AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280006520.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280006520.01.T01 MTR_2g010020 89.645 705 22 3 1 683 1 676 0.0 1221
MsG0280006520.01.T01 MTR_2g010020 89.518 706 22 4 1 683 1 677 0.0 1217
MsG0280006520.01.T01 MTR_4g092920 81.883 701 76 3 6 683 3 675 0.0 1125
MsG0280006520.01.T01 MTR_4g092920 82.250 569 50 3 138 683 1 541 0.0 914
MsG0280006520.01.T01 MTR_2g005690 49.327 669 280 5 31 670 46 684 0.0 630
MsG0280006520.01.T01 MTR_7g099680 45.619 662 280 12 57 674 10 635 0.0 532
MsG0280006520.01.T01 MTR_4g063720 46.975 628 254 11 57 640 10 602 6.60e-180 527
MsG0280006520.01.T01 MTR_4g063710 46.975 628 254 11 57 640 10 602 1.49e-179 526
MsG0280006520.01.T01 MTR_7g024390 46.815 628 255 11 57 640 10 602 1.20e-178 523
MsG0280006520.01.T01 MTR_7g024580 45.942 653 269 14 57 662 10 625 4.01e-177 520
MsG0280006520.01.T01 MTR_8g099795 46.906 614 250 12 56 629 38 615 2.03e-174 513
MsG0280006520.01.T01 MTR_8g099945 46.743 614 251 12 56 629 38 615 3.41e-174 513
MsG0280006520.01.T01 MTR_4g130540 46.388 623 254 11 57 636 9 594 4.27e-174 512
MsG0280006520.01.T01 MTR_4g063720 44.667 600 238 13 57 640 10 531 9.64e-153 454
MsG0280006520.01.T01 MTR_2g017730 42.270 608 267 13 57 621 9 575 9.83e-146 437
MsG0280006520.01.T01 MTR_7g451380 42.491 586 262 10 57 602 10 560 6.99e-142 428
MsG0280006520.01.T01 MTR_7g025770 41.506 624 291 14 49 632 2 591 2.52e-141 427
MsG0280006520.01.T01 MTR_7g025630 41.783 572 274 12 57 604 10 546 1.06e-139 422
MsG0280006520.01.T01 MTR_7g021440 40.806 620 293 13 57 636 10 595 4.31e-139 421
MsG0280006520.01.T01 MTR_6g033760 39.869 612 295 12 57 629 10 587 4.59e-139 421
MsG0280006520.01.T01 MTR_7g025760 41.017 590 268 11 57 604 10 561 5.04e-139 421
MsG0280006520.01.T01 MTR_7g026030 41.809 586 268 12 57 604 10 560 1.31e-138 420
MsG0280006520.01.T01 MTR_7g026090 39.841 630 297 12 57 638 10 605 6.88e-138 418
MsG0280006520.01.T01 MTR_7g025620 40.388 619 294 13 57 635 10 593 3.98e-137 416
MsG0280006520.01.T01 MTR_2g038260 40.129 618 292 14 57 632 10 591 1.34e-136 414
MsG0280006520.01.T01 MTR_5g066800 39.171 651 306 15 57 654 10 623 5.16e-135 411
MsG0280006520.01.T01 MTR_4g079590 40.968 620 284 16 57 632 10 591 2.27e-134 409
MsG0280006520.01.T01 MTR_7g026170 39.564 642 306 16 57 654 10 613 8.95e-134 407
MsG0280006520.01.T01 MTR_8g032650 41.638 586 269 13 57 604 10 560 9.36e-134 407
MsG0280006520.01.T01 MTR_7g025720 41.952 584 266 12 57 602 10 558 1.30e-133 407
MsG0280006520.01.T01 MTR_7g025820 40.646 588 273 12 57 604 10 561 7.67e-133 404
MsG0280006520.01.T01 MTR_7g011590 40.492 610 296 14 57 636 10 582 2.61e-132 403
MsG0280006520.01.T01 MTR_2g032550 40.325 615 290 13 57 629 11 590 3.71e-132 403
MsG0280006520.01.T01 MTR_7g025790 40.614 586 275 13 57 604 10 560 4.84e-132 403
MsG0280006520.01.T01 MTR_7g078190 41.227 587 272 13 57 604 10 562 2.69e-131 401
MsG0280006520.01.T01 MTR_6g033850 39.829 585 281 9 57 604 10 560 4.52e-131 402
MsG0280006520.01.T01 MTR_7g024030 40.614 586 275 12 57 604 10 560 5.12e-131 400
MsG0280006520.01.T01 MTR_7g026110 39.095 619 303 13 57 636 10 593 1.80e-130 399
MsG0280006520.01.T01 MTR_2g022050 40.596 638 279 13 57 629 10 612 7.76e-130 397
MsG0280006520.01.T01 MTR_7g025740 40.271 591 279 13 57 604 10 569 2.45e-129 397
MsG0280006520.01.T01 MTR_7g029415 40.422 616 287 16 55 629 15 591 7.56e-129 395
MsG0280006520.01.T01 MTR_7g074460 40.240 584 259 12 57 602 10 541 1.21e-126 388
MsG0280006520.01.T01 MTR_2g038270 39.228 622 297 14 49 622 2 590 2.50e-126 388
MsG0280006520.01.T01 MTR_6g033870 38.080 625 306 13 57 635 11 600 3.95e-126 389
MsG0280006520.01.T01 MTR_2g437440 39.316 585 264 11 57 602 10 542 1.99e-125 385
MsG0280006520.01.T01 MTR_7g078210 40.444 586 277 13 57 604 10 561 1.76e-124 384
MsG0280006520.01.T01 MTR_6g033820 37.797 590 291 9 57 604 10 565 2.89e-124 385
MsG0280006520.01.T01 MTR_8g103930 37.920 654 303 19 53 654 7 609 1.33e-123 381
MsG0280006520.01.T01 MTR_6g033955 37.966 590 290 9 57 604 10 565 1.50e-123 382
MsG0280006520.01.T01 MTR_4g027145 37.366 653 317 18 57 654 10 625 5.01e-122 377
MsG0280006520.01.T01 MTR_2g032580 37.954 606 272 10 57 622 10 551 9.14e-122 375
MsG0280006520.01.T01 MTR_7g026130 42.495 553 233 16 43 553 1 510 3.66e-119 372
MsG0280006520.01.T01 MTR_1g017130 37.338 616 272 16 57 632 10 551 2.14e-117 364
MsG0280006520.01.T01 MTR_7g025260 39.162 549 263 11 94 604 18 533 5.98e-117 363
MsG0280006520.01.T01 MTR_7g026140 39.389 589 263 17 57 604 10 545 1.03e-116 363
MsG0280006520.01.T01 MTR_6g033800 38.845 502 239 8 138 604 1 469 3.44e-105 332
MsG0280006520.01.T01 MTR_7g035155 34.796 638 288 18 57 654 10 559 6.97e-102 323
MsG0280006520.01.T01 MTR_7g451360 46.579 380 181 8 57 424 10 379 2.73e-100 318
MsG0280006520.01.T01 MTR_7g451360 46.457 127 65 3 478 602 376 501 1.08e-23 106
MsG0280006520.01.T01 MTR_7g007000 37.961 569 272 16 57 604 10 518 3.85e-100 319
MsG0280006520.01.T01 MTR_2g040260 44.935 385 177 5 57 411 1039 1418 2.96e-94 319
MsG0280006520.01.T01 MTR_2g040160 43.928 387 178 6 57 411 1110 1489 1.71e-93 317
MsG0280006520.01.T01 MTR_2g040370 44.784 393 178 6 46 406 1019 1404 7.53e-92 313
MsG0280006520.01.T01 MTR_2g040370 43.896 385 176 6 57 408 1414 1791 5.43e-83 287
MsG0280006520.01.T01 MTR_2g040370 44.784 393 178 6 46 406 1019 1404 1.01e-91 313
MsG0280006520.01.T01 MTR_2g040370 43.687 396 181 7 57 417 1414 1802 2.05e-82 286
MsG0280006520.01.T01 MTR_2g040350 42.308 390 186 7 56 411 820 1204 3.02e-86 295
MsG0280006520.01.T01 MTR_2g032160 41.823 373 174 7 57 393 10 375 7.30e-86 278
MsG0280006520.01.T01 MTR_2g040350 42.308 390 186 7 56 411 1038 1422 8.31e-86 295
MsG0280006520.01.T01 MTR_2g040220 43.045 381 174 6 57 401 1019 1392 7.67e-83 286
MsG0280006520.01.T01 MTR_2g040220 47.475 99 44 1 490 580 1397 1495 2.07e-19 94.0
MsG0280006520.01.T01 MTR_1g041565 33.791 583 249 17 55 602 4 484 7.00e-81 267
MsG0280006520.01.T01 MTR_6g034005 32.794 494 257 11 128 586 2 455 8.01e-74 252
MsG0280006520.01.T01 MTR_1g077230 44.891 274 117 5 57 297 10 282 9.88e-67 221
MsG0280006520.01.T01 MTR_3g051300 33.251 406 232 6 56 427 3 403 2.43e-62 222
MsG0280006520.01.T01 MTR_4g012050 32.843 408 235 5 56 429 3 405 4.15e-61 219
MsG0280006520.01.T01 MTR_2g102180 31.436 404 238 5 56 425 3 401 2.09e-58 212
MsG0280006520.01.T01 MTR_5g092570 30.947 433 251 7 56 447 3 428 7.33e-56 204
MsG0280006520.01.T01 MTR_6g033810 41.877 277 131 6 160 431 40 291 5.89e-55 190
MsG0280006520.01.T01 MTR_7g026080 45.714 245 99 7 49 260 2 245 9.15e-55 188
MsG0280006520.01.T01 MTR_6g033855 34.670 349 136 5 160 505 40 299 2.87e-54 189
MsG0280006520.01.T01 MTR_7g026050 34.957 349 161 7 260 602 1 289 2.76e-50 179
MsG0280006520.01.T01 MTR_5g006180 27.455 550 275 13 49 538 22 507 1.02e-47 177
