AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280006771.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280006771.01.T01 MTR_2g014490 98.300 941 15 1 1 941 1 940 0.0 1911
MsG0280006771.01.T01 MTR_2g014490 97.062 953 15 2 1 941 1 952 0.0 1901
MsG0280006771.01.T01 MTR_4g088375 68.716 911 223 15 29 934 20 873 0.0 1066
MsG0280006771.01.T01 MTR_4g088375 66.520 911 209 15 29 934 20 839 0.0 1009
MsG0280006771.01.T01 MTR_4g088375 66.520 911 209 15 29 934 20 839 0.0 1009
MsG0280006771.01.T01 MTR_4g078860 53.002 866 351 14 37 876 16 851 0.0 792
MsG0280006771.01.T01 MTR_4g078860 53.002 866 351 14 37 876 16 851 0.0 791
MsG0280006771.01.T01 MTR_4g088375 69.552 670 154 9 265 934 1 620 0.0 791
MsG0280006771.01.T01 MTR_4g078860 53.002 866 351 14 37 876 16 851 0.0 790
MsG0280006771.01.T01 MTR_4g078860 52.134 867 331 13 37 876 16 825 0.0 780
MsG0280006771.01.T01 MTR_5g089870 51.724 58 28 0 42 99 20 77 2.79e-12 70.9
MsG0280006771.01.T01 MTR_3g045830 50.909 55 27 0 43 97 21 75 2.26e-11 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280006771.01.T01 AT1G28420 57.371 875 310 10 34 887 33 865 0.0 856
MsG0280006771.01.T01 AT5G44180 52.737 895 370 16 38 924 15 864 0.0 818
MsG0280006771.01.T01 AT5G44180 52.737 895 370 16 38 924 15 864 0.0 817
MsG0280006771.01.T01 AT5G44180 52.737 895 370 16 38 924 15 864 0.0 817
MsG0280006771.01.T01 AT4G12750 30.518 367 195 6 472 820 236 560 1.77e-34 143
MsG0280006771.01.T01 AT4G03250 47.368 57 30 0 43 99 22 78 3.33e-11 67.4

Find 262 sgRNAs with CRISPR-Local

Find 392 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGGGAAGATGGACCTATTT+TGG 0.114913 2:-6012330 MsG0280006771.01.T01:CDS
GGTAAATGTAAAAGAAAATT+TGG 0.144383 2:-6008409 MsG0280006771.01.T01:CDS
TGCAAAACCTTGAATCATTT+AGG 0.150535 2:-6010362 MsG0280006771.01.T01:CDS
TATCGTATTGTACTGAATTT+TGG 0.166943 2:+6008448 None:intergenic
CCTCCATTGGATCGTATAAA+TGG 0.204294 2:+6011508 None:intergenic
AAAATCCAGATATTTGAAAA+TGG 0.211386 2:-6008582 MsG0280006771.01.T01:CDS
GCTAACTGTCGCAAAATTTC+AGG 0.237197 2:+6009347 None:intergenic
TGTGGCTGGTGGTGGAATCT+AGG 0.248903 2:-6013037 MsG0280006771.01.T01:five_prime_UTR
TCAAACTCAATTCCCAAAAT+AGG 0.262702 2:+6012317 None:intergenic
GCAAAACCTTGAATCATTTA+GGG 0.269120 2:-6010361 MsG0280006771.01.T01:CDS
TTCAGTACAATACGATAATA+TGG 0.270327 2:-6008442 MsG0280006771.01.T01:CDS
CCCGCAAGACCGTGTCATTA+TGG 0.284189 2:+6011169 None:intergenic
CTTTGAGTTCCATGAATTCT+AGG 0.284781 2:+6011441 None:intergenic
GCGAAAGGCGCCACCTTTGC+TGG 0.285441 2:-6012558 MsG0280006771.01.T01:CDS
ACAAATTCATCAAGAGTAAA+AGG 0.289180 2:+6009808 None:intergenic
TTTCTTCATCCTTATTTCAT+AGG 0.291487 2:+6010980 None:intergenic
AAAGGGAGGAGGGGAAGTAT+AGG 0.295610 2:+6011368 None:intergenic
CATTGCCACCTGATGCATTT+GGG 0.298482 2:-6012292 MsG0280006771.01.T01:CDS
GCTGCAAATTTAACTGTTCC+TGG 0.298642 2:+6008920 None:intergenic
CGATAATATGGATATTAGTT+TGG 0.298752 2:-6008430 MsG0280006771.01.T01:CDS
CTGGAGCCTTGTAATGAATA+TGG 0.303206 2:-6012500 MsG0280006771.01.T01:CDS
TTCGGAACAAACGGATATTC+AGG 0.304623 2:+6011576 None:intergenic
TTTGTCAGAAATCTGGTCTT+CGG 0.307184 2:-6008764 MsG0280006771.01.T01:intron
ACAACACAACACAATAATTA+AGG 0.310800 2:+6013092 None:intergenic
GGGGCTTTGACATACGAAAT+TGG 0.313114 2:-6009397 MsG0280006771.01.T01:CDS
CTCTAGTACATTCAAACCTT+TGG 0.314270 2:+6008871 None:intergenic
CCATTGCCACCTGATGCATT+TGG 0.314663 2:-6012293 MsG0280006771.01.T01:CDS
TATGGATCCGGGTCAGGTTC+TGG 0.318902 2:-6012482 MsG0280006771.01.T01:CDS
GCCTAATCCTAAGTTGATTC+TGG 0.321806 2:-6012519 MsG0280006771.01.T01:CDS
CCATAATGACACGGTCTTGC+GGG 0.321838 2:-6011169 MsG0280006771.01.T01:CDS
CAATTTGGTGATCAGTGAAT+TGG 0.322334 2:+6011235 None:intergenic
ATGCCAGTATTGGCTACGTT+TGG 0.327923 2:+6011264 None:intergenic
TTAGCACTATCTGCAGGATT+TGG 0.331449 2:-6009329 MsG0280006771.01.T01:CDS
TCTAGTACATTCAAACCTTT+GGG 0.336654 2:+6008872 None:intergenic
CAATTCACTGATCACCAAAT+TGG 0.337621 2:-6011234 MsG0280006771.01.T01:CDS
CTTTCTTGCTTCTGAAAGAA+TGG 0.337761 2:+6008605 None:intergenic
TGATGCTTCAGGTGTCTTGC+TGG 0.339404 2:+6008731 None:intergenic
AAGGGAGGAGGGGAAGTATA+GGG 0.340484 2:+6011369 None:intergenic
GTTTGGGTGAGGTTCCCTTT+TGG 0.343559 2:+6011281 None:intergenic
CTTGTCCTGCTGAGACAAAA+AGG 0.347365 2:+6011350 None:intergenic
GGATGAACAGTTAGAATTGA+TGG 0.347580 2:-6010442 MsG0280006771.01.T01:CDS
CAGGATTAGCAGCTCCATTC+TGG 0.350464 2:+6009558 None:intergenic
TTTACTAAATCATCGTCTTC+AGG 0.352624 2:+6008486 None:intergenic
GCAAAGTATCAAGATCAATA+TGG 0.353463 2:+6010382 None:intergenic
ACATGAAGTTAGAACGAATA+AGG 0.359766 2:-6011766 MsG0280006771.01.T01:intron
CTCTAGCCCGTTTGCCCGGA+TGG 0.360683 2:-6012459 MsG0280006771.01.T01:CDS
GTAAATGTAAAAGAAAATTT+GGG 0.361916 2:-6008408 MsG0280006771.01.T01:CDS
CAAGCATTTCAAGTTGAAAA+GGG 0.369118 2:+6012832 None:intergenic
GAACATCTACCTAGAATTCA+TGG 0.369626 2:-6011450 MsG0280006771.01.T01:CDS
CAGGTGTCTTGCTGGTTGTC+AGG 0.370707 2:+6008739 None:intergenic
GCTTGTGTGGAGGCACAGTT+AGG 0.371831 2:-6012362 MsG0280006771.01.T01:CDS
AGCATTAGATCTGATATGTT+TGG 0.372492 2:-6011546 MsG0280006771.01.T01:CDS
AACAACAAGATTATGAGTTC+AGG 0.378782 2:-6012891 MsG0280006771.01.T01:CDS
TCAAGCATTTCAAGTTGAAA+AGG 0.381169 2:+6012831 None:intergenic
TTGCTGATGCTCTTGAGTTA+TGG 0.383282 2:-6009831 MsG0280006771.01.T01:CDS
TTCAACTTCCTTGGCAACTC+TGG 0.388626 2:+6011004 None:intergenic
GCCTTTCGCACCTTCTTAAC+CGG 0.392579 2:+6012572 None:intergenic
CACCCAAACGTAGCCAATAC+TGG 0.393589 2:-6011267 MsG0280006771.01.T01:CDS
AAGTTGAAGCCTATGAAATA+AGG 0.393643 2:-6010989 MsG0280006771.01.T01:CDS
TTGTCAGAAATCTGGTCTTC+GGG 0.399774 2:-6008763 MsG0280006771.01.T01:intron
GTCTGAGAAGTTGGGGTTGT+CGG 0.401007 2:-6012651 MsG0280006771.01.T01:CDS
GATAGAGCTGTCTGAGAAGT+TGG 0.402849 2:-6012660 MsG0280006771.01.T01:CDS
TGCCAGTATTGGCTACGTTT+GGG 0.402993 2:+6011265 None:intergenic
CTCAACTCCATCCGGGCAAA+CGG 0.403462 2:+6012452 None:intergenic
AGAGCTTGCAGAGAAGATTC+AGG 0.403864 2:-6008852 MsG0280006771.01.T01:intron
TTCATAGGCTTCAACTTCCT+TGG 0.404823 2:+6010995 None:intergenic
CACAGTTAGGGGAGCCTTTG+AGG 0.409127 2:-6012349 MsG0280006771.01.T01:CDS
GCAACAGAAATTGATGCTTC+AGG 0.411135 2:+6008720 None:intergenic
CTCCATTGGATCGTATAAAT+GGG 0.412703 2:+6011509 None:intergenic
AAATCCAGATATTTGAAAAT+GGG 0.416183 2:-6008581 MsG0280006771.01.T01:CDS
ATAACAGGATTCAAGATTGT+TGG 0.421418 2:-6009666 MsG0280006771.01.T01:intron
CTTACTCCTTCCACAATCTC+TGG 0.424952 2:+6009524 None:intergenic
CCTTCTTGTCTTTCAACCTC+CGG 0.426074 2:+6012600 None:intergenic
ATCTTGTTCTGAGTTGATCC+AGG 0.426673 2:+6010179 None:intergenic
GCCCACCCCTAAATGATTCA+AGG 0.426677 2:+6010355 None:intergenic
GTGGCTGGTGGTGGAATCTA+GGG 0.430545 2:-6013036 MsG0280006771.01.T01:five_prime_UTR
AGGACACCTTCTACAGGATT+AGG 0.432054 2:-6009587 MsG0280006771.01.T01:CDS
TGAGTCACCACAGACTATAA+TGG 0.432221 2:-6012399 MsG0280006771.01.T01:CDS
GATGCATTTGGGGCACCCTT+AGG 0.436957 2:-6012281 MsG0280006771.01.T01:intron
CTGGCTCTAGCCCGTTTGCC+CGG 0.438216 2:-6012463 MsG0280006771.01.T01:CDS
ATAGAGCTGTCTGAGAAGTT+GGG 0.440544 2:-6012659 MsG0280006771.01.T01:CDS
CTCTCTCTTGAGGGCCCCAA+AGG 0.443347 2:-6008887 MsG0280006771.01.T01:CDS
