AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280006307.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280006307.01.T01 MTR_2g005690 98.868 707 7 1 1 706 1 707 0.0 1407
MsG0280006307.01.T01 MTR_2g010020 55.556 621 270 3 45 663 31 647 0.0 689
MsG0280006307.01.T01 MTR_2g010020 53.621 649 288 4 17 663 11 648 0.0 689
MsG0280006307.01.T01 MTR_4g092920 55.788 622 270 3 44 663 27 645 0.0 687
MsG0280006307.01.T01 MTR_4g092920 56.920 513 218 2 151 663 2 511 0.0 585
MsG0280006307.01.T01 MTR_8g099945 51.458 583 252 11 70 632 38 609 0.0 545
MsG0280006307.01.T01 MTR_8g099795 51.820 577 259 11 70 632 38 609 0.0 543
MsG0280006307.01.T01 MTR_4g063710 47.731 639 304 12 71 684 10 643 0.0 531
MsG0280006307.01.T01 MTR_4g063720 49.085 601 282 10 71 652 10 605 0.0 531
MsG0280006307.01.T01 MTR_7g024390 50.865 578 253 10 71 627 10 577 0.0 530
MsG0280006307.01.T01 MTR_7g099680 47.278 643 299 14 71 687 10 638 1.17e-180 530
MsG0280006307.01.T01 MTR_4g130540 50.256 585 267 11 69 637 7 583 1.46e-179 527
MsG0280006307.01.T01 MTR_7g024580 47.500 640 295 13 71 680 10 638 3.55e-179 526
MsG0280006307.01.T01 MTR_7g451380 46.774 558 277 9 71 613 10 562 9.67e-158 470
MsG0280006307.01.T01 MTR_7g021440 45.769 579 287 14 71 630 10 580 7.86e-155 462
MsG0280006307.01.T01 MTR_7g026030 46.512 559 275 12 71 613 10 560 6.59e-154 460
MsG0280006307.01.T01 MTR_2g017730 45.941 579 284 12 69 627 7 576 1.62e-152 456
MsG0280006307.01.T01 MTR_2g038260 46.524 561 278 11 69 613 8 562 2.26e-152 456
MsG0280006307.01.T01 MTR_8g032650 46.416 558 277 11 71 613 10 560 2.08e-151 454
MsG0280006307.01.T01 MTR_7g025790 46.057 558 279 11 71 613 10 560 5.37e-148 444
MsG0280006307.01.T01 MTR_2g032550 43.869 579 303 10 69 630 9 582 7.00e-148 444
MsG0280006307.01.T01 MTR_7g026090 44.154 573 301 10 71 630 10 576 7.52e-148 444
MsG0280006307.01.T01 MTR_7g025770 45.745 564 285 10 64 612 3 560 9.28e-148 444
MsG0280006307.01.T01 MTR_7g025820 45.161 558 285 10 71 613 10 561 4.06e-147 442
MsG0280006307.01.T01 MTR_7g078190 45.536 560 281 12 71 613 10 562 7.45e-147 442
MsG0280006307.01.T01 MTR_7g024030 45.714 560 282 12 69 613 8 560 5.99e-146 439
MsG0280006307.01.T01 MTR_7g025720 44.332 591 302 14 71 643 10 591 3.33e-145 438
MsG0280006307.01.T01 MTR_7g025620 43.463 589 303 14 71 639 10 588 8.36e-145 436
MsG0280006307.01.T01 MTR_7g025760 42.123 584 315 11 71 637 10 587 5.19e-143 432
MsG0280006307.01.T01 MTR_5g066800 44.366 568 284 11 71 612 10 571 1.10e-142 431
MsG0280006307.01.T01 MTR_6g033760 43.501 577 303 11 68 627 6 576 1.13e-142 431
MsG0280006307.01.T01 MTR_7g026170 45.098 561 285 12 69 613 8 561 1.33e-142 431
MsG0280006307.01.T01 MTR_4g079590 44.345 557 289 10 71 612 10 560 5.20e-142 429
MsG0280006307.01.T01 MTR_4g063720 43.428 601 245 12 71 652 10 534 1.08e-141 427
MsG0280006307.01.T01 MTR_7g026110 44.894 568 292 12 71 624 10 570 1.45e-141 428
MsG0280006307.01.T01 MTR_7g011590 45.668 554 275 12 71 613 10 548 4.47e-141 426
MsG0280006307.01.T01 MTR_2g022050 43.261 601 309 11 71 649 10 600 1.84e-140 425
MsG0280006307.01.T01 MTR_7g078210 45.617 559 281 12 71 613 10 561 8.68e-140 424
MsG0280006307.01.T01 MTR_7g029415 45.259 559 282 13 71 613 17 567 3.90e-139 422
MsG0280006307.01.T01 MTR_7g025740 42.237 599 313 15 71 643 10 601 4.95e-139 422
MsG0280006307.01.T01 MTR_6g033870 42.539 583 297 12 71 626 11 582 6.73e-138 421
MsG0280006307.01.T01 MTR_6g033850 42.857 581 299 12 68 626 6 575 1.38e-137 420
MsG0280006307.01.T01 MTR_7g025630 43.243 555 285 12 71 613 10 546 5.99e-135 410
MsG0280006307.01.T01 MTR_2g437440 42.729 557 283 10 71 613 10 544 8.22e-135 410
MsG0280006307.01.T01 MTR_7g074460 44.803 558 269 12 71 613 10 543 2.84e-134 409
MsG0280006307.01.T01 MTR_2g038270 42.857 567 294 13 70 612 9 569 3.55e-132 404
MsG0280006307.01.T01 MTR_6g033955 42.424 561 286 11 71 606 10 558 3.77e-132 405
MsG0280006307.01.T01 MTR_7g025260 43.570 521 274 9 108 613 18 533 1.08e-131 402
MsG0280006307.01.T01 MTR_6g033820 41.446 567 297 10 71 613 10 565 1.03e-129 399
MsG0280006307.01.T01 MTR_8g103930 42.123 584 288 14 71 626 12 573 1.07e-129 397
MsG0280006307.01.T01 MTR_4g027145 41.885 573 298 14 69 613 8 573 9.05e-128 393
MsG0280006307.01.T01 MTR_7g026140 42.424 561 284 13 69 613 8 545 1.96e-127 392
MsG0280006307.01.T01 MTR_2g032580 39.672 610 311 14 71 659 10 583 2.47e-127 390
MsG0280006307.01.T01 MTR_7g026130 44.569 534 257 13 69 585 8 519 3.11e-126 392
MsG0280006307.01.T01 MTR_1g017130 41.429 560 267 12 69 613 8 521 9.06e-126 387
MsG0280006307.01.T01 MTR_7g451360 42.523 555 246 13 71 613 10 503 4.02e-123 379
MsG0280006307.01.T01 MTR_6g033800 42.827 467 252 7 174 630 27 488 2.74e-114 356
MsG0280006307.01.T01 MTR_7g007000 40.000 565 265 13 69 613 8 518 1.22e-112 352
MsG0280006307.01.T01 MTR_7g035155 39.568 556 269 11 69 613 8 507 2.29e-111 348
MsG0280006307.01.T01 MTR_2g040220 38.957 575 261 14 62 613 1006 1513 9.55e-98 330
MsG0280006307.01.T01 MTR_1g041565 37.345 565 270 14 71 624 6 497 6.36e-97 310
MsG0280006307.01.T01 MTR_2g032160 45.283 371 187 7 71 430 10 375 2.19e-90 290
MsG0280006307.01.T01 MTR_2g040260 42.723 426 210 10 48 453 1016 1427 1.21e-88 304
MsG0280006307.01.T01 MTR_2g040160 42.654 422 216 8 48 453 1087 1498 3.79e-88 303
MsG0280006307.01.T01 MTR_2g040370 42.453 424 224 8 29 443 992 1404 1.14e-87 301
MsG0280006307.01.T01 MTR_2g040370 44.588 388 192 8 71 445 1414 1791 7.31e-80 279
MsG0280006307.01.T01 MTR_2g040370 42.453 424 224 8 29 443 992 1404 1.29e-87 301
MsG0280006307.01.T01 MTR_2g040370 43.968 373 186 8 71 430 1414 1776 2.95e-79 277
MsG0280006307.01.T01 MTR_2g040350 42.488 426 222 10 46 453 793 1213 1.32e-85 293
MsG0280006307.01.T01 MTR_2g040350 42.488 426 222 10 46 453 1011 1431 3.35e-85 294
MsG0280006307.01.T01 MTR_6g034005 37.255 459 268 9 146 595 8 455 6.10e-83 277
MsG0280006307.01.T01 MTR_1g077230 48.551 276 131 5 69 334 8 282 5.79e-74 241
MsG0280006307.01.T01 MTR_7g026080 50.612 245 99 7 71 300 10 247 2.09e-62 209
MsG0280006307.01.T01 MTR_4g012050 29.283 502 321 10 70 547 3 494 1.54e-56 207
MsG0280006307.01.T01 MTR_4g088515 32.794 433 199 13 65 489 271 619 1.35e-55 201
MsG0280006307.01.T01 MTR_2g031670 45.923 233 113 5 81 301 44 275 6.66e-55 192
MsG0280006307.01.T01 MTR_3g051300 29.878 492 320 10 70 547 3 483 4.24e-54 199
MsG0280006307.01.T01 MTR_6g033855 35.380 342 134 4 174 512 40 297 4.31e-54 189
MsG0280006307.01.T01 MTR_2g102180 30.926 443 274 9 70 487 3 438 6.96e-54 199
MsG0280006307.01.T01 MTR_7g026050 36.025 322 168 6 297 612 1 290 6.11e-53 187
MsG0280006307.01.T01 MTR_5g006180 29.644 506 305 15 68 547 27 507 2.02e-52 191
MsG0280006307.01.T01 MTR_5g092570 28.543 508 312 11 70 547 3 489 7.20e-51 190
MsG0280006307.01.T01 MTR_6g033810 38.000 300 133 4 174 468 40 291 6.64e-48 171
MsG0280006307.01.T01 MTR_1207s0010 51.515 165 77 1 174 335 11 175 1.63e-45 160
MsG0280006307.01.T01 MTR_4g115780 29.490 529 321 15 68 558 138 652 8.74e-45 171
MsG0280006307.01.T01 MTR_1g077240 42.562 242 133 4 381 617 4 244 9.36e-43 157
MsG0280006307.01.T01 MTR_4g107920 30.402 398 246 10 172 549 120 506 2.76e-42 162
MsG0280006307.01.T01 MTR_5g090110 28.056 499 290 16 68 535 26 486 9.22e-42 160
