Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280006768.01.T01 | XP_003593642.1 | 97.674 | 344 | 4 | 1 | 1 | 344 | 1 | 340 | 0 | 685 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280006768.01.T01 | Q80Y75 | 44.186 | 344 | 160 | 9 | 1 | 342 | 1 | 314 | 5.57E-88 | 270 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280006768.01.T01 | A2Q505 | 97.674 | 344 | 4 | 1 | 1 | 344 | 1 | 340 | 0.0 | 685 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0780041122.01 | MsG0280006768.01 | PPI |
| MsG0480020544.01 | MsG0280006768.01 | PPI |
| MsG0280009331.01 | MsG0280006768.01 | PPI |
| MsG0480018641.01 | MsG0280006768.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280006768.01.T01 | MTR_2g014470 | 97.674 | 344 | 4 | 1 | 1 | 344 | 1 | 340 | 0.0 | 685 |
| MsG0280006768.01.T01 | MTR_4g078850 | 78.902 | 346 | 68 | 3 | 1 | 343 | 1 | 344 | 0.0 | 542 |
| MsG0280006768.01.T01 | MTR_4g015840 | 69.186 | 344 | 100 | 3 | 1 | 343 | 1 | 339 | 1.34e-167 | 470 |
| MsG0280006768.01.T01 | MTR_2g090705 | 68.876 | 347 | 92 | 3 | 1 | 343 | 1 | 335 | 1.58e-163 | 460 |
| MsG0280006768.01.T01 | MTR_2g014480 | 68.605 | 344 | 89 | 6 | 1 | 333 | 1 | 336 | 2.75e-152 | 432 |
| MsG0280006768.01.T01 | MTR_3g108020 | 56.105 | 344 | 130 | 4 | 1 | 342 | 1 | 325 | 2.66e-128 | 370 |
| MsG0280006768.01.T01 | MTR_4g015840 | 68.548 | 248 | 75 | 2 | 97 | 343 | 17 | 262 | 1.28e-113 | 330 |
| MsG0280006768.01.T01 | MTR_3g437360 | 38.872 | 337 | 193 | 7 | 2 | 326 | 3 | 338 | 2.88e-68 | 218 |
| MsG0280006768.01.T01 | MTR_5g037880 | 54.237 | 177 | 81 | 0 | 166 | 342 | 98 | 274 | 2.63e-66 | 211 |
| MsG0280006768.01.T01 | MTR_5g037880 | 60.000 | 75 | 23 | 1 | 4 | 71 | 5 | 79 | 8.77e-21 | 90.9 |
| MsG0280006768.01.T01 | MTR_3g437840 | 51.553 | 161 | 78 | 0 | 183 | 343 | 2 | 162 | 4.81e-54 | 175 |
| MsG0280006768.01.T01 | MTR_7g109340 | 32.749 | 342 | 201 | 7 | 5 | 342 | 27 | 343 | 1.98e-49 | 169 |
| MsG0280006768.01.T01 | MTR_2g006890 | 45.000 | 180 | 98 | 1 | 164 | 342 | 196 | 375 | 2.24e-44 | 157 |
| MsG0280006768.01.T01 | MTR_3g088140 | 42.857 | 182 | 103 | 1 | 162 | 342 | 172 | 353 | 4.24e-44 | 155 |
| MsG0280006768.01.T01 | MTR_8g006430 | 33.333 | 363 | 202 | 11 | 5 | 342 | 15 | 362 | 1.53e-43 | 155 |
| MsG0280006768.01.T01 | MTR_3g437850 | 36.139 | 202 | 89 | 5 | 3 | 199 | 1 | 167 | 1.96e-32 | 119 |
| MsG0280006768.01.T01 | MTR_3g087030 | 28.338 | 367 | 211 | 11 | 4 | 341 | 82 | 425 | 3.96e-32 | 125 |
| MsG0280006768.01.T01 | MTR_2g087660 | 33.511 | 188 | 117 | 4 | 158 | 342 | 176 | 358 | 2.36e-25 | 105 |
| MsG0280006768.01.T01 | MTR_2g087660 | 60.563 | 71 | 23 | 2 | 5 | 75 | 14 | 79 | 4.92e-12 | 67.0 |
| MsG0280006768.01.T01 | MTR_4g050420 | 32.979 | 188 | 118 | 4 | 158 | 342 | 174 | 356 | 9.04e-25 | 104 |
| MsG0280006768.01.T01 | MTR_4g050420 | 59.155 | 71 | 24 | 2 | 5 | 75 | 14 | 79 | 3.48e-11 | 64.3 |
| MsG0280006768.01.T01 | MTR_5g065160 | 27.298 | 359 | 221 | 10 | 4 | 341 | 83 | 422 | 2.94e-23 | 100 |
| MsG0280006768.01.T01 | MTR_5g065160 | 27.298 | 359 | 221 | 10 | 4 | 341 | 82 | 421 | 3.03e-23 | 100 |
| MsG0280006768.01.T01 | MTR_5g065160 | 27.298 | 359 | 221 | 10 | 4 | 341 | 76 | 415 | 4.03e-23 | 100 |
| MsG0280006768.01.T01 | MTR_5g065160 | 27.298 | 359 | 221 | 10 | 4 | 341 | 83 | 422 | 4.94e-23 | 99.8 |
| MsG0280006768.01.T01 | MTR_2g104030 | 46.903 | 113 | 40 | 3 | 4 | 116 | 70 | 162 | 1.64e-20 | 92.8 |
| MsG0280006768.01.T01 | MTR_7g101070 | 60.000 | 65 | 26 | 0 | 4 | 68 | 358 | 422 | 5.18e-20 | 91.3 |
| MsG0280006768.01.T01 | MTR_7g112360 | 46.970 | 66 | 32 | 1 | 5 | 67 | 17 | 82 | 4.38e-16 | 75.1 |
| MsG0280006768.01.T01 | MTR_7g069480 | 51.429 | 70 | 32 | 1 | 3 | 72 | 26 | 93 | 7.18e-16 | 79.0 |
| MsG0280006768.01.T01 | MTR_7g112360 | 46.970 | 66 | 32 | 1 | 5 | 67 | 17 | 82 | 7.60e-16 | 73.2 |
| MsG0280006768.01.T01 | MTR_5g012530 | 48.649 | 74 | 36 | 1 | 4 | 75 | 12 | 85 | 1.02e-15 | 78.6 |
| MsG0280006768.01.T01 | MTR_2g087660 | 32.836 | 134 | 84 | 3 | 158 | 290 | 176 | 304 | 2.69e-15 | 76.3 |
| MsG0280006768.01.T01 | MTR_2g087660 | 60.563 | 71 | 23 | 2 | 5 | 75 | 14 | 79 | 2.97e-12 | 67.0 |
| MsG0280006768.01.T01 | MTR_3g027580 | 52.113 | 71 | 33 | 1 | 4 | 74 | 89 | 158 | 2.76e-15 | 77.0 |
| MsG0280006768.01.T01 | MTR_6g027110 | 44.000 | 75 | 38 | 1 | 3 | 73 | 1 | 75 | 5.95e-15 | 71.6 |
| MsG0280006768.01.T01 | MTR_5g065860 | 50.000 | 64 | 31 | 1 | 4 | 67 | 48 | 110 | 7.61e-15 | 71.2 |
| MsG0280006768.01.T01 | MTR_6g471050 | 25.212 | 353 | 199 | 17 | 30 | 343 | 7 | 333 | 1.03e-14 | 75.1 |
| MsG0280006768.01.T01 | MTR_1g110310 | 49.296 | 71 | 35 | 1 | 4 | 74 | 16 | 85 | 1.55e-14 | 74.3 |
| MsG0280006768.01.T01 | MTR_6g027030 | 45.333 | 75 | 37 | 1 | 3 | 73 | 1 | 75 | 1.72e-14 | 72.0 |
| MsG0280006768.01.T01 | MTR_8g022310 | 44.928 | 69 | 33 | 1 | 4 | 67 | 10 | 78 | 3.52e-14 | 71.2 |
