AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280006854.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280006854.01.T01 MTR_2g015550 98.874 533 6 0 1 533 1 533 0.0 1109
MsG0280006854.01.T01 MTR_2g006790 82.584 534 67 3 1 533 1 509 0.0 905
MsG0280006854.01.T01 MTR_4g109890 56.530 536 223 6 1 530 1 532 0.0 629
MsG0280006854.01.T01 MTR_2g461670 49.745 589 235 7 1 530 1 587 0.0 598
MsG0280006854.01.T01 MTR_2g027740 47.094 499 256 5 36 533 175 666 4.41e-166 486
MsG0280006854.01.T01 MTR_3g107930 49.789 474 221 6 67 532 122 586 7.56e-161 470
MsG0280006854.01.T01 MTR_3g107930 49.789 474 221 6 67 532 199 663 4.46e-160 471
MsG0280006854.01.T01 MTR_8g092000 48.172 465 231 4 70 533 124 579 1.48e-157 461
MsG0280006854.01.T01 MTR_7g075840 48.498 466 231 5 70 532 203 662 3.19e-155 459
MsG0280006854.01.T01 MTR_8g033360 48.966 435 209 5 70 498 170 597 6.75e-149 444
MsG0280006854.01.T01 MTR_7g055600 48.900 409 202 4 128 532 27 432 1.41e-139 410
MsG0280006854.01.T01 MTR_7g057530 48.900 409 202 4 128 532 27 432 1.41e-139 410
MsG0280006854.01.T01 MTR_6g016380 42.500 480 253 9 72 532 78 553 9.53e-130 389
MsG0280006854.01.T01 MTR_7g012370 42.569 397 198 8 149 521 134 524 3.55e-112 344
MsG0280006854.01.T01 MTR_2g082650 39.753 405 220 8 149 532 9 410 2.12e-110 335
MsG0280006854.01.T01 MTR_2g082650 39.753 405 220 8 149 532 138 539 1.04e-108 335
MsG0280006854.01.T01 MTR_6g013840 43.735 407 199 8 149 531 129 529 3.14e-106 328
MsG0280006854.01.T01 MTR_7g096160 38.178 461 252 8 77 533 222 653 1.69e-104 327
MsG0280006854.01.T01 MTR_4g133570 40.204 393 215 7 158 531 70 461 3.37e-102 315
MsG0280006854.01.T01 MTR_3g452360 37.717 403 236 6 141 530 126 526 1.57e-94 298
MsG0280006854.01.T01 MTR_3g452360 38.786 379 217 6 165 530 1 377 8.29e-94 291
MsG0280006854.01.T01 MTR_1g070490 37.284 464 254 10 75 532 165 597 2.13e-87 282
MsG0280006854.01.T01 MTR_7g012370 40.764 314 159 6 149 441 134 441 2.24e-78 253
MsG0280006854.01.T01 MTR_7g074680 30.556 468 294 10 72 531 118 562 1.35e-57 201
MsG0280006854.01.T01 MTR_7g074680 30.556 468 294 10 72 531 158 602 1.90e-57 202
MsG0280006854.01.T01 MTR_7g074680 30.556 468 294 10 72 531 178 622 3.01e-57 202
MsG0280006854.01.T01 MTR_7g074680 30.556 468 294 10 72 531 178 622 3.23e-57 201
MsG0280006854.01.T01 MTR_7g074680 30.556 468 294 10 72 531 198 642 5.08e-57 201
MsG0280006854.01.T01 MTR_7g074680 29.607 483 296 11 72 531 198 659 1.27e-55 198
MsG0280006854.01.T01 MTR_4g133942 50.746 201 68 4 337 533 160 333 5.87e-54 186
MsG0280006854.01.T01 MTR_3g092310 33.182 220 137 6 315 525 117 335 4.87e-25 106
MsG0280006854.01.T01 MTR_7g109210 33.846 195 120 5 339 524 159 353 3.13e-24 104