AGTGGGACAATCGGCATCCT+TGG 0.443570 2:+6008317 None:intergenic
GATCTAATGCTAGGCTGGTT+CGG 0.444716 2:+6011558 None:intergenic
GTCATTTCTACACTTCGTAA+TGG 0.445805 2:-6009022 MsG0280006771.01.T01:CDS
TAACAGGATTCAAGATTGTT+GGG 0.450234 2:-6009665 MsG0280006771.01.T01:intron
ATGTTCCTCTGACTCGACTT+TGG 0.450953 2:+6013600 None:intergenic
TGGAATCTAGGGTTTGAAAA+GGG 0.452363 2:-6013025 MsG0280006771.01.T01:five_prime_UTR
TTTCACGTTCTCTCTCTTGA+GGG 0.452612 2:-6008896 MsG0280006771.01.T01:CDS
TCCAGAATCAACTTAGGATT+AGG 0.453084 2:+6012518 None:intergenic
TGCTCGCCTATCGTCTCAAC+AGG 0.460161 2:-6011406 MsG0280006771.01.T01:CDS
GAAAGACAAGAAGGAGTTAC+CGG 0.460260 2:-6012591 MsG0280006771.01.T01:CDS
TTCACTCCTAATCCTGTAGA+AGG 0.460448 2:+6009581 None:intergenic
CCTTGTAATGAATATGGATC+CGG 0.461257 2:-6012494 MsG0280006771.01.T01:CDS
CTCTTCTTTATCATTTGCAC+AGG 0.461315 2:+6009274 None:intergenic
CCACATTCCTCAACTCCATC+CGG 0.462105 2:+6012444 None:intergenic
TGTTCATTTCCAATCGGAAA+AGG 0.464769 2:+6011468 None:intergenic
AATTCCCAGAAGGGTGATGA+TGG 0.465278 2:-6012954 MsG0280006771.01.T01:CDS
AGAGCGAATGAGGAAAGAAA+TGG 0.466756 2:-6010821 MsG0280006771.01.T01:CDS
GGGGAGCCTTTGAGGGAAGA+TGG 0.471128 2:-6012341 MsG0280006771.01.T01:CDS
ATTTCACGTTCTCTCTCTTG+AGG 0.472406 2:-6008897 MsG0280006771.01.T01:CDS
ATAATGATGTTGTCCCCAAA+AGG 0.473532 2:-6011296 MsG0280006771.01.T01:CDS
TTTGAAAATGGGTTTCTAGC+TGG 0.474564 2:-6008570 MsG0280006771.01.T01:CDS
TTGGGAGTTAATGCCAGTAT+TGG 0.475841 2:+6011254 None:intergenic
TTCAGTGGAGACATATCCTT+CGG 0.476034 2:-6012693 MsG0280006771.01.T01:intron
AATTTGGTGATCAGTGAATT+GGG 0.476491 2:+6011236 None:intergenic
GGAGTTGGCTGCAGCAAGCA+AGG 0.477151 2:-6010421 MsG0280006771.01.T01:CDS
CAAGGCTCCAGAATCAACTT+AGG 0.477610 2:+6012512 None:intergenic
ATCCAGGGCTGGATAGCAAA+TGG 0.482139 2:+6010195 None:intergenic
ATCTCGAGGAGGAGATGGAT+AGG 0.483354 2:+6011317 None:intergenic
TGCTTCTGAAAGAATGGACT+CGG 0.484032 2:+6008611 None:intergenic
ACAGTTAGGGGAGCCTTTGA+GGG 0.484591 2:-6012348 MsG0280006771.01.T01:CDS
AGAATAATTATGAAAGGTGT+TGG 0.485128 2:-6013374 MsG0280006771.01.T01:five_prime_UTR
AAAAGAATAATAATAATTAA+CGG 0.486539 2:+6013195 None:intergenic
ACAAGATATCTTAAGAAGAA+AGG 0.487110 2:-6010946 MsG0280006771.01.T01:intron
TCAACTCCATCCGGGCAAAC+GGG 0.488294 2:+6012453 None:intergenic
TCTGTTGCTTTGACAAGAGA+TGG 0.488492 2:-6008705 MsG0280006771.01.T01:CDS
AATGAATATGGATCCGGGTC+AGG 0.490132 2:-6012488 MsG0280006771.01.T01:CDS
GCATCCTTGGAACCATTCTC+AGG 0.491609 2:+6008330 None:intergenic
GTTCGTACACGATATGTTGA+TGG 0.491663 2:+6008660 None:intergenic
AGAATGGACTCGGCATCTGC+AGG 0.492692 2:+6008621 None:intergenic
ATCTCTGGATGGCCACCGGC+AGG 0.495742 2:+6009539 None:intergenic
TATCAGATCTAATGCTAGGC+TGG 0.497086 2:+6011553 None:intergenic
AGAGAAGGAAGGAAGAAGAA+AGG 0.499621 2:-6010783 MsG0280006771.01.T01:CDS
TCCATAATGACACGGTCTTG+CGG 0.499702 2:-6011170 MsG0280006771.01.T01:CDS
AAGATCAATATGGATGATAG+AGG 0.501592 2:+6010392 None:intergenic
AAGGGTGCCCCAAATGCATC+AGG 0.501705 2:+6012284 None:intergenic
AGAGATTCGCAAAGAGAAAG+AGG 0.502023 2:-6010538 MsG0280006771.01.T01:CDS
AAGGAAAGCTGCCCTTGAAA+AGG 0.504701 2:-6010508 MsG0280006771.01.T01:CDS
CGACAGTTAGCACTATCTGC+AGG 0.505764 2:-6009335 MsG0280006771.01.T01:CDS
GATGACAGAAGTGGGACAAT+CGG 0.510133 2:+6008308 None:intergenic
ATAGGCGAGCACGGGAAGAA+TGG 0.511735 2:+6011418 None:intergenic
TTCTTCTCTTTCAACATCAA+CGG 0.512077 2:+6008539 None:intergenic
CCGGATCCATATTCATTACA+AGG 0.514192 2:+6012494 None:intergenic
ATTGCCACCTGATGCATTTG+GGG 0.514938 2:-6012291 MsG0280006771.01.T01:CDS
CGTAGAATGAAGAGCGAATG+AGG 0.516219 2:-6010831 MsG0280006771.01.T01:intron
GTGGAATCTAGGGTTTGAAA+AGG 0.516745 2:-6013026 MsG0280006771.01.T01:five_prime_UTR
CTAGGCTGGTTCGGAACAAA+CGG 0.517085 2:+6011567 None:intergenic
TATTAATAAAGGCTGAGAAA+AGG 0.518452 2:-6010572 MsG0280006771.01.T01:intron
GGGGAAGTATAGGGAGTCAC+AGG 0.521596 2:+6011378 None:intergenic
GTTCTGAGTTGATCCAGGGC+TGG 0.522243 2:+6010184 None:intergenic
TTTATCATTTGCACAGGACC+AGG 0.522278 2:+6009280 None:intergenic
TGTCCACCAGGTAAAGCTAA+AGG 0.524247 2:+6011198 None:intergenic
GGAATCTAGGGTTTGAAAAG+GGG 0.525170 2:-6013024 MsG0280006771.01.T01:five_prime_UTR
TCATTATCTCGAGGAGGAGA+TGG 0.525718 2:+6011312 None:intergenic
CTTGTGTGGAGGCACAGTTA+GGG 0.526600 2:-6012361 MsG0280006771.01.T01:CDS
GAAAATCCTTTAGCTTTACC+TGG 0.531273 2:-6011204 MsG0280006771.01.T01:CDS
TAGAATAGCTAAAGAGTCTA+CGG 0.531468 2:-6010475 MsG0280006771.01.T01:CDS
GTTGCAAGGACACCTTCTAC+AGG 0.531536 2:-6009593 MsG0280006771.01.T01:CDS
AACCATTTGCTATCCAGCCC+TGG 0.532632 2:-6010197 MsG0280006771.01.T01:CDS
ATAATTATGAAAGGTGTTGG+TGG 0.532731 2:-6013371 MsG0280006771.01.T01:five_prime_UTR
AATCGGAAAAGGAGGAGTTC+TGG 0.534753 2:+6011479 None:intergenic
CTCCATTGCAGGCAATGGCA+AGG 0.537404 2:-6011605 MsG0280006771.01.T01:intron
GGTAGATGTTCATTTCCAAT+CGG 0.538274 2:+6011462 None:intergenic
CCAAATGCATCAGGTGGCAA+TGG 0.540389 2:+6012293 None:intergenic
GAAGGAGTTACCGGTTAAGA+AGG 0.540575 2:-6012582 MsG0280006771.01.T01:CDS
AAGAGAAAGAGGCAGAGAGA+AGG 0.542103 2:-6010527 MsG0280006771.01.T01:CDS
TTCACTGATCACCAAATTGG+TGG 0.543758 2:-6011231 MsG0280006771.01.T01:CDS
GTTCTGGCAGGACCCTCCAT+TGG 0.544427 2:+6011495 None:intergenic
CGTTTGCCCGGATGGAGTTG+AGG 0.544889 2:-6012451 MsG0280006771.01.T01:CDS
GTATTGGCTACGTTTGGGTG+AGG 0.545600 2:+6011270 None:intergenic
AAGAAAGGATGATGCGTGAG+AGG 0.547193 2:-6010768 MsG0280006771.01.T01:CDS
GGTGACTCATAATAACTCCT+TGG 0.549115 2:+6012413 None:intergenic
GGATTAGGAGTGAACCAGAA+TGG 0.551830 2:-6009572 MsG0280006771.01.T01:CDS
TTACTGTCGTAGGCAAGACT+AGG 0.551843 2:+6011801 None:intergenic
ATTCCCAGAAGGGTGATGAT+GGG 0.552822 2:-6012953 MsG0280006771.01.T01:CDS
GAGTTGGCTGCAGCAAGCAA+GGG 0.553572 2:-6010420 MsG0280006771.01.T01:CDS
GACTCATAATAACTCCTTGG+AGG 0.553883 2:+6012416 None:intergenic
AACCTATGTCTCGATCTTCG+AGG 0.553945 2:+6008947 None:intergenic
TAATGATGTTGTCCCCAAAA+GGG 0.555094 2:-6011295 MsG0280006771.01.T01:CDS
TCGGAACAAACGGATATTCA+GGG 0.555690 2:+6011577 None:intergenic
GATTGAAGCGTGAGCAAAGG+CGG 0.560756 2:-6010729 MsG0280006771.01.T01:CDS
TGTTGAAAGAGAAGAAGAGT+CGG 0.560811 2:-6008532 MsG0280006771.01.T01:CDS
CTGTTGCAGAACAGCAGAAG+CGG 0.560950 2:-6011824 MsG0280006771.01.T01:CDS
CACAATCTCTGGATGGCCAC+CGG 0.561415 2:+6009535 None:intergenic
TTGAGACGATAGGCGAGCAC+GGG 0.564587 2:+6011410 None:intergenic
TTTATGTTAGGCATATACAT+GGG 0.567216 2:-6009417 MsG0280006771.01.T01:intron
GATTTAGTAAATCCTTCAAG+TGG 0.569152 2:-6008474 MsG0280006771.01.T01:CDS
TGTACGAACTGCATTTAGAC+AGG 0.572915 2:-6008646 MsG0280006771.01.T01:CDS
TCTCGAGGAGGAGATGGATA+GGG 0.573399 2:+6011318 None:intergenic
TCTATCCTTGTTGTCTCCGA+AGG 0.573578 2:+6012677 None:intergenic
AAAAGAAGAATAATTATGAA+AGG 0.573763 2:-6013380 MsG0280006771.01.T01:five_prime_UTR
ATTGAAGCGTGAGCAAAGGC+GGG 0.573861 2:-6010728 MsG0280006771.01.T01:CDS
TTGTAACTGCAGGGAAGAAG+TGG 0.574009 2:-6009052 MsG0280006771.01.T01:intron
AAAGGCTAGATCGTGAGAGA+AGG 0.577153 2:-6010798 MsG0280006771.01.T01:CDS
TCGAGACATAGGTTAACTCC+AGG 0.579279 2:-6008938 MsG0280006771.01.T01:CDS
ACAGTTAGAATTGATGGAGT+TGG 0.580281 2:-6010436 MsG0280006771.01.T01:CDS