MsG0280006307.01.T01 MTR_3g081170 26.840 462 286 14 61 481 17 467 5.96e-38 152
MsG0280006307.01.T01 MTR_6g478100 39.908 218 108 5 92 301 5 207 4.80e-36 139
MsG0280006307.01.T01 MTR_5g097190 39.095 243 98 7 69 305 157 355 4.29e-34 134
MsG0280006307.01.T01 MTR_5g005870 32.258 279 179 9 357 630 71 344 2.26e-33 133
MsG0280006307.01.T01 MTR_7g074540 43.448 145 80 2 469 612 1 144 9.01e-29 114
MsG0280006307.01.T01 MTR_7g026180 49.587 121 57 2 136 252 21 141 9.78e-26 109
MsG0280006307.01.T01 MTR_7g451390 46.825 126 65 2 489 613 10 134 2.90e-24 101
MsG0280006307.01.T01 MTR_2g017710 33.333 255 82 8 285 535 25 195 3.29e-22 97.4
MsG0280006307.01.T01 MTR_2g040355 28.212 358 124 10 245 599 2 229 3.61e-22 98.2
MsG0280006307.01.T01 MTR_1g116250 33.014 209 101 6 426 630 79 252 5.45e-20 91.3
MsG0280006307.01.T01 MTR_1g068900 42.143 140 72 5 479 613 23 158 4.55e-19 85.5
MsG0280006307.01.T01 MTR_6g033910 31.019 216 98 4 124 333 9 179 3.71e-18 83.6
MsG0280006307.01.T01 MTR_4g115860 38.710 93 57 0 449 541 29 121 1.97e-15 73.6
MsG0280006307.01.T01 MTR_5g005890 36.697 109 66 2 239 344 66 174 1.72e-12 67.0
MsG0280006307.01.T01 MTR_2g040375 50.000 68 34 0 443 510 43 110 2.59e-12 64.7
MsG0280006307.01.T01 MTR_6g033805 51.429 70 32 2 65 133 3 71 2.97e-12 63.2
MsG0280006307.01.T01 MTR_4g027235 52.239 67 29 2 69 133 8 73 2.47e-11 60.5
MsG0280006307.01.T01 MTR_4g027085 52.239 67 29 2 69 133 8 73 2.47e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280006307.01.T01 AT5G49910 84.094 723 88 10 3 705 2 717 0.0 1171
MsG0280006307.01.T01 AT4G24280 83.310 719 103 5 3 706 2 718 0.0 1151
MsG0280006307.01.T01 AT5G09590 54.504 655 270 6 14 663 20 651 0.0 677
MsG0280006307.01.T01 AT4G37910 55.935 615 266 3 51 663 35 646 0.0 659
MsG0280006307.01.T01 AT4G37910 55.935 615 266 3 51 663 35 646 0.0 659
MsG0280006307.01.T01 AT5G28540 52.787 574 250 11 70 628 37 604 0.0 552
MsG0280006307.01.T01 AT5G42020 48.957 623 294 11 70 674 42 658 0.0 550
MsG0280006307.01.T01 AT5G42020 48.957 623 294 11 70 674 37 653 0.0 550
MsG0280006307.01.T01 AT5G02490 48.918 601 283 10 71 652 10 605 0.0 531
MsG0280006307.01.T01 AT5G02500 50.087 573 265 9 71 627 10 577 0.0 531
MsG0280006307.01.T01 AT3G12580 47.326 617 301 10 71 668 10 621 9.53e-179 525
MsG0280006307.01.T01 AT1G56410 48.700 577 277 8 71 633 10 581 9.47e-177 518
MsG0280006307.01.T01 AT3G09440 48.918 601 283 11 71 652 10 605 1.14e-176 520
MsG0280006307.01.T01 AT3G09440 48.918 601 283 11 71 652 10 605 1.14e-176 520
MsG0280006307.01.T01 AT3G09440 48.918 601 283 11 71 652 10 605 1.14e-176 520
MsG0280006307.01.T01 AT3G09440 48.918 601 283 11 71 652 10 605 1.14e-176 520
MsG0280006307.01.T01 AT1G16030 48.557 589 282 9 67 639 5 588 7.49e-176 517
MsG0280006307.01.T01 AT1G09080 51.215 576 263 10 70 632 42 612 1.73e-173 512
MsG0280006307.01.T01 AT1G09080 51.215 576 263 10 70 632 52 622 2.05e-173 512
MsG0280006307.01.T01 AT5G42020 53.279 488 210 9 70 545 37 518 4.33e-161 478
MsG0280006307.01.T01 AT5G02500 48.312 385 185 6 71 446 10 389 1.57e-109 342
MsG0280006307.01.T01 AT2G32120 30.556 504 310 11 68 549 28 513 2.54e-58 207
MsG0280006307.01.T01 AT2G32120 30.556 504 310 11 68 549 28 513 2.54e-58 207
MsG0280006307.01.T01 AT1G79920 29.331 508 313 14 70 547 3 494 5.04e-57 207
MsG0280006307.01.T01 AT1G79920 29.331 508 313 14 70 547 3 494 5.45e-57 207
MsG0280006307.01.T01 AT1G79920 29.331 508 313 14 70 547 3 494 5.45e-57 207
MsG0280006307.01.T01 AT1G79920 29.331 508 313 14 70 547 3 494 5.45e-57 207
MsG0280006307.01.T01 AT1G79930 29.134 508 314 13 70 547 3 494 4.06e-56 205
MsG0280006307.01.T01 AT1G79930 29.134 508 314 13 70 547 3 494 4.90e-56 205
MsG0280006307.01.T01 AT1G11660 28.571 511 337 11 70 561 3 504 4.89e-54 199
MsG0280006307.01.T01 AT1G11660 28.571 511 337 11 70 561 3 504 4.89e-54 199
MsG0280006307.01.T01 AT1G11660 28.571 511 337 11 70 561 3 504 4.89e-54 199
MsG0280006307.01.T01 AT1G11660 28.694 467 306 10 114 561 9 467 1.26e-47 180
MsG0280006307.01.T01 AT4G16660 26.840 462 299 12 70 497 26 482 2.06e-42 166
MsG0280006307.01.T01 AT4G16660 26.840 462 299 12 70 497 50 506 2.10e-42 166

Find 252 sgRNAs with CRISPR-Local

Find 321 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTGGGAAGGGTAGTGTTTC+TGG 0.104549 2:-289557 None:intergenic
CTTTCTGTCGGTGGATAATT+TGG 0.122261 2:-287647 None:intergenic
TTCAAACAACTCCCCAAATT+AGG 0.163204 2:+287447 MsG0280006307.01.T01:five_prime_UTR
ATGAAACCCTAACCCTAATT+TGG 0.168091 2:-287460 None:intergenic
AGAAACCAAGGCCGTGTATT+TGG 0.174826 2:-287513 None:intergenic
GAGCTTAAAGATGCTATTTC+TGG 0.211733 2:+290174 MsG0280006307.01.T01:CDS
GACGAGTCTGTCGCCGTTCT+TGG 0.217047 2:-287818 None:intergenic
TGCCCTTGGGGCTGCAGTTC+AGG 0.235738 2:+289264 MsG0280006307.01.T01:CDS
CCATGGCATCTTTAATAGTT+TGG 0.245937 2:-290206 None:intergenic
AGTTATAGAGATAATTTAAT+AGG 0.267744 2:+290401 MsG0280006307.01.T01:exon
TTCTCCATTGTCCTTGGGTT+TGG 0.279104 2:+289501 MsG0280006307.01.T01:CDS
GACGCACGTTTCTGTATCTT+TGG 0.280336 2:+290527 MsG0280006307.01.T01:three_prime_UTR
ACTGCTGCATCCTTGGCTTA+TGG 0.282032 2:+288304 MsG0280006307.01.T01:CDS
CTTCCCTGTGCCCTTGTCTA+TGG 0.287108 2:-289782 None:intergenic
GTGCTTCTTCCGTGCTAAAT+TGG 0.303995 2:+290438 MsG0280006307.01.T01:three_prime_UTR
ATTTCCTTCCTTCCATTCAT+TGG 0.304480 2:+287357 MsG0280006307.01.T01:five_prime_UTR
CTCTTCCACTTCTATCCATT+TGG 0.311552 2:+287399 MsG0280006307.01.T01:five_prime_UTR
TGTAGAAATTAATGTCCTTC+AGG 0.311881 2:+289624 MsG0280006307.01.T01:CDS
TCAAACAACTCCCCAAATTA+GGG 0.314528 2:+287448 MsG0280006307.01.T01:five_prime_UTR
GACAGCTGAGAAAGCTAAAA+TGG 0.319675 2:+288667 MsG0280006307.01.T01:CDS
AGATGTTTCTCCATTGTCCT+TGG 0.323323 2:+289495 MsG0280006307.01.T01:CDS
TGAAACCCTAACCCTAATTT+GGG 0.323385 2:-287459 None:intergenic
ATGCAGGTTCGTATCTTAAT+AGG 0.326245 2:-290650 None:intergenic
AGGGTGAGAGAGAATTTGTT+AGG 0.327608 2:+289644 MsG0280006307.01.T01:CDS
GGATGCAAAACTCTCAATTA+AGG 0.328971 2:+289126 MsG0280006307.01.T01:CDS
CATGGCATCTTTAATAGTTT+GGG 0.330953 2:-290205 None:intergenic
CAACTCCCCAAATTAGGGTT+AGG 0.337705 2:+287453 MsG0280006307.01.T01:five_prime_UTR
AAACAGGATATTACCATTAC+TGG 0.341919 2:+289805 MsG0280006307.01.T01:CDS
TTTGAAGTGCTCTCTACTTC+TGG 0.345624 2:+288418 MsG0280006307.01.T01:CDS
GTGGCCGAAGAAAAGGGTTT+TGG 0.346231 2:-287581 None:intergenic
TTTCTGTCGGTGGATAATTT+GGG 0.348553 2:-287646 None:intergenic
CTGGATTGACAGTGACATTT+GGG 0.351553 2:-289231 None:intergenic
GAAAGTTGTCGGTATCGATT+TGG 0.352181 2:+287696 MsG0280006307.01.T01:CDS
TCTGGATTGACAGTGACATT+TGG 0.354339 2:-289232 None:intergenic
CTTTCAATTGCTTCTCAGTC+TGG 0.359163 2:-290095 None:intergenic
AAGAGTGGTCTCAATATGTT+TGG 0.366947 2:-288861 None:intergenic
GAAACCAAGGCCGTGTATTT+GGG 0.367690 2:-287512 None:intergenic
AAGGATGCAGGCAGGATTGC+TGG 0.369853 2:+288250 MsG0280006307.01.T01:CDS
ATTGATGAGGTGATTCTTGT+TGG 0.375118 2:+289151 MsG0280006307.01.T01:CDS
AAACTCGATTGTCCAGCTAT+TGG 0.377600 2:+287988 MsG0280006307.01.T01:CDS
ACACCACCTGGTAGCGAGTC+TGG 0.390173 2:+290306 MsG0280006307.01.T01:CDS
CCCGTTTCATTTCTAATCTA+CGG 0.392723 2:-287243 None:intergenic
CCTGCTGCATCTGCAGCTCC+AGG 0.394942 2:-290279 None:intergenic
