Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280006838.01.T01 | XP_013450120.1 | 98.157 | 217 | 3 | 1 | 1 | 216 | 1 | 217 | 4.76E-147 | 418 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280006838.01.T01 | A0A072U4S8 | 98.157 | 217 | 3 | 1 | 1 | 216 | 1 | 217 | 2.27e-147 | 418 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0280006838.01 | MsG0580024755.01 | 0.802584 | 5.234725e-49 | 2.573746e-46 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280006838.01.T01 | MTR_7g105130 | 98.157 | 217 | 3 | 1 | 1 | 216 | 1 | 217 | 5.76e-151 | 418 |
MsG0280006838.01.T01 | MTR_2g086660 | 47.619 | 105 | 53 | 2 | 114 | 216 | 151 | 255 | 8.68e-20 | 85.1 |
MsG0280006838.01.T01 | MTR_2g086660 | 47.059 | 102 | 52 | 2 | 114 | 213 | 151 | 252 | 7.38e-18 | 80.1 |
MsG0280006838.01.T01 | MTR_4g132020 | 44.643 | 112 | 48 | 5 | 109 | 214 | 71 | 174 | 1.35e-17 | 77.4 |
MsG0280006838.01.T01 | MTR_2g023070 | 34.529 | 223 | 109 | 10 | 13 | 214 | 10 | 216 | 5.35e-15 | 71.2 |
MsG0280006838.01.T01 | MTR_2g023390 | 58.000 | 50 | 21 | 0 | 167 | 216 | 107 | 156 | 6.78e-14 | 67.0 |
MsG0280006838.01.T01 | MTR_3g052330 | 33.803 | 142 | 66 | 4 | 102 | 216 | 58 | 198 | 1.02e-13 | 67.4 |
MsG0280006838.01.T01 | MTR_7g101250 | 61.224 | 49 | 15 | 1 | 168 | 216 | 116 | 160 | 1.53e-11 | 60.8 |
MsG0280006838.01.T01 | MTR_2g094410 | 61.224 | 49 | 15 | 1 | 168 | 216 | 112 | 156 | 2.05e-11 | 60.5 |
MsG0280006838.01.T01 | MTR_2g018175 | 54.000 | 50 | 21 | 1 | 167 | 216 | 79 | 126 | 2.87e-11 | 59.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280006838.01.T01 | AT3G15040 | 50.000 | 116 | 53 | 3 | 105 | 216 | 129 | 243 | 2.21e-20 | 86.3 |
MsG0280006838.01.T01 | AT4G21970 | 43.182 | 88 | 49 | 1 | 130 | 216 | 58 | 145 | 1.89e-17 | 76.6 |
MsG0280006838.01.T01 | AT3G45210 | 58.333 | 60 | 21 | 1 | 157 | 216 | 93 | 148 | 2.66e-16 | 73.2 |
MsG0280006838.01.T01 | AT4G04630 | 46.154 | 104 | 51 | 2 | 118 | 216 | 65 | 168 | 1.41e-14 | 69.3 |
MsG0280006838.01.T01 | AT1G29640 | 45.455 | 88 | 37 | 3 | 129 | 216 | 63 | 139 | 8.11e-14 | 66.6 |
MsG0280006838.01.T01 | AT1G61930 | 33.178 | 214 | 106 | 8 | 15 | 215 | 13 | 202 | 2.71e-11 | 60.8 |
MsG0280006838.01.T01 | AT4G26950 | 36.111 | 144 | 75 | 5 | 74 | 216 | 17 | 144 | 3.98e-11 | 59.3 |
MsG0280006838.01.T01 | AT4G26950 | 36.111 | 144 | 75 | 5 | 74 | 216 | 17 | 144 | 3.98e-11 | 59.3 |
Find 86 sgRNAs with CRISPR-Local
Find 93 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAGGAGGCGGTCGGAGGAGG+AGG | 0.297600 | 2:-6965888 | None:intergenic |
