 303 71 250 2.31e-64 208
MsG0280006296.01.T01 AT1G62305 39.604 303 136 10 167 428 68 364 1.26e-54 186
MsG0280006296.01.T01 AT3G52060 38.571 280 151 8 167 435 74 343 9.82e-53 180
MsG0280006296.01.T01 AT1G11940 39.597 298 134 10 167 423 73 365 6.02e-52 179
MsG0280006296.01.T01 AT5G25330 40.860 279 154 7 168 435 81 359 1.17e-50 176
MsG0280006296.01.T01 AT5G14550 39.357 249 129 5 167 396 64 309 2.12e-49 171
MsG0280006296.01.T01 AT5G14550 36.275 306 150 9 167 430 64 366 6.75e-49 171
MsG0280006296.01.T01 AT5G14550 36.393 305 149 9 167 429 64 365 7.79e-49 171
MsG0280006296.01.T01 AT1G62305 43.396 212 94 5 167 356 68 275 7.52e-47 164
MsG0280006296.01.T01 AT1G11940 47.753 178 86 4 167 340 73 247 2.17e-43 154
MsG0280006296.01.T01 AT4G32290 38.514 296 158 9 160 435 85 376 1.38e-39 146
MsG0280006296.01.T01 AT1G62305 35.314 303 125 10 167 428 68 340 2.73e-39 145
MsG0280006296.01.T01 AT5G22070 34.437 302 151 11 168 435 71 359 3.74e-39 145
MsG0280006296.01.T01 AT5G14550 34.812 293 145 10 167 430 64 339 6.85e-39 144

Find 165 sgRNAs with CRISPR-Local

Find 207 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACAGGTATTGTTAGAGAATT+TGG 0.124521 2:-132827 MsG0280006296.01.T01:three_prime_UTR
ATTACTATGATATGATTATT+AGG 0.156824 2:+134616 None:intergenic
TGACTGTTCTGTTTGAATTA+AGG 0.235975 2:+133194 None:intergenic
TGTATTGATAGATTCCTTAA+TGG 0.257767 2:+132749 None:intergenic
GGTGGTGGAGGAGGAGGAGG+AGG 0.258518 2:+134151 None:intergenic
CTTATTCACAGGCTGTTTCT+TGG 0.263757 2:-133612 MsG0280006296.01.T01:intron
TGGGATATTGCGTCGATAAA+AGG 0.273998 2:+133850 None:intergenic
TTATTCACAGGCTGTTTCTT+GGG 0.283167 2:-133611 MsG0280006296.01.T01:intron
TAGTCTTAGTCCCTAGATTT+TGG 0.283248 2:-132909 MsG0280006296.01.T01:three_prime_UTR
TAGGGATAGTTGTATTTCTT+AGG 0.286910 2:+134028 None:intergenic
AGAATCGAAGATATTGAAAA+TGG 0.298524 2:+134718 None:intergenic
GGGATGTTTGTCTCTCTATC+TGG 0.304860 2:+134853 None:intergenic
GGGAACCATGGAACATATTC+AGG 0.311181 2:+133215 None:intergenic
GAAATCCTCTACCAAAATCT+AGG 0.330916 2:+132898 None:intergenic
TATTGTATTCCCTTTCCCTT+TGG 0.332066 2:-134897 None:intergenic
TTACTATGATATGATTATTA+GGG 0.333965 2:+134617 None:intergenic
GAAGTCATATCTGAATTATA+TGG 0.351240 2:+133067 None:intergenic
ACGGAAGAGGGAAAAGTATT+GGG 0.351893 2:+133288 None:intergenic
TCTCTCTATCTGGTCTGTTC+AGG 0.353698 2:+134863 None:intergenic
AAGCAGGCTTACAGTATTTA+CGG 0.358219 2:+133269 None:intergenic
GACTGTTCTGTTTGAATTAA+GGG 0.359001 2:+133195 None:intergenic
CTTTACCCTTGTTGCCACTC+TGG 0.363568 2:-133961 MsG0280006296.01.T01:CDS
GTGATTTGATTGGATTGGAT+TGG 0.374057 2:-134516 MsG0280006296.01.T01:five_prime_UTR
GTTGGAAGGTAGTGTTCATC+TGG 0.377430 2:+133241 None:intergenic
TTGTGTTGTGGTGATTTGAT+TGG 0.387077 2:-134526 MsG0280006296.01.T01:five_prime_UTR
TCTTCGATTCTTGGTAGTTA+TGG 0.387474 2:-134706 MsG0280006296.01.T01:five_prime_UTR
CAGGTATTGTTAGAGAATTT+GGG 0.391685 2:-132826 MsG0280006296.01.T01:three_prime_UTR
TTGTCCCTCCCGTAGGTTGC+CGG 0.393192 2:+133139 None:intergenic
TGTTGTTGTTGGGTTGTTGT+TGG 0.395852 2:+134227 None:intergenic
TATGATGATCCTTCCCGTTA+TGG 0.399415 2:-133424 MsG0280006296.01.T01:CDS
TTTGCTGCTGGTGTCGTCAT+TGG 0.399698 2:-134379 MsG0280006296.01.T01:CDS
TACGGAAGAGGGAAAAGTAT+TGG 0.403770 2:+133287 None:intergenic
CTCCCGTAGGTTGCCGGATG+AGG 0.404141 2:+133145 None:intergenic
GCACTCTGGTTTGGTTAGAT+TGG 0.409919 2:-134431 MsG0280006296.01.T01:CDS
CAGAAGAAGAAGAAGGTTGT+TGG 0.421210 2:+134284 None:intergenic
ATGCGTGGAGGAGGAGAAGA+AGG 0.422782 2:-134484 MsG0280006296.01.T01:CDS
AATAATAAGAATTGGATCCT+TGG 0.423828 2:-134584 MsG0280006296.01.T01:five_prime_UTR
TGCTGTTGCTGTTGCTTCGT+CGG 0.423883 2:+134451 None:intergenic
TTGTGGTGATTTGATTGGAT+TGG 0.426907 2:-134521 MsG0280006296.01.T01:five_prime_UTR