GTTGAGACGATAGGCGAGCA+CGG 0.580372 2:+6011409 None:intergenic
CGGTGGCCATCCAGAGATTG+TGG 0.581934 2:-6009534 MsG0280006771.01.T01:CDS
TTCCCAGAAGGGTGATGATG+GGG 0.582040 2:-6012952 MsG0280006771.01.T01:CDS
AACATATCAGATCTAATGCT+AGG 0.582335 2:+6011549 None:intergenic
TTGTGTGGAGGCACAGTTAG+GGG 0.582443 2:-6012360 MsG0280006771.01.T01:CDS
CACATTCCTCAACTCCATCC+GGG 0.583117 2:+6012445 None:intergenic
GCTTAGAGCAATTGCTTGTG+TGG 0.583221 2:-6012375 MsG0280006771.01.T01:CDS
CTCCTTCCACAATCTCTGGA+TGG 0.585762 2:+6009528 None:intergenic
ACCCCATTTATACGATCCAA+TGG 0.586523 2:-6011511 MsG0280006771.01.T01:CDS
CTCCTCGAAGATCGAGACAT+AGG 0.586525 2:-6008949 MsG0280006771.01.T01:CDS
ATAGGTCCATCTTCCCTCAA+AGG 0.587067 2:+6012335 None:intergenic
CAAAACCTTGAATCATTTAG+GGG 0.587289 2:-6010360 MsG0280006771.01.T01:intron
AAGCATTTCAAGTTGAAAAG+GGG 0.587938 2:+6012833 None:intergenic
AATGGAGCTGCTAATCCTGC+CGG 0.588544 2:-6009554 MsG0280006771.01.T01:CDS
CCATTTATACGATCCAATGG+AGG 0.591874 2:-6011508 MsG0280006771.01.T01:CDS
TCTTGTTCTGAGTTGATCCA+GGG 0.591926 2:+6010180 None:intergenic
ATCAACTCAGAACAAGATGT+TGG 0.592070 2:-6010174 MsG0280006771.01.T01:CDS
GGAAAAGGAGGAGTTCTGGC+AGG 0.594733 2:+6011483 None:intergenic
AGATGTTGGCAATCTTCTCA+TGG 0.595503 2:-6010160 MsG0280006771.01.T01:intron
TGACGATGCCAGAGTTGCCA+AGG 0.595709 2:-6011012 MsG0280006771.01.T01:CDS
GCAGAGAATAATTCCCAGAA+GGG 0.596544 2:-6012963 MsG0280006771.01.T01:CDS
CGGATCGACAGTTACAGATG+TGG 0.596696 2:-6012631 MsG0280006771.01.T01:CDS
CTTGTAATGAATATGGATCC+GGG 0.597441 2:-6012493 MsG0280006771.01.T01:CDS
GCTTGTCCTGTTGAGACGAT+AGG 0.597986 2:+6011400 None:intergenic
CTAAGCTCCATTATAGTCTG+TGG 0.598730 2:+6012392 None:intergenic
AGTTGGCTGCAGCAAGCAAG+GGG 0.599292 2:-6010419 MsG0280006771.01.T01:CDS
TTATGGAAAACTTGTCCACC+AGG 0.599861 2:+6011186 None:intergenic
GAACCATTCTCAGGAAAACA+AGG 0.600045 2:+6008339 None:intergenic
TAGAGCTGTCTGAGAAGTTG+GGG 0.600237 2:-6012658 MsG0280006771.01.T01:CDS
TTATGTTAGGCATATACATG+GGG 0.601490 2:-6009416 MsG0280006771.01.T01:intron
ACCGGTTAAGAAGGTGCGAA+AGG 0.603062 2:-6012573 MsG0280006771.01.T01:CDS
GGAATGTGGTGCCTCCTCCA+AGG 0.603095 2:-6012430 MsG0280006771.01.T01:CDS
GCGTGAGAGGCAGAGAGAAG+AGG 0.605131 2:-6010755 MsG0280006771.01.T01:CDS
GCTAGAGCCAGAACCTGACC+CGG 0.605133 2:+6012475 None:intergenic
TAGAGCAATTGCTTGTGTGG+AGG 0.605595 2:-6012372 MsG0280006771.01.T01:CDS
CACATCCAAAGTCGAGTCAG+AGG 0.610680 2:-6013605 MsG0280006771.01.T01:five_prime_UTR
GGCCATCCAGAGATTGTGGA+AGG 0.611302 2:-6009530 MsG0280006771.01.T01:CDS
AGCAGAGAATAATTCCCAGA+AGG 0.615412 2:-6012964 MsG0280006771.01.T01:CDS
AAAGATTGAAGCGTGAGCAA+AGG 0.615457 2:-6010732 MsG0280006771.01.T01:CDS
TCATAATAACTCCTTGGAGG+AGG 0.617069 2:+6012419 None:intergenic
TAATGACACGGTCTTGCGGG+TGG 0.618633 2:-6011166 MsG0280006771.01.T01:CDS
GGAGCTGCTAATCCTGCCGG+TGG 0.618742 2:-6009551 MsG0280006771.01.T01:CDS
CTGTGCAAATGATAAAGAAG+AGG 0.619387 2:-6009273 MsG0280006771.01.T01:intron
CATATCCTTCGGAGACAACA+AGG 0.621717 2:-6012682 MsG0280006771.01.T01:CDS
AATCCTTTAGCTTTACCTGG+TGG 0.623781 2:-6011201 MsG0280006771.01.T01:CDS
TCATTTCCAATCGGAAAAGG+AGG 0.629970 2:+6011471 None:intergenic
GGAAAGCGATGAAGTTGATG+AGG 0.630670 2:-6008511 MsG0280006771.01.T01:CDS
TTCAGCAGCCGTAAGTGCAG+TGG 0.630745 2:-6008999 MsG0280006771.01.T01:CDS
CATTTATACGATCCAATGGA+GGG 0.631045 2:-6011507 MsG0280006771.01.T01:CDS
AAGACATTGAAGATGTTGCA+AGG 0.631865 2:-6009607 MsG0280006771.01.T01:CDS
ATGAATGAAGAATGAATGAA+CGG 0.632344 2:+6013445 None:intergenic
GAATGAGGAAAGAAATGGAA+AGG 0.633242 2:-6010816 MsG0280006771.01.T01:CDS
AAGGCGGGAGATAGAACGAA+GGG 0.634531 2:-6010713 MsG0280006771.01.T01:CDS
GTAGGAGAATCCAGCAAAGG+TGG 0.635408 2:+6012548 None:intergenic
AAGATTATGAGTTCAGGTGA+AGG 0.636764 2:-6012885 MsG0280006771.01.T01:CDS
GCTAGATCGTGAGAGAAGGA+AGG 0.638032 2:-6010794 MsG0280006771.01.T01:CDS
TTAGGATTAGGCTCATGAGT+AGG 0.638513 2:+6012530 None:intergenic
CCGGAGGTTGAAAGACAAGA+AGG 0.646614 2:-6012600 MsG0280006771.01.T01:CDS
CCGGATGGAGTTGAGGAATG+TGG 0.648928 2:-6012444 MsG0280006771.01.T01:CDS
TAACTCAAGAGCATCAGCAA+AGG 0.649265 2:+6009834 None:intergenic
TCCCAGAAGGGTGATGATGG+GGG 0.649850 2:-6012951 MsG0280006771.01.T01:CDS
GGTTGTTTGATGACAGAAGT+GGG 0.651891 2:+6008300 None:intergenic
GGGACAACATCATTATCTCG+AGG 0.657915 2:+6011303 None:intergenic
TCCATTGGATCGTATAAATG+GGG 0.658194 2:+6011510 None:intergenic
AAAGGCGGGAGATAGAACGA+AGG 0.661832 2:-6010714 MsG0280006771.01.T01:CDS
TGAGTAGGAGAATCCAGCAA+AGG 0.670491 2:+6012545 None:intergenic
AGAACTTAAATCAATTGACA+TGG 0.674041 2:-6009370 MsG0280006771.01.T01:CDS
AGAGTCTACGGAGCTCATTG+AGG 0.677792 2:-6010463 MsG0280006771.01.T01:CDS
GGTGCCCCAAATGCATCAGG+TGG 0.681774 2:+6012287 None:intergenic
AGAATAATAATAATTAACGG+TGG 0.683982 2:+6013198 None:intergenic
CTAGTACATTCAAACCTTTG+GGG 0.684269 2:+6008873 None:intergenic
TTTGGGCGGGAAAACACACA+AGG 0.689842 2:+6010236 None:intergenic
GCGGGTGGAGAAGAAACGAA+AGG 0.699282 2:-6011151 MsG0280006771.01.T01:intron
ACAACATCATTATCTCGAGG+AGG 0.702218 2:+6011306 None:intergenic
TGGTTGTTTGATGACAGAAG+TGG 0.745741 2:+6008299 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTAAACTTAATAATAAC+AGG - Chr2:6012227-6012246 MsG0280006771.01.T01:intron 10.0%
!!! TTTGAAATTCTAATTTAAAA+CGG - Chr2:6010279-6010298 MsG0280006771.01.T01:intron 10.0%
!! AAAAGAAGAATAATTATGAA+AGG - Chr2:6008528-6008547 MsG0280006771.01.T01:CDS 15.0%
!! CTTGTGTTATATATTAATAA+AGG - Chr2:6011325-6011344 MsG0280006771.01.T01:CDS 15.0%
!! GTAAATGTAAAAGAAAATTT+GGG - Chr2:6013500-6013519 MsG0280006771.01.T01:five_prime_UTR 15.0%
!! TATATTGTACATTCTATTTA+GGG - Chr2:6009797-6009816 MsG0280006771.01.T01:CDS 15.0%
!! TATTAATATATAACACAAGA+AGG + Chr2:6011324-6011343 None:intergenic 15.0%
!!! TTGAAATTCTAATTTAAAAC+GGG - Chr2:6010280-6010299 MsG0280006771.01.T01:intron 15.0%
!!! TTGTTTTAAGTTTATGATTT+TGG - Chr2:6009154-6009173 MsG0280006771.01.T01:intron 15.0%
!! AAAATCCAGATATTTGAAAA+TGG - Chr2:6013326-6013345 MsG0280006771.01.T01:five_prime_UTR 20.0%
!! AAATCCAGATATTTGAAAAT+GGG - Chr2:6013327-6013346 MsG0280006771.01.T01:five_prime_UTR 20.0%
!! AGAATAATAATAATTAACGG+TGG + Chr2:6008713-6008732 None:intergenic 20.0%
!! ATTCAATAAAGCAATAACAT+GGG + Chr2:6011263-6011282 None:intergenic 20.0%
!! CTTAGTGATATTACATAATT+TGG - Chr2:6011592-6011611 MsG0280006771.01.T01:CDS 20.0%
!! GGTAAATGTAAAAGAAAATT+TGG - Chr2:6013499-6013518 MsG0280006771.01.T01:five_prime_UTR 20.0%
!! GTATATTGTACATTCTATTT+AGG - Chr2:6009796-6009815 MsG0280006771.01.T01:CDS 20.0%
!! TACATTAACTTTGTATTGTT+GGG + Chr2:6010827-6010846 None:intergenic 20.0%
!! TGTTATATATGTACACTATA+AGG + Chr2:6011799-6011818 None:intergenic 20.0%
!! TTACATTAACTTTGTATTGT+TGG + Chr2:6010828-6010847 None:intergenic 20.0%
!!! AAGTTTATGATTTTGGTTAT+GGG - Chr2:6009161-6009180 MsG0280006771.01.T01:intron 20.0%
!!! ACTATTTTTCTTGCAATTTT+TGG - Chr2:6012186-6012205 MsG0280006771.01.T01:intron 20.0%
!!! ATAATTGATAATGAACTAAG+TGG - Chr2:6012821-6012840 MsG0280006771.01.T01:CDS 20.0%
!!! CTGTTATTTTTAGACAAATA+TGG - Chr2:6012430-6012449 MsG0280006771.01.T01:CDS 20.0%
!!! GTATTATCATTTTAGTTTGT+TGG - Chr2:6012699-6012718 MsG0280006771.01.T01:intron 20.0%