TTTGAATGATAAAGTAACTA+AGG 0.402530 2:+288177 MsG0280006307.01.T01:CDS
GATGTTTCTCCATTGTCCTT+GGG 0.404643 2:+289496 MsG0280006307.01.T01:CDS
TGAACCAACTGCTGCATCCT+TGG 0.412300 2:+288297 MsG0280006307.01.T01:CDS
ATTTAGGCTGGTGTCTTGGC+TGG 0.414758 2:+289448 MsG0280006307.01.T01:intron
TCCAAGGTCAAAGACCAAAA+TGG 0.416169 2:-288350 None:intergenic
CCAAGGGCAACCACTTCATC+TGG 0.421073 2:-289250 None:intergenic
AGCAATCCTGCCTGCATCCT+TGG 0.421237 2:-288248 None:intergenic
TTCTCTGTGAAGAGGTTCAT+TGG 0.423406 2:+287889 MsG0280006307.01.T01:CDS
CACAGAGAAGAAGGTGTTCT+CGG 0.423446 2:-287875 None:intergenic
AGAGTTGTTGATTGGTTGGC+TGG 0.425635 2:+288578 MsG0280006307.01.T01:CDS
GTGGGAAGGGTAGTGTTTCT+GGG 0.426262 2:-289556 None:intergenic
CAGATGAAGTGGTTGCCCTT+GGG 0.432611 2:+289251 MsG0280006307.01.T01:CDS
TGCGGAACCCCACGGGGAGC+AGG 0.433702 2:-289709 None:intergenic
TCTTACAAGGGCTAAATTTG+AGG 0.438497 2:+288880 MsG0280006307.01.T01:CDS
AAAGTTGTCGGTATCGATTT+GGG 0.440783 2:+287697 MsG0280006307.01.T01:CDS
AGAGTGGTCTCAATATGTTT+GGG 0.441226 2:-288860 None:intergenic
ATTGAAAGAGCTAGGAGAAA+AGG 0.442500 2:+290110 MsG0280006307.01.T01:CDS
ACCGTAGATTAGAAATGAAA+CGG 0.444068 2:+287242 MsG0280006307.01.T01:five_prime_UTR
GGTAGGTTTGCCACCTTCCA+TGG 0.444552 2:-287743 None:intergenic
ACCTTCGGCGTTGGTGATGA+TGG 0.444925 2:-287764 None:intergenic
GAGCTTGTTTGTCCTTCAAA+AGG 0.446462 2:-288628 None:intergenic
GACTATAGAGAGTTGTTGAT+TGG 0.448100 2:+288570 MsG0280006307.01.T01:intron
CGGTCAGATTGCCAAGCGTC+AGG 0.448199 2:+287840 MsG0280006307.01.T01:CDS
TACTTCTGGTGATACACACT+TGG 0.448457 2:+288432 MsG0280006307.01.T01:CDS
ATTGATTTAGGCTGGTGTCT+TGG 0.448822 2:+289444 MsG0280006307.01.T01:intron
TGAGACGGTGGCCGAAGAAA+AGG 0.449220 2:-287588 None:intergenic
TGCCATGGCTGCCCTCAATC+AGG 0.451859 2:+290221 MsG0280006307.01.T01:CDS
AACACGTATCCCTGCTGTTC+AGG 0.452328 2:+289180 MsG0280006307.01.T01:CDS
TCATCCATCCTCTCGCCAAC+CGG 0.456992 2:-287212 None:intergenic
GCCACCTTCCATGGCGGCGA+CGG 0.457667 2:-287734 None:intergenic
AACTCCCCAAATTAGGGTTA+GGG 0.459448 2:+287454 MsG0280006307.01.T01:five_prime_UTR
GTTAGGGACAATAAATCTCT+TGG 0.460837 2:+289661 MsG0280006307.01.T01:CDS
CCAGATGAAGTGGTTGCCCT+TGG 0.461546 2:+289250 MsG0280006307.01.T01:CDS
TGCTGAAGAAATTTCTGCTC+AGG 0.463110 2:+288023 MsG0280006307.01.T01:CDS
TGAGAGAGGATGGATAGGTT+TGG 0.466095 2:-287315 None:intergenic
CAAGGGCACAGGGAAGAAAC+AGG 0.466939 2:+289789 MsG0280006307.01.T01:CDS
TTTACAAGCTCCTGAACAGC+AGG 0.471374 2:-289190 None:intergenic
ACCTTCCATGGCGGCGACGG+CGG 0.475434 2:-287731 None:intergenic
TTGGTCTTTGACCTTGGAGG+TGG 0.476298 2:+288355 MsG0280006307.01.T01:CDS
CCGTAGATTAGAAATGAAAC+GGG 0.476489 2:+287243 MsG0280006307.01.T01:five_prime_UTR
GAGGGGCCAGACTCGCTACC+AGG 0.477166 2:-290312 None:intergenic
TATGTTCAGATCTTCTTGAC+AGG 0.478172 2:+288906 MsG0280006307.01.T01:CDS
GCTGCCCAAATACACGGCCT+TGG 0.482140 2:+287508 MsG0280006307.01.T01:CDS
TAATTTGGGGAGTTGTTTGA+AGG 0.483956 2:-287445 None:intergenic
ATCTCTTGGTAGCTTCCGCT+TGG 0.485746 2:+289675 MsG0280006307.01.T01:CDS
ATTAACGACGGCCTGACGCT+TGG 0.485806 2:-287851 None:intergenic
AAGTTCGACATTGATGCAAA+TGG 0.486650 2:+289742 MsG0280006307.01.T01:CDS
CAGCAACAACAACTACCAAA+TGG 0.491503 2:-287414 None:intergenic
CTGCATAACTTCCTGATTGA+GGG 0.491953 2:-290232 None:intergenic
ATGGAAGGAAGGAAATGAAA+AGG 0.492091 2:-287350 None:intergenic
TTCAATCTGCGGAACCCCAC+GGG 0.492109 2:-289716 None:intergenic
GTATTCCTCCTGCTCCCCGT+GGG 0.492587 2:+289701 MsG0280006307.01.T01:CDS
GAATGCGGCGCGAGGGAAGG+TGG 0.493111 2:-287623 None:intergenic
ACAGAGAAGAAGGTGTTCTC+GGG 0.493212 2:-287874 None:intergenic
TCATCAGGCAAGGGAGCAGA+TGG 0.493669 2:+290342 MsG0280006307.01.T01:CDS
GTAGAAATTAATGTCCTTCA+GGG 0.494626 2:+289625 MsG0280006307.01.T01:CDS
CAAGGTACTGGCACCAGTAA+TGG 0.496725 2:-289818 None:intergenic
AGAAAAGGTGGAAGCAAAGC+TGG 0.498767 2:+290149 MsG0280006307.01.T01:CDS
GATGAGGTGATTCTTGTTGG+TGG 0.498989 2:+289154 MsG0280006307.01.T01:CDS
TGTGAATCATTGAAGTATGC+AGG 0.500733 2:-288214 None:intergenic
TTTGGTGAGAGAGGATGGAT+AGG 0.500981 2:-287320 None:intergenic
GCTGCATAACTTCCTGATTG+AGG 0.501316 2:-290233 None:intergenic
AAACTATAATAACCAATGAA+TGG 0.501556 2:-287369 None:intergenic
CCTGGAGCTGCAGATGCAGC+AGG 0.503847 2:+290279 MsG0280006307.01.T01:CDS
GTGTATTTGGGCAGCACTTG+AGG 0.504133 2:-287500 None:intergenic
GGGAGTGGTACGCTGACCTT+CGG 0.504739 2:-287779 None:intergenic
GTCGTCAATGAGAAAGTTGT+CGG 0.504824 2:+287685 MsG0280006307.01.T01:CDS
TGGGTTTGGAAACTCTAGGT+GGG 0.506495 2:+289515 MsG0280006307.01.T01:CDS
GGCCCCTCAGAATCATCATC+AGG 0.507133 2:+290327 MsG0280006307.01.T01:CDS
CTTGCCTGATGATGATTCTG+AGG 0.507741 2:-290331 None:intergenic
CCCTCACTCAAACAAACATC+AGG 0.511377 2:+288699 MsG0280006307.01.T01:CDS
ATAGAGAGTTGTTGATTGGT+TGG 0.512990 2:+288574 MsG0280006307.01.T01:intron
TGGAGCATGAAACAAATTGC+CGG 0.513302 2:+287193 MsG0280006307.01.T01:five_prime_UTR
TCGGCGTTGGTGATGATGGT+AGG 0.514213 2:-287760 None:intergenic
TTGCCTGATGATGATTCTGA+GGG 0.515307 2:-290330 None:intergenic
CTGTGAAGAGGTTCATTGGT+AGG 0.515676 2:+287893 MsG0280006307.01.T01:CDS
TGGAAGGAAGGAAATGAAAA+GGG 0.516313 2:-287349 None:intergenic
ATATTGAGACCACTCTTACA+AGG 0.516752 2:+288867 MsG0280006307.01.T01:CDS
TTCTGTCGGTGGATAATTTG+GGG 0.516816 2:-287645 None:intergenic
AAATTCCGCCGTCGCCGCCA+TGG 0.519355 2:+287726 MsG0280006307.01.T01:CDS
TTCATAACTGCCACAGCAGA+TGG 0.523408 2:+288836 MsG0280006307.01.T01:CDS
GAGCTTGTAAAGAAGATGAC+TGG 0.527440 2:+289202 MsG0280006307.01.T01:CDS
GGGGAATGCGGCGCGAGGGA+AGG 0.529489 2:-287626 None:intergenic
AATCATTTGTAGAATCATGC+AGG 0.530033 2:-290666 None:intergenic
GAACCTCTTCACAGAGAAGA+AGG 0.530342 2:-287884 None:intergenic
AATCAGGAAGTTATGCAGCT+TGG 0.532389 2:+290237 MsG0280006307.01.T01:CDS
GGAGACTTCAAGAGAGATGA+AGG 0.532940 2:+288599 MsG0280006307.01.T01:CDS
TCAGTGCTTGAGGTTGGTGA+TGG 0.533067 2:+288391 MsG0280006307.01.T01:CDS
GGGTGAGAGAGAATTTGTTA+GGG 0.534415 2:+289645 MsG0280006307.01.T01:CDS
ATAATATAATATAGGTCTTG+AGG 0.534538 2:+288128 MsG0280006307.01.T01:intron
TATAATAACCAATGAATGGA+AGG 0.535274 2:-287365 None:intergenic
CTTGGTAGCTTCCGCTTGGA+CGG 0.536040 2:+289679 MsG0280006307.01.T01:CDS
TGATATACAGGTTGAGAGGA+TGG 0.536379 2:+289987 MsG0280006307.01.T01:intron
GAGACGGTGGCCGAAGAAAA+GGG 0.536584 2:-287587 None:intergenic
GATGTCTCAGTGCTTGAGGT+TGG 0.537989 2:+288385 MsG0280006307.01.T01:CDS
GAGCTAGGAGAAAAGGTACC+TGG 0.540979 2:+290117 MsG0280006307.01.T01:CDS
CTGCATCTGCAGCTCCAGGT+TGG 0.542960 2:-290275 None:intergenic
TTGGGTTTGGAAACTCTAGG+TGG 0.543344 2:+289514 MsG0280006307.01.T01:CDS
AATACAGGTATTATTGTGGA+TGG 0.545289 2:+290565 MsG0280006307.01.T01:three_prime_UTR
AAATTTAGCCCTTGTAAGAG+TGG 0.545733 2:-288876 None:intergenic
GTCAGTTGCTGCCATAGACA+AGG 0.546283 2:+289771 MsG0280006307.01.T01:CDS
CTTAAAGATGCTATTTCTGG+TGG 0.546395 2:+290177 MsG0280006307.01.T01:CDS
ATTGCCGGTTGGCGAGAGGA+TGG 0.546447 2:+287208 MsG0280006307.01.T01:five_prime_UTR
TTCCTGATTGAGGGCAGCCA+TGG 0.546693 2:-290223 None:intergenic
CCTTGGCTTATGGTTTCGAA+AGG 0.546888 2:+288314 MsG0280006307.01.T01:CDS
TTTAGCTTTCTCAGCTGTCT+CGG 0.547108 2:-288663 None:intergenic
ACCAGTAGAAAATTCATTGA+GGG 0.551286 2:+289105 MsG0280006307.01.T01:CDS