AGGTACATGAAAGCGAGTTT+AGG 0.428382 2:+133995 None:intergenic
CAGTGCTTAAGCTGAATATC+AGG 0.430715 2:+133373 None:intergenic
TATTGCGGCTGTAGCGGCCT+CGG 0.431543 2:+133401 None:intergenic
GTAGCGGCCTCGGCCATAAC+GGG 0.437948 2:+133411 None:intergenic
GGTCCTCATCCGGCAACCTA+CGG 0.443893 2:-133148 MsG0280006296.01.T01:CDS
AGAGAAGGTGTGGGTGATGT+TGG 0.444842 2:+134084 None:intergenic
TTTACCCTTGTTGCCACTCT+GGG 0.445219 2:-133960 MsG0280006296.01.T01:CDS
ACAGCAACAGCACTCTGGTT+TGG 0.447376 2:-134440 MsG0280006296.01.T01:CDS
GGATATAAATGTTGAAGAGA+TGG 0.459423 2:+133915 None:intergenic
AAGCAAGGGCTCCAATGCAC+TGG 0.459653 2:+133012 None:intergenic
GGGATATTGCGTCGATAAAA+GGG 0.460802 2:+133851 None:intergenic
TGTAGCGGCCTCGGCCATAA+CGG 0.463805 2:+133410 None:intergenic
CATATCCTCCTCTTCGGAGG+GGG 0.463862 2:+134129 None:intergenic
AGAAGAAGAAGAAGGTTGTT+GGG 0.466492 2:+134285 None:intergenic
TGTTGTTGGGTTGTTGTTGG+AGG 0.466863 2:+134230 None:intergenic
CGATTCTTGGTAGTTATGGT+AGG 0.469111 2:-134702 MsG0280006296.01.T01:five_prime_UTR
CTCTGGGAGAGATTCTTTCA+AGG 0.470451 2:-133944 MsG0280006296.01.T01:CDS
ATCTGAATTATATGGACAAA+GGG 0.472207 2:+133075 None:intergenic
CAAGTTTGATCCCAGTGCAT+TGG 0.474721 2:-133023 MsG0280006296.01.T01:CDS
GTTGTTGGGTTGTTGTTGGA+GGG 0.477667 2:+134231 None:intergenic
GTCAATGCTCGGTCCTCATC+CGG 0.486872 2:-133158 MsG0280006296.01.T01:CDS
ATGGCGAGGATGCGTGGAGG+AGG 0.491011 2:-134493 MsG0280006296.01.T01:CDS
GTCCTCATCCGGCAACCTAC+GGG 0.492307 2:-133147 MsG0280006296.01.T01:CDS
ATGAGATATCTGTAAACAGT+AGG 0.496818 2:+133475 None:intergenic
TCTATTGATGTATGTACAAG+AGG 0.500861 2:-132954 MsG0280006296.01.T01:three_prime_UTR
ATTTATATCCACGCTCCTCC+TGG 0.504909 2:-133902 MsG0280006296.01.T01:CDS
TATTCACAGGCTGTTTCTTG+GGG 0.505590 2:-133610 MsG0280006296.01.T01:intron
TCGACGCAATATCCCAAGTC+AGG 0.507097 2:-133843 MsG0280006296.01.T01:intron
AGGAAGCCCTCCAGAAAAGT+TGG 0.507783 2:+134056 None:intergenic
ACAGTAGGGAAGTTGTAGAC+TGG 0.509799 2:+133490 None:intergenic
AAAGACAAATCCAAAGGGAA+AGG 0.510476 2:+134887 None:intergenic
CAGTAGGGAAGTTGTAGACT+GGG 0.512385 2:+133491 None:intergenic
AACATATCCTCCTCTTCGGA+GGG 0.513482 2:+134127 None:intergenic
CTCCAACATATCCTCCTCTT+CGG 0.513489 2:+134123 None:intergenic
TGTTCATCTGGGTAGCAAGC+AGG 0.515330 2:+133253 None:intergenic
CAGAGTGGCAACAAGGGTAA+AGG 0.517032 2:+133962 None:intergenic
GATCCTTCCCGTTATGGCCG+AGG 0.520104 2:-133418 MsG0280006296.01.T01:CDS
CTCCGAAGAGGAGGATATGT+TGG 0.522889 2:-134125 MsG0280006296.01.T01:CDS
CTTACAGTATTTACGGAAGA+GGG 0.523130 2:+133276 None:intergenic
TCGCTTTCATGTACCTCACC+AGG 0.525613 2:-133988 MsG0280006296.01.T01:CDS
TGAAAAGTCGAGCAGTGCAT+TGG 0.525633 2:+133549 None:intergenic
TCATCAATCAATTGAATCCA+AGG 0.527742 2:+134567 None:intergenic
GATATAAATGTTGAAGAGAT+GGG 0.527961 2:+133916 None:intergenic
GCGAGCAAAGAGGTAACAAA+TGG 0.530365 2:+133045 None:intergenic
CTGATATTCAGCTTAAGCAC+TGG 0.530590 2:-133372 MsG0280006296.01.T01:CDS
CAGCTTAAGCACTGGCGCAA+AGG 0.531196 2:-133364 MsG0280006296.01.T01:CDS
GCTTACAGTATTTACGGAAG+AGG 0.538011 2:+133275 None:intergenic
TGGAACATATTCAGGAAGGT+TGG 0.538336 2:+133223 None:intergenic
ATTGGTAGATCTGTCTGTAC+AGG 0.541245 2:-132845 MsG0280006296.01.T01:three_prime_UTR
TCGAAGATATTGAAAATGGA+AGG 0.548453 2:+134722 None:intergenic
TTGATAGATTCCTTAATGGA+AGG 0.549139 2:+132753 None:intergenic
GAACAGTCACATGGGTCGAC+TGG 0.550051 2:-133180 MsG0280006296.01.T01:CDS
GATGTTGGAAGGATGAAGAA+AGG 0.550089 2:+134099 None:intergenic
AAATTAAAAGTTCATGACTT+CGG 0.551140 2:+132979 None:intergenic
CAACAAGGGTAAAGGTCCCC+TGG 0.554561 2:+133970 None:intergenic
AAGACAAATCCAAAGGGAAA+GGG 0.554663 2:+134888 None:intergenic
GAAGCATATTGCGGCTGTAG+CGG 0.557435 2:+133395 None:intergenic
GATTGGATGGCGAGGATGCG+TGG 0.560283 2:-134499 MsG0280006296.01.T01:exon