MsG0280006854.01.T01 MTR_7g094230 33.143 175 111 4 339 507 151 325 1.89e-22 99.4
MsG0280006854.01.T01 MTR_5g036580 26.452 310 186 11 224 519 75 356 2.10e-22 99.8
MsG0280006854.01.T01 MTR_6g008900 31.401 207 124 7 339 527 165 371 1.53e-21 97.1
MsG0280006854.01.T01 MTR_4g071620 31.401 207 124 7 339 527 165 371 1.53e-21 97.1
MsG0280006854.01.T01 MTR_4g118030 29.907 214 138 8 315 520 122 331 8.95e-21 94.4
MsG0280006854.01.T01 MTR_8g078240 32.796 186 116 5 339 515 142 327 2.60e-20 92.8
MsG0280006854.01.T01 MTR_3g111600 31.522 184 119 5 339 515 80 263 3.89e-19 88.2
MsG0280006854.01.T01 MTR_5g019220 30.660 212 139 6 311 515 139 349 2.91e-18 87.0
MsG0280006854.01.T01 MTR_1g021855 31.892 185 118 5 339 515 165 349 4.91e-18 86.3
MsG0280006854.01.T01 MTR_1g089820 30.151 199 132 5 315 507 131 328 1.32e-15 79.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280006854.01.T01 AT2G20810 80.037 536 104 2 1 533 1 536 0.0 879
MsG0280006854.01.T01 AT1G18580 55.410 536 231 5 1 530 1 534 0.0 604
MsG0280006854.01.T01 AT5G47780 48.511 470 233 4 65 532 152 614 5.76e-166 484
MsG0280006854.01.T01 AT3G61130 47.854 466 235 4 70 533 213 672 9.31e-165 483
MsG0280006854.01.T01 AT4G38270 47.899 476 233 7 67 533 210 679 8.76e-158 466
MsG0280006854.01.T01 AT4G38270 47.899 476 233 7 67 533 206 675 1.77e-157 465
MsG0280006854.01.T01 AT3G25140 51.289 388 183 3 149 532 172 557 1.31e-147 436
MsG0280006854.01.T01 AT2G46480 45.299 468 239 6 70 530 79 536 2.99e-141 419
MsG0280006854.01.T01 AT2G46480 45.299 468 239 6 70 530 92 549 9.11e-141 418
MsG0280006854.01.T01 AT3G02350 45.000 480 241 8 72 532 84 559 1.02e-130 392
MsG0280006854.01.T01 AT2G46480 42.094 468 229 7 70 530 79 511 4.35e-125 376
MsG0280006854.01.T01 AT2G46480 42.094 468 229 7 70 530 92 524 7.32e-125 376
MsG0280006854.01.T01 AT3G01040 40.000 455 240 9 104 531 81 529 1.62e-113 347
MsG0280006854.01.T01 AT3G01040 40.000 455 240 9 104 531 81 529 1.62e-113 347
MsG0280006854.01.T01 AT2G30575 36.419 497 276 8 41 533 149 609 2.71e-109 338
MsG0280006854.01.T01 AT5G15470 42.157 408 206 8 148 531 128 529 3.84e-109 336
MsG0280006854.01.T01 AT5G54690 38.806 402 226 8 150 532 132 532 2.39e-106 328
MsG0280006854.01.T01 AT1G06780 37.525 493 269 9 45 533 131 588 5.73e-106 329
MsG0280006854.01.T01 AT1G06780 37.525 493 269 9 45 533 144 601 1.46e-105 328
MsG0280006854.01.T01 AT3G01040 37.363 455 219 10 104 531 81 496 5.27e-98 306
MsG0280006854.01.T01 AT3G58790 38.875 391 218 8 159 530 16 404 5.94e-89 280
MsG0280006854.01.T01 AT3G58790 37.232 419 235 9 131 530 127 536 1.55e-87 280
MsG0280006854.01.T01 AT2G38650 32.409 469 283 9 72 533 177 618 3.97e-65 223