TATTGAGACCACTCTTACAA+GGG 0.551559 2:+288868 MsG0280006307.01.T01:CDS
GGTAGACAACAGAGTCCGCC+TGG 0.552888 2:-290074 None:intergenic
GAGAAGCAATTGAAAGAGCT+AGG 0.553890 2:+290102 MsG0280006307.01.T01:CDS
AGATGAAGTGGTTGCCCTTG+GGG 0.554418 2:+289252 MsG0280006307.01.T01:CDS
CTCAGAATCATCATCAGGCA+AGG 0.557364 2:+290332 MsG0280006307.01.T01:CDS
TCCGCCGTCGCCGCCATGGA+AGG 0.557762 2:+287730 MsG0280006307.01.T01:CDS
ACCTGGCCCTGTGAAAGAAA+AGG 0.559548 2:+290134 MsG0280006307.01.T01:CDS
GAATTGGAAGTGGAAGAAGA+AGG 0.561488 2:-287550 None:intergenic
ACACCTTCTTCTCTGTGAAG+AGG 0.562706 2:+287881 MsG0280006307.01.T01:CDS
AAGGACATTAATTTCTACAC+TGG 0.563521 2:-289620 None:intergenic
CAAAGGAGGACAAGGAGAAG+AGG 0.565066 2:+290031 MsG0280006307.01.T01:CDS
CACCAGTAGAAAATTCATTG+AGG 0.566996 2:+289104 MsG0280006307.01.T01:CDS
CCTTTCGAAACCATAAGCCA+AGG 0.567775 2:-288314 None:intergenic
GGAATAGGAAGAATTGGAAG+TGG 0.569184 2:-287560 None:intergenic
AAAGGAGGACAAGGAGAAGA+GGG 0.570032 2:+290032 MsG0280006307.01.T01:CDS
CTCATCACTAGGCAAGGTAC+TGG 0.570673 2:-289830 None:intergenic
CTTCAATCTGCGGAACCCCA+CGG 0.570947 2:-289717 None:intergenic
GCCGTCGCCGCCATGGAAGG+TGG 0.571675 2:+287733 MsG0280006307.01.T01:CDS
TTCACAAAGGACTGCTACCA+AGG 0.572205 2:+288231 MsG0280006307.01.T01:CDS
GACCTGAACTGCAGCCCCAA+GGG 0.573604 2:-289266 None:intergenic
GGGTTTCATCTATCTAAACA+TGG 0.575208 2:+287474 MsG0280006307.01.T01:exon
AGGACTGCTACCAAGGATGC+AGG 0.577737 2:+288238 MsG0280006307.01.T01:CDS
AACTACCAAATGGATAGAAG+TGG 0.577897 2:-287404 None:intergenic
GTAAGCAACAACGGAGGGAG+TGG 0.577943 2:-287794 None:intergenic
CTGCTACCAAGGATGCAGGC+AGG 0.578828 2:+288242 MsG0280006307.01.T01:CDS
ATCAGGCAAGGGAGCAGATG+GGG 0.579068 2:+290344 MsG0280006307.01.T01:CDS
GGTGAAAGGCTTTCTGTCGG+TGG 0.579453 2:-287656 None:intergenic
CGACCTGAACTGCAGCCCCA+AGG 0.579884 2:-289267 None:intergenic
CACTGTCAATCCAGATGAAG+TGG 0.585751 2:+289240 MsG0280006307.01.T01:CDS
GGAACCCCACGGGGAGCAGG+AGG 0.586360 2:-289706 None:intergenic
CAGTCTCTATATAACCAACC+TGG 0.588475 2:+290261 MsG0280006307.01.T01:CDS
TTCGGATTGGGGAGAAACCA+AGG 0.588752 2:-287525 None:intergenic
GTGAAATACAGGTATTATTG+TGG 0.588804 2:+290561 MsG0280006307.01.T01:three_prime_UTR
CCTGATGTTTGTTTGAGTGA+GGG 0.590087 2:-288699 None:intergenic
CATCAGGCAAGGGAGCAGAT+GGG 0.592026 2:+290343 MsG0280006307.01.T01:CDS
CCAAACTATTAAAGATGCCA+TGG 0.593171 2:+290206 MsG0280006307.01.T01:CDS
ACCTAGAGTTTCCAAACCCA+AGG 0.594061 2:-289512 None:intergenic
TTGACGACACGGAAGGTGAA+AGG 0.597140 2:-287670 None:intergenic
CAGTACCTTGCCTAGTGATG+AGG 0.597471 2:+289831 MsG0280006307.01.T01:CDS
CTCAATTAAGGATATTGATG+AGG 0.598604 2:+289138 MsG0280006307.01.T01:CDS
ACTTCTGGTGATACACACTT+GGG 0.599635 2:+288433 MsG0280006307.01.T01:CDS
GGTACGCTGACCTTCGGCGT+TGG 0.600932 2:-287773 None:intergenic
GGTATTCCTCCTGCTCCCCG+TGG 0.601224 2:+289700 MsG0280006307.01.T01:CDS
TCCTTGGGTTTGGAAACTCT+AGG 0.601698 2:+289511 MsG0280006307.01.T01:CDS
ACCTGATGTTTGTTTGAGTG+AGG 0.601734 2:-288700 None:intergenic
ATAACCAATGAATGGAAGGA+AGG 0.603126 2:-287361 None:intergenic
CTGCCATAGACAAGGGCACA+GGG 0.603731 2:+289779 MsG0280006307.01.T01:CDS
CAAATTCTCTCTCACCCTGA+AGG 0.606133 2:-289639 None:intergenic
TGCAATAGACACAAAGAACC+AGG 0.606261 2:+290056 MsG0280006307.01.T01:CDS
GTTTCCAAACCCAAGGACAA+TGG 0.606610 2:-289505 None:intergenic
ATATACCTCATCACTAGGCA+AGG 0.607252 2:-289836 None:intergenic
AATTTGGGGAATGCGGCGCG+AGG 0.608723 2:-287631 None:intergenic
GGGTTTGGAAACTCTAGGTG+GGG 0.609313 2:+289516 MsG0280006307.01.T01:CDS
GGTTTGTCCATCAGCAGCGG+TGG 0.609839 2:-289599 None:intergenic
GTTGTTGCTTACACCAAGAA+CGG 0.610720 2:+287805 MsG0280006307.01.T01:CDS
ACAAATTGCCGGTTGGCGAG+AGG 0.610733 2:+287204 MsG0280006307.01.T01:five_prime_UTR
TAAGCCAAGGATGCAGCAGT+TGG 0.611075 2:-288301 None:intergenic
GCATGAAACAAATTGCCGGT+TGG 0.611294 2:+287197 MsG0280006307.01.T01:five_prime_UTR
ATGTTTGGGGCCATCTGCTG+TGG 0.611510 2:-288846 None:intergenic
AGAGTCATTAGAGACGATAA+CGG 0.614625 2:+287958 MsG0280006307.01.T01:CDS
AGAAGATATACCTCATCACT+AGG 0.617745 2:-289841 None:intergenic
ACCATCATCACCAACGCCGA+AGG 0.617924 2:+287763 MsG0280006307.01.T01:CDS
CCTTCCCACCTCAAAATCAG+AGG 0.618118 2:+289570 MsG0280006307.01.T01:CDS
GACTCGCTACCAGGTGGTGT+AGG 0.618229 2:-290303 None:intergenic
TTTCTCATTGACGACACGGA+AGG 0.618619 2:-287677 None:intergenic
TCTGCTGTGGCAGTTATGAA+CGG 0.623015 2:-288833 None:intergenic
GCTGCCATAGACAAGGGCAC+AGG 0.627845 2:+289778 MsG0280006307.01.T01:CDS
CATCAAAAGTACCACCTCCA+AGG 0.629538 2:-288366 None:intergenic
TGGCCCTGTGAAAGAAAAGG+TGG 0.629625 2:+290137 MsG0280006307.01.T01:CDS
TGGATGATATACAGGTTGAG+AGG 0.629889 2:+289983 MsG0280006307.01.T01:intron
GCAGCAGGACCTACACCACC+TGG 0.631841 2:+290294 MsG0280006307.01.T01:CDS
ATTTGGGGAATGCGGCGCGA+GGG 0.634265 2:-287630 None:intergenic
TTGGTGTAAGCAACAACGGA+GGG 0.635190 2:-287799 None:intergenic
TCAAGTGCTGCCCAAATACA+CGG 0.637196 2:+287502 MsG0280006307.01.T01:CDS
TCAGAATCATCATCAGGCAA+GGG 0.642669 2:+290333 MsG0280006307.01.T01:CDS
CAACTTTCTCATTGACGACA+CGG 0.643110 2:-287681 None:intergenic
CATTGGTAGGAAGATGTCTG+AGG 0.643809 2:+287906 MsG0280006307.01.T01:CDS
TGGCGTGATTAGAATTGAGA+CGG 0.645552 2:-287603 None:intergenic
TATTCCTCCTGCTCCCCGTG+GGG 0.646272 2:+289702 MsG0280006307.01.T01:CDS
TCGAACTTCACTTCAATCTG+CGG 0.646442 2:-289727 None:intergenic
GGTTGAGAGGATGGTCAATG+AGG 0.648062 2:+289996 MsG0280006307.01.T01:intron
GAAGGTGAAAGGCTTTCTGT+CGG 0.648443 2:-287659 None:intergenic
GGTGGATAATTTGGGGAATG+CGG 0.649426 2:-287638 None:intergenic
TCTGGTGATACACACTTGGG+TGG 0.651969 2:+288436 MsG0280006307.01.T01:CDS
GTTCTTGGTGTAAGCAACAA+CGG 0.661153 2:-287803 None:intergenic
AGGTTTGCCACCTTCCATGG+CGG 0.661820 2:-287740 None:intergenic
ACTGGTTTGTCCATCAGCAG+CGG 0.667077 2:-289602 None:intergenic
GAGTGGTCTCAATATGTTTG+GGG 0.667521 2:-288859 None:intergenic
TCAGTTGCTGCCATAGACAA+GGG 0.668838 2:+289772 MsG0280006307.01.T01:CDS
TTACAAGCTCCTGAACAGCA+GGG 0.671122 2:-289189 None:intergenic
AAATCACTACCAATTTAGCA+CGG 0.675626 2:-290447 None:intergenic
TCAATCTGCGGAACCCCACG+GGG 0.676124 2:-289715 None:intergenic
GGGCCAGACTCGCTACCAGG+TGG 0.679501 2:-290309 None:intergenic
CAGGAGGAATACCGTCCAAG+CGG 0.683864 2:-289690 None:intergenic
CATACTTCAATGATTCACAA+AGG 0.689827 2:+288218 MsG0280006307.01.T01:CDS
AAGAACGGCGACAGACTCGT+CGG 0.694498 2:+287820 MsG0280006307.01.T01:CDS
TGCCTGATGATGATTCTGAG+GGG 0.696479 2:-290329 None:intergenic
CTTGGTGTAAGCAACAACGG+AGG 0.704805 2:-287800 None:intergenic
CGTGATTAGAATTGAGACGG+TGG 0.705896 2:-287600 None:intergenic
GGTGTTCTCGGGATTAACGA+CGG 0.722290 2:-287863 None:intergenic
GAAACCCTAACCCTAATTTG+GGG 0.725965 2:-287458 None:intergenic
AATAGACACAAAGAACCAGG+CGG 0.795319 2:+290059 MsG0280006307.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATAATATAATATAATAT+AGG + Chr2:288120-288139 MsG0280006307.01.T01:intron 0.0%
!! AGTTATAGAGATAATTTAAT+AGG + Chr2:290401-290420 MsG0280006307.01.T01:exon 15.0%
!! TATTATTATTCTATGTTCTT+AGG + Chr2:288066-288085 MsG0280006307.01.T01:intron 15.0%
!!! TATAATTAGACTTTTCTTAT+AGG + Chr2:290496-290515 MsG0280006307.01.T01:three_prime_UTR 15.0%
!! AAACTATAATAACCAATGAA+TGG - Chr2:287372-287391 None:intergenic 20.0%