!!! TAAGTTTATGATTTTGGTTA+TGG - Chr2:6009160-6009179 MsG0280006771.01.T01:intron 20.0%
!!! TGATTGCAAAATTCTTTTTT+TGG - Chr2:6011827-6011846 MsG0280006771.01.T01:CDS 20.0%
!!! TGTTTTTTTAGCTTAAATTG+AGG - Chr2:6011990-6012009 MsG0280006771.01.T01:intron 20.0%
!!! TTTTGTTTTTGTTTTTTAGC+TGG - Chr2:6008391-6008410 MsG0280006771.01.T01:CDS 20.0%
!!! TTTTTTAGCTTTACACTTTT+GGG + Chr2:6011692-6011711 None:intergenic 20.0%
!!! TTTTTTTAGCTTTACACTTT+TGG + Chr2:6011693-6011712 None:intergenic 20.0%
!!! TTTTTTTTTGTGAATTTCAG+TGG - Chr2:6009200-6009219 MsG0280006771.01.T01:intron 20.0%
! AACATGTCACTATATATTGA+TGG - Chr2:6011002-6011021 MsG0280006771.01.T01:CDS 25.0%
! ACAAATTCATCAAGAGTAAA+AGG + Chr2:6012103-6012122 None:intergenic 25.0%
! ACAACACAACACAATAATTA+AGG + Chr2:6008819-6008838 None:intergenic 25.0%
! ACAAGATATCTTAAGAAGAA+AGG - Chr2:6010962-6010981 MsG0280006771.01.T01:CDS 25.0%
! ACATTAACTTTGTATTGTTG+GGG + Chr2:6010826-6010845 None:intergenic 25.0%
! AGAACTTAAATCAATTGACA+TGG - Chr2:6012538-6012557 MsG0280006771.01.T01:CDS 25.0%
! ATGAATGAAGAATGAATGAA+CGG + Chr2:6008466-6008485 None:intergenic 25.0%
! ATTGATATAATTGTAACGTG+TGG - Chr2:6011916-6011935 MsG0280006771.01.T01:intron 25.0%
! CATGCATGTAAAATCAATAA+TGG - Chr2:6012778-6012797 MsG0280006771.01.T01:intron 25.0%
! CGATAATATGGATATTAGTT+TGG - Chr2:6013478-6013497 MsG0280006771.01.T01:five_prime_UTR 25.0%
! GAAATTTGAAGAAGAAAAGA+AGG + Chr2:6009124-6009143 None:intergenic 25.0%
! GATTCAATAAAGCAATAACA+TGG + Chr2:6011264-6011283 None:intergenic 25.0%
! TAAATGTATTTGTAACTGCA+GGG - Chr2:6012847-6012866 MsG0280006771.01.T01:CDS 25.0%
! TATTAATAAAGGCTGAGAAA+AGG - Chr2:6011336-6011355 MsG0280006771.01.T01:CDS 25.0%
! TGTGAGATAATTATCTAGAT+AGG - Chr2:6010230-6010249 MsG0280006771.01.T01:CDS 25.0%
! TTCAATAAAGCAATAACATG+GGG + Chr2:6011262-6011281 None:intergenic 25.0%
! TTCAGTACAATACGATAATA+TGG - Chr2:6013466-6013485 MsG0280006771.01.T01:five_prime_UTR 25.0%
! TTCTTAGATGTTCTGTATTA+AGG - Chr2:6009895-6009914 MsG0280006771.01.T01:intron 25.0%
! TTTATGTTAGGCATATACAT+GGG - Chr2:6012491-6012510 MsG0280006771.01.T01:CDS 25.0%
!! AGAATAATTATGAAAGGTGT+TGG - Chr2:6008534-6008553 MsG0280006771.01.T01:CDS 25.0%
!! ATAATGCTGTGTTTTATGTT+AGG - Chr2:6012479-6012498 MsG0280006771.01.T01:CDS 25.0%
!! TATCGTATTGTACTGAATTT+TGG + Chr2:6013463-6013482 None:intergenic 25.0%
!! TTTCTTCATCCTTATTTCAT+AGG + Chr2:6010931-6010950 None:intergenic 25.0%
!! TTTTATGTTAGGCATATACA+TGG - Chr2:6012490-6012509 MsG0280006771.01.T01:CDS 25.0%
!!! ATACTTCTTTTTTTCAACTG+TGG + Chr2:6012606-6012625 None:intergenic 25.0%
!!! TGAAAAAAAGAAGTATTACC+TGG - Chr2:6012610-6012629 MsG0280006771.01.T01:CDS 25.0%
!!! TTTCTTTTTTGTCAGAAATC+TGG - Chr2:6013137-6013156 MsG0280006771.01.T01:five_prime_UTR 25.0%
AAAAATTCGATCTTGATCGA+TGG - Chr2:6008914-6008933 MsG0280006771.01.T01:CDS 30.0%
AAAACACAGCATTATTGATG+TGG + Chr2:6012474-6012493 None:intergenic 30.0%
AACAACAAGATTATGAGTTC+AGG - Chr2:6009017-6009036 MsG0280006771.01.T01:CDS 30.0%
AACATATCAGATCTAATGCT+AGG + Chr2:6010362-6010381 None:intergenic 30.0%
AACTGTGAATGAGAAAGAAA+AGG + Chr2:6010209-6010228 None:intergenic 30.0%
AAGATCAATATGGATGATAG+AGG + Chr2:6011519-6011538 None:intergenic 30.0%
AAGTTGAAGCCTATGAAATA+AGG - Chr2:6010919-6010938 MsG0280006771.01.T01:intron 30.0%
ACATGAAGTTAGAACGAATA+AGG - Chr2:6010142-6010161 MsG0280006771.01.T01:intron 30.0%
ACGAGGAAATGAAAATAGAA+GGG + Chr2:6011060-6011079 None:intergenic 30.0%
ACTGTGAATGAGAAAGAAAA+GGG + Chr2:6010208-6010227 None:intergenic 30.0%
ACTTGCAGTACAAAATCATT+AGG + Chr2:6012164-6012183 None:intergenic 30.0%
AGCATTAGATCTGATATGTT+TGG - Chr2:6010362-6010381 MsG0280006771.01.T01:CDS 30.0%
ATAACAGGATTCAAGATTGT+TGG - Chr2:6012242-6012261 MsG0280006771.01.T01:intron 30.0%
CAAAACCTTGAATCATTTAG+GGG - Chr2:6011548-6011567 MsG0280006771.01.T01:CDS 30.0%
CAGTACAAAATCATTAGGAA+AGG + Chr2:6012159-6012178 None:intergenic 30.0%
CATGATTATGTGAGTAAATC+TGG - Chr2:6012133-6012152 MsG0280006771.01.T01:intron 30.0%
CATGCAAAATCATATATGGT+CGG + Chr2:6012762-6012781 None:intergenic 30.0%
CATGCATGCAAAATCATATA+TGG + Chr2:6012766-6012785 None:intergenic 30.0%
CTAAATGTATTTGTAACTGC+AGG - Chr2:6012846-6012865 MsG0280006771.01.T01:CDS 30.0%
GATTTAGTAAATCCTTCAAG+TGG - Chr2:6013434-6013453 MsG0280006771.01.T01:five_prime_UTR 30.0%
GCAAAACCTTGAATCATTTA+GGG - Chr2:6011547-6011566 MsG0280006771.01.T01:CDS 30.0%
TAACAGGATTCAAGATTGTT+GGG - Chr2:6012243-6012262 MsG0280006771.01.T01:intron 30.0%
TAATGTAATATTCTCTGCTG+AGG - Chr2:6010840-6010859 MsG0280006771.01.T01:intron 30.0%
TACATTCTATTTAGGGATCA+TGG - Chr2:6009804-6009823 MsG0280006771.01.T01:CDS 30.0%
TACGAGGAAATGAAAATAGA+AGG + Chr2:6011061-6011080 None:intergenic 30.0%
TAGAATAGCTAAAGAGTCTA+CGG - Chr2:6011433-6011452 MsG0280006771.01.T01:CDS 30.0%
TCAAACTCAATTCCCAAAAT+AGG + Chr2:6009594-6009613 None:intergenic 30.0%
TCTAGTACATTCAAACCTTT+GGG + Chr2:6013039-6013058 None:intergenic 30.0%
TGACACATATGTGTGATAAA+TGG - Chr2:6009863-6009882 MsG0280006771.01.T01:intron 30.0%
TGCAAAACCTTGAATCATTT+AGG - Chr2:6011546-6011565 MsG0280006771.01.T01:CDS 30.0%
TTATGTTAGGCATATACATG+GGG - Chr2:6012492-6012511 MsG0280006771.01.T01:CDS 30.0%
TTCTTCTCTTTCAACATCAA+CGG + Chr2:6013372-6013391 None:intergenic 30.0%
TTTACTAAATCATCGTCTTC+AGG + Chr2:6013425-6013444 None:intergenic 30.0%
! AATTTGGTGATCAGTGAATT+GGG + Chr2:6010675-6010694 None:intergenic 30.0%
! ACAAGTTTTCCATAATGACA+CGG - Chr2:6010730-6010749 MsG0280006771.01.T01:CDS 30.0%
! ATATGAATGATTGATTCCGA+TGG - Chr2:6010010-6010029 MsG0280006771.01.T01:intron 30.0%
! CAAAATTTTCGTGAAAGTCA+AGG + Chr2:6008753-6008772 None:intergenic 30.0%
! GAAACCCATTTTCAAATATC+TGG + Chr2:6013334-6013353 None:intergenic 30.0%
! GCAAAGTATCAAGATCAATA+TGG + Chr2:6011529-6011548 None:intergenic 30.0%
! TATGAATGATTGATTCCGAT+GGG - Chr2:6010011-6010030 MsG0280006771.01.T01:intron 30.0%
! TTCGTATATTTTACTGTCGT+AGG + Chr2:6010120-6010139 None:intergenic 30.0%
!! AAGCATTTCAAGTTGAAAAG+GGG + Chr2:6009078-6009097 None:intergenic 30.0%
!! AAGGGTTAGCTAAAAAGAAT+AGG + Chr2:6011042-6011061 None:intergenic 30.0%
!! ATAATTATGAAAGGTGTTGG+TGG - Chr2:6008537-6008556 MsG0280006771.01.T01:CDS 30.0%
!! CAAGCATTTCAAGTTGAAAA+GGG + Chr2:6009079-6009098 None:intergenic 30.0%
!! TCAAGCATTTCAAGTTGAAA+AGG + Chr2:6009080-6009099 None:intergenic 30.0%
!!! GCAATTTTTGGCTCATTTAT+GGG - Chr2:6012198-6012217 MsG0280006771.01.T01:intron 30.0%
!!! TGCAATTTTTGGCTCATTTA+TGG - Chr2:6012197-6012216 MsG0280006771.01.T01:intron 30.0%
AAGACATTGAAGATGTTGCA+AGG - Chr2:6012301-6012320 MsG0280006771.01.T01:CDS 35.0%
AAGATTATGAGTTCAGGTGA+AGG - Chr2:6009023-6009042 MsG0280006771.01.T01:CDS 35.0%
AATTTGATGCATGAAACCTG+TGG - Chr2:6012019-6012038 MsG0280006771.01.T01:intron 35.0%
ACACTATAAGGAAACAAGAG+AGG + Chr2:6011787-6011806 None:intergenic 35.0%
ACAGTTAGAATTGATGGAGT+TGG - Chr2:6011472-6011491 MsG0280006771.01.T01:CDS 35.0%
ATAATGATGTTGTCCCCAAA+AGG - Chr2:6010612-6010631 MsG0280006771.01.T01:intron 35.0%
ATAGGACACCTATATCTGTT+TGG - Chr2:6010248-6010267 MsG0280006771.01.T01:intron 35.0%
