Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280006713.01.T01 | XP_003593565.1 | 98.655 | 223 | 3 | 0 | 7 | 229 | 17 | 239 | 3.12E-158 | 447 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280006713.01.T01 | O23300 | 57.658 | 222 | 90 | 3 | 7 | 227 | 17 | 235 | 1.50E-87 | 261 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280006713.01.T01 | G7IPS1 | 98.655 | 223 | 3 | 0 | 7 | 229 | 17 | 239 | 1.49e-158 | 447 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|---|---|
MsG0280006713.01 | MsG0780036946.01 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280006713.01.T01 | MTR_2g013460 | 98.655 | 223 | 3 | 0 | 7 | 229 | 17 | 239 | 3.77e-162 | 447 |
MsG0280006713.01.T01 | MTR_7g024300 | 47.321 | 224 | 110 | 3 | 7 | 229 | 17 | 233 | 1.93e-67 | 207 |
MsG0280006713.01.T01 | MTR_7g024280 | 44.712 | 208 | 104 | 3 | 7 | 210 | 16 | 216 | 4.90e-52 | 169 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280006713.01.T01 | AT4G14440 | 57.658 | 222 | 90 | 3 | 7 | 227 | 17 | 235 | 1.52e-88 | 261 |
MsG0280006713.01.T01 | AT4G14430 | 58.716 | 218 | 88 | 2 | 7 | 223 | 17 | 233 | 8.01e-79 | 237 |
MsG0280006713.01.T01 | AT1G65520 | 49.763 | 211 | 98 | 3 | 7 | 216 | 17 | 220 | 7.60e-60 | 188 |
Find 84 sgRNAs with CRISPR-Local
Find 94 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCCTCAAGCTTGTTTGGTTT+TGG | 0.145282 | 2:+5289371 | MsG0280006713.01.T01:CDS |
GTTGGGTGGGGTGAAGATTA+AGG | 0.192080 | 2:+5289203 | MsG0280006713.01.T01:CDS |
TGGTCGTCGCCGTGATTGTT+AGG | 0.292462 | 2:-5288745 | None:intergenic |
GGTTTGGATTGAGGCGGTTT+TGG | 0.311734 | 2:-5288765 | None:intergenic |
AGGAGAGATGAGATTAGGTT+TGG | 0.333744 | 2:-5288781 | None:intergenic |
ATCTTCGATACAAGTGATTT+CGG | 0.338095 | 2:-5289402 | None:intergenic |
TTTGTATCCTCAAGCTTGTT+TGG | 0.341408 | 2:+5289365 | MsG0280006713.01.T01:CDS |
GTTGAGGCTGCTTTGCGCTT+GGG | 0.341620 | 2:+5289285 | MsG0280006713.01.T01:CDS |
CGGCGACAGGTTTGAGGGAT+TGG | 0.341948 | 2:-5288960 | None:intergenic |
TAAGGGATGTGTTGTTGGGT+GGG | 0.351304 | 2:+5289190 | MsG0280006713.01.T01:CDS |
GGGGAAAGAAGCTGTGAAAC+TGG | 0.351848 | 2:+5289224 | MsG0280006713.01.T01:CDS |
TGTCGAGGAGAGATGAGATT+AGG | 0.357735 | 2:-5288786 | None:intergenic |
TTAAGTCGCCGGTGGTGTTA+AGG | 0.364094 | 2:+5289172 | MsG0280006713.01.T01:CDS |
GGTGTTAAGGGATGTGTTGT+TGG | 0.368693 | 2:+5289185 | MsG0280006713.01.T01:CDS |