| MsG0280006768.01.T01 | MTR_4g085070 | 50.000 | 60 | 27 | 1 | 11 | 67 | 19 | 78 | 4.96e-14 | 69.3 |
| MsG0280006768.01.T01 | MTR_8g022310 | 44.928 | 69 | 33 | 1 | 4 | 67 | 10 | 78 | 5.16e-14 | 70.1 |
| MsG0280006768.01.T01 | MTR_8g022310 | 43.478 | 69 | 34 | 1 | 4 | 67 | 10 | 78 | 5.25e-14 | 70.5 |
| MsG0280006768.01.T01 | MTR_8g022310 | 43.478 | 69 | 34 | 1 | 4 | 67 | 10 | 78 | 7.11e-14 | 70.5 |
| MsG0280006768.01.T01 | MTR_5g035770 | 47.945 | 73 | 37 | 1 | 4 | 76 | 25 | 96 | 1.69e-13 | 71.2 |
| MsG0280006768.01.T01 | MTR_6g026940 | 44.928 | 69 | 34 | 1 | 3 | 67 | 1 | 69 | 2.01e-13 | 68.2 |
| MsG0280006768.01.T01 | MTR_1g052110 | 47.692 | 65 | 33 | 1 | 6 | 70 | 40 | 103 | 2.72e-13 | 69.7 |
| MsG0280006768.01.T01 | MTR_4g023470 | 39.167 | 120 | 59 | 4 | 5 | 123 | 87 | 193 | 6.12e-13 | 69.7 |
| MsG0280006768.01.T01 | MTR_2g436560 | 38.710 | 124 | 64 | 5 | 4 | 123 | 104 | 219 | 1.14e-12 | 68.6 |
| MsG0280006768.01.T01 | MTR_7g092380 | 42.105 | 76 | 40 | 2 | 6 | 78 | 24 | 98 | 3.87e-12 | 66.2 |
| MsG0280006768.01.T01 | MTR_1g029460 | 41.667 | 72 | 41 | 1 | 3 | 74 | 5 | 75 | 5.23e-12 | 66.6 |
| MsG0280006768.01.T01 | MTR_5g004570 | 45.070 | 71 | 38 | 1 | 4 | 74 | 6 | 75 | 1.52e-11 | 63.9 |
| MsG0280006768.01.T01 | MTR_1g087580 | 34.646 | 127 | 76 | 3 | 221 | 342 | 59 | 183 | 4.95e-11 | 61.6 |
| MsG0280006768.01.T01 | MTR_4g094275 | 41.558 | 77 | 40 | 3 | 2 | 75 | 49 | 123 | 8.06e-11 | 60.8 |
| MsG0280006768.01.T01 | MTR_4g109510 | 44.118 | 68 | 35 | 1 | 5 | 69 | 9 | 76 | 8.79e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280006768.01.T01 | AT2G20560 | 74.352 | 347 | 73 | 4 | 1 | 342 | 1 | 336 | 0.0 | 517 |
| MsG0280006768.01.T01 | AT4G28480 | 70.255 | 353 | 88 | 2 | 1 | 342 | 1 | 347 | 7.26e-173 | 484 |
| MsG0280006768.01.T01 | AT3G08910 | 66.472 | 343 | 93 | 5 | 1 | 343 | 1 | 321 | 2.14e-160 | 451 |
| MsG0280006768.01.T01 | AT5G01390 | 63.143 | 350 | 108 | 4 | 1 | 344 | 1 | 335 | 1.75e-155 | 439 |
| MsG0280006768.01.T01 | AT4G28480 | 63.158 | 342 | 73 | 2 | 1 | 342 | 1 | 289 | 1.57e-143 | 407 |
| MsG0280006768.01.T01 | AT5G25530 | 59.207 | 353 | 119 | 7 | 1 | 343 | 1 | 338 | 1.26e-138 | 397 |
| MsG0280006768.01.T01 | AT5G25530 | 57.895 | 361 | 119 | 8 | 1 | 343 | 1 | 346 | 1.82e-135 | 389 |
| MsG0280006768.01.T01 | AT1G10350 | 55.331 | 347 | 149 | 3 | 1 | 342 | 1 | 346 | 5.48e-128 | 370 |
| MsG0280006768.01.T01 | AT1G59725 | 55.652 | 345 | 133 | 4 | 1 | 342 | 1 | 328 | 1.78e-126 | 366 |
| MsG0280006768.01.T01 | AT3G47940 | 53.463 | 361 | 134 | 5 | 1 | 342 | 1 | 346 | 7.69e-126 | 365 |
| MsG0280006768.01.T01 | AT5G01390 | 54.651 | 344 | 89 | 4 | 1 | 344 | 1 | 277 | 7.74e-124 | 357 |
| MsG0280006768.01.T01 | AT2G20550 | 55.903 | 288 | 72 | 4 | 103 | 342 | 3 | 283 | 1.87e-99 | 295 |
| MsG0280006768.01.T01 | AT2G20550 | 55.903 | 288 | 72 | 4 | 103 | 342 | 3 | 283 | 1.87e-99 | 295 |
| MsG0280006768.01.T01 | AT5G01390 | 46.512 | 344 | 78 | 5 | 1 | 344 | 1 | 238 | 2.27e-93 | 278 |
| MsG0280006768.01.T01 | AT5G01390 | 55.238 | 210 | 73 | 4 | 1 | 204 | 1 | 195 | 1.21e-68 | 215 |
| MsG0280006768.01.T01 | AT1G44160 | 47.753 | 178 | 93 | 0 | 165 | 342 | 176 | 353 | 2.92e-47 | 164 |
| MsG0280006768.01.T01 | AT3G62600 | 32.659 | 346 | 206 | 7 | 2 | 343 | 24 | 346 | 1.37e-45 | 159 |
| MsG0280006768.01.T01 | AT1G11040 | 43.353 | 173 | 98 | 0 | 163 | 335 | 253 | 425 | 7.62e-43 | 154 |
| MsG0280006768.01.T01 | AT3G44110 | 33.241 | 361 | 201 | 9 | 5 | 342 | 15 | 358 | 1.88e-39 | 144 |
| MsG0280006768.01.T01 | AT5G22060 | 33.149 | 362 | 201 | 10 | 5 | 342 | 15 | 359 | 9.10e-38 | 140 |
| MsG0280006768.01.T01 | AT3G44110 | 33.233 | 331 | 181 | 9 | 5 | 312 | 15 | 328 | 4.25e-33 | 125 |
| MsG0280006768.01.T01 | AT1G80030 | 28.533 | 375 | 209 | 13 | 4 | 341 | 75 | 427 | 2.92e-28 | 115 |
| MsG0280006768.01.T01 | AT1G80030 | 28.533 | 375 | 209 | 13 | 4 | 341 | 75 | 427 | 3.89e-28 | 114 |
| MsG0280006768.01.T01 | AT1G80030 | 28.533 | 375 | 209 | 13 | 4 | 341 | 75 | 427 | 3.89e-28 | 114 |
| MsG0280006768.01.T01 | AT1G80030 | 28.533 | 375 | 209 | 13 | 4 | 341 | 75 | 427 | 3.89e-28 | 114 |
| MsG0280006768.01.T01 | AT5G48030 | 26.810 | 373 | 198 | 11 | 4 | 335 | 94 | 432 | 1.81e-25 | 106 |
| MsG0280006768.01.T01 | AT2G22360 | 65.333 | 75 | 20 | 2 | 4 | 76 | 86 | 156 | 7.03e-22 | 96.3 |
| MsG0280006768.01.T01 | AT2G22360 | 30.147 | 136 | 91 | 3 | 208 | 341 | 295 | 428 | 5.23e-12 | 67.0 |
| MsG0280006768.01.T01 | AT3G17830 | 53.261 | 92 | 37 | 2 | 2 | 91 | 61 | 148 | 5.22e-21 | 94.4 |
| MsG0280006768.01.T01 | AT4G39960 | 58.904 | 73 | 28 | 1 | 4 | 76 | 85 | 155 | 2.33e-20 | 92.0 |
| MsG0280006768.01.T01 | AT4G39960 | 30.147 | 136 | 91 | 3 | 208 | 341 | 301 | 434 | 1.93e-12 | 68.2 |
| MsG0280006768.01.T01 | AT4G39960 | 58.904 | 73 | 28 | 1 | 4 | 76 | 85 | 155 | 2.33e-20 | 92.0 |
| MsG0280006768.01.T01 | AT4G39960 | 30.147 | 136 | 91 | 3 | 208 | 341 | 301 | 434 | 1.93e-12 | 68.2 |