MsG0280006520.01.T01 MTR_4g088515 36.842 304 133 9 9 270 218 504 1.38e-44 169
MsG0280006520.01.T01 MTR_4g088515 51.042 96 43 2 358 449 521 616 4.72e-21 98.2
MsG0280006520.01.T01 MTR_5g097190 43.578 218 96 7 57 268 159 355 2.84e-44 163
MsG0280006520.01.T01 MTR_2g031670 41.964 224 94 5 77 265 54 276 4.76e-43 159
MsG0280006520.01.T01 MTR_4g107920 27.936 562 283 16 41 540 5 506 1.07e-41 160
MsG0280006520.01.T01 MTR_1207s0010 46.667 165 62 1 160 298 11 175 4.51e-39 142
MsG0280006520.01.T01 MTR_1g077240 39.130 276 123 8 346 609 6 248 7.40e-39 145
MsG0280006520.01.T01 MTR_4g115780 28.265 559 300 14 51 549 135 652 9.09e-38 150
MsG0280006520.01.T01 MTR_3g081170 27.603 413 246 9 47 411 17 424 5.01e-35 142
MsG0280006520.01.T01 MTR_7g026180 50.000 120 56 1 118 233 17 136 6.61e-31 124
MsG0280006520.01.T01 MTR_5g090110 24.440 536 261 16 57 526 29 486 8.44e-31 127
MsG0280006520.01.T01 MTR_7g451390 43.478 161 86 4 480 636 10 169 4.74e-29 114
MsG0280006520.01.T01 MTR_7g074540 39.053 169 73 3 435 602 4 143 7.42e-27 108
MsG0280006520.01.T01 MTR_6g033910 38.333 180 83 5 121 294 20 177 2.34e-26 107
MsG0280006520.01.T01 MTR_6g478100 32.394 213 98 4 83 264 10 207 2.49e-25 107
MsG0280006520.01.T01 MTR_5g005870 27.206 272 155 6 320 582 71 308 8.02e-25 108
MsG0280006520.01.T01 MTR_2g017710 30.584 291 82 9 240 524 17 193 1.20e-21 95.9
MsG0280006520.01.T01 MTR_1g116250 32.099 243 100 7 383 622 73 253 1.61e-21 95.9
MsG0280006520.01.T01 MTR_1g068900 41.667 132 68 5 476 602 29 156 1.96e-20 89.4
MsG0280006520.01.T01 MTR_2g040355 29.187 209 75 4 382 589 92 228 2.21e-15 77.8
MsG0280006520.01.T01 MTR_4g115860 34.167 120 51 1 413 532 30 121 5.14e-14 69.7
MsG0280006520.01.T01 MTR_6g033805 48.438 64 32 1 57 120 10 72 2.27e-12 63.2
MsG0280006520.01.T01 MTR_4g027235 53.125 64 27 2 57 118 10 72 1.48e-11 60.8
MsG0280006520.01.T01 MTR_4g027085 53.125 64 27 2 57 118 10 72 1.48e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280006520.01.T01 AT5G09590 77.715 709 102 4 3 683 2 682 0.0 1095
MsG0280006520.01.T01 AT4G37910 74.858 704 122 4 3 680 2 676 0.0 1022
MsG0280006520.01.T01 AT4G37910 74.858 704 122 4 3 680 2 676 0.0 1022
MsG0280006520.01.T01 AT4G24280 52.063 630 247 4 50 654 74 673 0.0 625
MsG0280006520.01.T01 AT5G49910 50.683 659 252 6 56 671 80 708 0.0 625
MsG0280006520.01.T01 AT5G02500 47.125 626 256 12 57 640 10 602 0.0 530
MsG0280006520.01.T01 AT1G56410 46.345 643 268 11 57 657 10 617 3.92e-180 526
MsG0280006520.01.T01 AT5G02490 46.805 626 258 11 57 640 10 602 1.52e-179 526
MsG0280006520.01.T01 AT3G12580 45.372 659 279 12 57 671 10 631 2.84e-178 523
MsG0280006520.01.T01 AT3G09440 47.195 606 244 10 57 621 10 580 2.80e-176 518
MsG0280006520.01.T01 AT3G09440 47.195 606 244 10 57 621 10 580 2.80e-176 518
MsG0280006520.01.T01 AT3G09440 47.195 606 244 10 57 621 10 580 2.80e-176 518
MsG0280006520.01.T01 AT3G09440 47.195 606 244 10 57 621 10 580 2.80e-176 518
MsG0280006520.01.T01 AT5G42020 45.107 654 280 13 56 666 37 654 5.73e-176 518
MsG0280006520.01.T01 AT5G42020 45.107 654 280 13 56 666 42 659 7.57e-176 517
MsG0280006520.01.T01 AT5G28540 45.827 635 267 13 56 650 37 634 2.13e-174 513
MsG0280006520.01.T01 AT1G16030 43.323 674 293 13 57 677 9 646 3.76e-170 502
MsG0280006520.01.T01 AT1G09080 46.812 596 246 10 56 616 52 611 2.43e-162 483
MsG0280006520.01.T01 AT1G09080 46.812 596 246 10 56 616 42 601 2.44e-162 483
MsG0280006520.01.T01 AT5G42020 49.027 514 189 11 56 532 37 514 1.61e-151 453
MsG0280006520.01.T01 AT5G02500 47.570 391 168 7 57 415 10 395 9.38e-111 344
MsG0280006520.01.T01 AT1G79920 32.029 409 239 5 56 430 3 406 1.23e-61 219
MsG0280006520.01.T01 AT1G79920 32.029 409 239 5 56 430 3 406 1.23e-61 219
MsG0280006520.01.T01 AT1G79920 32.029 409 239 5 56 430 3 406 1.23e-61 219
MsG0280006520.01.T01 AT1G79920 32.029 409 239 5 56 430 3 406 1.37e-61 219
MsG0280006520.01.T01 AT1G79930 31.785 409 240 5 56 430 3 406 7.42e-61 218
MsG0280006520.01.T01 AT1G79930 31.785 409 240 5 56 430 3 406 1.48e-60 218
MsG0280006520.01.T01 AT1G11660 25.867 692 385 15 56 657 3 656 5.23e-57 207
MsG0280006520.01.T01 AT1G11660 25.867 692 385 15 56 657 3 656 5.23e-57 207
MsG0280006520.01.T01 AT1G11660 25.867 692 385 15 56 657 3 656 5.23e-57 207
MsG0280006520.01.T01 AT2G32120 29.174 545 282 16 48 540 21 513 3.04e-52 190
MsG0280006520.01.T01 AT2G32120 29.174 545 282 16 48 540 21 513 3.04e-52 190
MsG0280006520.01.T01 AT1G11660 25.571 657 361 15 91 657 1 619 2.37e-49 184
MsG0280006520.01.T01 AT4G32208 69.444 108 31 1 578 683 46 153 7.02e-37 135
MsG0280006520.01.T01 AT4G16660 26.549 452 270 11 51 445 45 491 1.71e-35 144
MsG0280006520.01.T01 AT4G16660 26.549 452 270 11 51 445 21 467 1.97e-35 144
MsG0280006520.01.T01 AT5G09600 51.471 68 29 1 3 66 2 69 2.02e-15 76.3
MsG0280006520.01.T01 AT5G09600 51.471 68 29 1 3 66 2 69 2.02e-15 76.3
MsG0280006520.01.T01 AT4G32210 51.471 68 29 1 3 66 2 69 2.02e-15 76.3

Find 205 sgRNAs with CRISPR-Local

Find 302 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGATCAGACTCTTTCTTTCT+TGG 0.190361 2:-3043788 None:intergenic
TTCTGCAGTTTCCTTCATTT+TGG 0.221735 2:-3041747 None:intergenic
ATTAACTAGAGCCTCAAATT+TGG 0.226202 2:-3042368 None:intergenic
GCTGGCTGATCCTGTTTCTT+TGG 0.234971 2:+3039914 MsG0280006520.01.T01:five_prime_UTR
TCAGAATTCTCGATGACTTT+TGG 0.243473 2:-3041455 None:intergenic
GGATGTTACACCACTCTCTT+TGG 0.249560 2:+3042636 MsG0280006520.01.T01:CDS
GAAACCACCTCCTGGACTTT+TGG 0.260284 2:-3042499 None:intergenic
GTCTCTAAGTTGCTAATCTT+TGG 0.261073 2:+3042772 MsG0280006520.01.T01:CDS
GATGTTATTGGTATTGATTT+AGG 0.271435 2:+3041297 MsG0280006520.01.T01:CDS
TGTCGTATCGTGTCATTATA+TGG 0.304691 2:-3039861 None:intergenic
TAATTCATGTGTTTCTGTTA+TGG 0.305065 2:+3041326 MsG0280006520.01.T01:CDS
CTCTTTGGGTATTGAGACTT+TGG 0.311216 2:+3042651 MsG0280006520.01.T01:CDS
TCAACAGTTCTTTAAATAAC+AGG 0.314850 2:+3044142 MsG0280006520.01.T01:three_prime_UTR
GAGCATGCAACTCGGCTTCT+TGG 0.317503 2:-3043758 None:intergenic
TTTAGTTTAGTAGAAATATA+AGG 0.319125 2:+3044184 MsG0280006520.01.T01:intron
CAAGTTTGTCTCGACCATTC+AGG 0.327999 2:+3041177 MsG0280006520.01.T01:CDS
AAAGATGCTGGTAGAATTGC+AGG 0.328628 2:+3041848 MsG0280006520.01.T01:CDS
ACTGCTGCTGCACTTTCATA+TGG 0.336051 2:+3041902 MsG0280006520.01.T01:CDS
AACAAACGGTGACACTTTCT+TGG 0.336793 2:+3042120 MsG0280006520.01.T01:CDS
CTTCTTCTTGCCAAAGAAAC+AGG 0.337191 2:-3039924 None:intergenic
CTATATATGAGGGTTTAGTT+AGG 0.342365 2:-3039983 None:intergenic
TTCCTTCTCCGCCTATCGTT+CGG 0.349225 2:+3040152 MsG0280006520.01.T01:CDS
CTTGGAGAATTTGAGCTTGT+TGG 0.355478 2:+3043570 MsG0280006520.01.T01:CDS
AATGTGCAAAATAAAATAAA+TGG 0.358161 2:-3044326 None:intergenic
TATATGGATCTTTCATCAAT+TGG 0.361445 2:-3039845 None:intergenic
ACCTCTTCATATTCTGCCTC+TGG 0.365485 2:-3044074 None:intergenic