TTCTTGGGGAACAGTTACTC+TGG 0.561336 2:-133596 MsG0280006296.01.T01:CDS
ACCTTCCTGAATATGTTCCA+TGG 0.561364 2:-133220 MsG0280006296.01.T01:CDS
AGTAAGAAATCATTTCGCAT+TGG 0.561703 2:-132863 MsG0280006296.01.T01:three_prime_UTR
ACTGGCGCAAAGGCTCTCAA+TGG 0.562161 2:-133354 MsG0280006296.01.T01:CDS
TTTGATTGGATTGGATTGGA+TGG 0.563746 2:-134512 MsG0280006296.01.T01:exon
AGCAAGGGCTCCAATGCACT+GGG 0.565315 2:+133013 None:intergenic
AAGACATCAGAAGAAGAAGA+AGG 0.565316 2:+134277 None:intergenic
AAATCCTCTACCAAAATCTA+GGG 0.568984 2:+132899 None:intergenic
GGATTCAATTGATTGATGAT+CGG 0.569087 2:-134563 MsG0280006296.01.T01:five_prime_UTR
AGTTATATTGTCCCTCCCGT+AGG 0.573521 2:+133132 None:intergenic
CAACATATCCTCCTCTTCGG+AGG 0.575606 2:+134126 None:intergenic
TTCGGAAGAGAGGTCAAGCA+AGG 0.577351 2:+132997 None:intergenic
TATCTGAATTATATGGACAA+AGG 0.578382 2:+133074 None:intergenic
TTATGGTAGGAGTACCGCAC+CGG 0.578388 2:-134689 MsG0280006296.01.T01:five_prime_UTR
TGGGTCGACTGGTCAATGCT+CGG 0.578827 2:-133169 MsG0280006296.01.T01:CDS
ATATCCTCCTCTTCGGAGGG+GGG 0.578887 2:+134130 None:intergenic
GAAAAGTTGGTGGTCAGAGA+AGG 0.580866 2:+134069 None:intergenic
CTCTGGCCGATGCGGAGAGG+CGG 0.581736 2:-133579 MsG0280006296.01.T01:CDS
CTCTCCCAGAGTGGCAACAA+GGG 0.584168 2:+133956 None:intergenic
CAGGCAAAGACAAATCCAAA+GGG 0.584668 2:+134882 None:intergenic
AGTTTAGGTACACGAGCGTA+GGG 0.587019 2:+134010 None:intergenic
TAGTAGCCGCCTCTCCGCAT+CGG 0.587573 2:+133573 None:intergenic
TGTTTGAATTAAGGGAACCA+TGG 0.588224 2:+133203 None:intergenic
TGAGATATCTGTAAACAGTA+GGG 0.589706 2:+133476 None:intergenic
ACATATTCAGGAAGGTTGGA+AGG 0.590150 2:+133227 None:intergenic
TCTCTCCCAGAGTGGCAACA+AGG 0.591099 2:+133955 None:intergenic
GTTGTATTTCTTAGGAACCA+AGG 0.591699 2:+134036 None:intergenic
ATCGCGGCGGCATTGTGTTG+TGG 0.591975 2:-134538 MsG0280006296.01.T01:five_prime_UTR
TGATTGATGATCGGTGATCG+CGG 0.593667 2:-134554 MsG0280006296.01.T01:five_prime_UTR
GTTGGTGGTCAGAGAAGGTG+TGG 0.594958 2:+134074 None:intergenic
ATACAGGCTATAAGGAACAA+TGG 0.597495 2:-133100 MsG0280006296.01.T01:CDS
CTCATCCGGCAACCTACGGG+AGG 0.602306 2:-133144 MsG0280006296.01.T01:CDS
AAGGTGTGGGTGATGTTGGA+AGG 0.605998 2:+134088 None:intergenic
GAGTTTAGGTACACGAGCGT+AGG 0.606394 2:+134009 None:intergenic
AACAGTTACTCTGGCCGATG+CGG 0.608462 2:-133587 MsG0280006296.01.T01:CDS
AGTTCATGACTTCGGAAGAG+AGG 0.611942 2:+132987 None:intergenic
CTAACTAACAGAGACAGATC+CGG 0.613489 2:+134670 None:intergenic
ACATATCCTCCTCTTCGGAG+GGG 0.614099 2:+134128 None:intergenic
AAATGTTGAAGAGATGGGAG+TGG 0.614619 2:+133921 None:intergenic
AGGGTAAAGGTCCCCTGGTG+AGG 0.616195 2:+133975 None:intergenic
AAGCCCTCCAGAAAAGTTGG+TGG 0.617230 2:+134059 None:intergenic
AAGCAACAGCAACAGCACTC+TGG 0.619654 2:-134445 MsG0280006296.01.T01:CDS
AATCTCTACGTACATGCGTA+CGG 0.624801 2:-134642 MsG0280006296.01.T01:five_prime_UTR
CGGCCTCGGCCATAACGGGA+AGG 0.626778 2:+133415 None:intergenic
TTGGATTGGATTGGATGGCG+AGG 0.628726 2:-134507 MsG0280006296.01.T01:exon
TCAGGCAAAGACAAATCCAA+AGG 0.629865 2:+134881 None:intergenic
TTGGAAGGTAGTGTTCATCT+GGG 0.631422 2:+133242 None:intergenic
CGCTTTCATGTACCTCACCA+GGG 0.635577 2:-133987 MsG0280006296.01.T01:CDS
GAATATAACCAGGAGGAGCG+TGG 0.637995 2:+133894 None:intergenic
CTATATAAACAGCAAGTGCA+CGG 0.643830 2:+133320 None:intergenic
ATTCAAACAGAACAGTCACA+TGG 0.646779 2:-133189 MsG0280006296.01.T01:CDS
GAATATCAGGAAGCATATTG+CGG 0.649024 2:+133386 None:intergenic
GGGAGGGACAATATAACTGT+CGG 0.656711 2:-133127 MsG0280006296.01.T01:CDS
GATCAAACTTGCGAGCAAAG+AGG 0.662138 2:+133035 None:intergenic
TGGATGGCGAGGATGCGTGG+AGG 0.662304 2:-134496 MsG0280006296.01.T01:CDS
ACCATGGAACATATTCAGGA+AGG 0.662805 2:+133219 None:intergenic
TCGGAAGAGAGGTCAAGCAA+GGG 0.668978 2:+132998 None:intergenic
TTCAAACAGAACAGTCACAT+GGG 0.669144 2:-133188 MsG0280006296.01.T01:CDS