| MsG0280006768.01.T01 | AT5G03160 | 53.846 | 65 | 30 | 0 | 4 | 68 | 370 | 434 | 6.27e-17 | 82.0 |
| MsG0280006768.01.T01 | AT5G16650 | 58.209 | 67 | 27 | 1 | 4 | 70 | 11 | 76 | 6.67e-17 | 77.8 |
| MsG0280006768.01.T01 | AT5G16650 | 59.375 | 64 | 25 | 1 | 4 | 67 | 11 | 73 | 9.18e-17 | 76.3 |
| MsG0280006768.01.T01 | AT1G59980 | 47.826 | 69 | 35 | 1 | 6 | 74 | 25 | 92 | 1.63e-15 | 77.0 |
| MsG0280006768.01.T01 | AT2G41000 | 47.826 | 69 | 32 | 1 | 3 | 67 | 2 | 70 | 1.83e-15 | 74.7 |
| MsG0280006768.01.T01 | AT1G56300 | 48.485 | 66 | 31 | 1 | 5 | 67 | 14 | 79 | 2.28e-15 | 73.2 |
| MsG0280006768.01.T01 | AT1G56300 | 48.485 | 66 | 31 | 1 | 5 | 67 | 14 | 79 | 2.54e-15 | 72.0 |
| MsG0280006768.01.T01 | AT1G68370 | 52.113 | 71 | 33 | 1 | 4 | 74 | 17 | 86 | 2.59e-15 | 77.0 |
| MsG0280006768.01.T01 | AT1G59980 | 47.826 | 69 | 35 | 1 | 6 | 74 | 25 | 92 | 3.96e-15 | 76.3 |
| MsG0280006768.01.T01 | AT2G41000 | 47.826 | 69 | 32 | 1 | 3 | 67 | 2 | 70 | 5.74e-15 | 72.8 |
| MsG0280006768.01.T01 | AT3G08970 | 52.000 | 75 | 32 | 2 | 3 | 77 | 26 | 96 | 1.98e-14 | 74.7 |
| MsG0280006768.01.T01 | AT3G08970 | 52.000 | 75 | 32 | 2 | 3 | 77 | 26 | 96 | 1.98e-14 | 74.7 |
| MsG0280006768.01.T01 | AT2G35720 | 47.945 | 73 | 36 | 1 | 4 | 74 | 15 | 87 | 3.36e-14 | 73.9 |
| MsG0280006768.01.T01 | AT2G21510 | 50.000 | 72 | 35 | 1 | 4 | 75 | 6 | 76 | 1.52e-13 | 71.2 |
| MsG0280006768.01.T01 | AT2G21510 | 50.000 | 72 | 35 | 1 | 4 | 75 | 6 | 76 | 1.52e-13 | 71.2 |
| MsG0280006768.01.T01 | AT2G21510 | 50.000 | 72 | 35 | 1 | 4 | 75 | 6 | 76 | 1.74e-13 | 71.2 |
| MsG0280006768.01.T01 | AT2G21510 | 50.000 | 72 | 35 | 1 | 4 | 75 | 6 | 76 | 1.74e-13 | 71.2 |
| MsG0280006768.01.T01 | AT2G21510 | 50.000 | 72 | 35 | 1 | 4 | 75 | 6 | 76 | 2.15e-13 | 70.5 |
| MsG0280006768.01.T01 | AT2G33735 | 43.077 | 65 | 36 | 1 | 4 | 68 | 22 | 85 | 1.10e-12 | 64.7 |
| MsG0280006768.01.T01 | AT2G33735 | 43.077 | 65 | 36 | 1 | 4 | 68 | 22 | 85 | 1.10e-12 | 64.7 |
| MsG0280006768.01.T01 | AT1G71000 | 45.455 | 66 | 33 | 1 | 5 | 67 | 9 | 74 | 1.59e-12 | 65.5 |
| MsG0280006768.01.T01 | AT1G24120 | 44.595 | 74 | 40 | 1 | 4 | 77 | 20 | 92 | 1.82e-12 | 68.6 |
| MsG0280006768.01.T01 | AT5G06910 | 46.154 | 65 | 34 | 1 | 6 | 70 | 31 | 94 | 2.00e-12 | 67.4 |
| MsG0280006768.01.T01 | AT1G71000 | 45.455 | 66 | 33 | 1 | 5 | 67 | 9 | 74 | 3.61e-12 | 64.3 |
| MsG0280006768.01.T01 | AT5G05750 | 36.283 | 113 | 61 | 3 | 4 | 116 | 114 | 215 | 4.82e-12 | 66.2 |
| MsG0280006768.01.T01 | AT4G39150 | 47.222 | 72 | 37 | 1 | 4 | 75 | 6 | 76 | 4.82e-12 | 66.6 |
| MsG0280006768.01.T01 | AT4G39150 | 47.222 | 72 | 37 | 1 | 4 | 75 | 6 | 76 | 4.82e-12 | 66.6 |
| MsG0280006768.01.T01 | AT4G39150 | 47.222 | 72 | 37 | 1 | 4 | 75 | 6 | 76 | 4.82e-12 | 66.6 |
| MsG0280006768.01.T01 | AT3G14200 | 45.312 | 64 | 33 | 1 | 6 | 67 | 14 | 77 | 6.76e-12 | 65.1 |
| MsG0280006768.01.T01 | AT1G21080 | 43.038 | 79 | 44 | 1 | 3 | 81 | 5 | 82 | 2.30e-11 | 65.1 |
| MsG0280006768.01.T01 | AT1G21080 | 43.038 | 79 | 44 | 1 | 3 | 81 | 5 | 82 | 2.36e-11 | 64.7 |
| MsG0280006768.01.T01 | AT3G13310 | 46.774 | 62 | 29 | 1 | 6 | 67 | 66 | 123 | 2.38e-11 | 62.0 |
| MsG0280006768.01.T01 | AT5G49060 | 46.269 | 67 | 34 | 1 | 4 | 70 | 99 | 163 | 2.96e-11 | 64.3 |
| MsG0280006768.01.T01 | AT5G49060 | 46.269 | 67 | 34 | 1 | 4 | 70 | 99 | 163 | 2.96e-11 | 64.3 |
| MsG0280006768.01.T01 | AT4G13830 | 38.806 | 67 | 40 | 1 | 3 | 68 | 65 | 131 | 3.01e-11 | 61.6 |
| MsG0280006768.01.T01 | AT1G72416 | 34.831 | 89 | 49 | 2 | 4 | 90 | 5 | 86 | 4.13e-11 | 62.0 |
| MsG0280006768.01.T01 | AT4G13830 | 38.806 | 67 | 40 | 1 | 3 | 68 | 65 | 131 | 4.14e-11 | 61.6 |
| MsG0280006768.01.T01 | AT3G12170 | 43.077 | 65 | 36 | 1 | 6 | 70 | 13 | 76 | 6.26e-11 | 62.4 |
| MsG0280006768.01.T01 | AT1G72416 | 34.444 | 90 | 50 | 2 | 4 | 91 | 5 | 87 | 6.50e-11 | 61.2 |
| MsG0280006768.01.T01 | AT1G72416 | 34.444 | 90 | 50 | 2 | 4 | 91 | 5 | 87 | 8.21e-11 | 60.8 |
| MsG0280006768.01.T01 | AT1G72416 | 34.444 | 90 | 50 | 2 | 4 | 91 | 5 | 87 | 8.27e-11 | 60.8 |
Find 105 sgRNAs with CRISPR-Local
Find 167 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCTTCTTTGAAGGATCTTT+TGG | 0.174093 | 2:-5998722 | None:intergenic |
| TTCAGATATCTCTTTGAATT+TGG | 0.183628 | 2:-5997100 | None:intergenic |
| AAGATATCGTTTGCGTTTCT+TGG | 0.221316 | 2:-5997399 | None:intergenic |
| TTATTTGAGGGATTCTTATC+AGG | 0.267987 | 2:-5997063 | None:intergenic |
| GGATGAATAACATTGTTTAT+AGG | 0.269485 | 2:-5998659 | None:intergenic |
| GGTTGCTCATTTCCTTTCTC+AGG | 0.283976 | 2:-5998470 | None:intergenic |
| TATGGAGAAGAAGGGCTTAA+AGG | 0.285303 | 2:+5997294 | MsG0280006768.01.T01:CDS |
| AGTCAAACCAGGGTGGAAAA+AGG | 0.301287 | 2:+5998430 | MsG0280006768.01.T01:CDS |
| TCGGGTATTCAAGCCCGTTT+GGG | 0.303828 | 2:+5997433 | MsG0280006768.01.T01:CDS |