ATCAACTCAGAACAAGATGT+TGG - Chr2:6011734-6011753 MsG0280006771.01.T01:intron 35.0%
CAATTCACTGATCACCAAAT+TGG - Chr2:6010674-6010693 MsG0280006771.01.T01:intron 35.0%
CATTTATACGATCCAATGGA+GGG - Chr2:6010401-6010420 MsG0280006771.01.T01:CDS 35.0%
CCTTGTAATGAATATGGATC+CGG - Chr2:6009414-6009433 MsG0280006771.01.T01:intron 35.0%
CTAGTACATTCAAACCTTTG+GGG + Chr2:6013038-6013057 None:intergenic 35.0%
CTCCATTGGATCGTATAAAT+GGG + Chr2:6010402-6010421 None:intergenic 35.0%
CTCTAGTACATTCAAACCTT+TGG + Chr2:6013040-6013059 None:intergenic 35.0%
CTCTTCTTTATCATTTGCAC+AGG + Chr2:6012637-6012656 None:intergenic 35.0%
CTGTGCAAATGATAAAGAAG+AGG - Chr2:6012635-6012654 MsG0280006771.01.T01:CDS 35.0%
CTTGTAATGAATATGGATCC+GGG - Chr2:6009415-6009434 MsG0280006771.01.T01:intron 35.0%
GAACATCTACCTAGAATTCA+TGG - Chr2:6010458-6010477 MsG0280006771.01.T01:CDS 35.0%
GAATGAGGAAAGAAATGGAA+AGG - Chr2:6011092-6011111 MsG0280006771.01.T01:intron 35.0%
GGAATCTACAGTACAAATGT+TGG + Chr2:6011654-6011673 None:intergenic 35.0%
GGATGAACAGTTAGAATTGA+TGG - Chr2:6011466-6011485 MsG0280006771.01.T01:CDS 35.0%
GGTAGATGTTCATTTCCAAT+CGG + Chr2:6010449-6010468 None:intergenic 35.0%
GTCATTTCTACACTTCGTAA+TGG - Chr2:6012886-6012905 MsG0280006771.01.T01:CDS 35.0%
TAACCTCAGTGTAACATACA+TGG + Chr2:6011897-6011916 None:intergenic 35.0%
TAATGATGTTGTCCCCAAAA+GGG - Chr2:6010613-6010632 MsG0280006771.01.T01:intron 35.0%
TCACACATATGTGTCAGAAA+AGG + Chr2:6009859-6009878 None:intergenic 35.0%
TCCAGAATCAACTTAGGATT+AGG + Chr2:6009393-6009412 None:intergenic 35.0%
TCCATTGGATCGTATAAATG+GGG + Chr2:6010401-6010420 None:intergenic 35.0%
TGAAGCAACCAAACAGATAT+AGG + Chr2:6010259-6010278 None:intergenic 35.0%
TGTTCATTTCCAATCGGAAA+AGG + Chr2:6010443-6010462 None:intergenic 35.0%
TGTTGAAAGAGAAGAAGAGT+CGG - Chr2:6013376-6013395 MsG0280006771.01.T01:five_prime_UTR 35.0%
! AAGAACATCGACTATACCTA+AGG + Chr2:6009646-6009665 None:intergenic 35.0%
! AGAACATCGACTATACCTAA+GGG + Chr2:6009645-6009664 None:intergenic 35.0%
! CAATTTGGTGATCAGTGAAT+TGG + Chr2:6010676-6010695 None:intergenic 35.0%
! CTTTCTTGCTTCTGAAAGAA+TGG + Chr2:6013306-6013325 None:intergenic 35.0%
! CTTTGAGTTCCATGAATTCT+AGG + Chr2:6010470-6010489 None:intergenic 35.0%
! GAGATAAAATGCCATCGATT+TGG - Chr2:6009928-6009947 MsG0280006771.01.T01:intron 35.0%
! GATTTTCTTGTCCACCAATT+TGG + Chr2:6010691-6010710 None:intergenic 35.0%
! TCACTTCTGGTAGTTTCTTT+TGG - Chr2:6010056-6010075 MsG0280006771.01.T01:intron 35.0%
! TGGAATCTAGGGTTTGAAAA+GGG - Chr2:6008883-6008902 MsG0280006771.01.T01:CDS 35.0%
! TTTGTCAGAAATCTGGTCTT+CGG - Chr2:6013144-6013163 MsG0280006771.01.T01:five_prime_UTR 35.0%
! TTTTCGTGAAAGTCAAGGAA+TGG + Chr2:6008748-6008767 None:intergenic 35.0%
!! GAAAATCCTTTAGCTTTACC+TGG - Chr2:6010704-6010723 MsG0280006771.01.T01:CDS 35.0%
!! TTTGAAAATGGGTTTCTAGC+TGG - Chr2:6013338-6013357 MsG0280006771.01.T01:five_prime_UTR 35.0%
!!! GAATTTTGGTTTCCACTTGA+AGG + Chr2:6013449-6013468 None:intergenic 35.0%
!!! TTTAGCTTTACACTTTTGGG+CGG + Chr2:6011689-6011708 None:intergenic 35.0%
AAAGATTGAAGCGTGAGCAA+AGG - Chr2:6011176-6011195 MsG0280006771.01.T01:CDS 40.0%
AACCTGAAATAGAACACCAC+AGG + Chr2:6012038-6012057 None:intergenic 40.0%
AACCTGTGGTGTTCTATTTC+AGG - Chr2:6012033-6012052 MsG0280006771.01.T01:intron 40.0%
AACCTTGAATCATTTAGGGG+TGG - Chr2:6011551-6011570 MsG0280006771.01.T01:CDS 40.0%
ACAACATCATTATCTCGAGG+AGG + Chr2:6010605-6010624 None:intergenic 40.0%
ACCCCATTTATACGATCCAA+TGG - Chr2:6010397-6010416 MsG0280006771.01.T01:CDS 40.0%
ACCTTGAATCATTTAGGGGT+GGG - Chr2:6011552-6011571 MsG0280006771.01.T01:CDS 40.0%
AGAGAAGGAAGGAAGAAGAA+AGG - Chr2:6011125-6011144 MsG0280006771.01.T01:intron 40.0%
AGAGATTCGCAAAGAGAAAG+AGG - Chr2:6011370-6011389 MsG0280006771.01.T01:CDS 40.0%
AGAGCGAATGAGGAAAGAAA+TGG - Chr2:6011087-6011106 MsG0280006771.01.T01:intron 40.0%
AGATGTTGGCAATCTTCTCA+TGG - Chr2:6011748-6011767 MsG0280006771.01.T01:intron 40.0%
AGCAGAGAATAATTCCCAGA+AGG - Chr2:6008944-6008963 MsG0280006771.01.T01:CDS 40.0%
ATAGAGCTGTCTGAGAAGTT+GGG - Chr2:6009249-6009268 MsG0280006771.01.T01:intron 40.0%
ATTTCACGTTCTCTCTCTTG+AGG - Chr2:6013011-6013030 MsG0280006771.01.T01:five_prime_UTR 40.0%
CCATTTATACGATCCAATGG+AGG - Chr2:6010400-6010419 MsG0280006771.01.T01:CDS 40.0%
CCGGATCCATATTCATTACA+AGG + Chr2:6009417-6009436 None:intergenic 40.0%
CCTCCATTGGATCGTATAAA+TGG + Chr2:6010403-6010422 None:intergenic 40.0%
CTAAGCTCCATTATAGTCTG+TGG + Chr2:6009519-6009538 None:intergenic 40.0%
CTTCCATGTATGTTACACTG+AGG - Chr2:6011891-6011910 MsG0280006771.01.T01:intron 40.0%
GAAAGACAAGAAGGAGTTAC+CGG - Chr2:6009317-6009336 MsG0280006771.01.T01:CDS 40.0%
GAACCATTCTCAGGAAAACA+AGG + Chr2:6013572-6013591 None:intergenic 40.0%
GACTCATAATAACTCCTTGG+AGG + Chr2:6009495-6009514 None:intergenic 40.0%
GATTGAATCAGCCAAATCGA+TGG + Chr2:6009942-6009961 None:intergenic 40.0%
GCAACAGAAATTGATGCTTC+AGG + Chr2:6013191-6013210 None:intergenic 40.0%
GCAGAGAATAATTCCCAGAA+GGG - Chr2:6008945-6008964 MsG0280006771.01.T01:CDS 40.0%
GCTAACTGTCGCAAAATTTC+AGG + Chr2:6012564-6012583 None:intergenic 40.0%
GCTGCAAATTTAACTGTTCC+TGG + Chr2:6012991-6013010 None:intergenic 40.0%
GGTGACTCATAATAACTCCT+TGG + Chr2:6009498-6009517 None:intergenic 40.0%
GTTCGTACACGATATGTTGA+TGG + Chr2:6013251-6013270 None:intergenic 40.0%
TATCAGATCTAATGCTAGGC+TGG + Chr2:6010358-6010377 None:intergenic 40.0%
TCATAATAACTCCTTGGAGG+AGG + Chr2:6009492-6009511 None:intergenic 40.0%
TCATTTCCAATCGGAAAAGG+AGG + Chr2:6010440-6010459 None:intergenic 40.0%
TCGGAACAAACGGATATTCA+GGG + Chr2:6010334-6010353 None:intergenic 40.0%
TGAGTCACCACAGACTATAA+TGG - Chr2:6009509-6009528 MsG0280006771.01.T01:intron 40.0%
TGTACGAACTGCATTTAGAC+AGG - Chr2:6013262-6013281 MsG0280006771.01.T01:five_prime_UTR 40.0%
TTAGCACTATCTGCAGGATT+TGG - Chr2:6012579-6012598 MsG0280006771.01.T01:CDS 40.0%
TTAGGATTAGGCTCATGAGT+AGG + Chr2:6009381-6009400 None:intergenic 40.0%
TTATGGAAAACTTGTCCACC+AGG + Chr2:6010725-6010744 None:intergenic 40.0%
TTCACTCCTAATCCTGTAGA+AGG + Chr2:6012330-6012349 None:intergenic 40.0%
TTCACTGATCACCAAATTGG+TGG - Chr2:6010677-6010696 MsG0280006771.01.T01:intron 40.0%
TTCAGTGGAGACATATCCTT+CGG - Chr2:6009215-6009234 MsG0280006771.01.T01:intron 40.0%
TTCATAGGCTTCAACTTCCT+TGG + Chr2:6010916-6010935 None:intergenic 40.0%
TTCGGAACAAACGGATATTC+AGG + Chr2:6010335-6010354 None:intergenic 40.0%
TTGCTGATGCTCTTGAGTTA+TGG - Chr2:6012077-6012096 MsG0280006771.01.T01:intron 40.0%
TTGGGAGTTAATGCCAGTAT+TGG + Chr2:6010657-6010676 None:intergenic 40.0%
TTGTCCTGCTGAGACAAAAA+GGG + Chr2:6010560-6010579 None:intergenic 40.0%
TTTATCATTTGCACAGGACC+AGG + Chr2:6012631-6012650 None:intergenic 40.0%
TTTCACGTTCTCTCTCTTGA+GGG - Chr2:6013012-6013031 MsG0280006771.01.T01:five_prime_UTR 40.0%
! ACGAGCATTTGCCTTTTCAA+GGG + Chr2:6011414-6011433 None:intergenic 40.0%
! AGGGAAGATGGACCTATTTT+GGG - Chr2:6009579-6009598 MsG0280006771.01.T01:CDS 40.0%
! CATTTTTGCCACTGCACTTA+CGG + Chr2:6012920-6012939 None:intergenic 40.0%
! CTGGAGCCTTGTAATGAATA+TGG - Chr2:6009408-6009427 MsG0280006771.01.T01:CDS 40.0%
! GGAATCTAGGGTTTGAAAAG+GGG - Chr2:6008884-6008903 MsG0280006771.01.T01:CDS 40.0%
! GGTTGTTTGATGACAGAAGT+GGG + Chr2:6013611-6013630 None:intergenic 40.0%