TCATCCGGCAACCTACGGGA+GGG 0.670560 2:-133143 MsG0280006296.01.T01:CDS
TTACTCTGGCCGATGCGGAG+AGG 0.672407 2:-133582 MsG0280006296.01.T01:CDS
GTAGTGAATGTGAGAAGTTG+TGG 0.678670 2:+134351 None:intergenic
TGAAAGAATCTCTCCCAGAG+TGG 0.689461 2:+133947 None:intergenic
GCTTTCATGTACCTCACCAG+GGG 0.715038 2:-133986 MsG0280006296.01.T01:CDS
GAAACGTTGAGAATATAACC+AGG 0.715720 2:+133884 None:intergenic
TTGGTGGTCAGAGAAGGTGT+GGG 0.735159 2:+134075 None:intergenic
TAACAGAGACAGATCCGGTG+CGG 0.746652 2:+134675 None:intergenic
ACGTTGAGAATATAACCAGG+AGG 0.765757 2:+133887 None:intergenic
TTGATGATCGGTGATCGCGG+CGG 0.769022 2:-134551 MsG0280006296.01.T01:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTACTATGATATGATTATT+AGG + Chr2:133006-133025 None:intergenic 15.0%
!! TTACTATGATATGATTATTA+GGG + Chr2:133005-133024 None:intergenic 15.0%
!! AAATTAAAAGTTCATGACTT+CGG + Chr2:134643-134662 None:intergenic 20.0%
!!! TATAGTTTTGATGATTTAGT+GGG + Chr2:133937-133956 None:intergenic 20.0%
!!! TTATAGTTTTGATGATTTAG+TGG + Chr2:133938-133957 None:intergenic 20.0%
!!! TTTGTTTTTTTGCTGTTTTT+GGG + Chr2:132789-132808 None:intergenic 20.0%
! AAGTTTCCTTGATAGAATTA+AGG + Chr2:133812-133831 None:intergenic 25.0%
! AATAATAAGAATTGGATCCT+TGG - Chr2:133035-133054 MsG0280006296.01.T01:CDS 25.0%
! AATGAATTGTTTGTACTTGT+AGG - Chr2:133847-133866 MsG0280006296.01.T01:CDS 25.0%
! AGAATCGAAGATATTGAAAA+TGG + Chr2:132904-132923 None:intergenic 25.0%
! AGTTTCCTTGATAGAATTAA+GGG + Chr2:133811-133830 None:intergenic 25.0%
! ATCTGAATTATATGGACAAA+GGG + Chr2:134547-134566 None:intergenic 25.0%
! ATGAATTGTTTGTACTTGTA+GGG - Chr2:133848-133867 MsG0280006296.01.T01:CDS 25.0%
! GAAGTCATATCTGAATTATA+TGG + Chr2:134555-134574 None:intergenic 25.0%
! GATATAAATGTTGAAGAGAT+GGG + Chr2:133706-133725 None:intergenic 25.0%
! GTTTATGATTCATTCATACA+TGG + Chr2:133886-133905 None:intergenic 25.0%
! TATCTGAATTATATGGACAA+AGG + Chr2:134548-134567 None:intergenic 25.0%
! TGAAAATATGAGTAAAGAGA+TGG + Chr2:133912-133931 None:intergenic 25.0%
!! TGTATTGATAGATTCCTTAA+TGG + Chr2:134873-134892 None:intergenic 25.0%
!! TTTTCAATATCTTCGATTCT+TGG - Chr2:132904-132923 MsG0280006296.01.T01:three_prime_UTR 25.0%
!!! GTTTGTTTTTTTGCTGTTTT+TGG + Chr2:132790-132809 None:intergenic 25.0%
AAATCCTCTACCAAAATCTA+GGG + Chr2:134723-134742 None:intergenic 30.0%
AATATGAGTAAAGAGATGGA+TGG + Chr2:133908-133927 None:intergenic 30.0%
AGTAAGAAATCATTTCGCAT+TGG - Chr2:134756-134775 MsG0280006296.01.T01:five_prime_UTR 30.0%
ATGAGATATCTGTAAACAGT+AGG + Chr2:134147-134166 None:intergenic 30.0%
GACTGTTCTGTTTGAATTAA+GGG + Chr2:134427-134446 None:intergenic 30.0%
GGATATAAATGTTGAAGAGA+TGG + Chr2:133707-133726 None:intergenic 30.0%
GTTTCCTTGATAGAATTAAG+GGG + Chr2:133810-133829 None:intergenic 30.0%
TAGGGATAGTTGTATTTCTT+AGG + Chr2:133594-133613 None:intergenic 30.0%
TCATCAATCAATTGAATCCA+AGG + Chr2:133055-133074 None:intergenic 30.0%
TCGAAGATATTGAAAATGGA+AGG + Chr2:132900-132919 None:intergenic 30.0%
TCTATTGATGTATGTACAAG+AGG - Chr2:134665-134684 MsG0280006296.01.T01:five_prime_UTR 30.0%
TGACTGTTCTGTTTGAATTA+AGG + Chr2:134428-134447 None:intergenic 30.0%
TGAGATATCTGTAAACAGTA+GGG + Chr2:134146-134165 None:intergenic 30.0%
TTGATAGATTCCTTAATGGA+AGG + Chr2:134869-134888 None:intergenic 30.0%
TTTCCTTGATAGAATTAAGG+GGG + Chr2:133809-133828 None:intergenic 30.0%
! ACAGGTATTGTTAGAGAATT+TGG - Chr2:134792-134811 MsG0280006296.01.T01:five_prime_UTR 30.0%
! CAGGTATTGTTAGAGAATTT+GGG - Chr2:134793-134812 MsG0280006296.01.T01:five_prime_UTR 30.0%
! GGATTCAATTGATTGATGAT+CGG - Chr2:133056-133075 MsG0280006296.01.T01:CDS 30.0%
! TTGTTGTTGTTGTTGTTGTT+GGG + Chr2:133405-133424 None:intergenic 30.0%
!! ATGAGTTTTGTCTTATTCAC+AGG - Chr2:133996-134015 MsG0280006296.01.T01:CDS 30.0%