| TGCTCAGAAGTCAACCTTGC+TGG | 0.309488 | 2:-5998776 | None:intergenic |
| TTCGGGTATTCAAGCCCGTT+TGG | 0.333587 | 2:+5997432 | MsG0280006768.01.T01:CDS |
| AGTCTTGAGGAGCTCTATAA+AGG | 0.348476 | 2:+5997615 | MsG0280006768.01.T01:CDS |
| AAAGCAATTTATGATCAATA+TGG | 0.348727 | 2:+5997276 | MsG0280006768.01.T01:CDS |
| CTTATCAGGGTGCCACTTCA+TGG | 0.353470 | 2:-5997049 | None:intergenic |
| CTTCAAAGAAGGGTAATCTT+AGG | 0.357619 | 2:+5998732 | MsG0280006768.01.T01:CDS |
| TACAAGAGATGGCAATGATT+TGG | 0.359667 | 2:+5998550 | MsG0280006768.01.T01:CDS |
| CTAAGATTACCCTTCTTTGA+AGG | 0.367122 | 2:-5998731 | None:intergenic |
| AGATCTGCTGGTATCACATT+TGG | 0.371997 | 2:-5998491 | None:intergenic |
| AGATCCTTTGGTGGAATGTT+TGG | 0.375285 | 2:+5997495 | MsG0280006768.01.T01:CDS |
| TAGTCTTCCAATCCTTAGTT+TGG | 0.376160 | 2:+5998862 | MsG0280006768.01.T01:three_prime_UTR |
| TCTTAAAATTGATGTGTGAT+TGG | 0.379253 | 2:+5999004 | MsG0280006768.01.T01:three_prime_UTR |
| CTCAGCGTCTTTCTTATTTG+AGG | 0.384413 | 2:-5997076 | None:intergenic |
| GGAATAGGCATACCTTCCTT+TGG | 0.388950 | 2:-5998701 | None:intergenic |
| CCACCACCTCAAGATGCTTC+TGG | 0.389485 | 2:+5997324 | MsG0280006768.01.T01:CDS |
| GAGATGGACCAACAACGTTT+AGG | 0.400923 | 2:+5997370 | MsG0280006768.01.T01:CDS |
| ATGGAGAAGAAGGGCTTAAA+GGG | 0.402600 | 2:+5997295 | MsG0280006768.01.T01:CDS |
| AGAGGTGGAGCCAGATCCTT+TGG | 0.409550 | 2:+5997483 | MsG0280006768.01.T01:CDS |
| TCACTAGCAGAAGCTTTAAC+AGG | 0.415182 | 2:+5998590 | MsG0280006768.01.T01:CDS |
| CACCTCAAGATGCTTCTGGC+GGG | 0.421807 | 2:+5997328 | MsG0280006768.01.T01:CDS |
| GGAATAACCTCTTCATAGCT+TGG | 0.426392 | 2:-5998680 | None:intergenic |
| AGTTGGAATCAAGAAACTTC+TGG | 0.427430 | 2:+5998802 | MsG0280006768.01.T01:CDS |
| AAACCGTAATGTTACCTCAT+AGG | 0.442940 | 2:-5997124 | None:intergenic |
| TATGATCAATATGGAGAAGA+AGG | 0.445033 | 2:+5997285 | MsG0280006768.01.T01:CDS |
| GTCTCACAACACTGGATGGC+AGG | 0.445115 | 2:+5998624 | MsG0280006768.01.T01:CDS |
| TCAGCGTCTTTCTTATTTGA+GGG | 0.447077 | 2:-5997075 | None:intergenic |
| TTGACTTCTGAGCAGAAAGT+TGG | 0.447653 | 2:+5998785 | MsG0280006768.01.T01:CDS |
| TCATAAATTGCTTTCTTCTG+TGG | 0.457705 | 2:-5997267 | None:intergenic |
| CACCTTCAAAATTGAGGTTG+AGG | 0.459119 | 2:+5998949 | MsG0280006768.01.T01:three_prime_UTR |
| GTCTTGAGGAGCTCTATAAA+GGG | 0.464624 | 2:+5997616 | MsG0280006768.01.T01:CDS |
| TCCAAAAGATCCTTCAAAGA+AGG | 0.470055 | 2:+5998721 | MsG0280006768.01.T01:CDS |
| GTTGCTCATTTCCTTTCTCA+GGG | 0.474664 | 2:-5998469 | None:intergenic |
| TATTTGAGGGATTCTTATCA+GGG | 0.478544 | 2:-5997062 | None:intergenic |
| GGATTGAACCTAAACGTTGT+TGG | 0.479222 | 2:-5997378 | None:intergenic |
| GTTGCACACCTTCAAAATTG+AGG | 0.482103 | 2:+5998943 | MsG0280006768.01.T01:three_prime_UTR |
| TCCTTTGGTGGAATGTTTGG+TGG | 0.483436 | 2:+5997498 | MsG0280006768.01.T01:CDS |
| ATAACAAATATAAGATCTGC+TGG | 0.490598 | 2:-5998503 | None:intergenic |
| AAACATTCCACCAAAGGATC+TGG | 0.493654 | 2:-5997493 | None:intergenic |
| GAAAGAACCAAACTAAGGAT+TGG | 0.496962 | 2:-5998869 | None:intergenic |
| AAAATCACATTCCCTGAGAA+AGG | 0.497224 | 2:+5998458 | MsG0280006768.01.T01:CDS |
| ATTGTTAAGATTTCCTCCAC+TGG | 0.504925 | 2:-5998404 | None:intergenic |
| GCTGGTGGGAATGGAATGAG+AGG | 0.505271 | 2:+5997465 | MsG0280006768.01.T01:CDS |
| CCAGAAGCATCTTGAGGTGG+TGG | 0.511552 | 2:-5997324 | None:intergenic |
| ACATTCTTCCAAAGTGGAGA+TGG | 0.515684 | 2:+5997354 | MsG0280006768.01.T01:CDS |
| CCAAAAGATCCTTCAAAGAA+GGG | 0.516873 | 2:+5998722 | MsG0280006768.01.T01:CDS |
| TTACTTCATTTGATGAAGCT+AGG | 0.518857 | 2:+5997535 | MsG0280006768.01.T01:CDS |
| ACACTTCACAATGAATGCAT+TGG | 0.522235 | 2:-5998838 | None:intergenic |
| AGAGATATCTGAAGCCTATG+AGG | 0.524531 | 2:+5997110 | MsG0280006768.01.T01:CDS |
| TTGCTGAATGGTTGTTGCGA+TGG | 0.529143 | 2:-5996921 | None:intergenic |
| CGAGGACCTTGCTGACGCAT+AGG | 0.535830 | 2:-5997558 | None:intergenic |
| TTTCTTCAACTCTTCTTCTG+TGG | 0.542639 | 2:-5997010 | None:intergenic |
| CATGGTGTATTTACAAGAGA+TGG | 0.542850 | 2:+5998539 | MsG0280006768.01.T01:CDS |
| CCACCTCAAGATGCTTCTGG+CGG | 0.544744 | 2:+5997327 | MsG0280006768.01.T01:CDS |
| ATCGAAAACTTGCCATGAAG+TGG | 0.546006 | 2:+5997037 | MsG0280006768.01.T01:CDS |
| TAGATTGCCTTGTAGTCTTG+AGG | 0.546637 | 2:+5997602 | MsG0280006768.01.T01:CDS |
| CACTGTTCGTCTCACAACAC+TGG | 0.550423 | 2:+5998616 | MsG0280006768.01.T01:CDS |
| AAGTCGAAAGAACCAAACTA+AGG | 0.551177 | 2:-5998874 | None:intergenic |
| GGTTGTTGCGATGGTTTGAA+AGG | 0.552403 | 2:-5996912 | None:intergenic |
| TTGTTGGTCCATCTCCACTT+TGG | 0.559606 | 2:-5997362 | None:intergenic |
| TAGAGCTCCTCAAGACTACA+AGG | 0.560767 | 2:-5997609 | None:intergenic |
| TCACAACGCAAGAAAACCAT+GGG | 0.565783 | 2:+5996949 | MsG0280006768.01.T01:exon |
| TCAATAGCAGCTGCCTTGCG+AGG | 0.571839 | 2:-5997576 | None:intergenic |
| TTAACAATTGAAGTCAAACC+AGG | 0.573245 | 2:+5998419 | MsG0280006768.01.T01:CDS |