CCTGCTGGAAATGATGTTAT+TGG 0.368167 2:+3041285 MsG0280006520.01.T01:CDS
GCACCAGAGATAGTGTTTAC+TGG 0.372090 2:-3041569 None:intergenic
TATCCTCCAATTGTGATGAT+TGG 0.377696 2:+3044300 MsG0280006520.01.T01:three_prime_UTR
GGAGCCTTAACTATCTTGTA+TGG 0.386249 2:-3041653 None:intergenic
TTCATCACTGCTGATGCATC+TGG 0.388351 2:+3042313 MsG0280006520.01.T01:CDS
CCCATTGCAACTGCCTCGTC+AGG 0.392371 2:-3042559 None:intergenic
GATGTTACACCACTCTCTTT+GGG 0.394078 2:+3042637 MsG0280006520.01.T01:CDS
TTTGCCAGTGGACTTGTCCT+TGG 0.394178 2:-3043673 None:intergenic
CCCTCATCTGGTGGTTCTCA+AGG 0.394266 2:+3044038 MsG0280006520.01.T01:CDS
TGCAATGGGAGCAGCACTCC+AGG 0.396933 2:+3042573 MsG0280006520.01.T01:CDS
CATATTCTGCCTCTGGAGCC+TGG 0.397768 2:-3044067 None:intergenic
ATTGACGAAGTTCTTCTTGT+TGG 0.398755 2:+3042460 MsG0280006520.01.T01:CDS
TGACATGTGCTCTCCAATCT+TGG 0.405711 2:-3043997 None:intergenic
TCAACCCATGCATCTCCATT+TGG 0.408724 2:-3041674 None:intergenic
TCTAGTAGTGGTCCCTCATC+TGG 0.410197 2:+3044026 MsG0280006520.01.T01:CDS
GATGCATGGGTTGAAGCTAA+TGG 0.412898 2:+3041683 MsG0280006520.01.T01:CDS
CAAATTACTATTAAGTCATC+TGG 0.413673 2:+3043702 MsG0280006520.01.T01:CDS
CAGAAAGGGGAGCTGCTTGT+AGG 0.414196 2:+3041515 MsG0280006520.01.T01:CDS
AACAAGGCCGTCTCCAAGAT+TGG 0.416194 2:+3043984 MsG0280006520.01.T01:CDS
TTTGCACATTAACAAATGAA+TGG 0.416767 2:+3044339 MsG0280006520.01.T01:three_prime_UTR
TGGTTCTCAAGGTGGGGACC+AGG 0.421379 2:+3044049 MsG0280006520.01.T01:CDS
TATATATGAGGGTTTAGTTA+GGG 0.427224 2:-3039982 None:intergenic
GGACTTCGACAATGCCTTGT+TGG 0.429600 2:+3042150 MsG0280006520.01.T01:CDS
CATCTGGTGGTTCTCAAGGT+GGG 0.431284 2:+3044042 MsG0280006520.01.T01:CDS
TCTTTGGGTATTGAGACTTT+GGG 0.432640 2:+3042652 MsG0280006520.01.T01:CDS
GAAACTGCAGAAGCTTATCT+TGG 0.436148 2:+3041758 MsG0280006520.01.T01:CDS
TGATAGAAAGAGAGAGAGAA+GGG 0.437584 2:-3040010 None:intergenic
AGAAAAGCCTAAGTGAATAC+AGG 0.439138 2:+3043850 MsG0280006520.01.T01:CDS
TGGTTGCCTTCTCTCAGAAA+GGG 0.442402 2:+3041501 MsG0280006520.01.T01:CDS
CACCAGAGATAGTGTTTACT+GGG 0.445183 2:-3041568 None:intergenic
CTTGATTGGTAGGCGATTTG+AGG 0.446705 2:+3041598 MsG0280006520.01.T01:CDS
CTTTGGGTGGTATCTTTACA+AGG 0.447010 2:+3042668 MsG0280006520.01.T01:CDS
TGATGATGATATTCAAAAGA+TGG 0.452234 2:+3043734 MsG0280006520.01.T01:CDS
TCTGGTGCCAAGCGCTTGAT+TGG 0.452993 2:+3041584 MsG0280006520.01.T01:CDS
ATGCATGGGTTGAAGCTAAT+GGG 0.454653 2:+3041684 MsG0280006520.01.T01:CDS
TGGTAACCAATCATCACAAT+TGG 0.457036 2:-3044306 None:intergenic
AACAATCAGCAGTGGATTGA+AGG 0.457395 2:-3042738 None:intergenic
GTTACAAGGTGAGCGGGAAA+TGG 0.461798 2:+3043530 MsG0280006520.01.T01:CDS
TAACTTGATCGAACGAACTA+AGG 0.462881 2:+3042390 MsG0280006520.01.T01:CDS
AGAAGCGCACTAGAATAATC+TGG 0.463431 2:+3039942 MsG0280006520.01.T01:five_prime_UTR
TTTGGCAAGTCTCCTTGTAA+AGG 0.465703 2:+3042529 MsG0280006520.01.T01:CDS
TGTCAAAGAGCTCCTACTCT+TGG 0.466602 2:+3042615 MsG0280006520.01.T01:CDS
CTCAATCTGAGGCATACCTC+TGG 0.468854 2:-3043607 None:intergenic
TGAGCATCATTGAAATAAGC+TGG 0.470119 2:-3041812 None:intergenic
AAATTGACGAAACCACCTCC+TGG 0.475624 2:-3042507 None:intergenic
AACCCAGTAAACACTATCTC+TGG 0.477225 2:+3041566 MsG0280006520.01.T01:CDS
CTGCACATGTAGGTCACAAT+TGG 0.478779 2:+3041153 MsG0280006520.01.T01:CDS
TGTTACAAATGTTACCTGAA+TGG 0.478863 2:-3041191 None:intergenic
ATCTGGTGGTTCTCAAGGTG+GGG 0.483027 2:+3044043 MsG0280006520.01.T01:CDS
CAAAAGAAGATTCTAGATCA+TGG 0.484679 2:-3039892 None:intergenic
GACTCGTGTGCCAAAAGTCC+AGG 0.485324 2:+3042489 MsG0280006520.01.T01:CDS
ATTTCCTTAGCCACTTCGGC+AGG 0.485366 2:-3043882 None:intergenic
GACGAAGTTCTTCTTGTTGG+AGG 0.486215 2:+3042463 MsG0280006520.01.T01:CDS
TCCTGACGAGGCAGTTGCAA+TGG 0.487005 2:+3042558 MsG0280006520.01.T01:CDS
AGGCACACCAGCCAAGCGTC+AGG 0.487979 2:+3041535 MsG0280006520.01.T01:CDS
GTTACAGCCTGACGCTTGGC+TGG 0.490075 2:-3041542 None:intergenic
CTCGATTTCCTTAGCCACTT+CGG 0.491099 2:-3043886 None:intergenic
AAGATAGTTAAGGCTCCAAA+TGG 0.493974 2:+3041659 MsG0280006520.01.T01:CDS
ATTAACTAGATCCAAATTTG+AGG 0.495332 2:+3042357 MsG0280006520.01.T01:CDS
GACTCCTAGTGGTTTCTAGC+TGG 0.495520 2:+3044107 MsG0280006520.01.T01:three_prime_UTR
GTGATAGAAAGAGAGAGAGA+AGG 0.499015 2:-3040011 None:intergenic
AGAGCGGAGCAAGGCAGTAG+CGG 0.499313 2:-3040103 None:intergenic
AAGAACTTCGTCAATGTCCT+TGG 0.502218 2:-3042452 None:intergenic
CTGCTGCTGCACTTTCATAT+GGG 0.503676 2:+3041903 MsG0280006520.01.T01:CDS
TCATCTGGTGGTTCTCAAGG+TGG 0.506147 2:+3044041 MsG0280006520.01.T01:CDS
GTGGTTGCCTTCTCTCAGAA+AGG 0.507218 2:+3041500 MsG0280006520.01.T01:CDS
TCTTCTCCCTGTATTCACTT+AGG 0.507892 2:-3043857 None:intergenic
ACAAACGGTGACACTTTCTT+GGG 0.511382 2:+3042121 MsG0280006520.01.T01:CDS
CAGAGGTATGCCTCAGATTG+AGG 0.511942 2:+3043608 MsG0280006520.01.T01:CDS
AAGATTGGAGAGCACATGTC+AGG 0.512685 2:+3043999 MsG0280006520.01.T01:CDS
TTGGGTATTGAGACTTTGGG+TGG 0.516399 2:+3042655 MsG0280006520.01.T01:CDS
GGTTCCATACAAGATAGTTA+AGG 0.518279 2:+3041649 MsG0280006520.01.T01:CDS
TCATGTGTTTCTGTTATGGA+AGG 0.518374 2:+3041330 MsG0280006520.01.T01:CDS
TCCATGTCAGAGCTGTTTGA+AGG 0.522642 2:+3042414 MsG0280006520.01.T01:CDS
TACCTCTGGGAGCAGGAGGA+AGG 0.523025 2:-3043593 None:intergenic
CCTGACGAGGCAGTTGCAAT+GGG 0.524301 2:+3042559 MsG0280006520.01.T01:CDS
GTGCCAAGCGCTTGATTGGT+AGG 0.526086 2:+3041588 MsG0280006520.01.T01:CDS
GATACCTGCCGAAGTGGCTA+AGG 0.526914 2:+3043878 MsG0280006520.01.T01:CDS
GCTTCCGACAACAAAATGCT+TGG 0.527578 2:+3043552 MsG0280006520.01.T01:CDS
GTTAGTTACAGCCTGACGCT+TGG 0.527720 2:-3041546 None:intergenic
ACGAAGTTCTTCTTGTTGGA+GGG 0.529005 2:+3042464 MsG0280006520.01.T01:CDS
GGCTCCAAATGGAGATGCAT+GGG 0.531898 2:+3041670 MsG0280006520.01.T01:CDS
TACCGAACGATAGGCGGAGA+AGG 0.532205 2:-3040154 None:intergenic
TGAGGCATACCTCTGGGAGC+AGG 0.532207 2:-3043600 None:intergenic
TCTGCCAAGGACAAGTCCAC+TGG 0.532923 2:+3043669 MsG0280006520.01.T01:CDS
CAGTATTCACCTAGTCAGAT+TGG 0.534024 2:+3041710 MsG0280006520.01.T01:CDS
CAAAGTGTTACAAGGTGAGC+GGG 0.534641 2:+3043524 MsG0280006520.01.T01:CDS
CGTCACGGCGTCGGAGAGAG+CGG 0.537213 2:-3040119 None:intergenic
TTCTGGTGAATGAGTTCAAG+AGG 0.539567 2:+3042176 MsG0280006520.01.T01:CDS
CAGCTCCCCTTTCTGAGAGA+AGG 0.539797 2:-3041507 None:intergenic
TGAGAGAAGGCAACCACAGA+TGG 0.539928 2:-3041494 None:intergenic
CTTCGTTCTCACCAAAATGA+AGG 0.540528 2:+3041736 MsG0280006520.01.T01:CDS
TCCTTCAAACAGCTCTGACA+TGG 0.540643 2:-3042415 None:intergenic
TCAGGATTTACTCCTTTACA+AGG 0.541474 2:-3042541 None:intergenic
TTGTAGGAATAGTAGTGTTG+CGG 0.541766 2:-3042699 None:intergenic
TTTCAATGATGCTCAAAGGC+AGG 0.541897 2:+3041820 MsG0280006520.01.T01:CDS
GAAACTTGATGCTGCAAACA+AGG 0.543023 2:+3043968 MsG0280006520.01.T01:CDS
GCGGAGCAAGGCAGTAGCGG+CGG 0.543480 2:-3040100 None:intergenic
AGCTTCACGAAGCCTTTGCA+AGG 0.544891 2:-3042233 None:intergenic