GTGTTAAGGGATGTGTTGTT+GGG | 0.372301 | 2:+5289186 | MsG0280006713.01.T01:CDS |
TGTTGAGGCTGCTTTGCGCT+TGG | 0.373309 | 2:+5289284 | MsG0280006713.01.T01:CDS |
CCAACGGCTTCGACTTACTC+TGG | 0.374188 | 2:+5288884 | MsG0280006713.01.T01:CDS |
TTGGGTGGGGTGAAGATTAA+GGG | 0.384100 | 2:+5289204 | MsG0280006713.01.T01:CDS |
GGATGGAGAGGTGGCGGATC+GGG | 0.388897 | 2:-5288908 | None:intergenic |
CCGTTGATAGCGGCGATTGT+CGG | 0.411666 | 2:-5289006 | None:intergenic |
GAACCTTGGATTGCCGTTGC+CGG | 0.417964 | 2:+5289119 | MsG0280006713.01.T01:CDS |
AACGGCCACGCCTCCGCCGC+CGG | 0.422371 | 2:+5289024 | MsG0280006713.01.T01:CDS |
TAAGTCGCCGGTGGTGTTAA+GGG | 0.427284 | 2:+5289173 | MsG0280006713.01.T01:CDS |
AAGGGATGTGTTGTTGGGTG+GGG | 0.428370 | 2:+5289191 | MsG0280006713.01.T01:CDS |
TTGAGGCTGCTTTGCGCTTG+GGG | 0.433082 | 2:+5289286 | MsG0280006713.01.T01:CDS |
GACATAAGAGCTGCGGCGAC+AGG | 0.435150 | 2:-5288973 | None:intergenic |
ATGAGATTAGGTTTGGATTG+AGG | 0.446715 | 2:-5288774 | None:intergenic |
GAAACGGGTGCCGGTGGCGG+TGG | 0.446759 | 2:-5288857 | None:intergenic |
CTCTCTTCTCAATCCACTCC+CGG | 0.448198 | 2:+5288820 | MsG0280006713.01.T01:CDS |
GAAGAAACGGGTGCCGGTGG+CGG | 0.452406 | 2:-5288860 | None:intergenic |
TTAAGGGATGTGTTGTTGGG+TGG | 0.460096 | 2:+5289189 | MsG0280006713.01.T01:CDS |
AGGAGTTTGCTAAGAGGAAG+TGG | 0.484940 | 2:+5289310 | MsG0280006713.01.T01:CDS |
AGCTGCGGCGACAGGTTTGA+GGG | 0.486379 | 2:-5288965 | None:intergenic |
AGACGTTCTGTTGCGGCGGA+TGG | 0.493359 | 2:-5288925 | None:intergenic |
CGGATGGAGAGGTGGCGGAT+CGG | 0.496357 | 2:-5288909 | None:intergenic |
ATAGCGGCGATTGTCGGCAT+GGG | 0.497756 | 2:-5289000 | None:intergenic |
AACACCGCCGCAAAATAATC+CGG | 0.498400 | 2:-5289138 | None:intergenic |
GAGCTGCGGCGACAGGTTTG+AGG | 0.502167 | 2:-5288966 | None:intergenic |
GATAAGAACGGAGCCGGGAG+TGG | 0.502713 | 2:-5288833 | None:intergenic |
CGAAGCCGTTGGAGAAGAAA+CGG | 0.507734 | 2:-5288873 | None:intergenic |
TGAGGCTGCTTTGCGCTTGG+GGG | 0.507973 | 2:+5289287 | MsG0280006713.01.T01:CDS |
CCGTGATTGTTAGGATCCAT+AGG | 0.513958 | 2:-5288736 | None:intergenic |
GATAGCGGCGATTGTCGGCA+TGG | 0.518462 | 2:-5289001 | None:intergenic |
TATATGCCGGAGCTGAACCT+TGG | 0.522855 | 2:+5289105 | MsG0280006713.01.T01:CDS |
GGTGGTGATAAGAACGGAGC+CGG | 0.523192 | 2:-5288839 | None:intergenic |