GGCATACTTGCTGTCCTATC+AGG | 0.339956 | 2:+6966082 | MsG0280006838.01.T01:CDS |
CTCATCGCCGGCGGCGGAGG+TGG | 0.349135 | 2:-6965936 | None:intergenic |
TAGGAAGGTGTGGGGTCCAT+TGG | 0.377476 | 2:-6965851 | None:intergenic |
ATCGCCGGCGGCGGAGGTGG+TGG | 0.387749 | 2:-6965933 | None:intergenic |
GCCGAGGAGGCGGTCGGAGG+AGG | 0.389773 | 2:-6965891 | None:intergenic |
GGAGGCGGTCGGAGGAGGAG+GGG | 0.390821 | 2:-6965886 | None:intergenic |
GGCGGCGGAGGTGGTGGAAG+GGG | 0.395749 | 2:-6965927 | None:intergenic |
GGAGGGGAATCGGCGGTGAT+AGG | 0.396483 | 2:-6965870 | None:intergenic |
CGATTCACCGCGGCGGTTGT+CGG | 0.399183 | 2:-6966107 | None:intergenic |
AATCGACTCGGCGGCATAAT+CGG | 0.409285 | 2:-6966265 | None:intergenic |
CGGAAACGAAGGAATCATTC+TGG | 0.409373 | 2:-6966164 | None:intergenic |
TTCAATCAAGAAAACCGGTT+TGG | 0.414262 | 2:-6966483 | None:intergenic |
GAGCTCATCGCCGGCGGCGG+AGG | 0.421924 | 2:-6965939 | None:intergenic |
GGTCGGAGGAGGAGGGGAAT+CGG | 0.426093 | 2:-6965880 | None:intergenic |
ACCGGTTCAATCAAGAAAAC+CGG | 0.431244 | 2:-6966488 | None:intergenic |
AGCTCCTTCGGTTGAGGTGG+TGG | 0.433129 | 2:-6966022 | None:intergenic |
ATCATATTCTCGGAAGGTCT+TGG | 0.448234 | 2:-6966190 | None:intergenic |
CCTTCACCGGAGCAGATTGT+TGG | 0.453692 | 2:-6966240 | None:intergenic |
TGTTGATGAGCTTGCGGTGT+TGG | 0.456949 | 2:+6966303 | MsG0280006838.01.T01:CDS |
ATCATTCTGGAAGATGAAAC+GGG | 0.459788 | 2:-6966151 | None:intergenic |
CCGGCGGCGGAGGTGGTGGA+AGG | 0.463410 | 2:-6965929 | None:intergenic |
CGGTGACGAGTTAGCTCCTT+CGG | 0.466851 | 2:-6966034 | None:intergenic |
TCCTCCTCCGACCGCCTCCT+CGG | 0.473339 | 2:+6965890 | MsG0280006838.01.T01:CDS |
TTCTCGGAAGGTCTTGGTCT+CGG | 0.478965 | 2:-6966184 | None:intergenic |
GGCATAATCGGAACCTTCAC+CGG | 0.480745 | 2:-6966253 | None:intergenic |
GAGATTGTTGCGAGAGGCTC+TGG | 0.482407 | 2:+6966367 | MsG0280006838.01.T01:CDS |
AACGCTGTTCTGCGCCAAAC+CGG | 0.488010 | 2:+6966469 | MsG0280006838.01.T01:CDS |
CATCAACATCCCTACGCCTC+GGG | 0.490643 | 2:-6966288 | None:intergenic |
CGGCGGCGGAGGTGGTGGAA+GGG | 0.493874 | 2:-6965928 | None:intergenic |
AGTGAGCTCATCGCCGGCGG+CGG | 0.495744 | 2:-6965942 | None:intergenic |
GGCGGTTGTCGGAGCCTGAT+AGG | 0.495981 | 2:-6966096 | None:intergenic |
CATGGATTGAATCATATTCT+CGG | 0.498530 | 2:-6966200 | None:intergenic |
CGGAGGAGGAGGGGAATCGG+CGG | 0.500841 | 2:-6965877 | None:intergenic |
CCTTCCACCACCTCCGCCGC+CGG | 0.504410 | 2:+6965929 | MsG0280006838.01.T01:CDS |