AATTTGCTGCTCTTTGCCAG+TGG 0.545585 2:-3043685 None:intergenic
AGGATAAGCTTGCCTTGCAA+AGG 0.547010 2:+3042221 MsG0280006520.01.T01:CDS
ATTTGAGAAGTGCGATGGAT+GGG 0.547476 2:+3043922 MsG0280006520.01.T01:CDS
TCGCCTACCAATCAAGCGCT+TGG 0.551371 2:-3041591 None:intergenic
GATTCTAGATCATGGCAAAA+CGG 0.551590 2:-3039884 None:intergenic
GTCTTTCTGAGCATGCAACT+CGG 0.554207 2:-3043766 None:intergenic
GCGTCGGAGAGAGCGGAGCA+AGG 0.557757 2:-3040112 None:intergenic
AGGCAAGCTTATCCTTTGAA+AGG 0.559186 2:-3042213 None:intergenic
TAACCAATCATCACAATTGG+AGG 0.559190 2:-3044303 None:intergenic
AGGTGGGGACCAGGCTCCAG+AGG 0.561460 2:+3044058 MsG0280006520.01.T01:CDS
ACCTTGAGAACCACCAGATG+AGG 0.562067 2:-3044039 None:intergenic
GATTTGAGAAGTGCGATGGA+TGG 0.562641 2:+3043921 MsG0280006520.01.T01:CDS
AAGAAGCAACGTCACGGCGT+CGG 0.562747 2:-3040128 None:intergenic
GATGCATCAGCAGTGATGAA+AGG 0.563187 2:-3042310 None:intergenic
ATGTCAGGTGGCTCTAGTAG+TGG 0.564590 2:+3044014 MsG0280006520.01.T01:CDS
TTCAAGGTGAAAGCAACAAA+CGG 0.565535 2:+3042106 MsG0280006520.01.T01:intron
TGTTTCTGTTATGGAAGGAA+AGG 0.568885 2:+3041335 MsG0280006520.01.T01:CDS
AGGCAGGCAACAAAAGATGC+TGG 0.572362 2:+3041836 MsG0280006520.01.T01:CDS
ACCTTTGACATTGATGCCAA+CGG 0.572611 2:+3043633 MsG0280006520.01.T01:CDS
AGATGTTACCGAACGATAGG+CGG 0.574124 2:-3040160 None:intergenic
TGAGAGTATTGACCTTTCAA+AGG 0.575285 2:+3042201 MsG0280006520.01.T01:CDS
AGGCTCCAAATGGAGATGCA+TGG 0.577676 2:+3041669 MsG0280006520.01.T01:CDS
CCAATAACATCATTTCCAGC+AGG 0.577923 2:-3041285 None:intergenic
ATATGAAAGTGCAGCAGCAG+TGG 0.582158 2:-3041900 None:intergenic
AAGAGATGTTACCGAACGAT+AGG 0.583070 2:-3040163 None:intergenic
ACCGTTGGCATCAATGTCAA+AGG 0.584830 2:-3043634 None:intergenic
TCAAAGTGTTACAAGGTGAG+CGG 0.588467 2:+3043523 MsG0280006520.01.T01:CDS
GTGGTGTAACATCCAAGAGT+AGG 0.589218 2:-3042627 None:intergenic
ATTACTATTAAGTCATCTGG+TGG 0.593329 2:+3043705 MsG0280006520.01.T01:CDS
AGTAGTGGTCCCTCATCTGG+TGG 0.593581 2:+3044029 MsG0280006520.01.T01:CDS
CTTATTTCAATGATGCTCAA+AGG 0.594949 2:+3041816 MsG0280006520.01.T01:CDS
TCAATCTGAGGCATACCTCT+GGG 0.595029 2:-3043606 None:intergenic
GCTGACAATCAAACACAAGT+AGG 0.598347 2:+3043498 MsG0280006520.01.T01:CDS
GGTTGCCTTCTCTCAGAAAG+GGG 0.599666 2:+3041502 MsG0280006520.01.T01:CDS
TTTGAGAAGTGCGATGGATG+GGG 0.599804 2:+3043923 MsG0280006520.01.T01:CDS
TTCTGATTTGAGAAGTGCGA+TGG 0.600338 2:+3043917 MsG0280006520.01.T01:CDS
TATGAAAGTGCAGCAGCAGT+GGG 0.600491 2:-3041899 None:intergenic
TTACTATTAAGTCATCTGGT+GGG 0.600855 2:+3043706 MsG0280006520.01.T01:CDS
TGACACTTTCTTGGGAGGAG+AGG 0.601649 2:+3042129 MsG0280006520.01.T01:CDS
GGACTTGTCCTTGGCAGACA+CGG 0.604046 2:-3043664 None:intergenic
CAATTGTGACCTACATGTGC+AGG 0.606157 2:-3041152 None:intergenic
AACGGTGACACTTTCTTGGG+AGG 0.609522 2:+3042124 MsG0280006520.01.T01:CDS
TATTGTTACCGTGTCTGCCA+AGG 0.609868 2:+3043656 MsG0280006520.01.T01:CDS
GAAAAGCCTAAGTGAATACA+GGG 0.610643 2:+3043851 MsG0280006520.01.T01:CDS
GGCATACCTCTGGGAGCAGG+AGG 0.611402 2:-3043597 None:intergenic
CCTTGAGAACCACCAGATGA+GGG 0.613822 2:-3044038 None:intergenic
CAATTGGAGGATAAACCACT+AGG 0.618412 2:-3044290 None:intergenic
GCAATGGGAGCAGCACTCCA+GGG 0.620916 2:+3042574 MsG0280006520.01.T01:CDS
GCGTCCAGCTAGAAACCACT+AGG 0.621801 2:-3044111 None:intergenic
TGGTAGAATTGCAGGTCTTG+AGG 0.622522 2:+3041856 MsG0280006520.01.T01:CDS
GGCCTTCCTCCTGCTCCCAG+AGG 0.622811 2:+3043591 MsG0280006520.01.T01:CDS
AAAGTCATCGAGAATTCTGA+AGG 0.626296 2:+3041458 MsG0280006520.01.T01:CDS
GTCTCAATACCCAAAGAGAG+TGG 0.627222 2:-3042646 None:intergenic
TGTGCCAAAAGTCCAGGAGG+TGG 0.629804 2:+3042495 MsG0280006520.01.T01:CDS
GGAGAAGATACCTGCCGAAG+TGG 0.630286 2:+3043872 MsG0280006520.01.T01:CDS
ACGAAGGCACCAATCTGACT+AGG 0.630672 2:-3041719 None:intergenic
TGCACGAACTACACCATCTG+TGG 0.631245 2:+3041481 MsG0280006520.01.T01:CDS
AGACACGGTAACAATACCGT+TGG 0.636553 2:-3043649 None:intergenic
TCCAGAGGCAGAATATGAAG+AGG 0.637119 2:+3044073 MsG0280006520.01.T01:CDS
TGTTATATAACAATCAGCAG+TGG 0.638189 2:-3042746 None:intergenic
GGATGCAAATATTTCTACCA+AGG 0.638342 2:+3042435 MsG0280006520.01.T01:CDS
GTAGGAATCAAAGTGTTACA+AGG 0.639471 2:+3043516 MsG0280006520.01.T01:CDS
ATTGGAGAGCACATGTCAGG+TGG 0.645198 2:+3044002 MsG0280006520.01.T01:CDS
TTCATATGGGATGACAAACA+AGG 0.648584 2:+3041916 MsG0280006520.01.T01:CDS
GTGCTCTCCAATCTTGGAGA+CGG 0.649417 2:-3043991 None:intergenic
CGAAGTGGCTAAGGAAATCG+AGG 0.649728 2:+3043887 MsG0280006520.01.T01:CDS
ATATTGAAATCTGTGCCTAG+TGG 0.650410 2:+3044275 MsG0280006520.01.T01:three_prime_UTR
TATGGGATGACAAACAAGGA+AGG 0.655329 2:+3041920 MsG0280006520.01.T01:CDS
TCAAAGGTGACCTCAATCTG+AGG 0.661059 2:-3043618 None:intergenic
AGGAAGAAGAAGCAACGTCA+CGG 0.662284 2:-3040134 None:intergenic
AACACTAAGCCTGCACATGT+AGG 0.670184 2:+3041143 MsG0280006520.01.T01:CDS
GCGGCCATAGCGAGAAAACG+AGG 0.677813 2:-3040081 None:intergenic
CTCCAGGGTGGTATCCTACG+TGG 0.686633 2:+3042589 MsG0280006520.01.T01:CDS
TAAAGGAGTAAATCCTGACG+AGG 0.713039 2:+3042546 MsG0280006520.01.T01:CDS
TCGTGTGCCAAAAGTCCAGG+AGG 0.724781 2:+3042492 MsG0280006520.01.T01:CDS
TGAAGAAGTGAGACTCCTAG+TGG 0.725677 2:+3044096 MsG0280006520.01.T01:exon
GCTCTTTGACATCTCCACGT+AGG 0.729469 2:-3042603 None:intergenic
CTCCACGTAGGATACCACCC+TGG 0.737006 2:-3042591 None:intergenic
ATGGGAGCAGCACTCCAGGG+TGG 0.741120 2:+3042577 MsG0280006520.01.T01:CDS
ATTCACCAGAAAATCCAACA+AGG 0.754480 2:-3042164 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAAAGCTAAAA+CGG - Chr2:3040238-3040257 None:intergenic 10.0%
!!! TTTTATTTTTGTTAATTGAA+GGG + Chr2:3040760-3040779 MsG0280006520.01.T01:intron 10.0%
!! AAAAGATCTATTCTATAAAA+TGG - Chr2:3040382-3040401 None:intergenic 15.0%
!! AATGTGCAAAATAAAATAAA+TGG - Chr2:3044329-3044348 None:intergenic 15.0%
!! AATTATTATTTGACAATCAT+CGG - Chr2:3043267-3043286 None:intergenic 15.0%
!! ACATTTATGTTTATTAGAAA+CGG + Chr2:3043181-3043200 MsG0280006520.01.T01:intron 15.0%
!!! AAACATTTTAGGATAATTAT+TGG - Chr2:3040642-3040661 None:intergenic 15.0%
!!! CTTTTATTTTTGTTAATTGA+AGG + Chr2:3040759-3040778 MsG0280006520.01.T01:intron 15.0%
!!! TTTAGTTTAGTAGAAATATA+AGG + Chr2:3044184-3044203 MsG0280006520.01.T01:intron 15.0%
!!! TTTTGATAAATATAAATGTG+TGG - Chr2:3042837-3042856 None:intergenic 15.0%
!! AAAGACTGAATACAATTAAT+GGG - Chr2:3043092-3043111 None:intergenic 20.0%
!! TAAAGACTGAATACAATTAA+TGG - Chr2:3043093-3043112 None:intergenic 20.0%
!!! AACTTTGTTTTTCTCATTTA+CGG + Chr2:3040980-3040999 MsG0280006520.01.T01:intron 20.0%
!!! ACCATTAGAAATTTCTAAAA+TGG - Chr2:3041989-3042008 None:intergenic 20.0%
!!! AGCATAGTATTATTTTATGA+AGG + Chr2:3041080-3041099 MsG0280006520.01.T01:intron 20.0%
!!! AGTGTTTTTATAAGCTATAT+TGG + Chr2:3040587-3040606 MsG0280006520.01.T01:intron 20.0%
!!! CTAATAACATTTTCATTTCA+AGG + Chr2:3042090-3042109 MsG0280006520.01.T01:intron 20.0%