!! ATAATATAATATAGGTCTTG+AGG + Chr2:288128-288147 MsG0280006307.01.T01:intron 20.0%
!! TATAGTCAACATACAAAAAT+AGG - Chr2:288557-288576 None:intergenic 20.0%
!! TTTGAATGATAAAGTAACTA+AGG + Chr2:288177-288196 MsG0280006307.01.T01:CDS 20.0%
!!! ACTTGCTATATAATAAAGTA+AGG - Chr2:288493-288512 None:intergenic 20.0%
!!! GTGTATTTTTTGATTGATTT+AGG + Chr2:289432-289451 MsG0280006307.01.T01:intron 20.0%
! CAAGAGATAATTATAAACAC+CGG - Chr2:289965-289984 None:intergenic 25.0%
! TATAATAACCAATGAATGGA+AGG - Chr2:287368-287387 None:intergenic 25.0%
! TCAATCAAAAAATACACATG+AGG - Chr2:289429-289448 None:intergenic 25.0%
! TCAGTGTAACTTATCAAAAA+TGG - Chr2:289343-289362 None:intergenic 25.0%
!! AAATTTTGTCTGTGAAATAC+AGG + Chr2:290550-290569 MsG0280006307.01.T01:three_prime_UTR 25.0%
!! GAAAAACAATGAAACCATTT+TGG + Chr2:288336-288355 MsG0280006307.01.T01:CDS 25.0%
!! TAATTTGTACAAAGCTTGAA+AGG - Chr2:288779-288798 None:intergenic 25.0%
!!! AAATGAAAAGGGTTTTGTTT+TGG - Chr2:287341-287360 None:intergenic 25.0%
!!! ATTTTTTGATTGATTTAGGC+TGG + Chr2:289436-289455 MsG0280006307.01.T01:intron 25.0%
AAACAGGATATTACCATTAC+TGG + Chr2:289805-289824 MsG0280006307.01.T01:CDS 30.0%
AAATCACTACCAATTTAGCA+CGG - Chr2:290450-290469 None:intergenic 30.0%
AAGGACATTAATTTCTACAC+TGG - Chr2:289623-289642 None:intergenic 30.0%
AATACAGGTATTATTGTGGA+TGG + Chr2:290565-290584 MsG0280006307.01.T01:three_prime_UTR 30.0%
ACCAGTAGAAAATTCATTGA+GGG + Chr2:289105-289124 MsG0280006307.01.T01:CDS 30.0%
ACCGTAGATTAGAAATGAAA+CGG + Chr2:287242-287261 MsG0280006307.01.T01:five_prime_UTR 30.0%
ATAAAGTAAGGAAGAAGAAG+TGG - Chr2:288481-288500 None:intergenic 30.0%
CATACTTCAATGATTCACAA+AGG + Chr2:288218-288237 MsG0280006307.01.T01:CDS 30.0%
CATGGCATCTTTAATAGTTT+GGG - Chr2:290208-290227 None:intergenic 30.0%
CGGTGTTTATAATTATCTCT+TGG + Chr2:289963-289982 MsG0280006307.01.T01:intron 30.0%
CTCAATTAAGGATATTGATG+AGG + Chr2:289138-289157 MsG0280006307.01.T01:CDS 30.0%
GTAGAAATTAATGTCCTTCA+GGG + Chr2:289625-289644 MsG0280006307.01.T01:CDS 30.0%
GTGAAATACAGGTATTATTG+TGG + Chr2:290561-290580 MsG0280006307.01.T01:three_prime_UTR 30.0%
TGTAGAAATTAATGTCCTTC+AGG + Chr2:289624-289643 MsG0280006307.01.T01:CDS 30.0%
TTAGAGGGTAACAAAAGATT+TGG - Chr2:288945-288964 None:intergenic 30.0%
TTATCTCTTGGATGATATAC+AGG + Chr2:289975-289994 MsG0280006307.01.T01:intron 30.0%
TTGATAAGTTACACTGAAGT+GGG + Chr2:289346-289365 MsG0280006307.01.T01:intron 30.0%
TTTGATAAGTTACACTGAAG+TGG + Chr2:289345-289364 MsG0280006307.01.T01:intron 30.0%
! TATTCCAAAACCCTTTTCTT+CGG + Chr2:287577-287596 MsG0280006307.01.T01:CDS 30.0%
!!! TTGGTAGTGATTTTTGTCAA+TGG + Chr2:290457-290476 MsG0280006307.01.T01:three_prime_UTR 30.0%
AAATTTAGCCCTTGTAAGAG+TGG - Chr2:288879-288898 None:intergenic 35.0%
AACTACCAAATGGATAGAAG+TGG - Chr2:287407-287426 None:intergenic 35.0%
AACTCATAAACTAGCAGAAG+TGG - Chr2:288754-288773 None:intergenic 35.0%
AAGAGTGGTCTCAATATGTT+TGG - Chr2:288864-288883 None:intergenic 35.0%
AAGTTCGACATTGATGCAAA+TGG + Chr2:289742-289761 MsG0280006307.01.T01:CDS 35.0%
AGAAGATATACCTCATCACT+AGG - Chr2:289844-289863 None:intergenic 35.0%
AGAGTCATTAGAGACGATAA+CGG + Chr2:287958-287977 MsG0280006307.01.T01:CDS 35.0%
AGAGTGGTCTCAATATGTTT+GGG - Chr2:288863-288882 None:intergenic 35.0%
AGCAAGCAGTTCAAAATTAG+AGG - Chr2:288961-288980 None:intergenic 35.0%
ATAACCAATGAATGGAAGGA+AGG - Chr2:287364-287383 None:intergenic 35.0%
ATATTGAGACCACTCTTACA+AGG + Chr2:288867-288886 MsG0280006307.01.T01:CDS 35.0%
ATCAGGTATTTGCTTTCTCA+TGG + Chr2:288716-288735 MsG0280006307.01.T01:intron 35.0%
ATGAAACCCTAACCCTAATT+TGG - Chr2:287463-287482 None:intergenic 35.0%
ATGCAGGTTCGTATCTTAAT+AGG - Chr2:290653-290672 None:intergenic 35.0%
ATGGAAGGAAGGAAATGAAA+AGG - Chr2:287353-287372 None:intergenic 35.0%
ATTGAAAGAGCTAGGAGAAA+AGG + Chr2:290110-290129 MsG0280006307.01.T01:CDS 35.0%
ATTGATGAGGTGATTCTTGT+TGG + Chr2:289151-289170 MsG0280006307.01.T01:CDS 35.0%
ATTTCCTTCCTTCCATTCAT+TGG + Chr2:287357-287376 MsG0280006307.01.T01:five_prime_UTR 35.0%
CACCAGTAGAAAATTCATTG+AGG + Chr2:289104-289123 MsG0280006307.01.T01:CDS 35.0%
CCAAACTATTAAAGATGCCA+TGG + Chr2:290206-290225 MsG0280006307.01.T01:CDS 35.0%
CCATGGCATCTTTAATAGTT+TGG - Chr2:290209-290228 None:intergenic 35.0%
CCCGTTTCATTTCTAATCTA+CGG - Chr2:287246-287265 None:intergenic 35.0%
CCGTAGATTAGAAATGAAAC+GGG + Chr2:287243-287262 MsG0280006307.01.T01:five_prime_UTR 35.0%
CTTTATCTGCTTACTACTTC+TGG + Chr2:289898-289917 MsG0280006307.01.T01:intron 35.0%
GACTATAGAGAGTTGTTGAT+TGG + Chr2:288570-288589 MsG0280006307.01.T01:intron 35.0%
GCAAGCAGTTCAAAATTAGA+GGG - Chr2:288960-288979 None:intergenic 35.0%
GGATGCAAAACTCTCAATTA+AGG + Chr2:289126-289145 MsG0280006307.01.T01:CDS 35.0%
GGGTTTCATCTATCTAAACA+TGG + Chr2:287474-287493 MsG0280006307.01.T01:exon 35.0%
GTGACATTCAATTCAACATC+AGG - Chr2:288984-289003 None:intergenic 35.0%
GTTAGGGACAATAAATCTCT+TGG + Chr2:289661-289680 MsG0280006307.01.T01:CDS 35.0%
TAATTTGGGGAGTTGTTTGA+AGG - Chr2:287448-287467 None:intergenic 35.0%
TAGCAGAAGTGGTTAAAGAT+TGG - Chr2:288743-288762 None:intergenic 35.0%
TATGTTCAGATCTTCTTGAC+AGG + Chr2:288906-288925 MsG0280006307.01.T01:CDS 35.0%
TATTGAGACCACTCTTACAA+GGG + Chr2:288868-288887 MsG0280006307.01.T01:CDS 35.0%
TCAAACAACTCCCCAAATTA+GGG + Chr2:287448-287467 MsG0280006307.01.T01:five_prime_UTR 35.0%
TCTTACAAGGGCTAAATTTG+AGG + Chr2:288880-288899 MsG0280006307.01.T01:CDS 35.0%
TGAAACCCTAACCCTAATTT+GGG - Chr2:287462-287481 None:intergenic 35.0%
TGGAAGGAAGGAAATGAAAA+GGG - Chr2:287352-287371 None:intergenic 35.0%
TGTGAATCATTGAAGTATGC+AGG - Chr2:288217-288236 None:intergenic 35.0%
TTCAAACAACTCCCCAAATT+AGG + Chr2:287447-287466 MsG0280006307.01.T01:five_prime_UTR 35.0%
TTTCTGTCGGTGGATAATTT+GGG - Chr2:287649-287668 None:intergenic 35.0%
! AAGAAGAAGGTTTTCGGATT+GGG - Chr2:287540-287559 None:intergenic 35.0%
! AAGTGGAAGAAGAAGGTTTT+CGG - Chr2:287546-287565 None:intergenic 35.0%
! ATAGAGAGTTGTTGATTGGT+TGG + Chr2:288574-288593 MsG0280006307.01.T01:intron 35.0%
! GCAAATGATTTTCCAATAGC+TGG - Chr2:288003-288022 None:intergenic 35.0%
! GCTTTTGCAATAAAGCTTCA+AGG - Chr2:289042-289061 None:intergenic 35.0%
! TCCCTCAATGAATTTTCTAC+TGG - Chr2:289109-289128 None:intergenic 35.0%
!! AAAGTTGTCGGTATCGATTT+GGG + Chr2:287697-287716 MsG0280006307.01.T01:CDS 35.0%
!! CTTAAAGATGCTATTTCTGG+TGG + Chr2:290177-290196 MsG0280006307.01.T01:CDS 35.0%
!! GAGCTTAAAGATGCTATTTC+TGG + Chr2:290174-290193 MsG0280006307.01.T01:CDS 35.0%
!! TGAAGGTATAGACCTTTTGA+AGG + Chr2:288616-288635 MsG0280006307.01.T01:CDS 35.0%
!!! AAAACCTCTGATTTTGAGGT+GGG - Chr2:289577-289596 None:intergenic 35.0%
!!! GAAGAAAAGGGTTTTGGAAT+AGG - Chr2:287578-287597 None:intergenic 35.0%
!!! GGTTTTGGAATAGGAAGAAT+TGG - Chr2:287569-287588 None:intergenic 35.0%
AAACTCGATTGTCCAGCTAT+TGG + Chr2:287988-288007 MsG0280006307.01.T01:CDS 40.0%
AACTCCCCAAATTAGGGTTA+GGG + Chr2:287454-287473 MsG0280006307.01.T01:five_prime_UTR 40.0%
AATAGACACAAAGAACCAGG+CGG + Chr2:290059-290078 MsG0280006307.01.T01:CDS 40.0%
AATCAGGAAGTTATGCAGCT+TGG + Chr2:290237-290256 MsG0280006307.01.T01:CDS 40.0%
AATTTCTGCTCAGGTAGGTT+AGG + Chr2:288032-288051 MsG0280006307.01.T01:intron 40.0%