CAACGGCTTCGACTTACTCT+GGG | 0.523593 | 2:+5288885 | MsG0280006713.01.T01:CDS |
TTCTGTTGCGGCGGATGGAG+AGG | 0.532006 | 2:-5288920 | None:intergenic |
GTGAAGTTTATGCTGAGATA+AGG | 0.533579 | 2:+5289337 | MsG0280006713.01.T01:CDS |
GGCACCCGTTTCTTCTCCAA+CGG | 0.545185 | 2:+5288868 | MsG0280006713.01.T01:CDS |
GGCAATCCAAGGTTCAGCTC+CGG | 0.545619 | 2:-5289111 | None:intergenic |
TGGAGAGAAGATTAAGTCGC+CGG | 0.549071 | 2:+5289161 | MsG0280006713.01.T01:CDS |
GAAGCCGTTGGAGAAGAAAC+GGG | 0.552764 | 2:-5288872 | None:intergenic |
AAAATCCGGCGGCGGAGGCG+TGG | 0.560323 | 2:-5289029 | None:intergenic |
AACAGAACGTCTTCATTCCA+TGG | 0.568913 | 2:+5288936 | MsG0280006713.01.T01:CDS |
AACACATCCCTTAACACCAC+CGG | 0.570033 | 2:-5289180 | None:intergenic |
GGAGGCGTGGCCGTTGATAG+CGG | 0.571706 | 2:-5289016 | None:intergenic |
TGCGGCGGATGGAGAGGTGG+CGG | 0.571822 | 2:-5288914 | None:intergenic |
GTTCTTATCACCACCGCCAC+CGG | 0.572962 | 2:+5288847 | MsG0280006713.01.T01:CDS |
CCGACAATCGCCGCTATCAA+CGG | 0.578322 | 2:+5289006 | MsG0280006713.01.T01:CDS |
AGAGAGATGTGAGAGTGTCG+AGG | 0.585261 | 2:-5288801 | None:intergenic |
AATCCGGCAACGGCAATCCA+AGG | 0.591403 | 2:-5289122 | None:intergenic |
GGAGAAGAAACGGGTGCCGG+TGG | 0.591921 | 2:-5288863 | None:intergenic |
GTTGGAGAAGAAACGGGTGC+CGG | 0.602219 | 2:-5288866 | None:intergenic |
CCCAAAACCAAACAAGCTTG+AGG | 0.602468 | 2:-5289372 | None:intergenic |
TGTTGCGGCGGATGGAGAGG+TGG | 0.604741 | 2:-5288917 | None:intergenic |
GGGAAAGAAGCTGTGAAACT+GGG | 0.604934 | 2:+5289225 | MsG0280006713.01.T01:CDS |
GCCGCAAAATAATCCGGCAA+CGG | 0.609747 | 2:-5289132 | None:intergenic |
GTGGTGATAAGAACGGAGCC+GGG | 0.610414 | 2:-5288838 | None:intergenic |
AGGTTTGAGGGATTGGACCA+TGG | 0.613239 | 2:-5288953 | None:intergenic |
AGATTAGGTTTGGATTGAGG+CGG | 0.613273 | 2:-5288771 | None:intergenic |
GGAATGAAGACGTTCTGTTG+CGG | 0.615137 | 2:-5288932 | None:intergenic |
CCAGAGTAAGTCGAAGCCGT+TGG | 0.617771 | 2:-5288884 | None:intergenic |
TTTGCTAAGAGGAAGTGGGC+TGG | 0.621682 | 2:+5289315 | MsG0280006713.01.T01:CDS |
TCAAGGTGTGTTGTATATGC+CGG | 0.628120 | 2:+5289092 | MsG0280006713.01.T01:CDS |
CCTATGGATCCTAACAATCA+CGG | 0.639162 | 2:+5288736 | None:intergenic |
GGAGTTTGCTAAGAGGAAGT+GGG | 0.644987 | 2:+5289311 | MsG0280006713.01.T01:CDS |
TAGCGGCGATTGTCGGCATG+GGG | 0.656064 | 2:-5288999 | None:intergenic |