!!! TATAACTGTCGGTTTTATAC+AGG - Chr2:134503-134522 MsG0280006296.01.T01:exon 30.0%
AAAGACAAATCCAAAGGGAA+AGG + Chr2:132735-132754 None:intergenic 35.0%
AAGACAAATCCAAAGGGAAA+GGG + Chr2:132734-132753 None:intergenic 35.0%
AAGACATCAGAAGAAGAAGA+AGG + Chr2:133345-133364 None:intergenic 35.0%
AAGCAGGCTTACAGTATTTA+CGG + Chr2:134353-134372 None:intergenic 35.0%
AGAAGAAGAAGAAGGTTGTT+GGG + Chr2:133337-133356 None:intergenic 35.0%
ATACAGGCTATAAGGAACAA+TGG - Chr2:134519-134538 MsG0280006296.01.T01:five_prime_UTR 35.0%
ATTCAAACAGAACAGTCACA+TGG - Chr2:134430-134449 MsG0280006296.01.T01:CDS 35.0%
CTATATAAACAGCAAGTGCA+CGG + Chr2:134302-134321 None:intergenic 35.0%
CTTACAGTATTTACGGAAGA+GGG + Chr2:134346-134365 None:intergenic 35.0%
GAAACGTTGAGAATATAACC+AGG + Chr2:133738-133757 None:intergenic 35.0%
GAAATCCTCTACCAAAATCT+AGG + Chr2:134724-134743 None:intergenic 35.0%
GTTGTATTTCTTAGGAACCA+AGG + Chr2:133586-133605 None:intergenic 35.0%
TGTTTGAATTAAGGGAACCA+TGG + Chr2:134419-134438 None:intergenic 35.0%
TTCAAACAGAACAGTCACAT+GGG - Chr2:134431-134450 MsG0280006296.01.T01:CDS 35.0%
TTGTGGTGATTTGATTGGAT+TGG - Chr2:133098-133117 MsG0280006296.01.T01:CDS 35.0%
TTGTGTTGTGGTGATTTGAT+TGG - Chr2:133093-133112 MsG0280006296.01.T01:CDS 35.0%
! GAATATCAGGAAGCATATTG+CGG + Chr2:134236-134255 None:intergenic 35.0%
! GCATTTTGTTCCTTCCATTA+AGG - Chr2:134856-134875 MsG0280006296.01.T01:five_prime_UTR 35.0%
! GTGATTTGATTGGATTGGAT+TGG - Chr2:133103-133122 MsG0280006296.01.T01:CDS 35.0%
! GTTGTTGTTGTTGTTGTTGT+TGG + Chr2:133406-133425 None:intergenic 35.0%
! TCTTCGATTCTTGGTAGTTA+TGG - Chr2:132913-132932 MsG0280006296.01.T01:three_prime_UTR 35.0%
! TTTGATTGGATTGGATTGGA+TGG - Chr2:133107-133126 MsG0280006296.01.T01:CDS 35.0%
!! TAGTCTTAGTCCCTAGATTT+TGG - Chr2:134710-134729 MsG0280006296.01.T01:five_prime_UTR 35.0%
!! TCGGTTTTATACAGGCTATA+AGG - Chr2:134511-134530 MsG0280006296.01.T01:exon 35.0%
!! TTATTCACAGGCTGTTTCTT+GGG - Chr2:134008-134027 MsG0280006296.01.T01:CDS 35.0%
AAATGTTGAAGAGATGGGAG+TGG + Chr2:133701-133720 None:intergenic 40.0%
AATCTCTACGTACATGCGTA+CGG - Chr2:132977-132996 MsG0280006296.01.T01:exon 40.0%
ACATATTCAGGAAGGTTGGA+AGG + Chr2:134395-134414 None:intergenic 40.0%
ACCATGGAACATATTCAGGA+AGG + Chr2:134403-134422 None:intergenic 40.0%
ACCTTCCTGAATATGTTCCA+TGG - Chr2:134399-134418 MsG0280006296.01.T01:CDS 40.0%
ACGTTGAGAATATAACCAGG+AGG + Chr2:133735-133754 None:intergenic 40.0%
AGACAAATCCAAAGGGAAAG+GGG + Chr2:132733-132752 None:intergenic 40.0%
AGGTACATGAAAGCGAGTTT+AGG + Chr2:133627-133646 None:intergenic 40.0%
ATTGGTAGATCTGTCTGTAC+AGG - Chr2:134774-134793 MsG0280006296.01.T01:five_prime_UTR 40.0%
CAGAAGAAGAAGAAGGTTGT+TGG + Chr2:133338-133357 None:intergenic 40.0%
CAGGCAAAGACAAATCCAAA+GGG + Chr2:132740-132759 None:intergenic 40.0%
CAGTGCTTAAGCTGAATATC+AGG + Chr2:134249-134268 None:intergenic 40.0%
CATCCCCCTTAATTCTATCA+AGG - Chr2:133803-133822 MsG0280006296.01.T01:intron 40.0%
CTAACTAACAGAGACAGATC+CGG + Chr2:132952-132971 None:intergenic 40.0%
CTGATATTCAGCTTAAGCAC+TGG - Chr2:134247-134266 MsG0280006296.01.T01:CDS 40.0%
GATGTTGGAAGGATGAAGAA+AGG + Chr2:133523-133542 None:intergenic 40.0%
GCTTACAGTATTTACGGAAG+AGG + Chr2:134347-134366 None:intergenic 40.0%
GTAGTGAATGTGAGAAGTTG+TGG + Chr2:133271-133290 None:intergenic 40.0%
TATGATGATCCTTCCCGTTA+TGG - Chr2:134195-134214 MsG0280006296.01.T01:CDS 40.0%
TCAGGCAAAGACAAATCCAA+AGG + Chr2:132741-132760 None:intergenic 40.0%
TGGAACATATTCAGGAAGGT+TGG + Chr2:134399-134418 None:intergenic 40.0%
TTGGAAGGTAGTGTTCATCT+GGG + Chr2:134380-134399 None:intergenic 40.0%
! CGATTCTTGGTAGTTATGGT+AGG - Chr2:132917-132936 MsG0280006296.01.T01:three_prime_UTR 40.0%
! GGGATATTGCGTCGATAAAA+GGG + Chr2:133771-133790 None:intergenic 40.0%