!!! TCCATTTTAGAAATTTCTAA+TGG + Chr2:3041985-3042004 MsG0280006520.01.T01:intron 20.0%
!!! TTATCCTAAAATGTTTTCAT+AGG + Chr2:3040646-3040665 MsG0280006520.01.T01:intron 20.0%
!!! TTATTTTTGTATCTAATGCT+GGG + Chr2:3044211-3044230 MsG0280006520.01.T01:three_prime_UTR 20.0%
!!! TTCAGTTTTTACAAAGTAAT+TGG + Chr2:3043317-3043336 MsG0280006520.01.T01:intron 20.0%
! AACTCAAAAAGAGATGAAAA+TGG + Chr2:3041628-3041647 MsG0280006520.01.T01:CDS 25.0%
! AAGTAATTGGACATTCAAAA+TGG + Chr2:3043115-3043134 MsG0280006520.01.T01:intron 25.0%
! AATACAATTAATGGGAAACT+CGG - Chr2:3043084-3043103 None:intergenic 25.0%
! AATCCAATCAATGGAAATAT+TGG - Chr2:3041404-3041423 None:intergenic 25.0%
! AGATCTATTCTATAAAATGG+AGG - Chr2:3040379-3040398 None:intergenic 25.0%
! ATTAACTAGATCCAAATTTG+AGG + Chr2:3042357-3042376 MsG0280006520.01.T01:CDS 25.0%
! CAAATTACTATTAAGTCATC+TGG + Chr2:3043702-3043721 MsG0280006520.01.T01:CDS 25.0%
! CTATAATACACATACATTTG+AGG + Chr2:3043375-3043394 MsG0280006520.01.T01:intron 25.0%
! GAAAAACAAAGTTGTAGATT+AGG - Chr2:3040973-3040992 None:intergenic 25.0%
! TATATATGAGGGTTTAGTTA+GGG - Chr2:3039985-3040004 None:intergenic 25.0%
! TCAACAGTTCTTTAAATAAC+AGG + Chr2:3044142-3044161 MsG0280006520.01.T01:three_prime_UTR 25.0%
! TTCAGTCTTTACAAAGTAAT+TGG + Chr2:3043102-3043121 MsG0280006520.01.T01:intron 25.0%
! TTCTAACAAACATAAACGTA+TGG - Chr2:3042970-3042989 None:intergenic 25.0%
!! AGAACCTATGAAAACATTTT+AGG - Chr2:3040653-3040672 None:intergenic 25.0%
!! TAATTCATGTGTTTCTGTTA+TGG + Chr2:3041326-3041345 MsG0280006520.01.T01:CDS 25.0%
!! TGATGATGATATTCAAAAGA+TGG + Chr2:3043734-3043753 MsG0280006520.01.T01:CDS 25.0%
!!! AATTTCTAATGGTGTTTTTG+AGG + Chr2:3041996-3042015 MsG0280006520.01.T01:intron 25.0%
!!! ATAAGTTTTGTGAGACTATT+CGG - Chr2:3040677-3040696 None:intergenic 25.0%
!!! CTTATTTTTGTATCTAATGC+TGG + Chr2:3044210-3044229 MsG0280006520.01.T01:three_prime_UTR 25.0%
!!! CTTTGTTTTTGTCAATCAAA+GGG + Chr2:3040888-3040907 MsG0280006520.01.T01:intron 25.0%
!!! GATGTTATTGGTATTGATTT+AGG + Chr2:3041297-3041316 MsG0280006520.01.T01:CDS 25.0%
!!! TATTTTTGTATCTAATGCTG+GGG + Chr2:3044212-3044231 MsG0280006520.01.T01:three_prime_UTR 25.0%
!!! TTGCTTTTGTTTTTGTCAAT+CGG + Chr2:3040812-3040831 MsG0280006520.01.T01:intron 25.0%
AAGTCAACAAAATACGTCAA+CGG - Chr2:3043207-3043226 None:intergenic 30.0%
ACAAAGAAAGCTGAAAATCA+AGG - Chr2:3040214-3040233 None:intergenic 30.0%
ACTGAATACACTTCCAAAAA+TGG - Chr2:3043303-3043322 None:intergenic 30.0%
ATTAACTAGAGCCTCAAATT+TGG - Chr2:3042371-3042390 None:intergenic 30.0%
ATTACTATTAAGTCATCTGG+TGG + Chr2:3043705-3043724 MsG0280006520.01.T01:CDS 30.0%
CAAAAGAAGATTCTAGATCA+TGG - Chr2:3039895-3039914 None:intergenic 30.0%
CTATATATGAGGGTTTAGTT+AGG - Chr2:3039986-3040005 None:intergenic 30.0%
CTGAATACACTTCCAAAAAT+GGG - Chr2:3043302-3043321 None:intergenic 30.0%
CTTATTTCAATGATGCTCAA+AGG + Chr2:3041816-3041835 MsG0280006520.01.T01:CDS 30.0%
CTTTGTAATATCATTGTTCC+AGG + Chr2:3043461-3043480 MsG0280006520.01.T01:intron 30.0%
GTTCCAATATTTCCATTGAT+TGG + Chr2:3041398-3041417 MsG0280006520.01.T01:intron 30.0%
TATTAGTTGACAATCATCAG+TGG - Chr2:3043054-3043073 None:intergenic 30.0%
TATTATTTGACAATCATCGG+TGG - Chr2:3043264-3043283 None:intergenic 30.0%
TATTCCTACAAAAAAGAGTC+AGG + Chr2:3042711-3042730 MsG0280006520.01.T01:CDS 30.0%
TGATTACACTTACACATCTA+AGG + Chr2:3043016-3043035 MsG0280006520.01.T01:intron 30.0%
TGTTACAAATGTTACCTGAA+TGG - Chr2:3041194-3041213 None:intergenic 30.0%
TGTTATATAACAATCAGCAG+TGG - Chr2:3042749-3042768 None:intergenic 30.0%
TTACTATTAAGTCATCTGGT+GGG + Chr2:3043706-3043725 MsG0280006520.01.T01:CDS 30.0%
! AGAAGGGTTTTCTATATATG+AGG - Chr2:3039997-3040016 None:intergenic 30.0%
! AGCTTTGTGTATTTATGTCA+TGG + Chr2:3043422-3043441 MsG0280006520.01.T01:intron 30.0%
! GAAGGGTTTTCTATATATGA+GGG - Chr2:3039996-3040015 None:intergenic 30.0%
!! CATGTGTATTGCTTTTGTTT+AGG + Chr2:3040287-3040306 MsG0280006520.01.T01:intron 30.0%
!! TAAGTTTTGTGAGACTATTC+GGG - Chr2:3040676-3040695 None:intergenic 30.0%
!!! ATTACCTGACTCTTTTTTGT+AGG - Chr2:3042718-3042737 None:intergenic 30.0%
!!! GCTTTGTTTTTGTCAATCAA+AGG + Chr2:3040887-3040906 MsG0280006520.01.T01:intron 30.0%
AAAGTCATCGAGAATTCTGA+AGG + Chr2:3041458-3041477 MsG0280006520.01.T01:CDS 35.0%
AAGATAGTTAAGGCTCCAAA+TGG + Chr2:3041659-3041678 MsG0280006520.01.T01:CDS 35.0%
ACAAGATACCTCAAGCAAAA+TGG - Chr2:3043352-3043371 None:intergenic 35.0%
ACTCATTACGCACACATTTA+AGG + Chr2:3042912-3042931 MsG0280006520.01.T01:intron 35.0%
ACTTCCAAAAATGGGAAACT+CGG - Chr2:3043294-3043313 None:intergenic 35.0%
ACTTCTACAGCTTATTTCGT+AGG - Chr2:3040617-3040636 None:intergenic 35.0%
AGAAAAGCCTAAGTGAATAC+AGG + Chr2:3043850-3043869 MsG0280006520.01.T01:CDS 35.0%
ATATTGAAATCTGTGCCTAG+TGG + Chr2:3044275-3044294 MsG0280006520.01.T01:three_prime_UTR 35.0%
ATTCACCAGAAAATCCAACA+AGG - Chr2:3042167-3042186 None:intergenic 35.0%
ATTGACGAAGTTCTTCTTGT+TGG + Chr2:3042460-3042479 MsG0280006520.01.T01:CDS 35.0%
GAAAAGCCTAAGTGAATACA+GGG + Chr2:3043851-3043870 MsG0280006520.01.T01:CDS 35.0%
GATTCTAGATCATGGCAAAA+CGG - Chr2:3039887-3039906 None:intergenic 35.0%
GGTTCCATACAAGATAGTTA+AGG + Chr2:3041649-3041668 MsG0280006520.01.T01:CDS 35.0%
GTCTCTAAGTTGCTAATCTT+TGG + Chr2:3042772-3042791 MsG0280006520.01.T01:CDS 35.0%
TAACCAATCATCACAATTGG+AGG - Chr2:3044306-3044325 None:intergenic 35.0%
TAACTTGATCGAACGAACTA+AGG + Chr2:3042390-3042409 MsG0280006520.01.T01:CDS 35.0%
TATCCTCCAATTGTGATGAT+TGG + Chr2:3044300-3044319 MsG0280006520.01.T01:three_prime_UTR 35.0%
TCAAATAAGCCAATCCAAAC+AGG + Chr2:3040709-3040728 MsG0280006520.01.T01:intron 35.0%
TCAGGATTTACTCCTTTACA+AGG - Chr2:3042544-3042563 None:intergenic 35.0%
TCCTTCAGACAGGTTAAAAA+AGG - Chr2:3042047-3042066 None:intergenic 35.0%
TGAGCATCATTGAAATAAGC+TGG - Chr2:3041815-3041834 None:intergenic 35.0%
TGATAGAAAGAGAGAGAGAA+GGG - Chr2:3040013-3040032 None:intergenic 35.0%
TGGTAACCAATCATCACAAT+TGG - Chr2:3044309-3044328 None:intergenic 35.0%
TTCAAGGTGAAAGCAACAAA+CGG + Chr2:3042106-3042125 MsG0280006520.01.T01:intron 35.0%
TTCATATGGGATGACAAACA+AGG + Chr2:3041916-3041935 MsG0280006520.01.T01:CDS 35.0%
TTCTGTCTTTACGAAGTAAC+TGG + Chr2:3042802-3042821 MsG0280006520.01.T01:intron 35.0%
TTGTAGGAATAGTAGTGTTG+CGG - Chr2:3042702-3042721 None:intergenic 35.0%
! ATTGTTCCAGGTCTTTTCAA+CGG + Chr2:3043473-3043492 MsG0280006520.01.T01:intron 35.0%
! CATTCAAACCATTTTGCTTG+AGG + Chr2:3043341-3043360 MsG0280006520.01.T01:intron 35.0%
! GGATGCAAATATTTCTACCA+AGG + Chr2:3042435-3042454 MsG0280006520.01.T01:CDS 35.0%
! GTAGGAATCAAAGTGTTACA+AGG + Chr2:3043516-3043535 MsG0280006520.01.T01:CDS 35.0%
! TCAGAATTCTCGATGACTTT+TGG - Chr2:3041458-3041477 None:intergenic 35.0%
! TCATGTGTTTCTGTTATGGA+AGG + Chr2:3041330-3041349 MsG0280006520.01.T01:CDS 35.0%