AGGAGGCGGTCGGAGGAGGA+GGG | 0.507664 | 2:-6965887 | None:intergenic |
CAACCGCCGCGGTGAATCGC+CGG | 0.517412 | 2:+6966111 | MsG0280006838.01.T01:CDS |
AAAACCGAAAAGGTAGTTCT+CGG | 0.517462 | 2:-6966397 | None:intergenic |
AACTCCTTCCAAAACCGAAA+AGG | 0.517512 | 2:-6966407 | None:intergenic |
GGGAATCGGCGGTGATAGGA+AGG | 0.518948 | 2:-6965866 | None:intergenic |
AGTTGAAGGCGCCGAGGAGG+CGG | 0.522197 | 2:-6965901 | None:intergenic |
AATCATTCTGGAAGATGAAA+CGG | 0.522636 | 2:-6966152 | None:intergenic |
CAAAGGGAGAGATCTTCGTC+AGG | 0.523089 | 2:+6966441 | MsG0280006838.01.T01:CDS |
CCAACAATCTGCTCCGGTGA+AGG | 0.523875 | 2:+6966240 | MsG0280006838.01.T01:CDS |
AGCTTCAGTGAGCTCATCGC+CGG | 0.525383 | 2:-6965948 | None:intergenic |
ATTCTTCCAACAATCTGCTC+CGG | 0.527245 | 2:+6966234 | MsG0280006838.01.T01:CDS |
GGTGGAAGGGGAGAAGTTGA+AGG | 0.527376 | 2:-6965915 | None:intergenic |
CGAGTTAGCTCCTTCGGTTG+AGG | 0.528148 | 2:-6966028 | None:intergenic |
CGAGTCGATTCCCGAGGCGT+AGG | 0.528775 | 2:+6966278 | MsG0280006838.01.T01:CDS |
GAGTCGATTCCCGAGGCGTA+GGG | 0.543346 | 2:+6966279 | MsG0280006838.01.T01:CDS |
CGGCGGTGATAGGAAGGTGT+GGG | 0.546670 | 2:-6965860 | None:intergenic |
TCATCAACATCCCTACGCCT+CGG | 0.557335 | 2:-6966289 | None:intergenic |
GGCGCCGAGGAGGCGGTCGG+AGG | 0.578979 | 2:-6965894 | None:intergenic |
GTTAGCTCCTTCGGTTGAGG+TGG | 0.580450 | 2:-6966025 | None:intergenic |
TGATAGGACAGCAAGTATGC+CGG | 0.581191 | 2:-6966080 | None:intergenic |
CTACGCCTCGGGAATCGACT+CGG | 0.583023 | 2:-6966277 | None:intergenic |
TTCAGTGAGCTCATCGCCGG+CGG | 0.583955 | 2:-6965945 | None:intergenic |
GGAGTTGGAAGAACTCTCAA+AGG | 0.586119 | 2:+6966424 | MsG0280006838.01.T01:CDS |
GGTGAATCGCCGGTGTTCCG+TGG | 0.595121 | 2:+6966121 | MsG0280006838.01.T01:CDS |
TTCAGATTCGGAGCTGTCGG+AGG | 0.599094 | 2:-6965987 | None:intergenic |
AGAAGTTGAAGGCGCCGAGG+AGG | 0.600990 | 2:-6965904 | None:intergenic |
TTCGATCTATCTCAAGACTC+CGG | 0.602739 | 2:+6966061 | MsG0280006838.01.T01:CDS |
TCGGCGGTGATAGGAAGGTG+TGG | 0.607076 | 2:-6965861 | None:intergenic |
GAGTTGGAAGAACTCTCAAA+GGG | 0.607793 | 2:+6966425 | MsG0280006838.01.T01:CDS |
GGGGATTTACCACGGAACAC+CGG | 0.607892 | 2:-6966130 | None:intergenic |
GATTGAATCATATTCTCGGA+AGG | 0.610133 | 2:-6966196 | None:intergenic |
GAAGGCGCCGAGGAGGCGGT+CGG | 0.614301 | 2:-6965897 | None:intergenic |
GGGAGAAGTTGAAGGCGCCG+AGG | 0.615412 | 2:-6965907 | None:intergenic |
ACGTCCACCACCTCAACCGA+AGG | 0.622595 | 2:+6966018 | MsG0280006838.01.T01:CDS |