! TACGGAAGAGGGAAAAGTAT+TGG + Chr2:134335-134354 None:intergenic 40.0%
! TGGGATATTGCGTCGATAAA+AGG + Chr2:133772-133791 None:intergenic 40.0%
! TGTTGTTGTTGGGTTGTTGT+TGG + Chr2:133395-133414 None:intergenic 40.0%
!! ACGGAAGAGGGAAAAGTATT+GGG + Chr2:134334-134353 None:intergenic 40.0%
!! CTTATTCACAGGCTGTTTCT+TGG - Chr2:134007-134026 MsG0280006296.01.T01:CDS 40.0%
!! TAGTCCCTAGATTTTGGTAG+AGG - Chr2:134716-134735 MsG0280006296.01.T01:five_prime_UTR 40.0%
!! TATTCACAGGCTGTTTCTTG+GGG - Chr2:134009-134028 MsG0280006296.01.T01:CDS 40.0%
!!! TTGTTGCTTGTTTTTGCTGC+TGG - Chr2:133228-133247 MsG0280006296.01.T01:CDS 40.0%
AACATATCCTCCTCTTCGGA+GGG + Chr2:133495-133514 None:intergenic 45.0%
ACAGTAGGGAAGTTGTAGAC+TGG + Chr2:134132-134151 None:intergenic 45.0%
AGTTATATTGTCCCTCCCGT+AGG + Chr2:134490-134509 None:intergenic 45.0%
AGTTCATGACTTCGGAAGAG+AGG + Chr2:134635-134654 None:intergenic 45.0%
AGTTTAGGTACACGAGCGTA+GGG + Chr2:133612-133631 None:intergenic 45.0%
ATTTATATCCACGCTCCTCC+TGG - Chr2:133717-133736 MsG0280006296.01.T01:intron 45.0%
CAAGTTTGATCCCAGTGCAT+TGG - Chr2:134596-134615 MsG0280006296.01.T01:five_prime_UTR 45.0%
CAGTAGGGAAGTTGTAGACT+GGG + Chr2:134131-134150 None:intergenic 45.0%
CTCCAACATATCCTCCTCTT+CGG + Chr2:133499-133518 None:intergenic 45.0%
GATCAAACTTGCGAGCAAAG+AGG + Chr2:134587-134606 None:intergenic 45.0%
GCGAGCAAAGAGGTAACAAA+TGG + Chr2:134577-134596 None:intergenic 45.0%
GGGAACCATGGAACATATTC+AGG + Chr2:134407-134426 None:intergenic 45.0%
GGGAGGGACAATATAACTGT+CGG - Chr2:134492-134511 MsG0280006296.01.T01:CDS 45.0%
GGGATGTTTGTCTCTCTATC+TGG + Chr2:132769-132788 None:intergenic 45.0%
GTTGGAAGGTAGTGTTCATC+TGG + Chr2:134381-134400 None:intergenic 45.0%
TCTCTCTATCTGGTCTGTTC+AGG + Chr2:132759-132778 None:intergenic 45.0%
TGAAAAGTCGAGCAGTGCAT+TGG + Chr2:134073-134092 None:intergenic 45.0%
TGAAAGAATCTCTCCCAGAG+TGG + Chr2:133675-133694 None:intergenic 45.0%
TTCTTGGGGAACAGTTACTC+TGG - Chr2:134023-134042 MsG0280006296.01.T01:CDS 45.0%
TTTACCCTTGTTGCCACTCT+GGG - Chr2:133659-133678 MsG0280006296.01.T01:intron 45.0%
! CTCTGGGAGAGATTCTTTCA+AGG - Chr2:133675-133694 MsG0280006296.01.T01:intron 45.0%
! GTTGTTGGGTTGTTGTTGGA+GGG + Chr2:133391-133410 None:intergenic 45.0%
! TCTCTGACCACCAACTTTTC+TGG - Chr2:133553-133572 MsG0280006296.01.T01:CDS 45.0%
! TGACCACCAACTTTTCTGGA+GGG - Chr2:133557-133576 MsG0280006296.01.T01:CDS 45.0%
! TGATTGATGATCGGTGATCG+CGG - Chr2:133065-133084 MsG0280006296.01.T01:CDS 45.0%
! TGTTGTTGGGTTGTTGTTGG+AGG + Chr2:133392-133411 None:intergenic 45.0%
!! GAAAAGTTGGTGGTCAGAGA+AGG + Chr2:133553-133572 None:intergenic 45.0%
!! GCACTCTGGTTTGGTTAGAT+TGG - Chr2:133188-133207 MsG0280006296.01.T01:CDS 45.0%
!! ATAATAATAATAATAAGAAT+TGG - Chr2:133027-133046 MsG0280006296.01.T01:CDS 5.0%
AACAGTTACTCTGGCCGATG+CGG - Chr2:134032-134051 MsG0280006296.01.T01:CDS 50.0%
AAGCAACAGCAACAGCACTC+TGG - Chr2:133174-133193 MsG0280006296.01.T01:CDS 50.0%
AAGCCCTCCAGAAAAGTTGG+TGG + Chr2:133563-133582 None:intergenic 50.0%
AAGGTGTGGGTGATGTTGGA+AGG + Chr2:133534-133553 None:intergenic 50.0%
ACAGCAACAGCACTCTGGTT+TGG - Chr2:133179-133198 MsG0280006296.01.T01:CDS 50.0%
ACATATCCTCCTCTTCGGAG+GGG + Chr2:133494-133513 None:intergenic 50.0%
AGGAAGCCCTCCAGAAAAGT+TGG + Chr2:133566-133585 None:intergenic 50.0%
CAACATATCCTCCTCTTCGG+AGG + Chr2:133496-133515 None:intergenic 50.0%
CAGAGTGGCAACAAGGGTAA+AGG + Chr2:133660-133679 None:intergenic 50.0%
CGCTTTCATGTACCTCACCA+GGG - Chr2:133632-133651 MsG0280006296.01.T01:intron 50.0%
CTCCGAAGAGGAGGATATGT+TGG - Chr2:133494-133513 MsG0280006296.01.T01:CDS 50.0%
CTTTACCCTTGTTGCCACTC+TGG - Chr2:133658-133677 MsG0280006296.01.T01:intron 50.0%
GAAGCATATTGCGGCTGTAG+CGG + Chr2:134227-134246 None:intergenic 50.0%
GAATATAACCAGGAGGAGCG+TGG + Chr2:133728-133747 None:intergenic 50.0%