! TCTAATGCTGGGGATTTTAT+TGG + Chr2:3044222-3044241 MsG0280006520.01.T01:three_prime_UTR 35.0%
! TGTCGTATCGTGTCATTATA+TGG - Chr2:3039864-3039883 None:intergenic 35.0%
! TGTTTCTGTTATGGAAGGAA+AGG + Chr2:3041335-3041354 MsG0280006520.01.T01:CDS 35.0%
! TTCTGCAGTTTCCTTCATTT+TGG - Chr2:3041750-3041769 None:intergenic 35.0%
!! GAACTGATTTTGAGCTTGTT+TGG + Chr2:3040466-3040485 MsG0280006520.01.T01:intron 35.0%
!! GATCTAGAATCTTCTTTTGC+TGG + Chr2:3039896-3039915 MsG0280006520.01.T01:five_prime_UTR 35.0%
!! GGGGATTTTATTGGTGTTTT+TGG + Chr2:3044231-3044250 MsG0280006520.01.T01:three_prime_UTR 35.0%
!! TCTTTGGGTATTGAGACTTT+GGG + Chr2:3042652-3042671 MsG0280006520.01.T01:CDS 35.0%
!! TGAGAGTATTGACCTTTCAA+AGG + Chr2:3042201-3042220 MsG0280006520.01.T01:CDS 35.0%
!! TTCTCCAAGCATTTTGTTGT+CGG - Chr2:3043559-3043578 None:intergenic 35.0%
!!! GATGTTGTTTTGCAGTTGAT+AGG + Chr2:3041119-3041138 MsG0280006520.01.T01:intron 35.0%
!!! TCCTTTTTTAACCTGTCTGA+AGG + Chr2:3042043-3042062 MsG0280006520.01.T01:intron 35.0%
AAAGATGCTGGTAGAATTGC+AGG + Chr2:3041848-3041867 MsG0280006520.01.T01:CDS 40.0%
AAATGTGTGCGTAATGAGTG+AGG - Chr2:3042911-3042930 None:intergenic 40.0%
AACAAACGGTGACACTTTCT+TGG + Chr2:3042120-3042139 MsG0280006520.01.T01:CDS 40.0%
AACCCAGTAAACACTATCTC+TGG + Chr2:3041566-3041585 MsG0280006520.01.T01:CDS 40.0%
AAGAACTTCGTCAATGTCCT+TGG - Chr2:3042455-3042474 None:intergenic 40.0%
AAGAGATGTTACCGAACGAT+AGG - Chr2:3040166-3040185 None:intergenic 40.0%
AATGTGTGCGTAATGAGTGA+GGG - Chr2:3042910-3042929 None:intergenic 40.0%
ACAAACGGTGACACTTTCTT+GGG + Chr2:3042121-3042140 MsG0280006520.01.T01:CDS 40.0%
ACCTTTGACATTGATGCCAA+CGG + Chr2:3043633-3043652 MsG0280006520.01.T01:CDS 40.0%
ACGAAGTTCTTCTTGTTGGA+GGG + Chr2:3042464-3042483 MsG0280006520.01.T01:CDS 40.0%
AGGCAAGCTTATCCTTTGAA+AGG - Chr2:3042216-3042235 None:intergenic 40.0%
CAATTGGAGGATAAACCACT+AGG - Chr2:3044293-3044312 None:intergenic 40.0%
CACCAGAGATAGTGTTTACT+GGG - Chr2:3041571-3041590 None:intergenic 40.0%
CAGTATTCACCTAGTCAGAT+TGG + Chr2:3041710-3041729 MsG0280006520.01.T01:CDS 40.0%
CCAATAACATCATTTCCAGC+AGG - Chr2:3041288-3041307 None:intergenic 40.0%
CCTGCTGGAAATGATGTTAT+TGG + Chr2:3041285-3041304 MsG0280006520.01.T01:CDS 40.0%
CGATCAGACTCTTTCTTTCT+TGG - Chr2:3043791-3043810 None:intergenic 40.0%
CTCATACTATTCCTTCAGAC+AGG - Chr2:3042057-3042076 None:intergenic 40.0%
CTTCGTTCTCACCAAAATGA+AGG + Chr2:3041736-3041755 MsG0280006520.01.T01:CDS 40.0%
CTTCTTCTTGCCAAAGAAAC+AGG - Chr2:3039927-3039946 None:intergenic 40.0%
CTTGGAGAATTTGAGCTTGT+TGG + Chr2:3043570-3043589 MsG0280006520.01.T01:CDS 40.0%
CTTTGGGTGGTATCTTTACA+AGG + Chr2:3042668-3042687 MsG0280006520.01.T01:CDS 40.0%
GAAACTGCAGAAGCTTATCT+TGG + Chr2:3041758-3041777 MsG0280006520.01.T01:CDS 40.0%
GAAACTTGATGCTGCAAACA+AGG + Chr2:3043968-3043987 MsG0280006520.01.T01:CDS 40.0%
GATGTTACACCACTCTCTTT+GGG + Chr2:3042637-3042656 MsG0280006520.01.T01:CDS 40.0%
GCTGACAATCAAACACAAGT+AGG + Chr2:3043498-3043517 MsG0280006520.01.T01:CDS 40.0%
GGAGCCTTAACTATCTTGTA+TGG - Chr2:3041656-3041675 None:intergenic 40.0%
GTCAGCACAAATCCAATCAA+TGG - Chr2:3041413-3041432 None:intergenic 40.0%
GTCTGAAGGAATAGTATGAG+AGG + Chr2:3042057-3042076 MsG0280006520.01.T01:intron 40.0%
GTGATAGAAAGAGAGAGAGA+AGG - Chr2:3040014-3040033 None:intergenic 40.0%
TAAAGGAGTAAATCCTGACG+AGG + Chr2:3042546-3042565 MsG0280006520.01.T01:CDS 40.0%
TAAAGTGCACGACAGTGAAA+GGG - Chr2:3040191-3040210 None:intergenic 40.0%
TATGGGATGACAAACAAGGA+AGG + Chr2:3041920-3041939 MsG0280006520.01.T01:CDS 40.0%
TCTTCTCCCTGTATTCACTT+AGG - Chr2:3043860-3043879 None:intergenic 40.0%
TTCTGGTGAATGAGTTCAAG+AGG + Chr2:3042176-3042195 MsG0280006520.01.T01:CDS 40.0%
TTTCAATGATGCTCAAAGGC+AGG + Chr2:3041820-3041839 MsG0280006520.01.T01:CDS 40.0%
TTTGGCAAGTCTCCTTGTAA+AGG + Chr2:3042529-3042548 MsG0280006520.01.T01:CDS 40.0%
! AGAAGCGCACTAGAATAATC+TGG + Chr2:3039942-3039961 MsG0280006520.01.T01:five_prime_UTR 40.0%
! ATGCATGGGTTGAAGCTAAT+GGG + Chr2:3041684-3041703 MsG0280006520.01.T01:CDS 40.0%
! ATTTGAGAAGTGCGATGGAT+GGG + Chr2:3043922-3043941 MsG0280006520.01.T01:CDS 40.0%
! GAGGGTTTAGTTAGGGTTTT+TGG - Chr2:3039978-3039997 None:intergenic 40.0%
! GAGGTGGTTTCGTCAATTTT+TGG + Chr2:3042511-3042530 MsG0280006520.01.T01:CDS 40.0%
! GTTTCCGAGTTTCCCATTTT+TGG + Chr2:3043287-3043306 MsG0280006520.01.T01:intron 40.0%
! TCAAAGTGTTACAAGGTGAG+CGG + Chr2:3043523-3043542 MsG0280006520.01.T01:CDS 40.0%
! TTCTGATTTGAGAAGTGCGA+TGG + Chr2:3043917-3043936 MsG0280006520.01.T01:CDS 40.0%
! TTTTCCTCGTTTTCTCGCTA+TGG + Chr2:3040077-3040096 MsG0280006520.01.T01:exon 40.0%
!! AACAATCAGCAGTGGATTGA+AGG - Chr2:3042741-3042760 None:intergenic 40.0%
!! CAATGCCTTGTTGGATTTTC+TGG + Chr2:3042159-3042178 MsG0280006520.01.T01:CDS 40.0%
!! CTCTTTGGGTATTGAGACTT+TGG + Chr2:3042651-3042670 MsG0280006520.01.T01:CDS 40.0%
!! CTTCATTTTGGTGAGAACGA+AGG - Chr2:3041738-3041757 None:intergenic 40.0%
!!! ATTGCTGTTTTTGACCTTGG+TGG + Chr2:3041947-3041966 MsG0280006520.01.T01:intron 40.0%
!!! CTCATTGCTGTTTTTGACCT+TGG + Chr2:3041944-3041963 MsG0280006520.01.T01:intron 40.0%
!!! CTCTCTTGTTTTGCAGTTCA+AGG + Chr2:3041262-3041281 MsG0280006520.01.T01:intron 40.0%
AAAGTGCACGACAGTGAAAG+GGG - Chr2:3040190-3040209 None:intergenic 45.0%
AAATTGACGAAACCACCTCC+TGG - Chr2:3042510-3042529 None:intergenic 45.0%
AACAACGAGCCTGTTTGGAT+TGG - Chr2:3040721-3040740 None:intergenic 45.0%
AACACTAAGCCTGCACATGT+AGG + Chr2:3041143-3041162 MsG0280006520.01.T01:CDS 45.0%
ACATCAATGTTCCACCACCA+AGG - Chr2:3041964-3041983 None:intergenic 45.0%
ACCGTTGGCATCAATGTCAA+AGG - Chr2:3043637-3043656 None:intergenic 45.0%
ACCTCTTCATATTCTGCCTC+TGG - Chr2:3044077-3044096 None:intergenic 45.0%
ACTGCTGCTGCACTTTCATA+TGG + Chr2:3041902-3041921 MsG0280006520.01.T01:CDS 45.0%
AGACACGGTAACAATACCGT+TGG - Chr2:3043652-3043671 None:intergenic 45.0%
AGATGTTACCGAACGATAGG+CGG - Chr2:3040163-3040182 None:intergenic 45.0%
AGGAAGAAGAAGCAACGTCA+CGG - Chr2:3040137-3040156 None:intergenic 45.0%
AGGATAAGCTTGCCTTGCAA+AGG + Chr2:3042221-3042240 MsG0280006520.01.T01:CDS 45.0%
ATGTGTGCGTAATGAGTGAG+GGG - Chr2:3042909-3042928 None:intergenic 45.0%
CAACAAACAACGAGCCTGTT+TGG - Chr2:3040726-3040745 None:intergenic 45.0%
CAAGTTTGTCTCGACCATTC+AGG + Chr2:3041177-3041196 MsG0280006520.01.T01:CDS 45.0%
CAATTGTGACCTACATGTGC+AGG - Chr2:3041155-3041174 None:intergenic 45.0%
CTCGATTTCCTTAGCCACTT+CGG - Chr2:3043889-3043908 None:intergenic 45.0%
CTGCACATGTAGGTCACAAT+TGG + Chr2:3041153-3041172 MsG0280006520.01.T01:CDS 45.0%
CTGCTGCTGCACTTTCATAT+GGG + Chr2:3041903-3041922 MsG0280006520.01.T01:CDS 45.0%
CTTGATTGGTAGGCGATTTG+AGG + Chr2:3041598-3041617 MsG0280006520.01.T01:CDS 45.0%
GACGAAGTTCTTCTTGTTGG+AGG + Chr2:3042463-3042482 MsG0280006520.01.T01:CDS 45.0%