GGTCTTGGTCTCGGAAACGA+AGG | 0.637188 | 2:-6966175 | None:intergenic |
CCTCATGAGATTGTTGCGAG+AGG | 0.640232 | 2:+6966361 | MsG0280006838.01.T01:CDS |
CGAAGGAGCTAACTCGTCAC+CGG | 0.643951 | 2:+6966035 | MsG0280006838.01.T01:CDS |
CTTGAGATAGATCGAAACTC+CGG | 0.644038 | 2:-6966054 | None:intergenic |
CCTCTCGCAACAATCTCATG+AGG | 0.649415 | 2:-6966361 | None:intergenic |
TGCCGCCGAGTCGATTCCCG+AGG | 0.656419 | 2:+6966272 | MsG0280006838.01.T01:CDS |
TAGGGATGTTGATGAGCTTG+CGG | 0.658353 | 2:+6966297 | MsG0280006838.01.T01:CDS |
CTCGCAACAATCTCATGAGG+CGG | 0.658511 | 2:-6966358 | None:intergenic |
TGATGATGACGACGACGGCG+AGG | 0.682915 | 2:+6966327 | MsG0280006838.01.T01:CDS |
GGCGGTGATAGGAAGGTGTG+GGG | 0.700557 | 2:-6965859 | None:intergenic |
CATTCTGGAAGATGAAACGG+GGG | 0.702981 | 2:-6966149 | None:intergenic |
TCATTCTGGAAGATGAAACG+GGG | 0.703104 | 2:-6966150 | None:intergenic |
GGAACACCGGCGATTCACCG+CGG | 0.705322 | 2:-6966117 | None:intergenic |
TCAGGCTCCGACAACCGCCG+CGG | 0.710525 | 2:+6966100 | MsG0280006838.01.T01:CDS |
ACACCGGCGATTCACCGCGG+CGG | 0.716052 | 2:-6966114 | None:intergenic |
CGCCTCGGGAATCGACTCGG+CGG | 0.734091 | 2:-6966274 | None:intergenic |
TTGGATGATGATGACGACGA+CGG | 0.789354 | 2:+6966322 | MsG0280006838.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
! | AATCATTCTGGAAGATGAAA+CGG | - | Chr2:6966155-6966174 | None:intergenic | 30.0% |
! | CATGGATTGAATCATATTCT+CGG | - | Chr2:6966203-6966222 | None:intergenic | 30.0% |
!! | TGTTGGAAGAATTTTCTAGT+AGG | - | Chr2:6966226-6966245 | None:intergenic | 30.0% |
!!! | ACGTTGTTGATTTTCAGATT+CGG | - | Chr2:6966002-6966021 | None:intergenic | 30.0% |
AAAACCGAAAAGGTAGTTCT+CGG | - | Chr2:6966400-6966419 | None:intergenic | 35.0% | |
GATTGAATCATATTCTCGGA+AGG | - | Chr2:6966199-6966218 | None:intergenic | 35.0% | |
! | ATCATTCTGGAAGATGAAAC+GGG | - | Chr2:6966154-6966173 | None:intergenic | 35.0% |
! | CTGAAGCTGAACTTTTTAAC+TGG | + | Chr2:6965963-6965982 | MsG0280006838.01.T01:CDS | 35.0% |
!! | GAAGAATTTTCTAGTAGGCA+TGG | - | Chr2:6966221-6966240 | None:intergenic | 35.0% |
AACTCCTTCCAAAACCGAAA+AGG | - | Chr2:6966410-6966429 | None:intergenic | 40.0% | |
ATCATATTCTCGGAAGGTCT+TGG | - | Chr2:6966193-6966212 | None:intergenic | 40.0% | |
ATTCTTCCAACAATCTGCTC+CGG | + | Chr2:6966234-6966253 | MsG0280006838.01.T01:CDS | 40.0% | |
CTTGAGATAGATCGAAACTC+CGG | - | Chr2:6966057-6966076 | None:intergenic | 40.0% | |
GAGTTGGAAGAACTCTCAAA+GGG | + | Chr2:6966425-6966444 | MsG0280006838.01.T01:CDS | 40.0% | |