| ATGATCAATATGGAGAAGAA+GGG | 0.585118 | 2:+5997286 | MsG0280006768.01.T01:CDS |
| TATTCATCCAAGCTATGAAG+AGG | 0.585414 | 2:+5998673 | MsG0280006768.01.T01:CDS |
| CGGGTATTCAAGCCCGTTTG+GGG | 0.586346 | 2:+5997434 | MsG0280006768.01.T01:CDS |
| ACCTCAAGATGCTTCTGGCG+GGG | 0.588669 | 2:+5997329 | MsG0280006768.01.T01:CDS |
| GGGAAATTGCAGATGCAAGT+GGG | 0.597387 | 2:+5997664 | MsG0280006768.01.T01:CDS |
| AGGGAAATTGCAGATGCAAG+TGG | 0.598468 | 2:+5997663 | MsG0280006768.01.T01:CDS |
| TTAATATCAAGTTTCCAGCA+AGG | 0.601452 | 2:+5998762 | MsG0280006768.01.T01:CDS |
| GGTGGAGCCAGATCCTTTGG+TGG | 0.611596 | 2:+5997486 | MsG0280006768.01.T01:CDS |
| AGAAACTTCTGGCACCGTAG+TGG | 0.613726 | 2:+5998813 | MsG0280006768.01.T01:CDS |
| GTTCGTCTCACAACACTGGA+TGG | 0.619421 | 2:+5998620 | MsG0280006768.01.T01:CDS |
| CTATGAAGAGGTTATTCCAA+AGG | 0.619874 | 2:+5998685 | MsG0280006768.01.T01:CDS |
| GGTGGGAATGGAATGAGAGG+TGG | 0.620935 | 2:+5997468 | MsG0280006768.01.T01:CDS |
| GCTAGGCCTATGCGTCAGCA+AGG | 0.621159 | 2:+5997552 | MsG0280006768.01.T01:CDS |
| ACCACCAAACATTCCACCAA+AGG | 0.627179 | 2:-5997499 | None:intergenic |
| TTGCAGCAAAACTATGCCAG+TGG | 0.627496 | 2:+5998388 | MsG0280006768.01.T01:intron |
| TCTCACAACACTGGATGGCA+GGG | 0.628562 | 2:+5998625 | MsG0280006768.01.T01:CDS |
| GAAGAGGTTATTCCAAAGGA+AGG | 0.631458 | 2:+5998689 | MsG0280006768.01.T01:CDS |
| CCGCCAGAAGCATCTTGAGG+TGG | 0.632302 | 2:-5997327 | None:intergenic |
| CAGCAAAACTATGCCAGTGG+AGG | 0.633181 | 2:+5998391 | MsG0280006768.01.T01:intron |
| ATCACAACGCAAGAAAACCA+TGG | 0.633555 | 2:+5996948 | MsG0280006768.01.T01:exon |
| TGAATGCATTGGATCCACTA+CGG | 0.638924 | 2:-5998827 | None:intergenic |
| GCCCCGCCAGAAGCATCTTG+AGG | 0.639522 | 2:-5997330 | None:intergenic |
| GCGTCAGCAAGGTCCTCGCA+AGG | 0.646053 | 2:+5997563 | MsG0280006768.01.T01:CDS |
| TAAGAACTTAGATCAACATG+TGG | 0.647967 | 2:-5998986 | None:intergenic |
| GGGTATTCAAGCCCGTTTGG+GGG | 0.650237 | 2:+5997435 | MsG0280006768.01.T01:CDS |
| GGGGCTACATTCTTCCAAAG+TGG | 0.666162 | 2:+5997348 | MsG0280006768.01.T01:CDS |
| CTCAAATAAGAAAGACGCTG+AGG | 0.667226 | 2:+5997077 | MsG0280006768.01.T01:CDS |
| TCTCTTGTAAATACACCATG+TGG | 0.682973 | 2:-5998536 | None:intergenic |
| TAACAATTGAAGTCAAACCA+GGG | 0.689215 | 2:+5998420 | MsG0280006768.01.T01:CDS |
| CAATTGAAGTCAAACCAGGG+TGG | 0.720314 | 2:+5998423 | MsG0280006768.01.T01:CDS |
| GTTATTGATGAGAAACCACA+TGG | 0.724666 | 2:+5998521 | MsG0280006768.01.T01:CDS |
| CACAACGCAAGAAAACCATG+GGG | 0.752564 | 2:+5996950 | MsG0280006768.01.T01:exon |
| ACAACGCAAGAAAACCATGG+GGG | 0.804332 | 2:+5996951 | MsG0280006768.01.T01:exon |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCTAAATTATTTTAAAAAAC+AGG | - | Chr2:5997846-5997865 | None:intergenic | 10.0% |
| !! | TAGAAATTCTGAATATTAAT+TGG | + | Chr2:5997213-5997232 | MsG0280006768.01.T01:intron | 15.0% |
| !! | AAAGCAATTTATGATCAATA+TGG | + | Chr2:5997276-5997295 | MsG0280006768.01.T01:CDS | 20.0% |
| !! | ATCTATTTGTTTAAACAAGA+TGG | - | Chr2:5997924-5997943 | None:intergenic | 20.0% |
| !! | TTCATGACTCATAAATAAAA+TGG | + | Chr2:5997728-5997747 | MsG0280006768.01.T01:intron | 20.0% |
| !!! | TTCTGAATATTAATTGGTTT+TGG | + | Chr2:5997219-5997238 | MsG0280006768.01.T01:intron | 20.0% |
| ! | AAAAGTTGAACAGTTCAATT+TGG | + | Chr2:5998181-5998200 | MsG0280006768.01.T01:intron | 25.0% |
| ! | ACAACTTGCAATTTAAAAAC+TGG | - | Chr2:5998285-5998304 | None:intergenic | 25.0% |
| ! | ATAACAAATATAAGATCTGC+TGG | - | Chr2:5998506-5998525 | None:intergenic | 25.0% |
| ! | ATGAATAATTCAGCCAAAAT+TGG | - | Chr2:5998364-5998383 | None:intergenic | 25.0% |
| ! | CAAAAAGATGAAGATTTCAA+GGG | + | Chr2:5997644-5997663 | MsG0280006768.01.T01:CDS | 25.0% |
| ! | GGATGAATAACATTGTTTAT+AGG | - | Chr2:5998662-5998681 | None:intergenic | 25.0% |
| ! | TCTTAAAATTGATGTGTGAT+TGG | + | Chr2:5999004-5999023 | MsG0280006768.01.T01:three_prime_UTR | 25.0% |
| ! | TGATATTTAAACCAATGACA+CGG | - | Chr2:5998157-5998176 | None:intergenic | 25.0% |
| ! | TTCAGATATCTCTTTGAATT+TGG | - | Chr2:5997103-5997122 | None:intergenic | 25.0% |
| !! | TCTTCTTTTACTAGTTGTTA+GGG | + | Chr2:5997156-5997175 | MsG0280006768.01.T01:intron | 25.0% |
| !! | TTCTTCTTTTACTAGTTGTT+AGG | + | Chr2:5997155-5997174 | MsG0280006768.01.T01:intron | 25.0% |
| !!! | AAATTGCAAGTTGTTTTTGT+GGG | + | Chr2:5998291-5998310 | MsG0280006768.01.T01:intron | 25.0% |
| !!! | GTTCTTTCGACTTTTTTTAT+AGG | + | Chr2:5998884-5998903 | MsG0280006768.01.T01:three_prime_UTR | 25.0% |
| !!! | TAAATTGCAAGTTGTTTTTG+TGG | + | Chr2:5998290-5998309 | MsG0280006768.01.T01:intron | 25.0% |
| ATCAAGATAGACATACAGAT+AGG | + | Chr2:5997808-5997827 | MsG0280006768.01.T01:intron | 30.0% | |
| ATCGACACTTATGATCAAAA+AGG | - | Chr2:5997187-5997206 | None:intergenic | 30.0% | |
| ATGATCAATATGGAGAAGAA+GGG | + | Chr2:5997286-5997305 | MsG0280006768.01.T01:CDS | 30.0% | |
