Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036946.01.T01 | XP_003621860.1 | 96.996 | 233 | 7 | 0 | 1 | 233 | 1 | 233 | 2.83E-164 | 463 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036946.01.T01 | O04469 | 60.274 | 219 | 86 | 1 | 1 | 218 | 1 | 219 | 9.15E-94 | 277 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036946.01.T01 | G7KWT9 | 96.996 | 233 | 7 | 0 | 1 | 233 | 1 | 233 | 1.35e-164 | 463 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180003240.01 | MsG0780036946.01 | 0.815095 | 1.101643e-51 | 7.523844e-49 |
| MsG0580025683.01 | MsG0780036946.01 | 0.806276 | 8.896773e-50 | 4.809204e-47 |
| MsG0280008117.01 | MsG0780036946.01 | 0.823632 | 1.247371e-53 | 1.080002e-50 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0280006713.01 | MsG0780036946.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036946.01.T01 | MTR_7g024300 | 96.996 | 233 | 7 | 0 | 1 | 233 | 1 | 233 | 3.43e-168 | 463 |
| MsG0780036946.01.T01 | MTR_7g024280 | 79.736 | 227 | 41 | 2 | 1 | 223 | 1 | 226 | 4.01e-124 | 352 |
| MsG0780036946.01.T01 | MTR_2g013460 | 48.750 | 240 | 115 | 3 | 1 | 233 | 1 | 239 | 2.19e-72 | 221 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036946.01.T01 | AT1G65520 | 60.274 | 219 | 86 | 1 | 1 | 218 | 1 | 219 | 9.33e-95 | 277 |
| MsG0780036946.01.T01 | AT4G14440 | 49.576 | 236 | 113 | 3 | 1 | 231 | 1 | 235 | 3.67e-77 | 233 |
| MsG0780036946.01.T01 | AT4G14430 | 51.316 | 228 | 101 | 3 | 1 | 218 | 1 | 228 | 4.62e-65 | 202 |
Find 77 sgRNAs with CRISPR-Local
Find 80 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTTAAGGCTGCGGTTGAAT+TGG | 0.323596 | 7:+17001837 | MsG0780036946.01.T01:CDS |
| GGCGAAGGAGGCGGTGAGAT+TGG | 0.327901 | 7:+17001777 | MsG0780036946.01.T01:CDS |
| GCGAAGGAGGCGGTGAGATT+GGG | 0.341668 | 7:+17001778 | MsG0780036946.01.T01:CDS |
| CATCGTTGCCGGTTAGTGTT+AGG | 0.344736 | 7:-17001318 | None:intergenic |
| GAGAAGGTGTTCATCGTTGC+CGG | 0.369830 | 7:-17001329 | None:intergenic |
| TGACATTGATCATGTGATTC+CGG | 0.384546 | 7:+17001672 | MsG0780036946.01.T01:CDS |
| ATCTTTATCCTAACACTAAC+CGG | 0.403226 | 7:+17001310 | MsG0780036946.01.T01:CDS |
| GTTAAGGCTGCGGTTGAATT+GGG | 0.413938 | 7:+17001838 | MsG0780036946.01.T01:CDS |
| TGTCATGTGGTTAAGGCTGT+TGG | 0.423767 | 7:+17001925 | MsG0780036946.01.T01:CDS |
| GGTTGAATTGGGTGGTGATT+TGG | 0.435908 | 7:+17001849 | MsG0780036946.01.T01:CDS |
| ACCTGCGGCGGAGGCGTGAC+CGG | 0.441572 | 7:-17001578 | None:intergenic |
| ACCGGTCACGCCTCCGCCGC+AGG | 0.460516 | 7:+17001577 | MsG0780036946.01.T01:CDS |
| TAGCGTTGAGGAAACGGTTA+AGG | 0.475993 | 7:+17001822 | MsG0780036946.01.T01:CDS |