TTCGATCTATCTCAAGACTC+CGG | + | Chr2:6966061-6966080 | MsG0280006838.01.T01:CDS | 40.0% | |
! | ATTTTCAGATTCGGAGCTGT+CGG | - | Chr2:6965993-6966012 | None:intergenic | 40.0% |
! | GAGAACTACCTTTTCGGTTT+TGG | + | Chr2:6966399-6966418 | MsG0280006838.01.T01:CDS | 40.0% |
! | TCATTCTGGAAGATGAAACG+GGG | - | Chr2:6966153-6966172 | None:intergenic | 40.0% |
!!! | ACTACCTTTTCGGTTTTGGA+AGG | + | Chr2:6966403-6966422 | MsG0280006838.01.T01:CDS | 40.0% |
!!! | TTTTCGGTTTTGGAAGGAGT+TGG | + | Chr2:6966409-6966428 | MsG0280006838.01.T01:CDS | 40.0% |
ATGAAACGGGGGATTTACCA+CGG | - | Chr2:6966141-6966160 | None:intergenic | 45.0% | |
CGGAAACGAAGGAATCATTC+TGG | - | Chr2:6966167-6966186 | None:intergenic | 45.0% | |
GGAGTTGGAAGAACTCTCAA+AGG | + | Chr2:6966424-6966443 | MsG0280006838.01.T01:CDS | 45.0% | |
TGATAGGACAGCAAGTATGC+CGG | - | Chr2:6966083-6966102 | None:intergenic | 45.0% | |
! | CATTCTGGAAGATGAAACGG+GGG | - | Chr2:6966152-6966171 | None:intergenic | 45.0% |
! | TAGGGATGTTGATGAGCTTG+CGG | + | Chr2:6966297-6966316 | MsG0280006838.01.T01:CDS | 45.0% |
! | TTCGCCGAGAACTACCTTTT+CGG | + | Chr2:6966393-6966412 | MsG0280006838.01.T01:CDS | 45.0% |
! | TTGGATGATGATGACGACGA+CGG | + | Chr2:6966322-6966341 | MsG0280006838.01.T01:CDS | 45.0% |
CAAAGGGAGAGATCTTCGTC+AGG | + | Chr2:6966441-6966460 | MsG0280006838.01.T01:CDS | 50.0% | |
CCTCATGAGATTGTTGCGAG+AGG | + | Chr2:6966361-6966380 | MsG0280006838.01.T01:CDS | 50.0% | |
CCTCTCGCAACAATCTCATG+AGG | - | Chr2:6966364-6966383 | None:intergenic | 50.0% | |
CTCGCAACAATCTCATGAGG+CGG | - | Chr2:6966361-6966380 | None:intergenic | 50.0% | |
GGCATAATCGGAACCTTCAC+CGG | - | Chr2:6966256-6966275 | None:intergenic | 50.0% | |
TCATCAACATCCCTACGCCT+CGG | - | Chr2:6966292-6966311 | None:intergenic | 50.0% | |
TTCTCGGAAGGTCTTGGTCT+CGG | - | Chr2:6966187-6966206 | None:intergenic | 50.0% | |
! | TGTTGATGAGCTTGCGGTGT+TGG | + | Chr2:6966303-6966322 | MsG0280006838.01.T01:CDS | 50.0% |
!! | AATCGACTCGGCGGCATAAT+CGG | - | Chr2:6966268-6966287 | None:intergenic | 50.0% |
!! | GGCATACTTGCTGTCCTATC+AGG | + | Chr2:6966082-6966101 | MsG0280006838.01.T01:CDS | 50.0% |
AACGCTGTTCTGCGCCAAAC+CGG | + | Chr2:6966469-6966488 | MsG0280006838.01.T01:CDS | 55.0% | |
AGCTTCAGTGAGCTCATCGC+CGG | - | Chr2:6965951-6965970 | None:intergenic | 55.0% | |
CATCAACATCCCTACGCCTC+GGG | - | Chr2:6966291-6966310 | None:intergenic | 55.0% | |
CCAACAATCTGCTCCGGTGA+AGG | + | Chr2:6966240-6966259 | MsG0280006838.01.T01:CDS | 55.0% | |