! GTGGAATCTAGGGTTTGAAA+AGG - Chr2:6008882-6008901 MsG0280006771.01.T01:CDS 40.0%
! TACGAGCATTTGCCTTTTCA+AGG + Chr2:6011415-6011434 None:intergenic 40.0%
! TGCTTCGTGTTCTTCTTTTG+TGG - Chr2:6008853-6008872 MsG0280006771.01.T01:CDS 40.0%
! TGCTTCTGAAAGAATGGACT+CGG + Chr2:6013300-6013319 None:intergenic 40.0%
! TGGTTGTTTGATGACAGAAG+TGG + Chr2:6013612-6013631 None:intergenic 40.0%
! TTGTCAGAAATCTGGTCTTC+GGG - Chr2:6013145-6013164 MsG0280006771.01.T01:five_prime_UTR 40.0%
! TTTTCCTGAGAATGGTTCCA+AGG - Chr2:6013574-6013593 MsG0280006771.01.T01:five_prime_UTR 40.0%
!! AATCCTTTAGCTTTACCTGG+TGG - Chr2:6010707-6010726 MsG0280006771.01.T01:CDS 40.0%
!! ATCTTGTTCTGAGTTGATCC+AGG + Chr2:6011732-6011751 None:intergenic 40.0%
!! GCCTAATCCTAAGTTGATTC+TGG - Chr2:6009389-6009408 MsG0280006771.01.T01:CDS 40.0%
!! GTGGTGTTCTATTTCAGGTT+TGG - Chr2:6012038-6012057 MsG0280006771.01.T01:intron 40.0%
!! TAACTCAAGAGCATCAGCAA+AGG + Chr2:6012077-6012096 None:intergenic 40.0%
!! TCTGTTGCTTTGACAAGAGA+TGG - Chr2:6013203-6013222 MsG0280006771.01.T01:five_prime_UTR 40.0%
!! TCTTGTTCTGAGTTGATCCA+GGG + Chr2:6011731-6011750 None:intergenic 40.0%
!!! CTTTTTTTGGCACTGTCAAG+AGG - Chr2:6011840-6011859 MsG0280006771.01.T01:intron 40.0%
!!! TACAGATGTGGTTTTGTCAC+CGG - Chr2:6009289-6009308 MsG0280006771.01.T01:CDS 40.0%
!!! TTAGCTTTACACTTTTGGGC+GGG + Chr2:6011688-6011707 None:intergenic 40.0%
AAAGGCTAGATCGTGAGAGA+AGG - Chr2:6011110-6011129 MsG0280006771.01.T01:intron 45.0%
AACAAGACTCATGCACCCAT+CGG + Chr2:6010029-6010048 None:intergenic 45.0%
AACCTATGTCTCGATCTTCG+AGG + Chr2:6012964-6012983 None:intergenic 45.0%
AAGAAAGGATGATGCGTGAG+AGG - Chr2:6011140-6011159 MsG0280006771.01.T01:intron 45.0%
AAGAGAAAGAGGCAGAGAGA+AGG - Chr2:6011381-6011400 MsG0280006771.01.T01:CDS 45.0%
AAGGAAAGCTGCCCTTGAAA+AGG - Chr2:6011400-6011419 MsG0280006771.01.T01:CDS 45.0%
AATCGGAAAAGGAGGAGTTC+TGG + Chr2:6010432-6010451 None:intergenic 45.0%
AATGAATATGGATCCGGGTC+AGG - Chr2:6009420-6009439 MsG0280006771.01.T01:intron 45.0%
AATTCCCAGAAGGGTGATGA+TGG - Chr2:6008954-6008973 MsG0280006771.01.T01:CDS 45.0%
AGAGCTTGCAGAGAAGATTC+AGG - Chr2:6013056-6013075 MsG0280006771.01.T01:five_prime_UTR 45.0%
AGGACACCTTCTACAGGATT+AGG - Chr2:6012321-6012340 MsG0280006771.01.T01:CDS 45.0%
ATAGGTCCATCTTCCCTCAA+AGG + Chr2:6009576-6009595 None:intergenic 45.0%
ATTCCCAGAAGGGTGATGAT+GGG - Chr2:6008955-6008974 MsG0280006771.01.T01:CDS 45.0%
ATTGCCACCTGATGCATTTG+GGG - Chr2:6009617-6009636 MsG0280006771.01.T01:CDS 45.0%
CAAGGCTCCAGAATCAACTT+AGG + Chr2:6009399-6009418 None:intergenic 45.0%
CATATCCTTCGGAGACAACA+AGG - Chr2:6009226-6009245 MsG0280006771.01.T01:intron 45.0%
CATTCGCTCTTCATTCTACG+AGG + Chr2:6011077-6011096 None:intergenic 45.0%
CATTGCCACCTGATGCATTT+GGG - Chr2:6009616-6009635 MsG0280006771.01.T01:CDS 45.0%
CCTTCTTGTCTTTCAACCTC+CGG + Chr2:6009311-6009330 None:intergenic 45.0%
CGTAGAATGAAGAGCGAATG+AGG - Chr2:6011077-6011096 MsG0280006771.01.T01:intron 45.0%
CTTACTCCTTCCACAATCTC+TGG + Chr2:6012387-6012406 None:intergenic 45.0%
CTTGTCCTGCTGAGACAAAA+AGG + Chr2:6010561-6010580 None:intergenic 45.0%
CTTGTTTGGCTACTCACTTC+TGG - Chr2:6010043-6010062 MsG0280006771.01.T01:intron 45.0%
GATAGAGCTGTCTGAGAAGT+TGG - Chr2:6009248-6009267 MsG0280006771.01.T01:intron 45.0%
GATGACAGAAGTGGGACAAT+CGG + Chr2:6013603-6013622 None:intergenic 45.0%
GCTGTCTTGGTACAAGTTGT+TGG - Chr2:6009983-6010002 MsG0280006771.01.T01:intron 45.0%
GCTTAGAGCAATTGCTTGTG+TGG - Chr2:6009533-6009552 MsG0280006771.01.T01:CDS 45.0%
GGATTAGGAGTGAACCAGAA+TGG - Chr2:6012336-6012355 MsG0280006771.01.T01:CDS 45.0%
GGGACAACATCATTATCTCG+AGG + Chr2:6010608-6010627 None:intergenic 45.0%
GTGGCAAAAATGCGAGAGAA+AGG - Chr2:6012928-6012947 MsG0280006771.01.T01:CDS 45.0%
TAGAGCAATTGCTTGTGTGG+AGG - Chr2:6009536-6009555 MsG0280006771.01.T01:CDS 45.0%
TAGAGCTGTCTGAGAAGTTG+GGG - Chr2:6009250-6009269 MsG0280006771.01.T01:intron 45.0%
TCATTATCTCGAGGAGGAGA+TGG + Chr2:6010599-6010618 None:intergenic 45.0%
TCCATAATGACACGGTCTTG+CGG - Chr2:6010738-6010757 MsG0280006771.01.T01:CDS 45.0%
TCGAGACATAGGTTAACTCC+AGG - Chr2:6012970-6012989 MsG0280006771.01.T01:CDS 45.0%
TGAGTAGGAGAATCCAGCAA+AGG + Chr2:6009366-6009385 None:intergenic 45.0%
TGCGAGAAACAATGCTGTCT+TGG - Chr2:6009970-6009989 MsG0280006771.01.T01:intron 45.0%
TGTCCACCAGGTAAAGCTAA+AGG + Chr2:6010713-6010732 None:intergenic 45.0%
TTACTGTCGTAGGCAAGACT+AGG + Chr2:6010110-6010129 None:intergenic 45.0%
TTCAACTTCCTTGGCAACTC+TGG + Chr2:6010907-6010926 None:intergenic 45.0%
TTGTAACTGCAGGGAAGAAG+TGG - Chr2:6012856-6012875 MsG0280006771.01.T01:CDS 45.0%
! AGAACTCCTCCTTTTCCGAT+TGG - Chr2:6010431-6010450 MsG0280006771.01.T01:CDS 45.0%
! ATGTTCCTCTGACTCGACTT+TGG + Chr2:6008311-6008330 None:intergenic 45.0%
! GAAGGAGTTACCGGTTAAGA+AGG - Chr2:6009326-6009345 MsG0280006771.01.T01:CDS 45.0%
! GAGGGAAGATGGACCTATTT+TGG - Chr2:6009578-6009597 MsG0280006771.01.T01:CDS 45.0%
! GATCTAATGCTAGGCTGGTT+CGG + Chr2:6010353-6010372 None:intergenic 45.0%
! GGGGCTTTGACATACGAAAT+TGG - Chr2:6012511-6012530 MsG0280006771.01.T01:CDS 45.0%
! GGGGTTTTCATCTGTCTCTT+AGG + Chr2:6009059-6009078 None:intergenic 45.0%
! TCGTGTTCTTCTTTTGTGGC+TGG - Chr2:6008857-6008876 MsG0280006771.01.T01:CDS 45.0%
! TCTATCCTTGTTGTCTCCGA+AGG + Chr2:6009234-6009253 None:intergenic 45.0%
! TGTTCTTCTTTTGTGGCTGG+TGG - Chr2:6008860-6008879 MsG0280006771.01.T01:CDS 45.0%
! TTTAAAACGGGCTCCATTGC+AGG - Chr2:6010292-6010311 MsG0280006771.01.T01:intron 45.0%
! TTTGGGTGAGGTTCCCTTTT+GGG + Chr2:6010629-6010648 None:intergenic 45.0%
!! ATGCCAGTATTGGCTACGTT+TGG + Chr2:6010647-6010666 None:intergenic 45.0%
!! ATGGGTGCATGAGTCTTGTT+TGG - Chr2:6010029-6010048 MsG0280006771.01.T01:intron 45.0%
!! GGAAAGCGATGAAGTTGATG+AGG - Chr2:6013397-6013416 MsG0280006771.01.T01:five_prime_UTR 45.0%
!! TGCCAGTATTGGCTACGTTT+GGG + Chr2:6010646-6010665 None:intergenic 45.0%
!! TTTTTGGCACTGTCAAGAGG+CGG - Chr2:6011843-6011862 MsG0280006771.01.T01:intron 45.0%
!!! CTGCCTTGTTTTCCTGAGAA+TGG - Chr2:6013566-6013585 MsG0280006771.01.T01:five_prime_UTR 45.0%
!! AAAAGAATAATAATAATTAA+CGG + Chr2:6008716-6008735 None:intergenic 5.0%
!!! AAAAGATTAATTTTAAAAAA+GGG - Chr2:6008499-6008518 MsG0280006771.01.T01:CDS 5.0%
!!! TAAAAGATTAATTTTAAAAA+AGG - Chr2:6008498-6008517 MsG0280006771.01.T01:CDS 5.0%
AAAGGCGGGAGATAGAACGA+AGG - Chr2:6011194-6011213 MsG0280006771.01.T01:CDS 50.0%
AAGGCGGGAGATAGAACGAA+GGG - Chr2:6011195-6011214 MsG0280006771.01.T01:CDS 50.0%
AATGGAGCTGCTAATCCTGC+CGG - Chr2:6012354-6012373 MsG0280006771.01.T01:CDS 50.0%
ACAGTTAGGGGAGCCTTTGA+GGG - Chr2:6009560-6009579 MsG0280006771.01.T01:CDS 50.0%
AGAGTCTACGGAGCTCATTG+AGG - Chr2:6011445-6011464 MsG0280006771.01.T01:CDS 50.0%
ATCCAGGGCTGGATAGCAAA+TGG + Chr2:6011716-6011735 None:intergenic 50.0%
ATCTCGAGGAGGAGATGGAT+AGG + Chr2:6010594-6010613 None:intergenic 50.0%
ATTGAAGCGTGAGCAAAGGC+GGG - Chr2:6011180-6011199 MsG0280006771.01.T01:CDS 50.0%
CACATCCAAAGTCGAGTCAG+AGG - Chr2:6008303-6008322 MsG0280006771.01.T01:CDS 50.0%
CACATTCCTCAACTCCATCC+GGG + Chr2:6009466-6009485 None:intergenic 50.0%
CACCCAAACGTAGCCAATAC+TGG - Chr2:6010641-6010660 MsG0280006771.01.T01:intron 50.0%