| GCATGATAGCGTTGAGGAAA+CGG | 0.485014 | 7:+17001816 | MsG0780036946.01.T01:CDS |
| TGTGATGAGGACGGAGGAGG+TGG | 0.486253 | 7:-17001410 | None:intergenic |
| CATAGGAAGAGAAATGAGTT+CGG | 0.489925 | 7:-17001536 | None:intergenic |
| GAGGAGGAAGATTGTGATGC+AGG | 0.494034 | 7:+17001741 | MsG0780036946.01.T01:CDS |
| TTGATTGAATTGAGAAGTGT+GGG | 0.494586 | 7:-17001355 | None:intergenic |
| GATTGTGATGCAGGCGGCGA+AGG | 0.500935 | 7:+17001750 | MsG0780036946.01.T01:CDS |
| GATGAGGACGGAGGAGGTGG+TGG | 0.512390 | 7:-17001407 | None:intergenic |
| CTTGTTGACGGACACGGTGG+AGG | 0.515031 | 7:-17001384 | None:intergenic |
| GAAGGTGACGGCGAAGGAGG+CGG | 0.522620 | 7:+17001768 | MsG0780036946.01.T01:CDS |
| CCTACCATCGCCGCTGTCAC+CGG | 0.529761 | 7:+17001559 | MsG0780036946.01.T01:CDS |
| TGAGGAAACGGTTAAGGCTG+CGG | 0.530694 | 7:+17001828 | MsG0780036946.01.T01:CDS |
| CGAAGGAGGCGGTGAGATTG+GGG | 0.532153 | 7:+17001779 | MsG0780036946.01.T01:CDS |
| AGGAGGTGGTGGCTTGTTGA+CGG | 0.534669 | 7:-17001396 | None:intergenic |
| GGCGAAGGTGACGGCGAAGG+AGG | 0.537538 | 7:+17001765 | MsG0780036946.01.T01:CDS |
| TTGTTGACGGACACGGTGGA+GGG | 0.539713 | 7:-17001383 | None:intergenic |
| GAGATTGGGGATTGTTGACT+CGG | 0.544829 | 7:+17001792 | MsG0780036946.01.T01:CDS |
| CCAACGGCTACGACATCGAC+TGG | 0.545373 | 7:+17001455 | MsG0780036946.01.T01:CDS |
| GACACGTGTATGCTGAGAAT+AGG | 0.547375 | 7:+17001890 | MsG0780036946.01.T01:CDS |
| GAGGATGTAACCTGCGGCGG+AGG | 0.551154 | 7:-17001587 | None:intergenic |
| GATGCAGGCGGCGAAGGTGA+CGG | 0.558544 | 7:+17001756 | MsG0780036946.01.T01:CDS |
| CCGGTGACAGCGGCGATGGT+AGG | 0.559630 | 7:-17001559 | None:intergenic |
| TGAGAAGTGTGGGGTTGAGA+AGG | 0.560081 | 7:-17001345 | None:intergenic |
| TTGGTGAAACGTGGATGGAA+TGG | 0.560238 | 7:+17001868 | MsG0780036946.01.T01:CDS |
| GCGATTGTTGATGCGAAGGT+TGG | 0.567353 | 7:+17001706 | MsG0780036946.01.T01:CDS |
| TTTGATTGAATTGAGAAGTG+TGG | 0.568432 | 7:-17001356 | None:intergenic |
| ATGTGCAGTTTAGAGAAGAA+AGG | 0.573237 | 7:+17001283 | MsG0780036946.01.T01:CDS |
| AGAAATGAGTTCGGAGACGA+CGG | 0.573351 | 7:-17001527 | None:intergenic |
| TGAGTTCGGAGACGACGGAA+CGG | 0.575907 | 7:-17001522 | None:intergenic |
| GTGACCGGTGACAGCGGCGA+TGG | 0.580314 | 7:-17001563 | None:intergenic |
| GGCGGCGAAGGTGACGGCGA+AGG | 0.585170 | 7:+17001762 | MsG0780036946.01.T01:CDS |
| AAGGCTGCGGTTGAATTGGG+TGG | 0.589144 | 7:+17001841 | MsG0780036946.01.T01:CDS |
| TGCCGTGTGCGGTTGTGATG+AGG | 0.590140 | 7:-17001423 | None:intergenic |
| TGGTGGCTTGTTGACGGACA+CGG | 0.593982 | 7:-17001390 | None:intergenic |