GAGTTTAGGTACACGAGCGT+AGG + Chr2:133613-133632 None:intergenic 50.0%
GCTTTCATGTACCTCACCAG+GGG - Chr2:133633-133652 MsG0280006296.01.T01:intron 50.0%
TAACAGAGACAGATCCGGTG+CGG + Chr2:132947-132966 None:intergenic 50.0%
TCGACGCAATATCCCAAGTC+AGG - Chr2:133776-133795 MsG0280006296.01.T01:intron 50.0%
TCGCTTTCATGTACCTCACC+AGG - Chr2:133631-133650 MsG0280006296.01.T01:intron 50.0%
TCGGAAGAGAGGTCAAGCAA+GGG + Chr2:134624-134643 None:intergenic 50.0%
TGTTCATCTGGGTAGCAAGC+AGG + Chr2:134369-134388 None:intergenic 50.0%
TTCGGAAGAGAGGTCAAGCA+AGG + Chr2:134625-134644 None:intergenic 50.0%
! AGAGAAGGTGTGGGTGATGT+TGG + Chr2:133538-133557 None:intergenic 50.0%
! CTGACCACCAACTTTTCTGG+AGG - Chr2:133556-133575 MsG0280006296.01.T01:CDS 50.0%
! TGCTGTTGCTGTTGCTTCGT+CGG + Chr2:133171-133190 None:intergenic 50.0%
! TTGGATTGGATTGGATGGCG+AGG - Chr2:133112-133131 MsG0280006296.01.T01:CDS 50.0%
! TTGGTGGTCAGAGAAGGTGT+GGG + Chr2:133547-133566 None:intergenic 50.0%
!! ACTTTTCTGGAGGGCTTCCT+TGG - Chr2:133566-133585 MsG0280006296.01.T01:CDS 50.0%
!! TTATGGTAGGAGTACCGCAC+CGG - Chr2:132930-132949 MsG0280006296.01.T01:three_prime_UTR 50.0%
!! TTTGCTGCTGGTGTCGTCAT+TGG - Chr2:133240-133259 MsG0280006296.01.T01:CDS 50.0%
AAGCAAGGGCTCCAATGCAC+TGG + Chr2:134610-134629 None:intergenic 55.0%
ACTGGCGCAAAGGCTCTCAA+TGG - Chr2:134265-134284 MsG0280006296.01.T01:CDS 55.0%
AGCAAGGGCTCCAATGCACT+GGG + Chr2:134609-134628 None:intergenic 55.0%
AGGGGGATGCATACCTGACT+TGG + Chr2:133792-133811 None:intergenic 55.0%
ATATCCTCCTCTTCGGAGGG+GGG + Chr2:133492-133511 None:intergenic 55.0%
ATGCGTGGAGGAGGAGAAGA+AGG - Chr2:133135-133154 MsG0280006296.01.T01:CDS 55.0%
CAACAAGGGTAAAGGTCCCC+TGG + Chr2:133652-133671 None:intergenic 55.0%
CATATCCTCCTCTTCGGAGG+GGG + Chr2:133493-133512 None:intergenic 55.0%
CTCTCCCAGAGTGGCAACAA+GGG + Chr2:133666-133685 None:intergenic 55.0%
GAACAGTCACATGGGTCGAC+TGG - Chr2:134439-134458 MsG0280006296.01.T01:CDS 55.0%
GGGGGATGCATACCTGACTT+GGG + Chr2:133791-133810 None:intergenic 55.0%
GTCAATGCTCGGTCCTCATC+CGG - Chr2:134461-134480 MsG0280006296.01.T01:CDS 55.0%
TCTCTCCCAGAGTGGCAACA+AGG + Chr2:133667-133686 None:intergenic 55.0%
! TGGGTCGACTGGTCAATGCT+CGG - Chr2:134450-134469 MsG0280006296.01.T01:CDS 55.0%
! TTGATGATCGGTGATCGCGG+CGG - Chr2:133068-133087 MsG0280006296.01.T01:CDS 55.0%
!! CAGCTTAAGCACTGGCGCAA+AGG - Chr2:134255-134274 MsG0280006296.01.T01:CDS 55.0%
!! GTTGGTGGTCAGAGAAGGTG+TGG + Chr2:133548-133567 None:intergenic 55.0%
AGGGTAAAGGTCCCCTGGTG+AGG + Chr2:133647-133666 None:intergenic 60.0%
ATCGCGGCGGCATTGTGTTG+TGG - Chr2:133081-133100 MsG0280006296.01.T01:CDS 60.0%
GATCCTTCCCGTTATGGCCG+AGG - Chr2:134201-134220 MsG0280006296.01.T01:CDS 60.0%
GATTGGATGGCGAGGATGCG+TGG - Chr2:133120-133139 MsG0280006296.01.T01:CDS 60.0%
GGTCCTCATCCGGCAACCTA+CGG - Chr2:134471-134490 MsG0280006296.01.T01:CDS 60.0%
GTCCTCATCCGGCAACCTAC+GGG - Chr2:134472-134491 MsG0280006296.01.T01:CDS 60.0%
TAGTAGCCGCCTCTCCGCAT+CGG + Chr2:134049-134068 None:intergenic 60.0%
TATTGCGGCTGTAGCGGCCT+CGG + Chr2:134221-134240 None:intergenic 60.0%
TCATCCGGCAACCTACGGGA+GGG - Chr2:134476-134495 MsG0280006296.01.T01:CDS 60.0%
TGTAGCGGCCTCGGCCATAA+CGG + Chr2:134212-134231 None:intergenic 60.0%
TTACTCTGGCCGATGCGGAG+AGG - Chr2:134037-134056 MsG0280006296.01.T01:CDS 60.0%
TTGTCCCTCCCGTAGGTTGC+CGG + Chr2:134483-134502 None:intergenic 60.0%
ATGGCGAGGATGCGTGGAGG+AGG - Chr2:133126-133145 MsG0280006296.01.T01:CDS 65.0%
CTCATCCGGCAACCTACGGG+AGG - Chr2:134475-134494 MsG0280006296.01.T01:CDS 65.0%
CTCCCGTAGGTTGCCGGATG+AGG + Chr2:134477-134496 None:intergenic 65.0%
GGAGGAGGAGGAGGAGAAGG+AGG + Chr2:133456-133475 None:intergenic 65.0%
GGAGGAGGAGGAGGAGGAGA+AGG + Chr2:133459-133478 None:intergenic 65.0%