| ATTGAAGTTAAGTCATCCTA+TGG | - | Chr2:5997970-5997989 | None:intergenic | 30.0% | |
| CCAAAAAGATGAAGATTTCA+AGG | + | Chr2:5997643-5997662 | MsG0280006768.01.T01:CDS | 30.0% | |
| TAACAATTGAAGTCAAACCA+GGG | + | Chr2:5998420-5998439 | MsG0280006768.01.T01:CDS | 30.0% | |
| TAAGAACTTAGATCAACATG+TGG | - | Chr2:5998989-5999008 | None:intergenic | 30.0% | |
| TATGATCAATATGGAGAAGA+AGG | + | Chr2:5997285-5997304 | MsG0280006768.01.T01:CDS | 30.0% | |
| TATTTGAGGGATTCTTATCA+GGG | - | Chr2:5997065-5997084 | None:intergenic | 30.0% | |
| TCATAAATTGCTTTCTTCTG+TGG | - | Chr2:5997270-5997289 | None:intergenic | 30.0% | |
| TTAACAATTGAAGTCAAACC+AGG | + | Chr2:5998419-5998438 | MsG0280006768.01.T01:CDS | 30.0% | |
| TTAATATCAAGTTTCCAGCA+AGG | + | Chr2:5998762-5998781 | MsG0280006768.01.T01:CDS | 30.0% | |
| TTACTTCATTTGATGAAGCT+AGG | + | Chr2:5997535-5997554 | MsG0280006768.01.T01:CDS | 30.0% | |
| TTATTTGAGGGATTCTTATC+AGG | - | Chr2:5997066-5997085 | None:intergenic | 30.0% | |
| ! | AGACTACTACAAGATTTTGA+AGG | + | Chr2:5996975-5996994 | MsG0280006768.01.T01:CDS | 30.0% |
| ! | ATATCTTTGCAGAGTTTTTC+GGG | + | Chr2:5997415-5997434 | MsG0280006768.01.T01:CDS | 30.0% |
| ! | CCTTGAAATCTTCATCTTTT+TGG | - | Chr2:5997646-5997665 | None:intergenic | 30.0% |
| ! | GATATCTTTGCAGAGTTTTT+CGG | + | Chr2:5997414-5997433 | MsG0280006768.01.T01:CDS | 30.0% |
| ! | TGAGTCATAAGTTCCAATTT+TGG | + | Chr2:5998348-5998367 | MsG0280006768.01.T01:intron | 30.0% |
| !! | GTGTCATTGGTTTAAATATC+AGG | + | Chr2:5998156-5998175 | MsG0280006768.01.T01:intron | 30.0% |
| !!! | AATTGCAAGTTGTTTTTGTG+GGG | + | Chr2:5998292-5998311 | MsG0280006768.01.T01:intron | 30.0% |
| !!! | TGGTTTTGGTTTTTTGATGA+AGG | + | Chr2:5997233-5997252 | MsG0280006768.01.T01:intron | 30.0% |
| !!! | TTTGAAGGATCTTTTGGAAT+AGG | - | Chr2:5998719-5998738 | None:intergenic | 30.0% |
| AAAATCACATTCCCTGAGAA+AGG | + | Chr2:5998458-5998477 | MsG0280006768.01.T01:CDS | 35.0% | |
| AAACCGTAATGTTACCTCAT+AGG | - | Chr2:5997127-5997146 | None:intergenic | 35.0% | |
| AAGATATCGTTTGCGTTTCT+TGG | - | Chr2:5997402-5997421 | None:intergenic | 35.0% | |
| AAGCCTATGAGGTAACATTA+CGG | + | Chr2:5997121-5997140 | MsG0280006768.01.T01:intron | 35.0% | |
| AAGTCGAAAGAACCAAACTA+AGG | - | Chr2:5998877-5998896 | None:intergenic | 35.0% | |
| ACACTTCACAATGAATGCAT+TGG | - | Chr2:5998841-5998860 | None:intergenic | 35.0% | |
| AGTTGGAATCAAGAAACTTC+TGG | + | Chr2:5998802-5998821 | MsG0280006768.01.T01:CDS | 35.0% | |
| ATTGTTAAGATTTCCTCCAC+TGG | - | Chr2:5998407-5998426 | None:intergenic | 35.0% | |
| CATGGTGTATTTACAAGAGA+TGG | + | Chr2:5998539-5998558 | MsG0280006768.01.T01:CDS | 35.0% | |
| CCAAAAGATCCTTCAAAGAA+GGG | + | Chr2:5998722-5998741 | MsG0280006768.01.T01:CDS | 35.0% | |
| CTAAGATTACCCTTCTTTGA+AGG | - | Chr2:5998734-5998753 | None:intergenic | 35.0% | |
| CTATGAAGAGGTTATTCCAA+AGG | + | Chr2:5998685-5998704 | MsG0280006768.01.T01:CDS | 35.0% | |
| CTTCAAAGAAGGGTAATCTT+AGG | + | Chr2:5998732-5998751 | MsG0280006768.01.T01:CDS | 35.0% | |
| GAAAGAACCAAACTAAGGAT+TGG | - | Chr2:5998872-5998891 | None:intergenic | 35.0% | |
| GTTATTGATGAGAAACCACA+TGG | + | Chr2:5998521-5998540 | MsG0280006768.01.T01:CDS | 35.0% | |
| TACAAGAGATGGCAATGATT+TGG | + | Chr2:5998550-5998569 | MsG0280006768.01.T01:CDS | 35.0% | |
| TAGTCTTCCAATCCTTAGTT+TGG | + | Chr2:5998862-5998881 | MsG0280006768.01.T01:three_prime_UTR | 35.0% | |
| TATTCATCCAAGCTATGAAG+AGG | + | Chr2:5998673-5998692 | MsG0280006768.01.T01:CDS | 35.0% | |
| TCCAAAAGATCCTTCAAAGA+AGG | + | Chr2:5998721-5998740 | MsG0280006768.01.T01:CDS | 35.0% | |
| TCTCTTGTAAATACACCATG+TGG | - | Chr2:5998539-5998558 | None:intergenic | 35.0% | |
| TGTCTAGTAATAGAGTCCAT+AGG | + | Chr2:5997951-5997970 | MsG0280006768.01.T01:intron | 35.0% | |
| TTTCTTCAACTCTTCTTCTG+TGG | - | Chr2:5997013-5997032 | None:intergenic | 35.0% | |
| ! | AATTTGGTTCAGTATGGTAG+AGG | + | Chr2:5998197-5998216 | MsG0280006768.01.T01:intron | 35.0% |
| ! | ATTTGGTTCAGTATGGTAGA+GGG | + | Chr2:5998198-5998217 | MsG0280006768.01.T01:intron | 35.0% |
| ! | CAGTTCAATTTGGTTCAGTA+TGG | + | Chr2:5998191-5998210 | MsG0280006768.01.T01:intron | 35.0% |
| ! | GTTGTGATGATTTTGCTGAA+TGG | - | Chr2:5996936-5996955 | None:intergenic | 35.0% |
| ! | TCAGCGTCTTTCTTATTTGA+GGG | - | Chr2:5997078-5997097 | None:intergenic | 35.0% |
| ! | TTCCTCAACCTCAATTTTGA+AGG | - | Chr2:5998954-5998973 | None:intergenic | 35.0% |
| ! | TTGTGTTCAACACATTGGTT+TGG | + | Chr2:5998249-5998268 | MsG0280006768.01.T01:intron | 35.0% |
| !! | AGGTTTTGTGTTCAACACAT+TGG | + | Chr2:5998244-5998263 | MsG0280006768.01.T01:intron | 35.0% |
| AAACATTCCACCAAAGGATC+TGG | - | Chr2:5997496-5997515 | None:intergenic | 40.0% | |
| ACATTCTTCCAAAGTGGAGA+TGG | + | Chr2:5997354-5997373 | MsG0280006768.01.T01:CDS | 40.0% | |