| GGTGGTGATTTGGTGAAACG+TGG | 0.600174 | 7:+17001859 | MsG0780036946.01.T01:CDS |
| CCAGTCGATGTCGTAGCCGT+TGG | 0.601164 | 7:-17001455 | None:intergenic |
| GTCCTCATCACAACCGCACA+CGG | 0.601280 | 7:+17001421 | MsG0780036946.01.T01:CDS |
| TTGACGGACACGGTGGAGGG+CGG | 0.603626 | 7:-17001380 | None:intergenic |
| TGTTGCGATTGTTGATGCGA+AGG | 0.611424 | 7:+17001702 | MsG0780036946.01.T01:CDS |
| GGTTGTGATGAGGACGGAGG+AGG | 0.613000 | 7:-17001413 | None:intergenic |
| GGAGAAGAATTTGCCGTGTG+CGG | 0.613622 | 7:-17001434 | None:intergenic |
| GTGATTTGGTGAAACGTGGA+TGG | 0.616384 | 7:+17001863 | MsG0780036946.01.T01:CDS |
| ACAGCGGCGATGGTAGGCAT+AGG | 0.616579 | 7:-17001553 | None:intergenic |
| CAACGGCTACGACATCGACT+GGG | 0.618261 | 7:+17001456 | MsG0780036946.01.T01:CDS |
| CTGTTGGAGATATTAGTGAG+AGG | 0.626461 | 7:+17001941 | MsG0780036946.01.T01:CDS |
| AGGTTGGTGATGCGGCGGCG+AGG | 0.632976 | 7:+17001722 | MsG0780036946.01.T01:CDS |
| TTGGTGATGCGGCGGCGAGG+AGG | 0.634628 | 7:+17001725 | MsG0780036946.01.T01:CDS |
| TGATGCGAAGGTTGGTGATG+CGG | 0.635776 | 7:+17001714 | MsG0780036946.01.T01:CDS |
| TGCGAGGATGTAACCTGCGG+CGG | 0.635893 | 7:-17001590 | None:intergenic |
| GGAGGCGTGACCGGTGACAG+CGG | 0.649696 | 7:-17001569 | None:intergenic |
| CACGGCAAATTCTTCTCCAA+CGG | 0.650454 | 7:+17001439 | MsG0780036946.01.T01:CDS |
| CATGTAGAGAAATCCACGAT+CGG | 0.652552 | 7:-17001641 | None:intergenic |
| AACGGAGGAGATCGTCGATG+AGG | 0.661003 | 7:-17001504 | None:intergenic |
| TTGATCATGTGATTCCGGCG+TGG | 0.665310 | 7:+17001677 | MsG0780036946.01.T01:CDS |
| TGCGAAGGTTGGTGATGCGG+CGG | 0.665575 | 7:+17001717 | MsG0780036946.01.T01:CDS |
| GAGGAAGATTGTGATGCAGG+CGG | 0.666170 | 7:+17001744 | MsG0780036946.01.T01:CDS |
| CTCGGCGCATGATAGCGTTG+AGG | 0.673294 | 7:+17001810 | MsG0780036946.01.T01:CDS |
| CATAGTCGTGAGATAATGCG+AGG | 0.673407 | 7:-17001606 | None:intergenic |
| GTTCGGAGACGACGGAACGG+AGG | 0.680699 | 7:-17001519 | None:intergenic |
| TGATTGAATTGAGAAGTGTG+GGG | 0.704818 | 7:-17001354 | None:intergenic |
| TGGCTTGTTGACGGACACGG+TGG | 0.713580 | 7:-17001387 | None:intergenic |
| TAATGCGAGGATGTAACCTG+CGG | 0.724825 | 7:-17001593 | None:intergenic |
| GTGTGCGGTTGTGATGAGGA+CGG | 0.730224 | 7:-17001419 | None:intergenic |
| ACAATCGCAACAAACCACGC+CGG | 0.732102 | 7:-17001691 | None:intergenic |
| TGCGGTTGTGATGAGGACGG+AGG | 0.757505 | 7:-17001416 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ATCTTTATCCTAACACTAAC+CGG | + | Chr7:17001310-17001329 | MsG0780036946.01.T01:CDS | 30.0% | |
| TTTGATTGAATTGAGAAGTG+TGG | - | Chr7:17001359-17001378 | None:intergenic | 30.0% | |