CCAAATGCATCAGGTGGCAA+TGG + Chr2:6009618-6009637 None:intergenic 50.0%
CCACATTCCTCAACTCCATC+CGG + Chr2:6009467-6009486 None:intergenic 50.0%
CCATAATGACACGGTCTTGC+GGG - Chr2:6010739-6010758 MsG0280006771.01.T01:CDS 50.0%
CCATTGCCACCTGATGCATT+TGG - Chr2:6009615-6009634 MsG0280006771.01.T01:CDS 50.0%
CCGGAGGTTGAAAGACAAGA+AGG - Chr2:6009308-6009327 MsG0280006771.01.T01:CDS 50.0%
CGACAGTTAGCACTATCTGC+AGG - Chr2:6012573-6012592 MsG0280006771.01.T01:CDS 50.0%
CGGATCGACAGTTACAGATG+TGG - Chr2:6009277-6009296 MsG0280006771.01.T01:CDS 50.0%
CTCCTCGAAGATCGAGACAT+AGG - Chr2:6012959-6012978 MsG0280006771.01.T01:CDS 50.0%
CTCCTTCCACAATCTCTGGA+TGG + Chr2:6012383-6012402 None:intergenic 50.0%
CTGAGACAAAAAGGGAGGAG+GGG + Chr2:6010552-6010571 None:intergenic 50.0%
CTGTTGCAGAACAGCAGAAG+CGG - Chr2:6010084-6010103 MsG0280006771.01.T01:intron 50.0%
GATTGAAGCGTGAGCAAAGG+CGG - Chr2:6011179-6011198 MsG0280006771.01.T01:CDS 50.0%
GCATCCTTGGAACCATTCTC+AGG + Chr2:6013581-6013600 None:intergenic 50.0%
GCCCACCCCTAAATGATTCA+AGG + Chr2:6011556-6011575 None:intergenic 50.0%
GCCTTTCGCACCTTCTTAAC+CGG + Chr2:6009339-6009358 None:intergenic 50.0%
GCTAGATCGTGAGAGAAGGA+AGG - Chr2:6011114-6011133 MsG0280006771.01.T01:intron 50.0%
GCTGAGACAAAAAGGGAGGA+GGG + Chr2:6010553-6010572 None:intergenic 50.0%
GCTTGTCCTGTTGAGACGAT+AGG + Chr2:6010511-6010530 None:intergenic 50.0%
GTAGGAGAATCCAGCAAAGG+TGG + Chr2:6009363-6009382 None:intergenic 50.0%
GTCTGAGAAGTTGGGGTTGT+CGG - Chr2:6009257-6009276 MsG0280006771.01.T01:intron 50.0%
GTTGCAAGGACACCTTCTAC+AGG - Chr2:6012315-6012334 MsG0280006771.01.T01:CDS 50.0%
TCCTGCTGAGACAAAAAGGG+AGG + Chr2:6010557-6010576 None:intergenic 50.0%
TCTCGAGGAGGAGATGGATA+GGG + Chr2:6010593-6010612 None:intergenic 50.0%
TGATGCTTCAGGTGTCTTGC+TGG + Chr2:6013180-6013199 None:intergenic 50.0%
TGCTGAGACAAAAAGGGAGG+AGG + Chr2:6010554-6010573 None:intergenic 50.0%
TTTGGGCGGGAAAACACACA+AGG + Chr2:6011675-6011694 None:intergenic 50.0%
! AAAGGGAGGAGGGGAAGTAT+AGG + Chr2:6010543-6010562 None:intergenic 50.0%
! AAGGGAGGAGGGGAAGTATA+GGG + Chr2:6010542-6010561 None:intergenic 50.0%
! ACCGGTTAAGAAGGTGCGAA+AGG - Chr2:6009335-6009354 MsG0280006771.01.T01:CDS 50.0%
! CAGGATTAGCAGCTCCATTC+TGG + Chr2:6012353-6012372 None:intergenic 50.0%
! CTTGTGTGGAGGCACAGTTA+GGG - Chr2:6009547-6009566 MsG0280006771.01.T01:CDS 50.0%
! GTTTGGGTGAGGTTCCCTTT+TGG + Chr2:6010630-6010649 None:intergenic 50.0%
! TCCTCCCTTTTTGTCTCAGC+AGG - Chr2:6010553-6010572 MsG0280006771.01.T01:CDS 50.0%
! TCTTCTTTTGTGGCTGGTGG+TGG - Chr2:6008863-6008882 MsG0280006771.01.T01:CDS 50.0%
! TTCCCAGAAGGGTGATGATG+GGG - Chr2:6008956-6008975 MsG0280006771.01.T01:CDS 50.0%
! TTGGGTGAGGTTCCCTTTTG+GGG + Chr2:6010628-6010647 None:intergenic 50.0%
! TTGTGTGGAGGCACAGTTAG+GGG - Chr2:6009548-6009567 MsG0280006771.01.T01:CDS 50.0%
! TTTTGGCACTGTCAAGAGGC+GGG - Chr2:6011844-6011863 MsG0280006771.01.T01:intron 50.0%
!! AACCATTTGCTATCCAGCCC+TGG - Chr2:6011711-6011730 MsG0280006771.01.T01:intron 50.0%
!! CTAGGCTGGTTCGGAACAAA+CGG + Chr2:6010344-6010363 None:intergenic 50.0%
!! GTATTGGCTACGTTTGGGTG+AGG + Chr2:6010641-6010660 None:intergenic 50.0%
!!! AGATGTGGTTTTGTCACCGG+AGG - Chr2:6009292-6009311 MsG0280006771.01.T01:CDS 50.0%
ACCCCCATCATCACCCTTCT+GGG + Chr2:6008961-6008980 None:intergenic 55.0%
AGTGGGACAATCGGCATCCT+TGG + Chr2:6013594-6013613 None:intergenic 55.0%
AGTTGGCTGCAGCAAGCAAG+GGG - Chr2:6011489-6011508 MsG0280006771.01.T01:CDS 55.0%
ATAGGCGAGCACGGGAAGAA+TGG + Chr2:6010493-6010512 None:intergenic 55.0%
CACAATCTCTGGATGGCCAC+CGG + Chr2:6012376-6012395 None:intergenic 55.0%
CACAGTTAGGGGAGCCTTTG+AGG - Chr2:6009559-6009578 MsG0280006771.01.T01:CDS 55.0%
CCGGATGGAGTTGAGGAATG+TGG - Chr2:6009464-6009483 MsG0280006771.01.T01:intron 55.0%
CTCAACTCCATCCGGGCAAA+CGG + Chr2:6009459-6009478 None:intergenic 55.0%
CTCCATTGCAGGCAATGGCA+AGG - Chr2:6010303-6010322 MsG0280006771.01.T01:intron 55.0%
GAGTTGGCTGCAGCAAGCAA+GGG - Chr2:6011488-6011507 MsG0280006771.01.T01:CDS 55.0%
GCGGGTGGAGAAGAAACGAA+AGG - Chr2:6010757-6010776 MsG0280006771.01.T01:CDS 55.0%
GGCCATCCAGAGATTGTGGA+AGG - Chr2:6012378-6012397 MsG0280006771.01.T01:CDS 55.0%
GTCCTTGCCATTGCCTGCAA+TGG + Chr2:6010308-6010327 None:intergenic 55.0%
GTTGAGACGATAGGCGAGCA+CGG + Chr2:6010502-6010521 None:intergenic 55.0%
TAATGACACGGTCTTGCGGG+TGG - Chr2:6010742-6010761 MsG0280006771.01.T01:CDS 55.0%
TATGGATCCGGGTCAGGTTC+TGG - Chr2:6009426-6009445 MsG0280006771.01.T01:intron 55.0%
TCAACTCCATCCGGGCAAAC+GGG + Chr2:6009458-6009477 None:intergenic 55.0%
TGACGATGCCAGAGTTGCCA+AGG - Chr2:6010896-6010915 MsG0280006771.01.T01:intron 55.0%
TGCTCGCCTATCGTCTCAAC+AGG - Chr2:6010502-6010521 MsG0280006771.01.T01:CDS 55.0%
TTCAGCAGCCGTAAGTGCAG+TGG - Chr2:6012909-6012928 MsG0280006771.01.T01:CDS 55.0%
TTGAGACGATAGGCGAGCAC+GGG + Chr2:6010501-6010520 None:intergenic 55.0%
TTTGGCACTGTCAAGAGGCG+GGG - Chr2:6011845-6011864 MsG0280006771.01.T01:intron 55.0%
! AGAATGGACTCGGCATCTGC+AGG + Chr2:6013290-6013309 None:intergenic 55.0%
! CAGGTGTCTTGCTGGTTGTC+AGG + Chr2:6013172-6013191 None:intergenic 55.0%
! CCCGCAAGACCGTGTCATTA+TGG + Chr2:6010742-6010761 None:intergenic 55.0%
! GATGCATTTGGGGCACCCTT+AGG - Chr2:6009627-6009646 MsG0280006771.01.T01:CDS 55.0%
! GCTTGTGTGGAGGCACAGTT+AGG - Chr2:6009546-6009565 MsG0280006771.01.T01:CDS 55.0%
! GGAAAAGGAGGAGTTCTGGC+AGG + Chr2:6010428-6010447 None:intergenic 55.0%
! GGGGAAGTATAGGGAGTCAC+AGG + Chr2:6010533-6010552 None:intergenic 55.0%
!! AAGGGTGCCCCAAATGCATC+AGG + Chr2:6009627-6009646 None:intergenic 55.0%
!! GTGGCTGGTGGTGGAATCTA+GGG - Chr2:6008872-6008891 MsG0280006771.01.T01:CDS 55.0%
!! GTTCTGAGTTGATCCAGGGC+TGG + Chr2:6011727-6011746 None:intergenic 55.0%
!! TCCCAGAAGGGTGATGATGG+GGG - Chr2:6008957-6008976 MsG0280006771.01.T01:CDS 55.0%
!! TGTGGCTGGTGGTGGAATCT+AGG - Chr2:6008871-6008890 MsG0280006771.01.T01:CDS 55.0%
ACGGGCTCCATTGCAGGCAA+TGG - Chr2:6010298-6010317 MsG0280006771.01.T01:intron 60.0%
CACCCCCATCATCACCCTTC+TGG + Chr2:6008962-6008981 None:intergenic 60.0%
CGGTGGCCATCCAGAGATTG+TGG - Chr2:6012374-6012393 MsG0280006771.01.T01:CDS 60.0%
CGTTTGCCCGGATGGAGTTG+AGG - Chr2:6009457-6009476 MsG0280006771.01.T01:intron 60.0%
CTCTCTCTTGAGGGCCCCAA+AGG - Chr2:6013021-6013040 MsG0280006771.01.T01:five_prime_UTR 60.0%
GCGTGAGAGGCAGAGAGAAG+AGG - Chr2:6011153-6011172 MsG0280006771.01.T01:CDS 60.0%
GCTAGAGCCAGAACCTGACC+CGG + Chr2:6009436-6009455 None:intergenic 60.0%
GGAATGTGGTGCCTCCTCCA+AGG - Chr2:6009478-6009497 MsG0280006771.01.T01:intron 60.0%
GGAGTTGGCTGCAGCAAGCA+AGG - Chr2:6011487-6011506 MsG0280006771.01.T01:CDS 60.0%
GGTGCCCCAAATGCATCAGG+TGG + Chr2:6009624-6009643 None:intergenic 60.0%
GTTCTGGCAGGACCCTCCAT+TGG + Chr2:6010416-6010435 None:intergenic 60.0%
TTGGCACTGTCAAGAGGCGG+GGG - Chr2:6011846-6011865 MsG0280006771.01.T01:intron 60.0%
! GGGGAGCCTTTGAGGGAAGA+TGG - Chr2:6009567-6009586 MsG0280006771.01.T01:CDS 60.0%
ATCTCTGGATGGCCACCGGC+AGG + Chr2:6012372-6012391 None:intergenic 65.0%
CTCTAGCCCGTTTGCCCGGA+TGG - Chr2:6009449-6009468 MsG0280006771.01.T01:intron 65.0%
GGAGCTGCTAATCCTGCCGG+TGG - Chr2:6012357-6012376 MsG0280006771.01.T01:CDS 65.0%