GGTGGCGGTGGTGATAAGAA+CGG | 0.668134 | 2:-5288845 | None:intergenic |
GGGGAGAGACATAAGAGCTG+CGG | 0.669410 | 2:-5288980 | None:intergenic |
TGGGTGGGGTGAAGATTAAG+GGG | 0.673855 | 2:+5289205 | MsG0280006713.01.T01:CDS |
TGATTCTGCGCATGATAGCG+TGG | 0.677201 | 2:+5289254 | MsG0280006713.01.T01:CDS |
ATGAAGACGTTCTGTTGCGG+CGG | 0.686722 | 2:-5288929 | None:intergenic |
AGAGAAGATTAAGTCGCCGG+TGG | 0.702188 | 2:+5289164 | MsG0280006713.01.T01:CDS |
TAGCGTGGAGAGTACTGTTG+AGG | 0.735207 | 2:+5289269 | MsG0280006713.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
ATCTTCGATACAAGTGATTT+CGG | - | Chr2:5289405-5289424 | None:intergenic | 30.0% | |
!!! | GTCATGATTATGTTTTGATG+AGG | + | Chr2:5289064-5289083 | MsG0280006713.01.T01:CDS | 30.0% |
ACAAATAGCGAGCAAAAATC+CGG | - | Chr2:5289046-5289065 | None:intergenic | 35.0% | |
ATGAGATTAGGTTTGGATTG+AGG | - | Chr2:5288777-5288796 | None:intergenic | 35.0% | |
GTGAAGTTTATGCTGAGATA+AGG | + | Chr2:5289337-5289356 | MsG0280006713.01.T01:CDS | 35.0% | |
! | TTTGTATCCTCAAGCTTGTT+TGG | + | Chr2:5289365-5289384 | MsG0280006713.01.T01:CDS | 35.0% |
AACAGAACGTCTTCATTCCA+TGG | + | Chr2:5288936-5288955 | MsG0280006713.01.T01:CDS | 40.0% | |
AGATTAGGTTTGGATTGAGG+CGG | - | Chr2:5288774-5288793 | None:intergenic | 40.0% | |
AGGAGAGATGAGATTAGGTT+TGG | - | Chr2:5288784-5288803 | None:intergenic | 40.0% | |
TCAAGGTGTGTTGTATATGC+CGG | + | Chr2:5289092-5289111 | MsG0280006713.01.T01:CDS | 40.0% | |
! | GTGTTAAGGGATGTGTTGTT+GGG | + | Chr2:5289186-5289205 | MsG0280006713.01.T01:CDS | 40.0% |
!! | GTTTTGATGAGGAGTGATCA+AGG | + | Chr2:5289075-5289094 | MsG0280006713.01.T01:CDS | 40.0% |
!! | TCCTCAAGCTTGTTTGGTTT+TGG | + | Chr2:5289371-5289390 | MsG0280006713.01.T01:CDS | 40.0% |
!!! | CCTCAAGCTTGTTTGGTTTT+GGG | + | Chr2:5289372-5289391 | MsG0280006713.01.T01:CDS | 40.0% |
AACACATCCCTTAACACCAC+CGG | - | Chr2:5289183-5289202 | None:intergenic | 45.0% | |
AACACCGCCGCAAAATAATC+CGG | - | Chr2:5289141-5289160 | None:intergenic | 45.0% | |
AATAGCGAGCAAAAATCCGG+CGG | - | Chr2:5289043-5289062 | None:intergenic | 45.0% | |
CCCAAAACCAAACAAGCTTG+AGG | - | Chr2:5289375-5289394 | None:intergenic | 45.0% | |
GGAATGAAGACGTTCTGTTG+CGG | - | Chr2:5288935-5288954 | None:intergenic | 45.0% | |
GGGAAAGAAGCTGTGAAACT+GGG | + | Chr2:5289225-5289244 | MsG0280006713.01.T01:CDS | 45.0% | |