| ! | TTGATTGAATTGAGAAGTGT+GGG | - | Chr7:17001358-17001377 | None:intergenic | 30.0% |
| ATGTGCAGTTTAGAGAAGAA+AGG | + | Chr7:17001283-17001302 | MsG0780036946.01.T01:CDS | 35.0% | |
| CATAGGAAGAGAAATGAGTT+CGG | - | Chr7:17001539-17001558 | None:intergenic | 35.0% | |
| TGACATTGATCATGTGATTC+CGG | + | Chr7:17001672-17001691 | MsG0780036946.01.T01:CDS | 35.0% | |
| ! | GAAGAAGTTTTTGTGTCATG+TGG | + | Chr7:17001912-17001931 | MsG0780036946.01.T01:CDS | 35.0% |
| ! | GTTTTTGTGTCATGTGGTTA+AGG | + | Chr7:17001918-17001937 | MsG0780036946.01.T01:CDS | 35.0% |
| ! | TGATTGAATTGAGAAGTGTG+GGG | - | Chr7:17001357-17001376 | None:intergenic | 35.0% |
| CATGTAGAGAAATCCACGAT+CGG | - | Chr7:17001644-17001663 | None:intergenic | 40.0% | |
| CTGTTGGAGATATTAGTGAG+AGG | + | Chr7:17001941-17001960 | MsG0780036946.01.T01:CDS | 40.0% | |
| AGAAATGAGTTCGGAGACGA+CGG | - | Chr7:17001530-17001549 | None:intergenic | 45.0% | |
| CACGGCAAATTCTTCTCCAA+CGG | + | Chr7:17001439-17001458 | MsG0780036946.01.T01:CDS | 45.0% | |
| CATAGTCGTGAGATAATGCG+AGG | - | Chr7:17001609-17001628 | None:intergenic | 45.0% | |
| GACACGTGTATGCTGAGAAT+AGG | + | Chr7:17001890-17001909 | MsG0780036946.01.T01:CDS | 45.0% | |
| GGTTGAATTGGGTGGTGATT+TGG | + | Chr7:17001849-17001868 | MsG0780036946.01.T01:CDS | 45.0% | |
| GTTAAGGCTGCGGTTGAATT+GGG | + | Chr7:17001838-17001857 | MsG0780036946.01.T01:CDS | 45.0% | |
| TAATGCGAGGATGTAACCTG+CGG | - | Chr7:17001596-17001615 | None:intergenic | 45.0% | |
| TGTCATGTGGTTAAGGCTGT+TGG | + | Chr7:17001925-17001944 | MsG0780036946.01.T01:CDS | 45.0% | |
| TGTTGCGATTGTTGATGCGA+AGG | + | Chr7:17001702-17001721 | MsG0780036946.01.T01:CDS | 45.0% | |
| TTGGTGAAACGTGGATGGAA+TGG | + | Chr7:17001868-17001887 | MsG0780036946.01.T01:CDS | 45.0% | |
| ! | GAGATTGGGGATTGTTGACT+CGG | + | Chr7:17001792-17001811 | MsG0780036946.01.T01:CDS | 45.0% |
| ! | GCATGATAGCGTTGAGGAAA+CGG | + | Chr7:17001816-17001835 | MsG0780036946.01.T01:CDS | 45.0% |
| ! | TAGCGTTGAGGAAACGGTTA+AGG | + | Chr7:17001822-17001841 | MsG0780036946.01.T01:CDS | 45.0% |
| !! | GTGATTTGGTGAAACGTGGA+TGG | + | Chr7:17001863-17001882 | MsG0780036946.01.T01:CDS | 45.0% |
| !! | GTTTTAATGCGATCCGATCG+TGG | + | Chr7:17001628-17001647 | MsG0780036946.01.T01:CDS | 45.0% |
| ACAATCGCAACAAACCACGC+CGG | - | Chr7:17001694-17001713 | None:intergenic | 50.0% | |
| GAGGAAGATTGTGATGCAGG+CGG | + | Chr7:17001744-17001763 | MsG0780036946.01.T01:CDS | 50.0% | |
| GAGGAGGAAGATTGTGATGC+AGG | + | Chr7:17001741-17001760 | MsG0780036946.01.T01:CDS | 50.0% | |
| GCGATTGTTGATGCGAAGGT+TGG | + | Chr7:17001706-17001725 | MsG0780036946.01.T01:CDS | 50.0% | |