TGGCACTGTCAAGAGGCGGG+GGG - Chr2:6011847-6011866 MsG0280006771.01.T01:intron 65.0%
!! CTGGCTCTAGCCCGTTTGCC+CGG - Chr2:6009445-6009464 MsG0280006771.01.T01:intron 65.0%
!! GCGAAAGGCGCCACCTTTGC+TGG - Chr2:6009350-6009369 MsG0280006771.01.T01:CDS 65.0%
CAAGAGGCGGGGGGCGAAGT+TGG - Chr2:6011856-6011875 MsG0280006771.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr2 gene 6008281 6013649 6008281 ID=MsG0280006771.01;Name=MsG0280006771.01
Chr2 mRNA 6008281 6013649 6008281 ID=MsG0280006771.01.T01;Parent=MsG0280006771.01;Name=MsG0280006771.01.T01;_AED=0.21;_eAED=0.21;_QI=652|1|1|1|0.88|0.84|19|0|945
Chr2 exon 6008281 6008778 6008281 ID=MsG0280006771.01.T01:exon:2487;Parent=MsG0280006771.01.T01
Chr2 exon 6008853 6009062 6008853 ID=MsG0280006771.01.T01:exon:2486;Parent=MsG0280006771.01.T01
Chr2 exon 6009274 6009429 6009274 ID=MsG0280006771.01.T01:exon:2485;Parent=MsG0280006771.01.T01
Chr2 exon 6009529 6009681 6009529 ID=MsG0280006771.01.T01:exon:2484;Parent=MsG0280006771.01.T01
Chr2 exon 6009789 6009875 6009789 ID=MsG0280006771.01.T01:exon:2483;Parent=MsG0280006771.01.T01
Chr2 exon 6010161 6010261 6010161 ID=MsG0280006771.01.T01:exon:2482;Parent=MsG0280006771.01.T01
Chr2 exon 6010361 6010583 6010361 ID=MsG0280006771.01.T01:exon:2481;Parent=MsG0280006771.01.T01
Chr2 exon 6010684 6010848 6010684 ID=MsG0280006771.01.T01:exon:2480;Parent=MsG0280006771.01.T01
Chr2 exon 6010947 6011036 6010947 ID=MsG0280006771.01.T01:exon:2479;Parent=MsG0280006771.01.T01
Chr2 exon 6011152 6011616 6011152 ID=MsG0280006771.01.T01:exon:2478;Parent=MsG0280006771.01.T01
Chr2 exon 6011767 6011846 6011767 ID=MsG0280006771.01.T01:exon:2477;Parent=MsG0280006771.01.T01
Chr2 exon 6012282 6012710 6012282 ID=MsG0280006771.01.T01:exon:2476;Parent=MsG0280006771.01.T01
Chr2 exon 6012817 6013649 6012817 ID=MsG0280006771.01.T01:exon:2475;Parent=MsG0280006771.01.T01
Chr2 five_prime_UTR 6012998 6013649 6012998 ID=MsG0280006771.01.T01:five_prime_utr;Parent=MsG0280006771.01.T01
Chr2 CDS 6012817 6012997 6012817 ID=MsG0280006771.01.T01:cds;Parent=MsG0280006771.01.T01
Chr2 CDS 6012282 6012710 6012282 ID=MsG0280006771.01.T01:cds;Parent=MsG0280006771.01.T01
Chr2 CDS 6011767 6011846 6011767 ID=MsG0280006771.01.T01:cds;Parent=MsG0280006771.01.T01
Chr2 CDS 6011152 6011616 6011152 ID=MsG0280006771.01.T01:cds;Parent=MsG0280006771.01.T01
Chr2 CDS 6010947 6011036 6010947 ID=MsG0280006771.01.T01:cds;Parent=MsG0280006771.01.T01
Chr2 CDS 6010684 6010848 6010684 ID=MsG0280006771.01.T01:cds;Parent=MsG0280006771.01.T01
Chr2 CDS 6010361 6010583 6010361 ID=MsG0280006771.01.T01:cds;Parent=MsG0280006771.01.T01
Chr2 CDS 6010161 6010261 6010161 ID=MsG0280006771.01.T01:cds;Parent=MsG0280006771.01.T01
Chr2 CDS 6009789 6009875 6009789 ID=MsG0280006771.01.T01:cds;Parent=MsG0280006771.01.T01
Chr2 CDS 6009529 6009681 6009529 ID=MsG0280006771.01.T01:cds;Parent=MsG0280006771.01.T01
Chr2 CDS 6009274 6009429 6009274 ID=MsG0280006771.01.T01:cds;Parent=MsG0280006771.01.T01
Chr2 CDS 6008853 6009062 6008853 ID=MsG0280006771.01.T01:cds;Parent=MsG0280006771.01.T01
Chr2 CDS 6008281 6008778 6008281 ID=MsG0280006771.01.T01:cds;Parent=MsG0280006771.01.T01
Gene Sequence

>MsG0280006771.01.T01

ATGGAAGCTGAAGCAGAGAATAATTCCCAGAAGGGTGATGATGGGGGTGAAAATAGTAATGAAAATTTCAACAACAATGTAAGTAACAACAAGATTATGAGTTCAGGTGAAGGTCAAAGCAAACCTAAGAGACAGATGAAAACCCCTTTTCAACTTGAAATGCTTGAGAAAGCTTATGCTTTGGAGACATATCCTTCGGAGACAACAAGGATAGAGCTGTCTGAGAAGTTGGGGTTGTCGGATCGACAGTTACAGATGTGGTTTTGTCACCGGAGGTTGAAAGACAAGAAGGAGTTACCGGTTAAGAAGGTGCGAAAGGCGCCACCTTTGCTGGATTCTCCTACTCATGAGCCTAATCCTAAGTTGATTCTGGAGCCTTGTAATGAATATGGATCCGGGTCAGGTTCTGGCTCTAGCCCGTTTGCCCGGATGGAGTTGAGGAATGTGGTGCCTCCTCCAAGGAGTTATTATGAGTCACCACAGACTATAATGGAGCTTAGAGCAATTGCTTGTGTGGAGGCACAGTTAGGGGAGCCTTTGAGGGAAGATGGACCTATTTTGGGAATTGAGTTTGATCCATTGCCACCTGATGCATTTGGGGCACCCTTAGCTGTTGCAGAACAGCAGAAGCGGCCTAGTCTTGCCTACGACAGTAAAATATACGAAAGACATGAAGTTAGAACGAATAAGGCAATGGCAAGGACATTCCCTGAATATCCGTTTGTTCCGAACCAGCCTAGCATTAGATCTGATATGTTTGGACAATTGAGTCAACCCCATTTATACGATCCAATGGAGGGTCCTGCCAGAACTCCTCCTTTTCCGATTGGAAATGAACATCTACCTAGAATTCATGGAACTCAAAGCCATTCTTCCCGTGCTCGCCTATCGTCTCAACAGGACAAGCCTGTGACTCCCTATACTTCCCCTCCTCCCTTTTTGTCTCAGCAGGACAAGCAATCAATTCCCTATCCATCTCCTCCTCGAGATAATGATGTTGTCCCCAAAAGGGAACCTCACCCAAACGTAGCCAATACTGGCATTAACTCCCAATTCACTGATCACCAAATTGGTGGACAAGAAAATCCTTTAGCTTTACCTGGTGGACAAGTTTTCCATAATGACACGGTCTTGCGGGTGGAGAAGAAACGAAAGACTGACGATGCCAGAGTTGCCAAGGAAGTTGAAGCCTATGAAATAAGGATGAAGAAAGAACTTGAGAAACAAGATATCTTAAGAAGAAAGAATGAAGAGCGAATGAGGAAAGAAATGGAAAGGCTAGATCGTGAGAGAAGGAAGGAAGAAGAAAGGATGATGCGTGAGAGGCAGAGAGAAGAGGAAAGATTGAAGCGTGAGCAAAGGCGGGAGATAGAACGAAGGGAAAAATATATGATGAAAGAACATTTAAGAGCTGAGAAAAGGAAGCAAAAAGAAGAGATTCGCAAAGAGAAAGAGGCAGAGAGAAGGAAAGCTGCCCTTGAAAAGGCAAATGCTCGTAGAATAGCTAAAGAGTCTACGGAGCTCATTGAGGATGAACAGTTAGAATTGATGGAGTTGGCTGCAGCAAGCAAGGGGCTTTCCTCTATCATCCATATTGATCTTGATACTTTGCAAAACCTTGAATCATTTAGGGATTCCTTGTGTGTTTTCCCGCCCAAAAGTGTAAAGCTAAAAAAACCATTTGCTATCCAGCCCTGGATCAACTCAGAACAAGATGTTGGCAATCTTCTCATGGTTTGGAGATTCTTGATTACCTTTGCTGATGCTCTTGAGTTATGGCCTTTTACTCTTGATGAATTTGTACAAGCATTTCATGATTATGATTCAAGATTGTTGGGTGAGATACATGTTGCTGTTCTTAAAATGATAATAAAAGACATTGAAGATGTTGCAAGGACACCTTCTACAGGATTAGGAGTGAACCAGAATGGAGCTGCTAATCCTGCCGGTGGCCATCCAGAGATTGTGGAAGGAGCATATACATGGGGCTTTGACATACGAAATTGGCAGAAGAACTTAAATCAATTGACATGGCCTGAAATTTTGCGACAGTTAGCACTATCTGCAGGATTTGGACCACAGTTGAAAAAAAGAAGTATTACCTGGTCCTGTGCAAATGATAAAGAAGAGGGAAGAAGTGGTGATGATGTCATTTCTACACTTCGTAATGGTTCAGCAGCCGTAAGTGCAGTGGCAAAAATGCGAGAGAAAGGTTTATTAGCTCCTCGAAGATCGAGACATAGGTTAACTCCAGGAACAGTTAAATTTGCAGCATTTCACGTTCTCTCTCTTGAGGGCCCCAAAGGTTTGAATGTACTAGAGCTTGCAGAGAAGATTCAGAAATCTGGTCTTCGGGACCTGACAACCAGCAAGACACCTGAAGCATCAATTTCTGTTGCTTTGACAAGAGATGGCAAACTTTTCGAAAGAATAGCTCCATCAACATATCGTGTACGAACTGCATTTAGACAGGATCCTGCAGATGCCGAGTCCATTCTTTCAGAAGCAAGAAAGAAAATCCAGATATTTGAAAATGGGTTTCTAGCTGGTGAAGATGCCGTTGATGTTGAAAGAGAAGAAGAGTCGGAAAGCGATGAAGTTGATGAGGATCCTGAAGACGATGATTTAGTAAATCCTTCAAGTGGAAACCAAAATTCAGTACAATACGATAATATGGATATTAGTTTGGTAAATGTAAAAGAAAATTTGGGCAATGATGTAGACGTTATTCAAAATAAGCTTGATGATACTGATCTGCCTTGTTTTCCTGAGAATGGTTCCAAGGATGCCGATTGTCCCACTTCTGTCATCAAACAACCATTGCGTGTGAAAATCTAA
Protein sequence

>MsG0280006771.01.T01

MEAEAENNSQKGDDGGENSNENFNNNVSNNKIMSSGEGQSKPKRQMKTPFQLEMLEKAYALETYPSETTRIELSEKLGLSDRQLQMWFCHRRLKDKKELPVKKVRKAPPLLDSPTHEPNPKLILEPCNEYGSGSGSGSSPFARMELRNVVPPPRSYYESPQTIMELRAIACVEAQLGEPLREDGPILGIEFDPLPPDAFGAPLAVAEQQKRPSLAYDSKIYERHEVRTNKAMARTFPEYPFVPNQPSIRSDMFGQLSQPHLYDPMEGPARTPPFPIGNEHLPRIHGTQSHSSRARLSSQQDKPVTPYTSPPPFLSQQDKQSIPYPSPPRDNDVVPKREPHPNVANTGINSQFTDHQIGGQENPLALPGGQVFHNDTVLRVEKKRKTDDARVAKEVEAYEIRMKKELEKQDILRRKNEERMRKEMERLDRERRKEEERMMRERQREEERLKREQRREIERREKYMMKEHLRAEKRKQKEEIRKEKEAERRKAALEKANARRIAKESTELIEDEQLELMELAAASKGLSSIIHIDLDTLQNLESFRDSLCVFPPKSVKLKKPFAIQPWINSEQDVGNLLMVWRFLITFADALELWPFTLDEFVQAFHDYDSRLLGEIHVAVLKMIIKDIEDVARTPSTGLGVNQNGAANPAGGHPEIVEGAYTWGFDIRNWQKNLNQLTWPEILRQLALSAGFGPQLKKRSITWSCANDKEEGRSGDDVISTLRNGSAAVSAVAKMREKGLLAPRRSRHRLTPGTVKFAAFHVLSLEGPKGLNVLELAEKIQKSGLRDLTTSKTPEASISVALTRDGKLFERIAPSTYRVRTAFRQDPADAESILSEARKKIQIFENGFLAGEDAVDVEREEESESDEVDEDPEDDDLVNPSSGNQNSVQYDNMDISLVNVKENLGNDVDVIQNKLDDTDLPCFPENGSKDADCPTSVIKQPLRVKI*