CCTTCACCGGAGCAGATTGT+TGG | - | Chr2:6966243-6966262 | None:intergenic | 55.0% | |
CGAAGGAGCTAACTCGTCAC+CGG | + | Chr2:6966035-6966054 | MsG0280006838.01.T01:CDS | 55.0% | |
CGAGTTAGCTCCTTCGGTTG+AGG | - | Chr2:6966031-6966050 | None:intergenic | 55.0% | |
CGGTGACGAGTTAGCTCCTT+CGG | - | Chr2:6966037-6966056 | None:intergenic | 55.0% | |
GAGATTGTTGCGAGAGGCTC+TGG | + | Chr2:6966367-6966386 | MsG0280006838.01.T01:CDS | 55.0% | |
GGGGATTTACCACGGAACAC+CGG | - | Chr2:6966133-6966152 | None:intergenic | 55.0% | |
GGTCTTGGTCTCGGAAACGA+AGG | - | Chr2:6966178-6966197 | None:intergenic | 55.0% | |
GGTGGAAGGGGAGAAGTTGA+AGG | - | Chr2:6965918-6965937 | None:intergenic | 55.0% | |
GTTAGCTCCTTCGGTTGAGG+TGG | - | Chr2:6966028-6966047 | None:intergenic | 55.0% | |
TTCAGATTCGGAGCTGTCGG+AGG | - | Chr2:6965990-6966009 | None:intergenic | 55.0% | |
ACGTCCACCACCTCAACCGA+AGG | + | Chr2:6966018-6966037 | MsG0280006838.01.T01:CDS | 60.0% | |
AGCTCCTTCGGTTGAGGTGG+TGG | - | Chr2:6966025-6966044 | None:intergenic | 60.0% | |
CTACGCCTCGGGAATCGACT+CGG | - | Chr2:6966280-6966299 | None:intergenic | 60.0% | |
GGGAATCGGCGGTGATAGGA+AGG | - | Chr2:6965869-6965888 | None:intergenic | 60.0% | |
TCGGCGGTGATAGGAAGGTG+TGG | - | Chr2:6965864-6965883 | None:intergenic | 60.0% | |
TTCAGTGAGCTCATCGCCGG+CGG | - | Chr2:6965948-6965967 | None:intergenic | 60.0% | |
! | CGGCGGTGATAGGAAGGTGT+GGG | - | Chr2:6965863-6965882 | None:intergenic | 60.0% |
! | GAGTCGATTCCCGAGGCGTA+GGG | + | Chr2:6966279-6966298 | MsG0280006838.01.T01:CDS | 60.0% |
! | GGCGGTGATAGGAAGGTGTG+GGG | - | Chr2:6965862-6965881 | None:intergenic | 60.0% |
! | TGATGATGACGACGACGGCG+AGG | + | Chr2:6966327-6966346 | MsG0280006838.01.T01:CDS | 60.0% |
!! | AGAAGTTGAAGGCGCCGAGG+AGG | - | Chr2:6965907-6965926 | None:intergenic | 60.0% |
CGATTCACCGCGGCGGTTGT+CGG | - | Chr2:6966110-6966129 | None:intergenic | 65.0% | |
GGAACACCGGCGATTCACCG+CGG | - | Chr2:6966120-6966139 | None:intergenic | 65.0% | |
GGAGGGGAATCGGCGGTGAT+AGG | - | Chr2:6965873-6965892 | None:intergenic | 65.0% | |
GGCGGTTGTCGGAGCCTGAT+AGG | - | Chr2:6966099-6966118 | None:intergenic | 65.0% | |
GGTCGGAGGAGGAGGGGAAT+CGG | - | Chr2:6965883-6965902 | None:intergenic | 65.0% | |
GGTGAATCGCCGGTGTTCCG+TGG | + | Chr2:6966121-6966140 | MsG0280006838.01.T01:CDS | 65.0% | |
! | CGAGTCGATTCCCGAGGCGT+AGG | + | Chr2:6966278-6966297 | MsG0280006838.01.T01:CDS | 65.0% |
!! | AGTTGAAGGCGCCGAGGAGG+CGG | - | Chr2:6965904-6965923 | None:intergenic | 65.0% |