ACCTGATGTTTGTTTGAGTG+AGG - Chr2:288703-288722 None:intergenic 40.0%
ACTTCTGGTGATACACACTT+GGG + Chr2:288433-288452 MsG0280006307.01.T01:CDS 40.0%
AGATGTTTCTCCATTGTCCT+TGG + Chr2:289495-289514 MsG0280006307.01.T01:CDS 40.0%
ATATACCTCATCACTAGGCA+AGG - Chr2:289839-289858 None:intergenic 40.0%
CAACTTTCTCATTGACGACA+CGG - Chr2:287684-287703 None:intergenic 40.0%
CAGCAACAACAACTACCAAA+TGG - Chr2:287417-287436 None:intergenic 40.0%
CAGTCTCTATATAACCAACC+TGG + Chr2:290261-290280 MsG0280006307.01.T01:CDS 40.0%
CCTGATGTTTGTTTGAGTGA+GGG - Chr2:288702-288721 None:intergenic 40.0%
CTCTTCCACTTCTATCCATT+TGG + Chr2:287399-287418 MsG0280006307.01.T01:five_prime_UTR 40.0%
CTGCATAACTTCCTGATTGA+GGG - Chr2:290235-290254 None:intergenic 40.0%
CTGGATTGACAGTGACATTT+GGG - Chr2:289234-289253 None:intergenic 40.0%
CTTTCAATTGCTTCTCAGTC+TGG - Chr2:290098-290117 None:intergenic 40.0%
CTTTCTGTCGGTGGATAATT+TGG - Chr2:287650-287669 None:intergenic 40.0%
GAAACCCTAACCCTAATTTG+GGG - Chr2:287461-287480 None:intergenic 40.0%
GAAGAAATTTCTGCTCAGGT+AGG + Chr2:288027-288046 MsG0280006307.01.T01:intron 40.0%
GAATTGGAAGTGGAAGAAGA+AGG - Chr2:287553-287572 None:intergenic 40.0%
GACAGCTGAGAAAGCTAAAA+TGG + Chr2:288667-288686 MsG0280006307.01.T01:CDS 40.0%
GAGAAGCAATTGAAAGAGCT+AGG + Chr2:290102-290121 MsG0280006307.01.T01:CDS 40.0%
GAGCTTGTAAAGAAGATGAC+TGG + Chr2:289202-289221 MsG0280006307.01.T01:CDS 40.0%
GAGTGGTCTCAATATGTTTG+GGG - Chr2:288862-288881 None:intergenic 40.0%
GATGTTTCTCCATTGTCCTT+GGG + Chr2:289496-289515 MsG0280006307.01.T01:CDS 40.0%
GGAATAGGAAGAATTGGAAG+TGG - Chr2:287563-287582 None:intergenic 40.0%
GGAGAGAATGATGTTTCTCT+GGG + Chr2:289367-289386 MsG0280006307.01.T01:intron 40.0%
GTCGTCAATGAGAAAGTTGT+CGG + Chr2:287685-287704 MsG0280006307.01.T01:CDS 40.0%
TACTTCTGGTGATACACACT+TGG + Chr2:288432-288451 MsG0280006307.01.T01:CDS 40.0%
TATCTGCTTACTACTTCTGG+AGG + Chr2:289901-289920 MsG0280006307.01.T01:intron 40.0%
TCAGAATCATCATCAGGCAA+GGG + Chr2:290333-290352 MsG0280006307.01.T01:CDS 40.0%
TCCAAGGTCAAAGACCAAAA+TGG - Chr2:288353-288372 None:intergenic 40.0%
TCGAACTTCACTTCAATCTG+CGG - Chr2:289730-289749 None:intergenic 40.0%
TCTGGATTGACAGTGACATT+TGG - Chr2:289235-289254 None:intergenic 40.0%
TGCAATAGACACAAAGAACC+AGG + Chr2:290056-290075 MsG0280006307.01.T01:CDS 40.0%
TGCTGAAGAAATTTCTGCTC+AGG + Chr2:288023-288042 MsG0280006307.01.T01:CDS 40.0%
TGGAGCATGAAACAAATTGC+CGG + Chr2:287193-287212 MsG0280006307.01.T01:five_prime_UTR 40.0%
TGGCGTGATTAGAATTGAGA+CGG - Chr2:287606-287625 None:intergenic 40.0%
TTCTCTGTGAAGAGGTTCAT+TGG + Chr2:287889-287908 MsG0280006307.01.T01:CDS 40.0%
TTCTGTCGGTGGATAATTTG+GGG - Chr2:287648-287667 None:intergenic 40.0%
! AGAAGAAGGTTTTCGGATTG+GGG - Chr2:287539-287558 None:intergenic 40.0%
! AGGGTGAGAGAGAATTTGTT+AGG + Chr2:289644-289663 MsG0280006307.01.T01:CDS 40.0%
! ATTGATTTAGGCTGGTGTCT+TGG + Chr2:289444-289463 MsG0280006307.01.T01:intron 40.0%
! ATTTTTGTCAATGGAGAGCG+AGG + Chr2:290466-290485 MsG0280006307.01.T01:three_prime_UTR 40.0%
! CTTCCACCTTTTCTTTCACA+GGG - Chr2:290143-290162 None:intergenic 40.0%
! GAAGAAGAAGGTTTTCGGAT+TGG - Chr2:287541-287560 None:intergenic 40.0%
! GAGATTTTCAAAGGAGGACA+AGG + Chr2:290023-290042 MsG0280006307.01.T01:CDS 40.0%
! GAGCTTGTTTGTCCTTCAAA+AGG - Chr2:288631-288650 None:intergenic 40.0%
! GGAGAAAACCTCTGATTTTG+AGG - Chr2:289581-289600 None:intergenic 40.0%
! GTTCTTGGTGTAAGCAACAA+CGG - Chr2:287806-287825 None:intergenic 40.0%
! GTTGTTGCTTACACCAAGAA+CGG + Chr2:287805-287824 MsG0280006307.01.T01:CDS 40.0%
! TGAGGCTGAGAGATTTTCAA+AGG + Chr2:290014-290033 MsG0280006307.01.T01:CDS 40.0%
! TGATATACAGGTTGAGAGGA+TGG + Chr2:289987-290006 MsG0280006307.01.T01:intron 40.0%
! TGGATGATATACAGGTTGAG+AGG + Chr2:289983-290002 MsG0280006307.01.T01:intron 40.0%
! TTGCCTGATGATGATTCTGA+GGG - Chr2:290333-290352 None:intergenic 40.0%
! TTTGAAGTGCTCTCTACTTC+TGG + Chr2:288418-288437 MsG0280006307.01.T01:CDS 40.0%
! TTTTGATGTCTCAGTGCTTG+AGG + Chr2:288381-288400 MsG0280006307.01.T01:CDS 40.0%
! TTTTTGTCAATGGAGAGCGA+GGG + Chr2:290467-290486 MsG0280006307.01.T01:three_prime_UTR 40.0%
!! ACCATTTTGGTCTTTGACCT+TGG + Chr2:288349-288368 MsG0280006307.01.T01:CDS 40.0%
!! ATTTTGGTCTTTGACCTTGG+AGG + Chr2:288352-288371 MsG0280006307.01.T01:CDS 40.0%
!! GAAAACCTCTGATTTTGAGG+TGG - Chr2:289578-289597 None:intergenic 40.0%
!! GAAAGTTGTCGGTATCGATT+TGG + Chr2:287696-287715 MsG0280006307.01.T01:CDS 40.0%
!! GGGTGAGAGAGAATTTGTTA+GGG + Chr2:289645-289664 MsG0280006307.01.T01:CDS 40.0%
!! GGGTGGTGATGATTTTGATA+AGG + Chr2:288453-288472 MsG0280006307.01.T01:CDS 40.0%
!! TGTTACTCCAGCATTGATGT+GGG + Chr2:289931-289950 MsG0280006307.01.T01:intron 40.0%
!! TTGTTACTCCAGCATTGATG+TGG + Chr2:289930-289949 MsG0280006307.01.T01:intron 40.0%
!! TTTAGCTTTCTCAGCTGTCT+CGG - Chr2:288666-288685 None:intergenic 40.0%
!!! TTTGTTTTGGTGAGAGAGGA+TGG - Chr2:287328-287347 None:intergenic 40.0%
AAAGGAGGACAAGGAGAAGA+GGG + Chr2:290032-290051 MsG0280006307.01.T01:CDS 45.0%
ACACCTTCTTCTCTGTGAAG+AGG + Chr2:287881-287900 MsG0280006307.01.T01:CDS 45.0%
ACCTAGAGTTTCCAAACCCA+AGG - Chr2:289515-289534 None:intergenic 45.0%
AGAAAAGGTGGAAGCAAAGC+TGG + Chr2:290149-290168 MsG0280006307.01.T01:CDS 45.0%
AGAAACCAAGGCCGTGTATT+TGG - Chr2:287516-287535 None:intergenic 45.0%
ATTGATGTGGGAAGCTGTTC+CGG + Chr2:289943-289962 MsG0280006307.01.T01:intron 45.0%
CAAATTCTCTCTCACCCTGA+AGG - Chr2:289642-289661 None:intergenic 45.0%
CAACTCCCCAAATTAGGGTT+AGG + Chr2:287453-287472 MsG0280006307.01.T01:five_prime_UTR 45.0%
CACTGTCAATCCAGATGAAG+TGG + Chr2:289240-289259 MsG0280006307.01.T01:CDS 45.0%
CATTGGTAGGAAGATGTCTG+AGG + Chr2:287906-287925 MsG0280006307.01.T01:CDS 45.0%
CCCTCACTCAAACAAACATC+AGG + Chr2:288699-288718 MsG0280006307.01.T01:CDS 45.0%
CCTTGGCTTATGGTTTCGAA+AGG + Chr2:288314-288333 MsG0280006307.01.T01:CDS 45.0%
CCTTTCGAAACCATAAGCCA+AGG - Chr2:288317-288336 None:intergenic 45.0%
CGGTTTAGCTGTTCTCATCA+AGG + Chr2:289288-289307 MsG0280006307.01.T01:intron 45.0%
CGTGATTAGAATTGAGACGG+TGG - Chr2:287603-287622 None:intergenic 45.0%
CTCAGAATCATCATCAGGCA+AGG + Chr2:290332-290351 MsG0280006307.01.T01:CDS 45.0%
CTGTGAAGAGGTTCATTGGT+AGG + Chr2:287893-287912 MsG0280006307.01.T01:CDS 45.0%
GAAACCAAGGCCGTGTATTT+GGG - Chr2:287515-287534 None:intergenic 45.0%
GAACCTCTTCACAGAGAAGA+AGG - Chr2:287887-287906 None:intergenic 45.0%
GAAGGTGAAAGGCTTTCTGT+CGG - Chr2:287662-287681 None:intergenic 45.0%
GACGCACGTTTCTGTATCTT+TGG + Chr2:290527-290546 MsG0280006307.01.T01:three_prime_UTR 45.0%
GATGAGGTGATTCTTGTTGG+TGG + Chr2:289154-289173 MsG0280006307.01.T01:CDS 45.0%
GCATGAAACAAATTGCCGGT+TGG + Chr2:287197-287216 MsG0280006307.01.T01:five_prime_UTR 45.0%
GCTGCATAACTTCCTGATTG+AGG - Chr2:290236-290255 None:intergenic 45.0%
GGAGACTTCAAGAGAGATGA+AGG + Chr2:288599-288618 MsG0280006307.01.T01:CDS 45.0%
GGGAGAGAATGATGTTTCTC+TGG + Chr2:289366-289385 MsG0280006307.01.T01:intron 45.0%
GGTGGATAATTTGGGGAATG+CGG - Chr2:287641-287660 None:intergenic 45.0%
GTGCTTCTTCCGTGCTAAAT+TGG + Chr2:290438-290457 MsG0280006307.01.T01:three_prime_UTR 45.0%
GTTTCCAAACCCAAGGACAA+TGG - Chr2:289508-289527 None:intergenic 45.0%
TCAGTTGCTGCCATAGACAA+GGG + Chr2:289772-289791 MsG0280006307.01.T01:CDS 45.0%