| AGATCCTTTGGTGGAATGTT+TGG | + | Chr2:5997495-5997514 | MsG0280006768.01.T01:CDS | 40.0% | |
| AGATCTGCTGGTATCACATT+TGG | - | Chr2:5998494-5998513 | None:intergenic | 40.0% | |
| AGTCTTGAGGAGCTCTATAA+AGG | + | Chr2:5997615-5997634 | MsG0280006768.01.T01:CDS | 40.0% | |
| ATCACAACGCAAGAAAACCA+TGG | + | Chr2:5996948-5996967 | MsG0280006768.01.T01:exon | 40.0% | |
| ATCGAAAACTTGCCATGAAG+TGG | + | Chr2:5997037-5997056 | MsG0280006768.01.T01:CDS | 40.0% | |
| ATGGAGAAGAAGGGCTTAAA+GGG | + | Chr2:5997295-5997314 | MsG0280006768.01.T01:CDS | 40.0% | |
| CACAAACATCAGACATGACA+CGG | + | Chr2:5998018-5998037 | MsG0280006768.01.T01:intron | 40.0% | |
| CACCTTCAAAATTGAGGTTG+AGG | + | Chr2:5998949-5998968 | MsG0280006768.01.T01:three_prime_UTR | 40.0% | |
| CTCAAATAAGAAAGACGCTG+AGG | + | Chr2:5997077-5997096 | MsG0280006768.01.T01:CDS | 40.0% | |
| GAAGAGGTTATTCCAAAGGA+AGG | + | Chr2:5998689-5998708 | MsG0280006768.01.T01:CDS | 40.0% | |
| GGAATAACCTCTTCATAGCT+TGG | - | Chr2:5998683-5998702 | None:intergenic | 40.0% | |
| GGATTGAACCTAAACGTTGT+TGG | - | Chr2:5997381-5997400 | None:intergenic | 40.0% | |
| GTCTTGAGGAGCTCTATAAA+GGG | + | Chr2:5997616-5997635 | MsG0280006768.01.T01:CDS | 40.0% | |
| GTTGCACACCTTCAAAATTG+AGG | + | Chr2:5998943-5998962 | MsG0280006768.01.T01:three_prime_UTR | 40.0% | |
| GTTGCTCATTTCCTTTCTCA+GGG | - | Chr2:5998472-5998491 | None:intergenic | 40.0% | |
| TAGATGATGAAGCACAGACA+CGG | + | Chr2:5997994-5998013 | MsG0280006768.01.T01:intron | 40.0% | |
| TATGGAGAAGAAGGGCTTAA+AGG | + | Chr2:5997294-5997313 | MsG0280006768.01.T01:CDS | 40.0% | |
| TCACAACGCAAGAAAACCAT+GGG | + | Chr2:5996949-5996968 | MsG0280006768.01.T01:exon | 40.0% | |
| TGAATGCATTGGATCCACTA+CGG | - | Chr2:5998830-5998849 | None:intergenic | 40.0% | |
| TTGAACACAAAACCTACCGA+AGG | - | Chr2:5998239-5998258 | None:intergenic | 40.0% | |
| TTGACTTCTGAGCAGAAAGT+TGG | + | Chr2:5998785-5998804 | MsG0280006768.01.T01:CDS | 40.0% | |
| ! | AGAGATATCTGAAGCCTATG+AGG | + | Chr2:5997110-5997129 | MsG0280006768.01.T01:CDS | 40.0% |
| ! | CTCAGCGTCTTTCTTATTTG+AGG | - | Chr2:5997079-5997098 | None:intergenic | 40.0% |
| ! | TAGATTGCCTTGTAGTCTTG+AGG | + | Chr2:5997602-5997621 | MsG0280006768.01.T01:CDS | 40.0% |
| ! | TCACTAGCAGAAGCTTTAAC+AGG | + | Chr2:5998590-5998609 | MsG0280006768.01.T01:CDS | 40.0% |
| !! | CCCTTCTTTGAAGGATCTTT+TGG | - | Chr2:5998725-5998744 | None:intergenic | 40.0% |
| ACAACGCAAGAAAACCATGG+GGG | + | Chr2:5996951-5996970 | MsG0280006768.01.T01:exon | 45.0% | |
| ACCACCAAACATTCCACCAA+AGG | - | Chr2:5997502-5997521 | None:intergenic | 45.0% | |
| AGGGAAATTGCAGATGCAAG+TGG | + | Chr2:5997663-5997682 | MsG0280006768.01.T01:CDS | 45.0% | |
| AGTCAAACCAGGGTGGAAAA+AGG | + | Chr2:5998430-5998449 | MsG0280006768.01.T01:CDS | 45.0% | |
| CAATTGAAGTCAAACCAGGG+TGG | + | Chr2:5998423-5998442 | MsG0280006768.01.T01:CDS | 45.0% | |
| CACAACGCAAGAAAACCATG+GGG | + | Chr2:5996950-5996969 | MsG0280006768.01.T01:exon | 45.0% | |
| GAGATGGACCAACAACGTTT+AGG | + | Chr2:5997370-5997389 | MsG0280006768.01.T01:CDS | 45.0% | |
| GGAATAGGCATACCTTCCTT+TGG | - | Chr2:5998704-5998723 | None:intergenic | 45.0% | |
| GGGAAATTGCAGATGCAAGT+GGG | + | Chr2:5997664-5997683 | MsG0280006768.01.T01:CDS | 45.0% | |
| GGTTGCTCATTTCCTTTCTC+AGG | - | Chr2:5998473-5998492 | None:intergenic | 45.0% | |
| GGTTGTTGCGATGGTTTGAA+AGG | - | Chr2:5996915-5996934 | None:intergenic | 45.0% | |
| GTCAAACCAGGGTGGAAAAA+GGG | + | Chr2:5998431-5998450 | MsG0280006768.01.T01:CDS | 45.0% | |
| TAGAGCTCCTCAAGACTACA+AGG | - | Chr2:5997612-5997631 | None:intergenic | 45.0% | |
| TCCTTTGGTGGAATGTTTGG+TGG | + | Chr2:5997498-5997517 | MsG0280006768.01.T01:CDS | 45.0% | |
| TTGCAGCAAAACTATGCCAG+TGG | + | Chr2:5998388-5998407 | MsG0280006768.01.T01:intron | 45.0% | |
| TTGCTGAATGGTTGTTGCGA+TGG | - | Chr2:5996924-5996943 | None:intergenic | 45.0% | |
| TTGTTGGTCCATCTCCACTT+TGG | - | Chr2:5997365-5997384 | None:intergenic | 45.0% | |
| ! | TTTGTTCCCTTTTTCCACCC+TGG | - | Chr2:5998440-5998459 | None:intergenic | 45.0% |
| AAGACAACGAGTCCTTCGGT+AGG | + | Chr2:5998224-5998243 | MsG0280006768.01.T01:intron | 50.0% | |
| ACACGGACACTCCTAGGATT+AGG | - | Chr2:5998140-5998159 | None:intergenic | 50.0% | |
| AGAAACTTCTGGCACCGTAG+TGG | + | Chr2:5998813-5998832 | MsG0280006768.01.T01:CDS | 50.0% | |
| CACTGTTCGTCTCACAACAC+TGG | + | Chr2:5998616-5998635 | MsG0280006768.01.T01:CDS | 50.0% | |
| CAGCAAAACTATGCCAGTGG+AGG | + | Chr2:5998391-5998410 | MsG0280006768.01.T01:intron | 50.0% | |
| CTTGTAGTAGTCTACCCCCA+TGG | - | Chr2:5996968-5996987 | None:intergenic | 50.0% | |
| GACCAAGACAACGAGTCCTT+CGG | + | Chr2:5998220-5998239 | MsG0280006768.01.T01:intron | 50.0% | |
| GGGGCTACATTCTTCCAAAG+TGG | + | Chr2:5997348-5997367 | MsG0280006768.01.T01:CDS | 50.0% | |
| GTTCGTCTCACAACACTGGA+TGG | + | Chr2:5998620-5998639 | MsG0280006768.01.T01:CDS | 50.0% | |