GGTGTTAAGGGATGTGTTGT+TGG | + | Chr2:5289185-5289204 | MsG0280006713.01.T01:CDS | 45.0% | |
TGGAGAGAAGATTAAGTCGC+CGG | + | Chr2:5289161-5289180 | MsG0280006713.01.T01:CDS | 45.0% | |
TGTCGAGGAGAGATGAGATT+AGG | - | Chr2:5288789-5288808 | None:intergenic | 45.0% | |
TTGGGTGGGGTGAAGATTAA+GGG | + | Chr2:5289204-5289223 | MsG0280006713.01.T01:CDS | 45.0% | |
! | TAAGGGATGTGTTGTTGGGT+GGG | + | Chr2:5289190-5289209 | MsG0280006713.01.T01:CDS | 45.0% |
! | TTAAGGGATGTGTTGTTGGG+TGG | + | Chr2:5289189-5289208 | MsG0280006713.01.T01:CDS | 45.0% |
!! | AGGAGTTTGCTAAGAGGAAG+TGG | + | Chr2:5289310-5289329 | MsG0280006713.01.T01:CDS | 45.0% |
!! | GATTATTTTGCGGCGGTGTT+TGG | + | Chr2:5289141-5289160 | MsG0280006713.01.T01:CDS | 45.0% |
!! | GGAGTTTGCTAAGAGGAAGT+GGG | + | Chr2:5289311-5289330 | MsG0280006713.01.T01:CDS | 45.0% |
AGAGAAGATTAAGTCGCCGG+TGG | + | Chr2:5289164-5289183 | MsG0280006713.01.T01:CDS | 50.0% | |
AGGTTTGAGGGATTGGACCA+TGG | - | Chr2:5288956-5288975 | None:intergenic | 50.0% | |
ATGAAGACGTTCTGTTGCGG+CGG | - | Chr2:5288932-5288951 | None:intergenic | 50.0% | |
CAACGGCTTCGACTTACTCT+GGG | + | Chr2:5288885-5288904 | MsG0280006713.01.T01:CDS | 50.0% | |
CGAAGCCGTTGGAGAAGAAA+CGG | - | Chr2:5288876-5288895 | None:intergenic | 50.0% | |
CTCTCTTCTCAATCCACTCC+CGG | + | Chr2:5288820-5288839 | MsG0280006713.01.T01:CDS | 50.0% | |
GAAGCCGTTGGAGAAGAAAC+GGG | - | Chr2:5288875-5288894 | None:intergenic | 50.0% | |
GCCGCAAAATAATCCGGCAA+CGG | - | Chr2:5289135-5289154 | None:intergenic | 50.0% | |
GGGGAAAGAAGCTGTGAAAC+TGG | + | Chr2:5289224-5289243 | MsG0280006713.01.T01:CDS | 50.0% | |
GTTGGGTGGGGTGAAGATTA+AGG | + | Chr2:5289203-5289222 | MsG0280006713.01.T01:CDS | 50.0% | |
TATATGCCGGAGCTGAACCT+TGG | + | Chr2:5289105-5289124 | MsG0280006713.01.T01:CDS | 50.0% | |
TGGGTGGGGTGAAGATTAAG+GGG | + | Chr2:5289205-5289224 | MsG0280006713.01.T01:CDS | 50.0% | |
TTTGCTAAGAGGAAGTGGGC+TGG | + | Chr2:5289315-5289334 | MsG0280006713.01.T01:CDS | 50.0% | |
! | AAGGGATGTGTTGTTGGGTG+GGG | + | Chr2:5289191-5289210 | MsG0280006713.01.T01:CDS | 50.0% |
! | GGTTTGGATTGAGGCGGTTT+TGG | - | Chr2:5288768-5288787 | None:intergenic | 50.0% |
! | TAAGTCGCCGGTGGTGTTAA+GGG | + | Chr2:5289173-5289192 | MsG0280006713.01.T01:CDS | 50.0% |
! | TGATTCTGCGCATGATAGCG+TGG | + | Chr2:5289254-5289273 | MsG0280006713.01.T01:CDS | 50.0% |