GATGCATCAGCAGTGATGAA+AGG - Chr2:3042313-3042332 None:intergenic 45.0%
GCACCAGAGATAGTGTTTAC+TGG - Chr2:3041572-3041591 None:intergenic 45.0%
GCTTCCGACAACAAAATGCT+TGG + Chr2:3043552-3043571 MsG0280006520.01.T01:CDS 45.0%
GGATGTTACACCACTCTCTT+TGG + Chr2:3042636-3042655 MsG0280006520.01.T01:CDS 45.0%
GTAAAGTGCACGACAGTGAA+AGG - Chr2:3040192-3040211 None:intergenic 45.0%
GTCTCAATACCCAAAGAGAG+TGG - Chr2:3042649-3042668 None:intergenic 45.0%
GTCTTTCTGAGCATGCAACT+CGG - Chr2:3043769-3043788 None:intergenic 45.0%
GTGGTGTAACATCCAAGAGT+AGG - Chr2:3042630-3042649 None:intergenic 45.0%
TATTGTTACCGTGTCTGCCA+AGG + Chr2:3043656-3043675 MsG0280006520.01.T01:CDS 45.0%
TCAAAGGTGACCTCAATCTG+AGG - Chr2:3043621-3043640 None:intergenic 45.0%
TCAACCCATGCATCTCCATT+TGG - Chr2:3041677-3041696 None:intergenic 45.0%
TCCAGAGGCAGAATATGAAG+AGG + Chr2:3044073-3044092 MsG0280006520.01.T01:CDS 45.0%
TCCATGTCAGAGCTGTTTGA+AGG + Chr2:3042414-3042433 MsG0280006520.01.T01:CDS 45.0%
TGAAGAAGTGAGACTCCTAG+TGG + Chr2:3044096-3044115 MsG0280006520.01.T01:exon 45.0%
TGACATGTGCTCTCCAATCT+TGG - Chr2:3044000-3044019 None:intergenic 45.0%
TGGTAGAATTGCAGGTCTTG+AGG + Chr2:3041856-3041875 MsG0280006520.01.T01:CDS 45.0%
TGGTTGCCTTCTCTCAGAAA+GGG + Chr2:3041501-3041520 MsG0280006520.01.T01:CDS 45.0%
TGTCAAAGAGCTCCTACTCT+TGG + Chr2:3042615-3042634 MsG0280006520.01.T01:CDS 45.0%
TTCATCACTGCTGATGCATC+TGG + Chr2:3042313-3042332 MsG0280006520.01.T01:CDS 45.0%
! AAGATTGGAGAGCACATGTC+AGG + Chr2:3043999-3044018 MsG0280006520.01.T01:CDS 45.0%
! ATATGAAAGTGCAGCAGCAG+TGG - Chr2:3041903-3041922 None:intergenic 45.0%
! CAAAGTGTTACAAGGTGAGC+GGG + Chr2:3043524-3043543 MsG0280006520.01.T01:CDS 45.0%
! GATGCATGGGTTGAAGCTAA+TGG + Chr2:3041683-3041702 MsG0280006520.01.T01:CDS 45.0%
! GATTTGAGAAGTGCGATGGA+TGG + Chr2:3043921-3043940 MsG0280006520.01.T01:CDS 45.0%
! TATGAAAGTGCAGCAGCAGT+GGG - Chr2:3041902-3041921 None:intergenic 45.0%
! TCAATCTGAGGCATACCTCT+GGG - Chr2:3043609-3043628 None:intergenic 45.0%
! TCCTTCAAACAGCTCTGACA+TGG - Chr2:3042418-3042437 None:intergenic 45.0%
! TTTGAGAAGTGCGATGGATG+GGG + Chr2:3043923-3043942 MsG0280006520.01.T01:CDS 45.0%
!! AATTTGCTGCTCTTTGCCAG+TGG - Chr2:3043688-3043707 None:intergenic 45.0%
!! TTGGGTATTGAGACTTTGGG+TGG + Chr2:3042655-3042674 MsG0280006520.01.T01:CDS 45.0%
AACAAGGCCGTCTCCAAGAT+TGG + Chr2:3043984-3044003 MsG0280006520.01.T01:CDS 50.0%
AACGGTGACACTTTCTTGGG+AGG + Chr2:3042124-3042143 MsG0280006520.01.T01:CDS 50.0%
ACCTTGAGAACCACCAGATG+AGG - Chr2:3044042-3044061 None:intergenic 50.0%
AGCTTCACGAAGCCTTTGCA+AGG - Chr2:3042236-3042255 None:intergenic 50.0%
AGGCAGGCAACAAAAGATGC+TGG + Chr2:3041836-3041855 MsG0280006520.01.T01:CDS 50.0%
AGGCTCCAAATGGAGATGCA+TGG + Chr2:3041669-3041688 MsG0280006520.01.T01:CDS 50.0%
ATCTGGTGGTTCTCAAGGTG+GGG + Chr2:3044043-3044062 MsG0280006520.01.T01:CDS 50.0%
ATTTCCTTAGCCACTTCGGC+AGG - Chr2:3043885-3043904 None:intergenic 50.0%
CATCTGGTGGTTCTCAAGGT+GGG + Chr2:3044042-3044061 MsG0280006520.01.T01:CDS 50.0%
CCTTGAGAACCACCAGATGA+GGG - Chr2:3044041-3044060 None:intergenic 50.0%
CGAAGTGGCTAAGGAAATCG+AGG + Chr2:3043887-3043906 MsG0280006520.01.T01:CDS 50.0%
GCTCTTTGACATCTCCACGT+AGG - Chr2:3042606-3042625 None:intergenic 50.0%
GGACTTCGACAATGCCTTGT+TGG + Chr2:3042150-3042169 MsG0280006520.01.T01:CDS 50.0%
GGCTCCAAATGGAGATGCAT+GGG + Chr2:3041670-3041689 MsG0280006520.01.T01:CDS 50.0%
GGTTGCCTTCTCTCAGAAAG+GGG + Chr2:3041502-3041521 MsG0280006520.01.T01:CDS 50.0%
GTGCTCTCCAATCTTGGAGA+CGG - Chr2:3043994-3044013 None:intergenic 50.0%
GTGGTTGCCTTCTCTCAGAA+AGG + Chr2:3041500-3041519 MsG0280006520.01.T01:CDS 50.0%
GTTACAAGGTGAGCGGGAAA+TGG + Chr2:3043530-3043549 MsG0280006520.01.T01:CDS 50.0%
GTTAGTTACAGCCTGACGCT+TGG - Chr2:3041549-3041568 None:intergenic 50.0%
TCATCTGGTGGTTCTCAAGG+TGG + Chr2:3044041-3044060 MsG0280006520.01.T01:CDS 50.0%
TCTAGTAGTGGTCCCTCATC+TGG + Chr2:3044026-3044045 MsG0280006520.01.T01:CDS 50.0%
TGACACTTTCTTGGGAGGAG+AGG + Chr2:3042129-3042148 MsG0280006520.01.T01:CDS 50.0%
TGAGAGAAGGCAACCACAGA+TGG - Chr2:3041497-3041516 None:intergenic 50.0%
TGCACGAACTACACCATCTG+TGG + Chr2:3041481-3041500 MsG0280006520.01.T01:CDS 50.0%
TGTGTGCGTAATGAGTGAGG+GGG - Chr2:3042908-3042927 None:intergenic 50.0%
TTCCTTCTCCGCCTATCGTT+CGG + Chr2:3040152-3040171 MsG0280006520.01.T01:CDS 50.0%
! ATTGGAGAGCACATGTCAGG+TGG + Chr2:3044002-3044021 MsG0280006520.01.T01:CDS 50.0%
! CAGAGGTATGCCTCAGATTG+AGG + Chr2:3043608-3043627 MsG0280006520.01.T01:CDS 50.0%
! CTCAATCTGAGGCATACCTC+TGG - Chr2:3043610-3043629 None:intergenic 50.0%
! GAAACCACCTCCTGGACTTT+TGG - Chr2:3042502-3042521 None:intergenic 50.0%
! GCTGGCTGATCCTGTTTCTT+TGG + Chr2:3039914-3039933 MsG0280006520.01.T01:five_prime_UTR 50.0%
! TTTGCCAGTGGACTTGTCCT+TGG - Chr2:3043676-3043695 None:intergenic 50.0%
! TTTTGCAGTTCAAGGCCTGC+TGG + Chr2:3041270-3041289 MsG0280006520.01.T01:intron 50.0%
!! ACGAAGGCACCAATCTGACT+AGG - Chr2:3041722-3041741 None:intergenic 50.0%
!! ATGTCAGGTGGCTCTAGTAG+TGG + Chr2:3044014-3044033 MsG0280006520.01.T01:CDS 50.0%
!! GACTCCTAGTGGTTTCTAGC+TGG + Chr2:3044107-3044126 MsG0280006520.01.T01:three_prime_UTR 50.0%
!!! GCTGTTTTTGACCTTGGTGG+TGG + Chr2:3041950-3041969 MsG0280006520.01.T01:intron 50.0%
AAGAAGCAACGTCACGGCGT+CGG - Chr2:3040131-3040150 None:intergenic 55.0%
AGTAGTGGTCCCTCATCTGG+TGG + Chr2:3044029-3044048 MsG0280006520.01.T01:CDS 55.0%
CAGAAAGGGGAGCTGCTTGT+AGG + Chr2:3041515-3041534 MsG0280006520.01.T01:CDS 55.0%
CAGCTGCCGTTGAAAAGACC+TGG - Chr2:3043482-3043501 None:intergenic 55.0%
CCCTCATCTGGTGGTTCTCA+AGG + Chr2:3044038-3044057 MsG0280006520.01.T01:CDS 55.0%
CCTGACGAGGCAGTTGCAAT+GGG + Chr2:3042559-3042578 MsG0280006520.01.T01:CDS 55.0%
GACTCGTGTGCCAAAAGTCC+AGG + Chr2:3042489-3042508 MsG0280006520.01.T01:CDS 55.0%
GAGCATGCAACTCGGCTTCT+TGG - Chr2:3043761-3043780 None:intergenic 55.0%
GATACCTGCCGAAGTGGCTA+AGG + Chr2:3043878-3043897 MsG0280006520.01.T01:CDS 55.0%
GCGTCCAGCTAGAAACCACT+AGG - Chr2:3044114-3044133 None:intergenic 55.0%
GGACTTGTCCTTGGCAGACA+CGG - Chr2:3043667-3043686 None:intergenic 55.0%
GGAGAAGATACCTGCCGAAG+TGG + Chr2:3043872-3043891 MsG0280006520.01.T01:CDS 55.0%
GTGCCAAGCGCTTGATTGGT+AGG + Chr2:3041588-3041607 MsG0280006520.01.T01:CDS 55.0%
TACCGAACGATAGGCGGAGA+AGG - Chr2:3040157-3040176 None:intergenic 55.0%
TCCTGACGAGGCAGTTGCAA+TGG + Chr2:3042558-3042577 MsG0280006520.01.T01:CDS 55.0%
TCGCCTACCAATCAAGCGCT+TGG - Chr2:3041594-3041613 None:intergenic 55.0%
TCGTGTGCCAAAAGTCCAGG+AGG + Chr2:3042492-3042511 MsG0280006520.01.T01:CDS 55.0%
TCTGCCAAGGACAAGTCCAC+TGG + Chr2:3043669-3043688 MsG0280006520.01.T01:CDS 55.0%
TGTGCCAAAAGTCCAGGAGG+TGG + Chr2:3042495-3042514 MsG0280006520.01.T01:CDS 55.0%
! CAGCTCCCCTTTCTGAGAGA+AGG - Chr2:3041510-3041529 None:intergenic 55.0%