| TACCGAAGGACTCGTTGTCT+TGG | - | Chr2:5998225-5998244 | None:intergenic | 50.0% | |
| TCCTAGGATTAGGTGTGTCG+CGG | - | Chr2:5998130-5998149 | None:intergenic | 50.0% | |
| TCGGGTATTCAAGCCCGTTT+GGG | + | Chr2:5997433-5997452 | MsG0280006768.01.T01:CDS | 50.0% | |
| TCTCACAACACTGGATGGCA+GGG | + | Chr2:5998625-5998644 | MsG0280006768.01.T01:CDS | 50.0% | |
| TGCTCAGAAGTCAACCTTGC+TGG | - | Chr2:5998779-5998798 | None:intergenic | 50.0% | |
| TTCGGGTATTCAAGCCCGTT+TGG | + | Chr2:5997432-5997451 | MsG0280006768.01.T01:CDS | 50.0% | |
| !! | CTTATCAGGGTGCCACTTCA+TGG | - | Chr2:5997052-5997071 | None:intergenic | 50.0% |
| ACCGCGACACACCTAATCCT+AGG | + | Chr2:5998126-5998145 | MsG0280006768.01.T01:intron | 55.0% | |
| ACCTCAAGATGCTTCTGGCG+GGG | + | Chr2:5997329-5997348 | MsG0280006768.01.T01:CDS | 55.0% | |
| AGAGGTGGAGCCAGATCCTT+TGG | + | Chr2:5997483-5997502 | MsG0280006768.01.T01:CDS | 55.0% | |
| CACCTCAAGATGCTTCTGGC+GGG | + | Chr2:5997328-5997347 | MsG0280006768.01.T01:CDS | 55.0% | |
| CCAATGACACGGACACTCCT+AGG | - | Chr2:5998146-5998165 | None:intergenic | 55.0% | |
| CCACCACCTCAAGATGCTTC+TGG | + | Chr2:5997324-5997343 | MsG0280006768.01.T01:CDS | 55.0% | |
| CCACCTCAAGATGCTTCTGG+CGG | + | Chr2:5997327-5997346 | MsG0280006768.01.T01:CDS | 55.0% | |
| CGGGTATTCAAGCCCGTTTG+GGG | + | Chr2:5997434-5997453 | MsG0280006768.01.T01:CDS | 55.0% | |
| GATTAGGTGTGTCGCGGTGT+CGG | - | Chr2:5998124-5998143 | None:intergenic | 55.0% | |
| GCTGGTGGGAATGGAATGAG+AGG | + | Chr2:5997465-5997484 | MsG0280006768.01.T01:CDS | 55.0% | |
| GGGTATTCAAGCCCGTTTGG+GGG | + | Chr2:5997435-5997454 | MsG0280006768.01.T01:CDS | 55.0% | |
| GGTGGGAATGGAATGAGAGG+TGG | + | Chr2:5997468-5997487 | MsG0280006768.01.T01:CDS | 55.0% | |
| GTCTCACAACACTGGATGGC+AGG | + | Chr2:5998624-5998643 | MsG0280006768.01.T01:CDS | 55.0% | |
| TCAAGCCCGTTTGGGGGAAT+GGG | + | Chr2:5997441-5997460 | MsG0280006768.01.T01:CDS | 55.0% | |
| TCAATAGCAGCTGCCTTGCG+AGG | - | Chr2:5997579-5997598 | None:intergenic | 55.0% | |
| TTCAAGCCCGTTTGGGGGAA+TGG | + | Chr2:5997440-5997459 | MsG0280006768.01.T01:CDS | 55.0% | |
| !! | CCAGAAGCATCTTGAGGTGG+TGG | - | Chr2:5997327-5997346 | None:intergenic | 55.0% |
| !! | CCTAGGAGTGTCCGTGTCAT+TGG | + | Chr2:5998143-5998162 | MsG0280006768.01.T01:intron | 55.0% |
| AAGCCCGTTTGGGGGAATGG+GGG | + | Chr2:5997443-5997462 | MsG0280006768.01.T01:CDS | 60.0% | |
| CAAGCCCGTTTGGGGGAATG+GGG | + | Chr2:5997442-5997461 | MsG0280006768.01.T01:CDS | 60.0% | |
| CGAGGACCTTGCTGACGCAT+AGG | - | Chr2:5997561-5997580 | None:intergenic | 60.0% | |
| GCTAGGCCTATGCGTCAGCA+AGG | + | Chr2:5997552-5997571 | MsG0280006768.01.T01:CDS | 60.0% | |
| GGTGGAGCCAGATCCTTTGG+TGG | + | Chr2:5997486-5997505 | MsG0280006768.01.T01:CDS | 60.0% | |
| !! | CCGCCAGAAGCATCTTGAGG+TGG | - | Chr2:5997330-5997349 | None:intergenic | 60.0% |
| CAGCCCCCATTCCCCCAAAC+GGG | - | Chr2:5997449-5997468 | None:intergenic | 65.0% | |
| CCAGCCCCCATTCCCCCAAA+CGG | - | Chr2:5997450-5997469 | None:intergenic | 65.0% | |
| GCGTCAGCAAGGTCCTCGCA+AGG | + | Chr2:5997563-5997582 | MsG0280006768.01.T01:CDS | 65.0% | |
| TTTGGGGGAATGGGGGCTGG+TGG | + | Chr2:5997450-5997469 | MsG0280006768.01.T01:CDS | 65.0% | |
| ! | GGAATGGGGGCTGGTGGGAA+TGG | + | Chr2:5997456-5997475 | MsG0280006768.01.T01:CDS | 65.0% |
| ! | TTGGGGGAATGGGGGCTGGT+GGG | + | Chr2:5997451-5997470 | MsG0280006768.01.T01:CDS | 65.0% |
| !! | GCCCCGCCAGAAGCATCTTG+AGG | - | Chr2:5997333-5997352 | None:intergenic | 65.0% |
| CCGTTTGGGGGAATGGGGGC+TGG | + | Chr2:5997447-5997466 | MsG0280006768.01.T01:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr2 | gene | 5996894 | 5999046 | 5996894 | ID=MsG0280006768.01;Name=MsG0280006768.01 |
| Chr2 | mRNA | 5996894 | 5999046 | 5996894 | ID=MsG0280006768.01.T01;Parent=MsG0280006768.01;Name=MsG0280006768.01.T01;_AED=0.49;_eAED=0.49;_QI=73|1|1|1|1|1|3|214|344 |
| Chr2 | exon | 5996894 | 5997131 | 5996894 | ID=MsG0280006768.01.T01:exon:2442;Parent=MsG0280006768.01.T01 |
| Chr2 | exon | 5997255 | 5997685 | 5997255 | ID=MsG0280006768.01.T01:exon:2443;Parent=MsG0280006768.01.T01 |
| Chr2 | exon | 5998394 | 5999046 | 5998394 | ID=MsG0280006768.01.T01:exon:2444;Parent=MsG0280006768.01.T01 |
| Chr2 | five_prime_UTR | 5996894 | 5996966 | 5996894 | ID=MsG0280006768.01.T01:five_prime_utr;Parent=MsG0280006768.01.T01 |
| Chr2 | CDS | 5996967 | 5997131 | 5996967 | ID=MsG0280006768.01.T01:cds;Parent=MsG0280006768.01.T01 |
| Chr2 | CDS | 5997255 | 5997685 | 5997255 | ID=MsG0280006768.01.T01:cds;Parent=MsG0280006768.01.T01 |
| Chr2 | CDS | 5998394 | 5998832 | 5998394 | ID=MsG0280006768.01.T01:cds;Parent=MsG0280006768.01.T01 |
| Chr2 | three_prime_UTR | 5998833 | 5999046 | 5998833 | ID=MsG0280006768.01.T01:three_prime_utr;Parent=MsG0280006768.01.T01 |
| Gene Sequence |
| Protein sequence |