TCCTTGGGTTTGGAAACTCT+AGG + Chr2:289511-289530 MsG0280006307.01.T01:CDS 45.0%
TCTGCTGTGGCAGTTATGAA+CGG - Chr2:288836-288855 None:intergenic 45.0%
TGAGAGAGGATGGATAGGTT+TGG - Chr2:287318-287337 None:intergenic 45.0%
TGGGTTTGGAAACTCTAGGT+GGG + Chr2:289515-289534 MsG0280006307.01.T01:CDS 45.0%
TTACAAGCTCCTGAACAGCA+GGG - Chr2:289192-289211 None:intergenic 45.0%
TTCACAAAGGACTGCTACCA+AGG + Chr2:288231-288250 MsG0280006307.01.T01:CDS 45.0%
TTCATAACTGCCACAGCAGA+TGG + Chr2:288836-288855 MsG0280006307.01.T01:CDS 45.0%
TTCTCCATTGTCCTTGGGTT+TGG + Chr2:289501-289520 MsG0280006307.01.T01:CDS 45.0%
TTGGGTTTGGAAACTCTAGG+TGG + Chr2:289514-289533 MsG0280006307.01.T01:CDS 45.0%
TTGGTGTAAGCAACAACGGA+GGG - Chr2:287802-287821 None:intergenic 45.0%
TTTACAAGCTCCTGAACAGC+AGG - Chr2:289193-289212 None:intergenic 45.0%
TTTCTCATTGACGACACGGA+AGG - Chr2:287680-287699 None:intergenic 45.0%
TTTGGTGAGAGAGGATGGAT+AGG - Chr2:287323-287342 None:intergenic 45.0%
! AGAGTTGTTGATTGGTTGGC+TGG + Chr2:288578-288597 MsG0280006307.01.T01:CDS 45.0%
! CTTGCCTGATGATGATTCTG+AGG - Chr2:290334-290353 None:intergenic 45.0%
! GCTTCCACCTTTTCTTTCAC+AGG - Chr2:290144-290163 None:intergenic 45.0%
! GGCTGAGAGATTTTCAAAGG+AGG + Chr2:290017-290036 MsG0280006307.01.T01:CDS 45.0%
! TCAAGTGCTGCCCAAATACA+CGG + Chr2:287502-287521 MsG0280006307.01.T01:CDS 45.0%
! TGCCTGATGATGATTCTGAG+GGG - Chr2:290332-290351 None:intergenic 45.0%
!! ACAGAGAAGAAGGTGTTCTC+GGG - Chr2:287877-287896 None:intergenic 45.0%
!! CACAGAGAAGAAGGTGTTCT+CGG - Chr2:287878-287897 None:intergenic 45.0%
!! CATCAAAAGTACCACCTCCA+AGG - Chr2:288369-288388 None:intergenic 45.0%
!!! CTCTGATTTTGAGGTGGGAA+GGG - Chr2:289572-289591 None:intergenic 45.0%
!!! GGGTTTTGTTTTGGTGAGAG+AGG - Chr2:287332-287351 None:intergenic 45.0%
AACACGTATCCCTGCTGTTC+AGG + Chr2:289180-289199 MsG0280006307.01.T01:CDS 50.0%
ACAGCTTCCCACATCAATGC+TGG - Chr2:289941-289960 None:intergenic 50.0%
ACCTGGCCCTGTGAAAGAAA+AGG + Chr2:290134-290153 MsG0280006307.01.T01:CDS 50.0%
ACTGCTGCATCCTTGGCTTA+TGG + Chr2:288304-288323 MsG0280006307.01.T01:CDS 50.0%
AGATGAAGTGGTTGCCCTTG+GGG + Chr2:289252-289271 MsG0280006307.01.T01:CDS 50.0%
ATTTAGGCTGGTGTCTTGGC+TGG + Chr2:289448-289467 MsG0280006307.01.T01:intron 50.0%
CAAAGGAGGACAAGGAGAAG+AGG + Chr2:290031-290050 MsG0280006307.01.T01:CDS 50.0%
CAGATGAAGTGGTTGCCCTT+GGG + Chr2:289251-289270 MsG0280006307.01.T01:CDS 50.0%
CAGTACCTTGCCTAGTGATG+AGG + Chr2:289831-289850 MsG0280006307.01.T01:CDS 50.0%
CCTTCCCACCTCAAAATCAG+AGG + Chr2:289570-289589 MsG0280006307.01.T01:CDS 50.0%
CTCATCACTAGGCAAGGTAC+TGG - Chr2:289833-289852 None:intergenic 50.0%
GATGTCTCAGTGCTTGAGGT+TGG + Chr2:288385-288404 MsG0280006307.01.T01:CDS 50.0%
GGGTTTGGAAACTCTAGGTG+GGG + Chr2:289516-289535 MsG0280006307.01.T01:CDS 50.0%
GGTGTTCTCGGGATTAACGA+CGG - Chr2:287866-287885 None:intergenic 50.0%
GGTTGAGAGGATGGTCAATG+AGG + Chr2:289996-290015 MsG0280006307.01.T01:intron 50.0%
GTCAGTTGCTGCCATAGACA+AGG + Chr2:289771-289790 MsG0280006307.01.T01:CDS 50.0%
GTGGGAAGGGTAGTGTTTCT+GGG - Chr2:289559-289578 None:intergenic 50.0%
GTGTATTTGGGCAGCACTTG+AGG - Chr2:287503-287522 None:intergenic 50.0%
TAAGCCAAGGATGCAGCAGT+TGG - Chr2:288304-288323 None:intergenic 50.0%
TCTGGTGATACACACTTGGG+TGG + Chr2:288436-288455 MsG0280006307.01.T01:CDS 50.0%
TGAACCAACTGCTGCATCCT+TGG + Chr2:288297-288316 MsG0280006307.01.T01:CDS 50.0%
TGGCCCTGTGAAAGAAAAGG+TGG + Chr2:290137-290156 MsG0280006307.01.T01:CDS 50.0%
TTGACGACACGGAAGGTGAA+AGG - Chr2:287673-287692 None:intergenic 50.0%
! ACCTTTTCTTTCACAGGGCC+AGG - Chr2:290138-290157 None:intergenic 50.0%
! ATCTCTTGGTAGCTTCCGCT+TGG + Chr2:289675-289694 MsG0280006307.01.T01:CDS 50.0%
! CTTGGTGTAAGCAACAACGG+AGG - Chr2:287803-287822 None:intergenic 50.0%
! GTGGCCGAAGAAAAGGGTTT+TGG - Chr2:287584-287603 None:intergenic 50.0%
! TTCGGATTGGGGAGAAACCA+AGG - Chr2:287528-287547 None:intergenic 50.0%
! TTGGTCTTTGACCTTGGAGG+TGG + Chr2:288355-288374 MsG0280006307.01.T01:CDS 50.0%
!! ACTGGTTTGTCCATCAGCAG+CGG - Chr2:289605-289624 None:intergenic 50.0%
!! CAAGGTACTGGCACCAGTAA+TGG - Chr2:289821-289840 None:intergenic 50.0%
!! GAGCTAGGAGAAAAGGTACC+TGG + Chr2:290117-290136 MsG0280006307.01.T01:CDS 50.0%
!! TCAGTGCTTGAGGTTGGTGA+TGG + Chr2:288391-288410 MsG0280006307.01.T01:CDS 50.0%
!!! CCTCTGATTTTGAGGTGGGA+AGG - Chr2:289573-289592 None:intergenic 50.0%
AAGAACGGCGACAGACTCGT+CGG + Chr2:287820-287839 MsG0280006307.01.T01:CDS 55.0%
AAGGATGCAGGCAGGATTGC+TGG + Chr2:288250-288269 MsG0280006307.01.T01:CDS 55.0%
ACCATCATCACCAACGCCGA+AGG + Chr2:287763-287782 MsG0280006307.01.T01:CDS 55.0%
AGCAATCCTGCCTGCATCCT+TGG - Chr2:288251-288270 None:intergenic 55.0%
AGGACTGCTACCAAGGATGC+AGG + Chr2:288238-288257 MsG0280006307.01.T01:CDS 55.0%
AGGTTTGCCACCTTCCATGG+CGG - Chr2:287743-287762 None:intergenic 55.0%
ATCAGGCAAGGGAGCAGATG+GGG + Chr2:290344-290363 MsG0280006307.01.T01:CDS 55.0%
ATTAACGACGGCCTGACGCT+TGG - Chr2:287854-287873 None:intergenic 55.0%
CAGGAGGAATACCGTCCAAG+CGG - Chr2:289693-289712 None:intergenic 55.0%
CATCAGGCAAGGGAGCAGAT+GGG + Chr2:290343-290362 MsG0280006307.01.T01:CDS 55.0%
CCAAGGGCAACCACTTCATC+TGG - Chr2:289253-289272 None:intergenic 55.0%
CCAGATGAAGTGGTTGCCCT+TGG + Chr2:289250-289269 MsG0280006307.01.T01:CDS 55.0%
CTTCAATCTGCGGAACCCCA+CGG - Chr2:289720-289739 None:intergenic 55.0%
CTTCCCTGTGCCCTTGTCTA+TGG - Chr2:289785-289804 None:intergenic 55.0%
GAGACGGTGGCCGAAGAAAA+GGG - Chr2:287590-287609 None:intergenic 55.0%
GGCCCCTCAGAATCATCATC+AGG + Chr2:290327-290346 MsG0280006307.01.T01:CDS 55.0%
GGTAGGTTTGCCACCTTCCA+TGG - Chr2:287746-287765 None:intergenic 55.0%
GGTGAAAGGCTTTCTGTCGG+TGG - Chr2:287659-287678 None:intergenic 55.0%
GGTGGGAAGGGTAGTGTTTC+TGG - Chr2:289560-289579 None:intergenic 55.0%
GTAAGCAACAACGGAGGGAG+TGG - Chr2:287797-287816 None:intergenic 55.0%
TCATCAGGCAAGGGAGCAGA+TGG + Chr2:290342-290361 MsG0280006307.01.T01:CDS 55.0%
TCATCCATCCTCTCGCCAAC+CGG - Chr2:287215-287234 None:intergenic 55.0%
TGAGACGGTGGCCGAAGAAA+AGG - Chr2:287591-287610 None:intergenic 55.0%
TTCAATCTGCGGAACCCCAC+GGG - Chr2:289719-289738 None:intergenic 55.0%
TTCCTGATTGAGGGCAGCCA+TGG - Chr2:290226-290245 None:intergenic 55.0%
! ACAAATTGCCGGTTGGCGAG+AGG + Chr2:287204-287223 MsG0280006307.01.T01:five_prime_UTR 55.0%
! ATGTTTGGGGCCATCTGCTG+TGG - Chr2:288849-288868 None:intergenic 55.0%
! CAAGGGCACAGGGAAGAAAC+AGG + Chr2:289789-289808 MsG0280006307.01.T01:CDS 55.0%
! CTGCCATAGACAAGGGCACA+GGG + Chr2:289779-289798 MsG0280006307.01.T01:CDS 55.0%
! CTTGGTAGCTTCCGCTTGGA+CGG + Chr2:289679-289698 MsG0280006307.01.T01:CDS 55.0%
! GTTTTCTCCACCGCTGCTGA+TGG + Chr2:289592-289611 MsG0280006307.01.T01:CDS 55.0%
!! ACCTTCGGCGTTGGTGATGA+TGG - Chr2:287767-287786 None:intergenic 55.0%
!! TCGGCGTTGGTGATGATGGT+AGG - Chr2:287763-287782 None:intergenic 55.0%
AATTTGGGGAATGCGGCGCG+AGG - Chr2:287634-287653 None:intergenic 60.0%
ATTTGGGGAATGCGGCGCGA+GGG - Chr2:287633-287652 None:intergenic 60.0%
CGGTCAGATTGCCAAGCGTC+AGG + Chr2:287840-287859 MsG0280006307.01.T01:CDS 60.0%
CTGCATCTGCAGCTCCAGGT+TGG - Chr2:290278-290297 None:intergenic 60.0%
CTGCTACCAAGGATGCAGGC+AGG + Chr2:288242-288261 MsG0280006307.01.T01:CDS 60.0%