| GGAGAAGAATTTGCCGTGTG+CGG | - | Chr7:17001437-17001456 | None:intergenic | 50.0% | |
| GGTTAAGGCTGCGGTTGAAT+TGG | + | Chr7:17001837-17001856 | MsG0780036946.01.T01:CDS | 50.0% | |
| TGAGGAAACGGTTAAGGCTG+CGG | + | Chr7:17001828-17001847 | MsG0780036946.01.T01:CDS | 50.0% | |
| TTGATCATGTGATTCCGGCG+TGG | + | Chr7:17001677-17001696 | MsG0780036946.01.T01:CDS | 50.0% | |
| ! | CATCGTTGCCGGTTAGTGTT+AGG | - | Chr7:17001321-17001340 | None:intergenic | 50.0% |
| ! | TGAGAAGTGTGGGGTTGAGA+AGG | - | Chr7:17001348-17001367 | None:intergenic | 50.0% |
| !! | GAGAAGGTGTTCATCGTTGC+CGG | - | Chr7:17001332-17001351 | None:intergenic | 50.0% |
| !! | GGTGGTGATTTGGTGAAACG+TGG | + | Chr7:17001859-17001878 | MsG0780036946.01.T01:CDS | 50.0% |
| !! | TGATGCGAAGGTTGGTGATG+CGG | + | Chr7:17001714-17001733 | MsG0780036946.01.T01:CDS | 50.0% |
| AACGGAGGAGATCGTCGATG+AGG | - | Chr7:17001507-17001526 | None:intergenic | 55.0% | |
| AAGGCTGCGGTTGAATTGGG+TGG | + | Chr7:17001841-17001860 | MsG0780036946.01.T01:CDS | 55.0% | |
| GTCCTCATCACAACCGCACA+CGG | + | Chr7:17001421-17001440 | MsG0780036946.01.T01:CDS | 55.0% | |
| GTGTGCGGTTGTGATGAGGA+CGG | - | Chr7:17001422-17001441 | None:intergenic | 55.0% | |
| TGAGTTCGGAGACGACGGAA+CGG | - | Chr7:17001525-17001544 | None:intergenic | 55.0% | |
| ! | CAACGGCTACGACATCGACT+GGG | + | Chr7:17001456-17001475 | MsG0780036946.01.T01:CDS | 55.0% |
| ! | TTGTTGACGGACACGGTGGA+GGG | - | Chr7:17001386-17001405 | None:intergenic | 55.0% |
| !! | AGGAGGTGGTGGCTTGTTGA+CGG | - | Chr7:17001399-17001418 | None:intergenic | 55.0% |
| !! | TGGTGGCTTGTTGACGGACA+CGG | - | Chr7:17001393-17001412 | None:intergenic | 55.0% |
| ACAGCGGCGATGGTAGGCAT+AGG | - | Chr7:17001556-17001575 | None:intergenic | 60.0% | |
| CCAACGGCTACGACATCGAC+TGG | + | Chr7:17001455-17001474 | MsG0780036946.01.T01:CDS | 60.0% | |
| CCAGTCGATGTCGTAGCCGT+TGG | - | Chr7:17001458-17001477 | None:intergenic | 60.0% | |
| CGAAGGAGGCGGTGAGATTG+GGG | + | Chr7:17001779-17001798 | MsG0780036946.01.T01:CDS | 60.0% | |
| GATTGTGATGCAGGCGGCGA+AGG | + | Chr7:17001750-17001769 | MsG0780036946.01.T01:CDS | 60.0% | |
| GCGAAGGAGGCGGTGAGATT+GGG | + | Chr7:17001778-17001797 | MsG0780036946.01.T01:CDS | 60.0% | |
| GGTTGTGATGAGGACGGAGG+AGG | - | Chr7:17001416-17001435 | None:intergenic | 60.0% | |
| TGCCGTGTGCGGTTGTGATG+AGG | - | Chr7:17001426-17001445 | None:intergenic | 60.0% | |
| TGCGAGGATGTAACCTGCGG+CGG | - | Chr7:17001593-17001612 | None:intergenic | 60.0% | |
| TGCGGTTGTGATGAGGACGG+AGG | - | Chr7:17001419-17001438 | None:intergenic | 60.0% | |