! | TTAAGTCGCCGGTGGTGTTA+AGG | + | Chr2:5289172-5289191 | MsG0280006713.01.T01:CDS | 50.0% |
!! | AGAGAGATGTGAGAGTGTCG+AGG | - | Chr2:5288804-5288823 | None:intergenic | 50.0% |
!! | GCCGTTGCCGGATTATTTTG+CGG | + | Chr2:5289131-5289150 | MsG0280006713.01.T01:CDS | 50.0% |
!! | GTTGCCGGATTATTTTGCGG+CGG | + | Chr2:5289134-5289153 | MsG0280006713.01.T01:CDS | 50.0% |
!! | TAGCGTGGAGAGTACTGTTG+AGG | + | Chr2:5289269-5289288 | MsG0280006713.01.T01:CDS | 50.0% |
AATCCGGCAACGGCAATCCA+AGG | - | Chr2:5289125-5289144 | None:intergenic | 55.0% | |
ATAGCGGCGATTGTCGGCAT+GGG | - | Chr2:5289003-5289022 | None:intergenic | 55.0% | |
CCAACGGCTTCGACTTACTC+TGG | + | Chr2:5288884-5288903 | MsG0280006713.01.T01:CDS | 55.0% | |
CCAGAGTAAGTCGAAGCCGT+TGG | - | Chr2:5288887-5288906 | None:intergenic | 55.0% | |
CCGACAATCGCCGCTATCAA+CGG | + | Chr2:5289006-5289025 | MsG0280006713.01.T01:CDS | 55.0% | |
GAACCTTGGATTGCCGTTGC+CGG | + | Chr2:5289119-5289138 | MsG0280006713.01.T01:CDS | 55.0% | |
GGCAATCCAAGGTTCAGCTC+CGG | - | Chr2:5289114-5289133 | None:intergenic | 55.0% | |
GGCACCCGTTTCTTCTCCAA+CGG | + | Chr2:5288868-5288887 | MsG0280006713.01.T01:CDS | 55.0% | |
GGGGAGAGACATAAGAGCTG+CGG | - | Chr2:5288983-5289002 | None:intergenic | 55.0% | |
GGTGGTGATAAGAACGGAGC+CGG | - | Chr2:5288842-5288861 | None:intergenic | 55.0% | |
GTGGTGATAAGAACGGAGCC+GGG | - | Chr2:5288841-5288860 | None:intergenic | 55.0% | |
GTTCTTATCACCACCGCCAC+CGG | + | Chr2:5288847-5288866 | MsG0280006713.01.T01:CDS | 55.0% | |
GTTGGAGAAGAAACGGGTGC+CGG | - | Chr2:5288869-5288888 | None:intergenic | 55.0% | |
TGGTCGTCGCCGTGATTGTT+AGG | - | Chr2:5288748-5288767 | None:intergenic | 55.0% | |
! | GGTGGCGGTGGTGATAAGAA+CGG | - | Chr2:5288848-5288867 | None:intergenic | 55.0% |
! | GTTGAGGCTGCTTTGCGCTT+GGG | + | Chr2:5289285-5289304 | MsG0280006713.01.T01:CDS | 55.0% |
! | TGTTGAGGCTGCTTTGCGCT+TGG | + | Chr2:5289284-5289303 | MsG0280006713.01.T01:CDS | 55.0% |
! | TTGAGGCTGCTTTGCGCTTG+GGG | + | Chr2:5289286-5289305 | MsG0280006713.01.T01:CDS | 55.0% |
!! | CCGTTGATAGCGGCGATTGT+CGG | - | Chr2:5289009-5289028 | None:intergenic | 55.0% |
!! | TGGGGGAGGAGTTTGCTAAG+AGG | + | Chr2:5289304-5289323 | MsG0280006713.01.T01:CDS | 55.0% |
AGACGTTCTGTTGCGGCGGA+TGG | - | Chr2:5288928-5288947 | None:intergenic | 60.0% | |
AGCGAGCAAAAATCCGGCGG+CGG | - | Chr2:5289040-5289059 | None:intergenic | 60.0% | |