! CGTAATGAGTGAGGGGGTGT+GGG - Chr2:3042902-3042921 None:intergenic 55.0%
! GTAATGAGTGAGGGGGTGTG+GGG - Chr2:3042901-3042920 None:intergenic 55.0%
! TCTGGTGCCAAGCGCTTGAT+TGG + Chr2:3041584-3041603 MsG0280006520.01.T01:CDS 55.0%
!! CATATTCTGCCTCTGGAGCC+TGG - Chr2:3044070-3044089 None:intergenic 55.0%
AGAGCGGAGCAAGGCAGTAG+CGG - Chr2:3040106-3040125 None:intergenic 60.0%
CCCATTGCAACTGCCTCGTC+AGG - Chr2:3042562-3042581 None:intergenic 60.0%
CTCCACGTAGGATACCACCC+TGG - Chr2:3042594-3042613 None:intergenic 60.0%
CTCCAGGGTGGTATCCTACG+TGG + Chr2:3042589-3042608 MsG0280006520.01.T01:CDS 60.0%
GCAATGGGAGCAGCACTCCA+GGG + Chr2:3042574-3042593 MsG0280006520.01.T01:CDS 60.0%
GCGGCCATAGCGAGAAAACG+AGG - Chr2:3040084-3040103 None:intergenic 60.0%
GCGTAATGAGTGAGGGGGTG+TGG - Chr2:3042903-3042922 None:intergenic 60.0%
GTTACAGCCTGACGCTTGGC+TGG - Chr2:3041545-3041564 None:intergenic 60.0%
TGCAATGGGAGCAGCACTCC+AGG + Chr2:3042573-3042592 MsG0280006520.01.T01:CDS 60.0%
TGGTTCTCAAGGTGGGGACC+AGG + Chr2:3044049-3044068 MsG0280006520.01.T01:CDS 60.0%
! TACCTCTGGGAGCAGGAGGA+AGG - Chr2:3043596-3043615 None:intergenic 60.0%
! TGAGGCATACCTCTGGGAGC+AGG - Chr2:3043603-3043622 None:intergenic 60.0%
AGGCACACCAGCCAAGCGTC+AGG + Chr2:3041535-3041554 MsG0280006520.01.T01:CDS 65.0%
ATGGGAGCAGCACTCCAGGG+TGG + Chr2:3042577-3042596 MsG0280006520.01.T01:CDS 65.0%
! GGCATACCTCTGGGAGCAGG+AGG - Chr2:3043600-3043619 None:intergenic 65.0%
AGGTGGGGACCAGGCTCCAG+AGG + Chr2:3044058-3044077 MsG0280006520.01.T01:CDS 70.0%
GCGGAGCAAGGCAGTAGCGG+CGG - Chr2:3040103-3040122 None:intergenic 70.0%
GCGTCGGAGAGAGCGGAGCA+AGG - Chr2:3040115-3040134 None:intergenic 70.0%
GGCCTTCCTCCTGCTCCCAG+AGG + Chr2:3043591-3043610 MsG0280006520.01.T01:CDS 70.0%
! CGTCACGGCGTCGGAGAGAG+CGG - Chr2:3040122-3040141 None:intergenic 70.0%
! GAGGGGGTGTGGGGTGTGGT+GGG - Chr2:3042892-3042911 None:intergenic 70.0%
! GAGTGAGGGGGTGTGGGGTG+TGG - Chr2:3042896-3042915 None:intergenic 70.0%
! TGAGGGGGTGTGGGGTGTGG+TGG - Chr2:3042893-3042912 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr2 gene 3039847 3044359 3039847 ID=MsG0280006520.01;Name=MsG0280006520.01
Chr2 mRNA 3039847 3044359 3039847 ID=MsG0280006520.01.T01;Parent=MsG0280006520.01;Name=MsG0280006520.01.T01;_AED=0.24;_eAED=0.24;_QI=249|0.66|0.71|1|0.83|0.71|7|230|683
Chr2 exon 3039847 3040173 3039847 ID=MsG0280006520.01.T01:exon:582;Parent=MsG0280006520.01.T01
Chr2 exon 3041134 3041198 3041134 ID=MsG0280006520.01.T01:exon:583;Parent=MsG0280006520.01.T01
Chr2 exon 3041278 3041356 3041278 ID=MsG0280006520.01.T01:exon:584;Parent=MsG0280006520.01.T01
Chr2 exon 3041452 3041952 3041452 ID=MsG0280006520.01.T01:exon:585;Parent=MsG0280006520.01.T01
Chr2 exon 3042112 3042816 3042112 ID=MsG0280006520.01.T01:exon:586;Parent=MsG0280006520.01.T01
Chr2 exon 3043483 3044170 3043483 ID=MsG0280006520.01.T01:exon:587;Parent=MsG0280006520.01.T01
Chr2 exon 3044194 3044359 3044194 ID=MsG0280006520.01.T01:exon:588;Parent=MsG0280006520.01.T01
Chr2 five_prime_UTR 3039847 3040095 3039847 ID=MsG0280006520.01.T01:five_prime_utr;Parent=MsG0280006520.01.T01
Chr2 CDS 3040096 3040173 3040096 ID=MsG0280006520.01.T01:cds;Parent=MsG0280006520.01.T01
Chr2 CDS 3041134 3041198 3041134 ID=MsG0280006520.01.T01:cds;Parent=MsG0280006520.01.T01
Chr2 CDS 3041278 3041356 3041278 ID=MsG0280006520.01.T01:cds;Parent=MsG0280006520.01.T01
Chr2 CDS 3041452 3041952 3041452 ID=MsG0280006520.01.T01:cds;Parent=MsG0280006520.01.T01
Chr2 CDS 3042112 3042816 3042112 ID=MsG0280006520.01.T01:cds;Parent=MsG0280006520.01.T01
Chr2 CDS 3043483 3044106 3043483 ID=MsG0280006520.01.T01:cds;Parent=MsG0280006520.01.T01
Chr2 three_prime_UTR 3044107 3044170 3044107 ID=MsG0280006520.01.T01:three_prime_utr;Parent=MsG0280006520.01.T01
Chr2 three_prime_UTR 3044194 3044359 3044194 ID=MsG0280006520.01.T01:three_prime_utr;Parent=MsG0280006520.01.T01
Gene Sequence

>MsG0280006520.01.T01

ATGGCCGCCGCTACTGCCTTGCTCCGCTCTCTCCGACGCCGTGACGTTGCTTCTTCTTCCTTCTCCGCCTATCGTTCGTTGATAGGTAACACTAAGCCTGCACATGTAGGTCACAATTGGTCAAGTTTGTCTCGACCATTCAGTTCAAGGCCTGCTGGAAATGATGTTATTGGTATTGATTTAGGTACAACTAATTCATGTGTTTCTGTTATGGAAGGAAAGAATCCAAAAGTCATCGAGAATTCTGAAGGTGCACGAACTACACCATCTGTGGTTGCCTTCTCTCAGAAAGGGGAGCTGCTTGTAGGCACACCAGCCAAGCGTCAGGCTGTAACTAACCCAGTAAACACTATCTCTGGTGCCAAGCGCTTGATTGGTAGGCGATTTGAGGACGCTCAAACTCAAAAAGAGATGAAAATGGTTCCATACAAGATAGTTAAGGCTCCAAATGGAGATGCATGGGTTGAAGCTAATGGGCAGCAGTATTCACCTAGTCAGATTGGTGCCTTCGTTCTCACCAAAATGAAGGAAACTGCAGAAGCTTATCTTGGAAAGAGCGTTTCTAAAGCTGTTATTACTGTTCCAGCTTATTTCAATGATGCTCAAAGGCAGGCAACAAAAGATGCTGGTAGAATTGCAGGTCTTGAGGTGCTTAGAATCATCAATGAGCCCACTGCTGCTGCACTTTCATATGGGATGACAAACAAGGAAGGTCTCATTGCTGTGAAAGCAACAAACGGTGACACTTTCTTGGGAGGAGAGGACTTCGACAATGCCTTGTTGGATTTTCTGGTGAATGAGTTCAAGAGGTCTGAGAGTATTGACCTTTCAAAGGATAAGCTTGCCTTGCAAAGGCTTCGTGAAGCTGCTGAGAAAGCTAAGATAGAACTGTCTTCAACATCTCAGACAGAAATTAACTTGCCTTTCATCACTGCTGATGCATCTGGTGCAAAACATCTCAACATCACATTAACTAGATCCAAATTTGAGGCTCTAGTTAATAACTTGATCGAACGAACTAAGGCTCCATGTCAGAGCTGTTTGAAGGATGCAAATATTTCTACCAAGGACATTGACGAAGTTCTTCTTGTTGGAGGGATGACTCGTGTGCCAAAAGTCCAGGAGGTGGTTTCGTCAATTTTTGGCAAGTCTCCTTGTAAAGGAGTAAATCCTGACGAGGCAGTTGCAATGGGAGCAGCACTCCAGGGTGGTATCCTACGTGGAGATGTCAAAGAGCTCCTACTCTTGGATGTTACACCACTCTCTTTGGGTATTGAGACTTTGGGTGGTATCTTTACAAGGTTAATCAACCGCAACACTACTATTCCTACAAAAAAGAGTCAGGTAATCCTTCAATCCACTGCTGATTGTTATATAACAACTGTCTCTAAGTTGCTAATCTTTGGAAGTGTATTCTGTCTTTACGAAGTCTTTTCAACGGCAGCTGACAATCAAACACAAGTAGGAATCAAAGTGTTACAAGGTGAGCGGGAAATGGCTTCCGACAACAAAATGCTTGGAGAATTTGAGCTTGTTGGCCTTCCTCCTGCTCCCAGAGGTATGCCTCAGATTGAGGTCACCTTTGACATTGATGCCAACGGTATTGTTACCGTGTCTGCCAAGGACAAGTCCACTGGCAAAGAGCAGCAAATTACTATTAAGTCATCTGGTGGGCTTTCTGATGATGATATTCAAAAGATGGTCCAAGAAGCCGAGTTGCATGCTCAGAAAGACCAAGAAAGAAAGAGTCTGATCGATATTAGAAACTCTGCAGACACATCAATTTACAGCATTGAGAAAAGCCTAAGTGAATACAGGGAGAAGATACCTGCCGAAGTGGCTAAGGAAATCGAGGATGCTGTTTCTGATTTGAGAAGTGCGATGGATGGGGACAGTGCAGATGAAATCAAGTCGAAACTTGATGCTGCAAACAAGGCCGTCTCCAAGATTGGAGAGCACATGTCAGGTGGCTCTAGTAGTGGTCCCTCATCTGGTGGTTCTCAAGGTGGGGACCAGGCTCCAGAGGCAGAATATGAAGAGGTGAAGAAGTGA
Protein sequence

>MsG0280006520.01.T01

MAAATALLRSLRRRDVASSSFSAYRSLIGNTKPAHVGHNWSSLSRPFSSRPAGNDVIGIDLGTTNSCVSVMEGKNPKVIENSEGARTTPSVVAFSQKGELLVGTPAKRQAVTNPVNTISGAKRLIGRRFEDAQTQKEMKMVPYKIVKAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAEAYLGKSVSKAVITVPAYFNDAQRQATKDAGRIAGLEVLRIINEPTAAALSYGMTNKEGLIAVKATNGDTFLGGEDFDNALLDFLVNEFKRSESIDLSKDKLALQRLREAAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSKFEALVNNLIERTKAPCQSCLKDANISTKDIDEVLLVGGMTRVPKVQEVVSSIFGKSPCKGVNPDEAVAMGAALQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVILQSTADCYITTVSKLLIFGSVFCLYEVFSTAADNQTQVGIKVLQGEREMASDNKMLGEFELVGLPPAPRGMPQIEVTFDIDANGIVTVSAKDKSTGKEQQITIKSSGGLSDDDIQKMVQEAELHAQKDQERKSLIDIRNSADTSIYSIEKSLSEYREKIPAEVAKEIEDAVSDLRSAMDGDSADEIKSKLDAANKAVSKIGEHMSGGSSSGPSSGGSQGGDQAPEAEYEEVKK*