CTTGGGGCTGCAGTTCAGGT+CGG + Chr2:289268-289287 MsG0280006307.01.T01:intron 60.0%
GACCTGAACTGCAGCCCCAA+GGG - Chr2:289269-289288 None:intergenic 60.0%
GACGAGTCTGTCGCCGTTCT+TGG - Chr2:287821-287840 None:intergenic 60.0%
GACTCGCTACCAGGTGGTGT+AGG - Chr2:290306-290325 None:intergenic 60.0%
GCTGCCCAAATACACGGCCT+TGG + Chr2:287508-287527 MsG0280006307.01.T01:CDS 60.0%
GGGAGTGGTACGCTGACCTT+CGG - Chr2:287782-287801 None:intergenic 60.0%
GGTAGACAACAGAGTCCGCC+TGG - Chr2:290077-290096 None:intergenic 60.0%
GGTTTGTCCATCAGCAGCGG+TGG - Chr2:289602-289621 None:intergenic 60.0%
GTATTCCTCCTGCTCCCCGT+GGG + Chr2:289701-289720 MsG0280006307.01.T01:CDS 60.0%
TATTCCTCCTGCTCCCCGTG+GGG + Chr2:289702-289721 MsG0280006307.01.T01:CDS 60.0%
TCAATCTGCGGAACCCCACG+GGG - Chr2:289718-289737 None:intergenic 60.0%
TGCCATGGCTGCCCTCAATC+AGG + Chr2:290221-290240 MsG0280006307.01.T01:CDS 60.0%
! ACACCACCTGGTAGCGAGTC+TGG + Chr2:290306-290325 MsG0280006307.01.T01:CDS 60.0%
! ATTGCCGGTTGGCGAGAGGA+TGG + Chr2:287208-287227 MsG0280006307.01.T01:five_prime_UTR 60.0%
! GCTGCCATAGACAAGGGCAC+AGG + Chr2:289778-289797 MsG0280006307.01.T01:CDS 60.0%
AAATTCCGCCGTCGCCGCCA+TGG + Chr2:287726-287745 MsG0280006307.01.T01:CDS 65.0%
CCTGCTGCATCTGCAGCTCC+AGG - Chr2:290282-290301 None:intergenic 65.0%
CCTGGAGCTGCAGATGCAGC+AGG + Chr2:290279-290298 MsG0280006307.01.T01:CDS 65.0%
CGACCTGAACTGCAGCCCCA+AGG - Chr2:289270-289289 None:intergenic 65.0%
GCAGCAGGACCTACACCACC+TGG + Chr2:290294-290313 MsG0280006307.01.T01:CDS 65.0%
GGTACGCTGACCTTCGGCGT+TGG - Chr2:287776-287795 None:intergenic 65.0%
GGTATTCCTCCTGCTCCCCG+TGG + Chr2:289700-289719 MsG0280006307.01.T01:CDS 65.0%
TGCCCTTGGGGCTGCAGTTC+AGG + Chr2:289264-289283 MsG0280006307.01.T01:CDS 65.0%
ACCTTCCATGGCGGCGACGG+CGG - Chr2:287734-287753 None:intergenic 70.0%
GAATGCGGCGCGAGGGAAGG+TGG - Chr2:287626-287645 None:intergenic 70.0%
GAGGGGCCAGACTCGCTACC+AGG - Chr2:290315-290334 None:intergenic 70.0%
GCCACCTTCCATGGCGGCGA+CGG - Chr2:287737-287756 None:intergenic 70.0%
GGGCCAGACTCGCTACCAGG+TGG - Chr2:290312-290331 None:intergenic 70.0%
GCCGTCGCCGCCATGGAAGG+TGG + Chr2:287733-287752 MsG0280006307.01.T01:CDS 75.0%
GGAACCCCACGGGGAGCAGG+AGG - Chr2:289709-289728 None:intergenic 75.0%
GGGGAATGCGGCGCGAGGGA+AGG - Chr2:287629-287648 None:intergenic 75.0%
TCCGCCGTCGCCGCCATGGA+AGG + Chr2:287730-287749 MsG0280006307.01.T01:CDS 75.0%
TGCGGAACCCCACGGGGAGC+AGG - Chr2:289712-289731 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr2 gene 287191 290677 287191 ID=MsG0280006307.01;Name=MsG0280006307.01
Chr2 mRNA 287191 290677 287191 ID=MsG0280006307.01.T01;Parent=MsG0280006307.01;Name=MsG0280006307.01.T01;_AED=0.36;_eAED=0.36;_QI=302|1|1|1|1|1|7|276|706
Chr2 exon 287191 288044 287191 ID=MsG0280006307.01.T01:exon:529;Parent=MsG0280006307.01.T01
Chr2 exon 288142 288474 288142 ID=MsG0280006307.01.T01:exon:530;Parent=MsG0280006307.01.T01
Chr2 exon 288578 288720 288578 ID=MsG0280006307.01.T01:exon:531;Parent=MsG0280006307.01.T01
Chr2 exon 288829 288927 288829 ID=MsG0280006307.01.T01:exon:532;Parent=MsG0280006307.01.T01
Chr2 exon 289096 289285 289096 ID=MsG0280006307.01.T01:exon:533;Parent=MsG0280006307.01.T01
Chr2 exon 289454 289852 289454 ID=MsG0280006307.01.T01:exon:534;Parent=MsG0280006307.01.T01
Chr2 exon 289997 290677 289997 ID=MsG0280006307.01.T01:exon:535;Parent=MsG0280006307.01.T01
Chr2 five_prime_UTR 287191 287492 287191 ID=MsG0280006307.01.T01:five_prime_utr;Parent=MsG0280006307.01.T01
Chr2 CDS 287493 288044 287493 ID=MsG0280006307.01.T01:cds;Parent=MsG0280006307.01.T01
Chr2 CDS 288142 288474 288142 ID=MsG0280006307.01.T01:cds;Parent=MsG0280006307.01.T01
Chr2 CDS 288578 288720 288578 ID=MsG0280006307.01.T01:cds;Parent=MsG0280006307.01.T01
Chr2 CDS 288829 288927 288829 ID=MsG0280006307.01.T01:cds;Parent=MsG0280006307.01.T01
Chr2 CDS 289096 289285 289096 ID=MsG0280006307.01.T01:cds;Parent=MsG0280006307.01.T01
Chr2 CDS 289454 289852 289454 ID=MsG0280006307.01.T01:cds;Parent=MsG0280006307.01.T01
Chr2 CDS 289997 290401 289997 ID=MsG0280006307.01.T01:cds;Parent=MsG0280006307.01.T01
Chr2 three_prime_UTR 290402 290677 290402 ID=MsG0280006307.01.T01:three_prime_utr;Parent=MsG0280006307.01.T01
Gene Sequence

>MsG0280006307.01.T01

ATGGCTTCCTCAAGTGCTGCCCAAATACACGGCCTTGGTTTCTCCCCAATCCGAAAACCTTCTTCTTCCACTTCCAATTCTTCCTATTCCAAAACCCTTTTCTTCGGCCACCGTCTCAATTCTAATCACGCCACCTTCCCTCGCGCCGCATTCCCCAAATTATCCACCGACAGAAAGCCTTTCACCTTCCGTGTCGTCAATGAGAAAGTTGTCGGTATCGATTTGGGTACTACAAATTCCGCCGTCGCCGCCATGGAAGGTGGCAAACCTACCATCATCACCAACGCCGAAGGTCAGCGTACCACTCCCTCCGTTGTTGCTTACACCAAGAACGGCGACAGACTCGTCGGTCAGATTGCCAAGCGTCAGGCCGTCGTTAATCCCGAGAACACCTTCTTCTCTGTGAAGAGGTTCATTGGTAGGAAGATGTCTGAGGTTGACGAAGAGTCTAAACAAGTCTCTTACAGAGTCATTAGAGACGATAACGGCAACGTCAAACTCGATTGTCCAGCTATTGGAAAATCATTTGCTGCTGAAGAAATTTCTGCTCAGGTCTTGAGGAAGCTTGTAGATGATGCTTCAAAGTTTTTGAATGATAAAGTAACTAAGGCTGTAGTCACTGTGCCTGCATACTTCAATGATTCACAAAGGACTGCTACCAAGGATGCAGGCAGGATTGCTGGTCTTGAAGTTCTTCGAATTATCAATGAACCAACTGCTGCATCCTTGGCTTATGGTTTCGAAAGGAAAAACAATGAAACCATTTTGGTCTTTGACCTTGGAGGTGGTACTTTTGATGTCTCAGTGCTTGAGGTTGGTGATGGAGTGTTTGAAGTGCTCTCTACTTCTGGTGATACACACTTGGGTGGTGATGATTTTGATAAGAGAGTTGTTGATTGGTTGGCTGGAGACTTCAAGAGAGATGAAGGTATAGACCTTTTGAAGGACAAACAAGCTCTTCAGCGTCTTACCGAGACAGCTGAGAAAGCTAAAATGGAGCTTTCATCCCTCACTCAAACAAACATCAGTTTGCCGTTCATAACTGCCACAGCAGATGGCCCCAAACATATTGAGACCACTCTTACAAGGGCTAAATTTGAGGAATTATGTTCAGATCTTCTTGACAGACTCAAGACACCAGTAGAAAATTCATTGAGGGATGCAAAACTCTCAATTAAGGATATTGATGAGGTGATTCTTGTTGGTGGATCAACACGTATCCCTGCTGTTCAGGAGCTTGTAAAGAAGATGACTGGAAAAGACCCAAATGTCACTGTCAATCCAGATGAAGTGGTTGCCCTTGGGGCTGCAGTTCAGGCTGGTGTCTTGGCTGGAGATGTCAGCGACATTGTACTGTTAGATGTTTCTCCATTGTCCTTGGGTTTGGAAACTCTAGGTGGGGTGATGACAAAAATTATTCCCAGAAACACTACCCTTCCCACCTCAAAATCAGAGGTTTTCTCCACCGCTGCTGATGGACAAACCAGTGTAGAAATTAATGTCCTTCAGGGTGAGAGAGAATTTGTTAGGGACAATAAATCTCTTGGTAGCTTCCGCTTGGACGGTATTCCTCCTGCTCCCCGTGGGGTTCCGCAGATTGAAGTGAAGTTCGACATTGATGCAAATGGCATTCTGTCAGTTGCTGCCATAGACAAGGGCACAGGGAAGAAACAGGATATTACCATTACTGGTGCCAGTACCTTGCCTAGTGATGAGGTTGAGAGGATGGTCAATGAGGCTGAGAGATTTTCAAAGGAGGACAAGGAGAAGAGGGATGCAATAGACACAAAGAACCAGGCGGACTCTGTTGTCTACCAGACTGAGAAGCAATTGAAAGAGCTAGGAGAAAAGGTACCTGGCCCTGTGAAAGAAAAGGTGGAAGCAAAGCTGGTAGAGCTTAAAGATGCTATTTCTGGTGGTTCGACCCAAACTATTAAAGATGCCATGGCTGCCCTCAATCAGGAAGTTATGCAGCTTGGACAGTCTCTATATAACCAACCTGGAGCTGCAGATGCAGCAGGACCTACACCACCTGGTAGCGAGTCTGGCCCCTCAGAATCATCATCAGGCAAGGGAGCAGATGGGGATGTGATTGATGCAGATTTTACTGACTCTAAATGA

Protein sequence

>MsG0280006307.01.T01

MASSSAAQIHGLGFSPIRKPSSSTSNSSYSKTLFFGHRLNSNHATFPRAAFPKLSTDRKPFTFRVVNEKVVGIDLGTTNSAVAAMEGGKPTIITNAEGQRTTPSVVAYTKNGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDEESKQVSYRVIRDDNGNVKLDCPAIGKSFAAEEISAQVLRKLVDDASKFLNDKVTKAVVTVPAYFNDSQRTATKDAGRIAGLEVLRIINEPTAASLAYGFERKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRVVDWLAGDFKRDEGIDLLKDKQALQRLTETAEKAKMELSSLTQTNISLPFITATADGPKHIETTLTRAKFEELCSDLLDRLKTPVENSLRDAKLSIKDIDEVILVGGSTRIPAVQELVKKMTGKDPNVTVNPDEVVALGAAVQAGVLAGDVSDIVLLDVSPLSLGLETLGGVMTKIIPRNTTLPTSKSEVFSTAADGQTSVEINVLQGEREFVRDNKSLGSFRLDGIPPAPRGVPQIEVKFDIDANGILSVAAIDKGTGKKQDITITGASTLPSDEVERMVNEAERFSKEDKEKRDAIDTKNQADSVVYQTEKQLKELGEKVPGPVKEKVEAKLVELKDAISGGSTQTIKDAMAALNQEVMQLGQSLYNQPGAADAAGPTPPGSESGPSESSSGKGADGDVIDADFTDSK*