AGCTGCGGCGACAGGTTTGA+GGG | - | Chr2:5288968-5288987 | None:intergenic | 60.0% | |
CGGCGACAGGTTTGAGGGAT+TGG | - | Chr2:5288963-5288982 | None:intergenic | 60.0% | |
GACATAAGAGCTGCGGCGAC+AGG | - | Chr2:5288976-5288995 | None:intergenic | 60.0% | |
GATAAGAACGGAGCCGGGAG+TGG | - | Chr2:5288836-5288855 | None:intergenic | 60.0% | |
TAGCGGCGATTGTCGGCATG+GGG | - | Chr2:5289002-5289021 | None:intergenic | 60.0% | |
TTCTGTTGCGGCGGATGGAG+AGG | - | Chr2:5288923-5288942 | None:intergenic | 60.0% | |
! | GATAGCGGCGATTGTCGGCA+TGG | - | Chr2:5289004-5289023 | None:intergenic | 60.0% |
! | TGAGGCTGCTTTGCGCTTGG+GGG | + | Chr2:5289287-5289306 | MsG0280006713.01.T01:CDS | 60.0% |
GAGCAAAAATCCGGCGGCGG+AGG | - | Chr2:5289037-5289056 | None:intergenic | 65.0% | |
GAGCTGCGGCGACAGGTTTG+AGG | - | Chr2:5288969-5288988 | None:intergenic | 65.0% | |
TGTTGCGGCGGATGGAGAGG+TGG | - | Chr2:5288920-5288939 | None:intergenic | 65.0% | |
! | GGAGGCGTGGCCGTTGATAG+CGG | - | Chr2:5289019-5289038 | None:intergenic | 65.0% |
!! | CGGATGGAGAGGTGGCGGAT+CGG | - | Chr2:5288912-5288931 | None:intergenic | 65.0% |
!! | GAAGAAACGGGTGCCGGTGG+CGG | - | Chr2:5288863-5288882 | None:intergenic | 65.0% |
!! | GGAGAAGAAACGGGTGCCGG+TGG | - | Chr2:5288866-5288885 | None:intergenic | 65.0% |
!! | GGATGGAGAGGTGGCGGATC+GGG | - | Chr2:5288911-5288930 | None:intergenic | 65.0% |
AAAATCCGGCGGCGGAGGCG+TGG | - | Chr2:5289032-5289051 | None:intergenic | 70.0% | |
TGCGGCGGATGGAGAGGTGG+CGG | - | Chr2:5288917-5288936 | None:intergenic | 70.0% | |
! | GGCTGCTTTGCGCTTGGGGG+AGG | + | Chr2:5289290-5289309 | MsG0280006713.01.T01:CDS | 70.0% |
!! | GAAACGGGTGCCGGTGGCGG+TGG | - | Chr2:5288860-5288879 | None:intergenic | 75.0% |
! | AACGGCCACGCCTCCGCCGC+CGG | + | Chr2:5289024-5289043 | MsG0280006713.01.T01:CDS | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr2 | gene | 5288739 | 5289428 | 5288739 | ID=MsG0280006713.01;Name=MsG0280006713.01 |
Chr2 | mRNA | 5288739 | 5289428 | 5288739 | ID=MsG0280006713.01.T01;Parent=MsG0280006713.01;Name=MsG0280006713.01.T01;_AED=0.35;_eAED=0.35;_QI=0|-1|0|1|-1|1|1|0|229 |
Chr2 | exon | 5288739 | 5289428 | 5288739 | ID=MsG0280006713.01.T01:exon:2092;Parent=MsG0280006713.01.T01 |
Chr2 | CDS | 5288739 | 5289428 | 5288739 | ID=MsG0280006713.01.T01:cds;Parent=MsG0280006713.01.T01 |
Gene Sequence |
Protein sequence |