| TGTGATGAGGACGGAGGAGG+TGG | - | Chr7:17001413-17001432 | None:intergenic | 60.0% | |
| ! | CTCGGCGCATGATAGCGTTG+AGG | + | Chr7:17001810-17001829 | MsG0780036946.01.T01:CDS | 60.0% |
| ! | CTTGTTGACGGACACGGTGG+AGG | - | Chr7:17001387-17001406 | None:intergenic | 60.0% |
| !! | TGCGAAGGTTGGTGATGCGG+CGG | + | Chr7:17001717-17001736 | MsG0780036946.01.T01:CDS | 60.0% |
| !! | TGGCTTGTTGACGGACACGG+TGG | - | Chr7:17001390-17001409 | None:intergenic | 60.0% |
| CCTACCATCGCCGCTGTCAC+CGG | + | Chr7:17001559-17001578 | MsG0780036946.01.T01:CDS | 65.0% | |
| GAGGATGTAACCTGCGGCGG+AGG | - | Chr7:17001590-17001609 | None:intergenic | 65.0% | |
| GATGAGGACGGAGGAGGTGG+TGG | - | Chr7:17001410-17001429 | None:intergenic | 65.0% | |
| GATGCAGGCGGCGAAGGTGA+CGG | + | Chr7:17001756-17001775 | MsG0780036946.01.T01:CDS | 65.0% | |
| GGCGAAGGAGGCGGTGAGAT+TGG | + | Chr7:17001777-17001796 | MsG0780036946.01.T01:CDS | 65.0% | |
| GTTCGGAGACGACGGAACGG+AGG | - | Chr7:17001522-17001541 | None:intergenic | 65.0% | |
| ! | GAAGGTGACGGCGAAGGAGG+CGG | + | Chr7:17001768-17001787 | MsG0780036946.01.T01:CDS | 65.0% |
| ! | TTGACGGACACGGTGGAGGG+CGG | - | Chr7:17001383-17001402 | None:intergenic | 65.0% |
| CCGGTGACAGCGGCGATGGT+AGG | - | Chr7:17001562-17001581 | None:intergenic | 70.0% | |
| GTGACCGGTGACAGCGGCGA+TGG | - | Chr7:17001566-17001585 | None:intergenic | 70.0% | |
| ! | GGAGGCGTGACCGGTGACAG+CGG | - | Chr7:17001572-17001591 | None:intergenic | 70.0% |
| ! | GGCGAAGGTGACGGCGAAGG+AGG | + | Chr7:17001765-17001784 | MsG0780036946.01.T01:CDS | 70.0% |
| !! | AGGTTGGTGATGCGGCGGCG+AGG | + | Chr7:17001722-17001741 | MsG0780036946.01.T01:CDS | 70.0% |
| !! | TTGGTGATGCGGCGGCGAGG+AGG | + | Chr7:17001725-17001744 | MsG0780036946.01.T01:CDS | 70.0% |
| ! | ACCTGCGGCGGAGGCGTGAC+CGG | - | Chr7:17001581-17001600 | None:intergenic | 75.0% |
| ! | GGCGGCGAAGGTGACGGCGA+AGG | + | Chr7:17001762-17001781 | MsG0780036946.01.T01:CDS | 75.0% |
| ! | ACCGGTCACGCCTCCGCCGC+AGG | + | Chr7:17001577-17001596 | MsG0780036946.01.T01:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 17001283 | 17001984 | 17001283 | ID=MsG0780036946.01;Name=MsG0780036946.01 |
| Chr7 | mRNA | 17001283 | 17001984 | 17001283 | ID=MsG0780036946.01.T01;Parent=MsG0780036946.01;Name=MsG0780036946.01.T01;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|1|1|0|233 |
| Chr7 | exon | 17001283 | 17001984 | 17001283 | ID=MsG0780036946.01.T01:exon:2850;Parent=MsG0780036946.01.T01 |
| Chr7 | CDS | 17001283 | 17001984 | 17001283 | ID=MsG0780036946.01.T01:cds;Parent=MsG0780036946.01.T01 |
| Gene Sequence |
| Protein sequence |