GTAGCGGCCTCGGCCATAAC+GGG + Chr2:134211-134230 None:intergenic 65.0%
TGGATGGCGAGGATGCGTGG+AGG - Chr2:133123-133142 MsG0280006296.01.T01:CDS 65.0%
ACCACCCCCCTCCGAAGAGG+AGG - Chr2:133485-133504 MsG0280006296.01.T01:CDS 70.0%
CTCTGGCCGATGCGGAGAGG+CGG - Chr2:134040-134059 MsG0280006296.01.T01:CDS 70.0%
GGAGGAGGAGGAGGAGGAGG+AGG + Chr2:133462-133481 None:intergenic 70.0%
GGTGGAGGAGGAGGAGGAGG+AGG + Chr2:133468-133487 None:intergenic 70.0%
TCCACCACCCCCCTCCGAAG+AGG - Chr2:133482-133501 MsG0280006296.01.T01:CDS 70.0%
TCCTCCTCTTCGGAGGGGGG+TGG + Chr2:133489-133508 None:intergenic 70.0%
TCCTCTTCGGAGGGGGGTGG+TGG + Chr2:133486-133505 None:intergenic 70.0%
! CGGCCTCGGCCATAACGGGA+AGG + Chr2:134207-134226 None:intergenic 70.0%
! TCTTCGGAGGGGGGTGGTGG+AGG + Chr2:133483-133502 None:intergenic 70.0%
!! GGTGGTGGAGGAGGAGGAGG+AGG + Chr2:133471-133490 None:intergenic 70.0%
!! GAGGGGGGTGGTGGAGGAGG+AGG + Chr2:133477-133496 None:intergenic 75.0%
!! GGGGGTGGTGGAGGAGGAGG+AGG + Chr2:133474-133493 None:intergenic 75.0%
!! TCGGAGGGGGGTGGTGGAGG+AGG + Chr2:133480-133499 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr2 gene 132731 134910 132731 ID=MsG0280006296.01;Name=MsG0280006296.01
Chr2 mRNA 132731 134910 132731 ID=MsG0280006296.01.T01;Parent=MsG0280006296.01;Name=MsG0280006296.01.T01;_AED=0.12;_eAED=0.12;_QI=395|1|1|1|1|1|2|251|437
Chr2 exon 132731 133623 132731 ID=MsG0280006296.01.T01:exon:457;Parent=MsG0280006296.01.T01
Chr2 exon 133844 134910 133844 ID=MsG0280006296.01.T01:exon:456;Parent=MsG0280006296.01.T01
Chr2 five_prime_UTR 134516 134910 134516 ID=MsG0280006296.01.T01:five_prime_utr;Parent=MsG0280006296.01.T01
Chr2 CDS 133844 134515 133844 ID=MsG0280006296.01.T01:cds;Parent=MsG0280006296.01.T01
Chr2 CDS 132982 133623 132982 ID=MsG0280006296.01.T01:cds;Parent=MsG0280006296.01.T01
Chr2 three_prime_UTR 132731 132981 132731 ID=MsG0280006296.01.T01:three_prime_utr;Parent=MsG0280006296.01.T01
Gene Sequence

>MsG0280006296.01.T01

ATGGCGAGGATGCGTGGAGGAGGAGAAGAAGGAGACAGAGATCCGACGAAGCAACAGCAACAGCACTCTGGTTTGGTTAGATTGGTACAACAACTTGTTACATTGTTGCTTGTTTTTGCTGCTGGTGTCGTCATTGGTTTAACCACAACTTCTCACATTCACTACTTCAATACAAGTCACAACAATAATAACTATCTTCATTTCATTTCCCAACAACCTTCTTCTTCTTCTGATGTCTTCAATCTCGATACTACTATTCACACCCTCCAACAACAACCCAACAACAACAACAACAACAACTGTAACTGTAATTGTACAATCATTGAACCTCCTTCTCCTCCTCCTCCTCCTCCTCCTCCACCACCCCCCTCCGAAGAGGAGGATATGTTGGAGTCCTTTCTTCATCCTTCCAACATCACCCACACCTTCTCTGACCACCAACTTTTCTGGAGGGCTTCCTTGGTTCCTAAGAAATACAACTATCCCTACGCTCGTGTACCTAAACTCGCTTTCATGTACCTCACCAGGGGACCTTTACCCTTGTTGCCACTCTGGGAGAGATTCTTTCAAGGCCACTCCCATCTCTTCAACATTTATATCCACGCTCCTCCTGGTTATATTCTCAACGTTTCTGATTCTTCTCCCTTTTATCGACGCAATATCCCAAGTCAGGCTGTTTCTTGGGGAACAGTTACTCTGGCCGATGCGGAGAGGCGGCTACTAGCCAATGCACTGCTCGACTTTTCAAATGAGCGCTTTGTTCTACTCTCAGAGAGTTGCATCCCAGTCTACAACTTCCCTACTGTTTACAGATATCTCATTGATTCTGCACACAGCTTTGTTGAGTCATATGATGATCCTTCCCGTTATGGCCGAGGCCGCTACAGCCGCAATATGCTTCCTGATATTCAGCTTAAGCACTGGCGCAAAGGCTCTCAATGGTTCGAACTCAACCGTGCACTTGCTGTTTATATAGTCTCTGACACCCAATACTTTTCCCTCTTCCGTAAATACTGTAAGCCTGCTTGCTACCCAGATGAACACTACCTTCCAACCTTCCTGAATATGTTCCATGGTTCCCTTAATTCAAACAGAACAGTCACATGGGTCGACTGGTCAATGCTCGGTCCTCATCCGGCAACCTACGGGAGGGACAATATAACTGTCGGTTTTATACAGGCTATAAGGAACAATGGATCCCTTTGTCCATATAATTCAGATATGACTTCCATTTGTTACCTCTTTGCTCGCAAGTTTGATCCCAGTGCATTGGAGCCCTTGCTTGACCTCTCTTCCGAAGTCATGAACTTTTAA
Protein sequence

>MsG0280006296.01.T01

MARMRGGGEEGDRDPTKQQQQHSGLVRLVQQLVTLLLVFAAGVVIGLTTTSHIHYFNTSHNNNNYLHFISQQPSSSSDVFNLDTTIHTLQQQPNNNNNNNCNCNCTIIEPPSPPPPPPPPPPPSEEEDMLESFLHPSNITHTFSDHQLFWRASLVPKKYNYPYARVPKLAFMYLTRGPLPLLPLWERFFQGHSHLFNIYIHAPPGYILNVSDSSPFYRRNIPSQAVSWGTVTLADAERRLLANALLDFSNERFVLLSESCIPVYNFPTVYRYLIDSAHSFVESYDDPSRYGRGRYSRNMLPDIQLKHWRKGSQWFELNRALAVYIVSDTQYFSLFRKYCKPACYPDEHYLPTFLNMFHGSLNSNRTVTWVDWSMLGPHPATYGRDNITVGFIQAIRNNGSLCPYNSDMTSICYLFARKFDPSALEPLLDLSSEVMNF*