!! | GGGAGAAGTTGAAGGCGCCG+AGG | - | Chr2:6965910-6965929 | None:intergenic | 65.0% |
ACACCGGCGATTCACCGCGG+CGG | - | Chr2:6966117-6966136 | None:intergenic | 70.0% | |
AGGAGGCGGTCGGAGGAGGA+GGG | - | Chr2:6965890-6965909 | None:intergenic | 70.0% | |
AGTGAGCTCATCGCCGGCGG+CGG | - | Chr2:6965945-6965964 | None:intergenic | 70.0% | |
CAACCGCCGCGGTGAATCGC+CGG | + | Chr2:6966111-6966130 | MsG0280006838.01.T01:CDS | 70.0% | |
CGGAGGAGGAGGGGAATCGG+CGG | - | Chr2:6965880-6965899 | None:intergenic | 70.0% | |
TCAGGCTCCGACAACCGCCG+CGG | + | Chr2:6966100-6966119 | MsG0280006838.01.T01:CDS | 70.0% | |
TCCTCCTCCGACCGCCTCCT+CGG | + | Chr2:6965890-6965909 | MsG0280006838.01.T01:CDS | 70.0% | |
! | TGCCGCCGAGTCGATTCCCG+AGG | + | Chr2:6966272-6966291 | MsG0280006838.01.T01:CDS | 70.0% |
!! | CGCCTCGGGAATCGACTCGG+CGG | - | Chr2:6966277-6966296 | None:intergenic | 70.0% |
CCTTCCACCACCTCCGCCGC+CGG | + | Chr2:6965929-6965948 | MsG0280006838.01.T01:CDS | 75.0% | |
GAGGAGGCGGTCGGAGGAGG+AGG | - | Chr2:6965891-6965910 | None:intergenic | 75.0% | |
GGAGGCGGTCGGAGGAGGAG+GGG | - | Chr2:6965889-6965908 | None:intergenic | 75.0% | |
!! | CGGCGGCGGAGGTGGTGGAA+GGG | - | Chr2:6965931-6965950 | None:intergenic | 75.0% |
!! | GAAGGCGCCGAGGAGGCGGT+CGG | - | Chr2:6965900-6965919 | None:intergenic | 75.0% |
!! | GGCGGCGGAGGTGGTGGAAG+GGG | - | Chr2:6965930-6965949 | None:intergenic | 75.0% |
! | ATCGCCGGCGGCGGAGGTGG+TGG | - | Chr2:6965936-6965955 | None:intergenic | 80.0% |
! | CTCATCGCCGGCGGCGGAGG+TGG | - | Chr2:6965939-6965958 | None:intergenic | 80.0% |
! | GAGCTCATCGCCGGCGGCGG+AGG | - | Chr2:6965942-6965961 | None:intergenic | 80.0% |
! | GCCGAGGAGGCGGTCGGAGG+AGG | - | Chr2:6965894-6965913 | None:intergenic | 80.0% |
!!! | CCGGCGGCGGAGGTGGTGGA+AGG | - | Chr2:6965932-6965951 | None:intergenic | 80.0% |
!! | GGCGCCGAGGAGGCGGTCGG+AGG | - | Chr2:6965897-6965916 | None:intergenic | 85.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr2 | gene | 6965854 | 6966504 | 6965854 | ID=MsG0280006838.01;Name=MsG0280006838.01 |
Chr2 | mRNA | 6965854 | 6966504 | 6965854 | ID=MsG0280006838.01.T01;Parent=MsG0280006838.01;Name=MsG0280006838.01.T01;_AED=0.36;_eAED=0.36;_QI=0|-1|0|1|-1|1|1|0|216 |
Chr2 | exon | 6965854 | 6966504 | 6965854 | ID=MsG0280006838.01.T01:exon:7819;Parent=MsG0280006838.01.T01 |
Chr2 | CDS | 6965854 | 6966504 | 6965854 | ID=MsG0280006838.01.T01:cds;Parent=MsG0280006838.01.T01 |
Gene Sequence |
Protein sequence |