MsG0280006854.01.T01 AT2G38650 32.409 469 283 9 72 533 177 618 3.97e-65 223
MsG0280006854.01.T01 AT2G38650 31.565 377 227 8 72 443 177 527 2.84e-44 164
MsG0280006854.01.T01 AT1G70090 26.498 317 191 11 224 526 78 366 1.42e-24 106
MsG0280006854.01.T01 AT1G70090 26.498 317 191 11 224 526 78 366 1.42e-24 106
MsG0280006854.01.T01 AT1G24170 25.552 317 194 11 224 526 81 369 5.49e-21 95.5
MsG0280006854.01.T01 AT4G02130 30.102 196 128 5 339 525 150 345 1.24e-20 94.0
MsG0280006854.01.T01 AT4G02130 30.102 196 128 5 339 525 150 345 1.24e-20 94.0
MsG0280006854.01.T01 AT4G02130 30.102 196 128 5 339 525 150 345 1.24e-20 94.0
MsG0280006854.01.T01 AT3G62660 26.962 293 171 9 242 524 99 358 1.59e-20 93.6
MsG0280006854.01.T01 AT1G02720 27.302 315 189 10 222 525 75 360 2.80e-20 93.2
MsG0280006854.01.T01 AT1G02720 27.302 315 189 10 222 525 75 360 2.80e-20 93.2
MsG0280006854.01.T01 AT3G28340 25.965 285 174 10 239 515 84 339 4.37e-20 92.4
MsG0280006854.01.T01 AT1G19300 31.522 184 119 5 339 515 150 333 7.25e-20 91.7
MsG0280006854.01.T01 AT3G06260 29.787 188 124 5 339 520 150 335 1.47e-19 90.9
MsG0280006854.01.T01 AT1G13250 32.787 183 117 4 339 515 144 326 3.97e-18 86.3
MsG0280006854.01.T01 AT3G50760 30.688 189 121 5 337 515 134 322 5.75e-17 82.8

Find 139 sgRNAs with CRISPR-Local

Find 258 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTGATTCTCTAGTTGTTAA+AGG 0.166835 2:-7112287 None:intergenic
TTAAGCATGGACAGATATTT+AGG 0.176518 2:-7112914 None:intergenic
CTTTCCACCATCACTGTTTC+CGG 0.176992 2:-7112870 None:intergenic
AATGAAGAATAGTGGTAATA+AGG 0.252925 2:-7113912 None:intergenic
GATTTGAATGGGAATGTTAA+TGG 0.254551 2:+7113043 MsG0280006854.01.T01:CDS
ACATCTCTTCGGTAATATTA+AGG 0.257268 2:-7112100 None:intergenic
CACTTAGTTCCCAAGCAAAT+TGG 0.261830 2:-7112211 None:intergenic
GATGCATGCGGATGGGCATT+TGG 0.261833 2:+7113154 MsG0280006854.01.T01:CDS
TCAAACCTTGGTGGAAGATT+TGG 0.268192 2:+7113553 MsG0280006854.01.T01:three_prime_UTR
GAGAATAGTTCAAGTATTTA+TGG 0.277457 2:-7113102 None:intergenic
AAACCCCTAAAATTCAGTTT+AGG 0.281389 2:-7110848 None:intergenic
GGATCCATCGTGGCATGTAC+TGG 0.298222 2:+7113327 MsG0280006854.01.T01:CDS
CCTGAAGAAGATCGTGTTCC+TGG 0.305211 2:+7112973 MsG0280006854.01.T01:CDS
GCAAGTGGAGATGAAGATTA+AGG 0.308264 2:+7112565 MsG0280006854.01.T01:CDS
GCACTACAAATGGTGTATAT+TGG 0.320546 2:+7113584 MsG0280006854.01.T01:three_prime_UTR
AACCCCTAAAATTCAGTTTA+GGG 0.323047 2:-7110847 None:intergenic
CCAAACCTTGGTTGAAGATT+GGG 0.323300 2:+7113419 MsG0280006854.01.T01:CDS
TCGTGGCATGTACTGGGTTT+TGG 0.330769 2:+7113334 MsG0280006854.01.T01:CDS
GACAAAATGAATACCTCAAT+TGG 0.334907 2:-7113704 None:intergenic
CCAGGAACACGATCTTCTTC+AGG 0.343617 2:-7112973 None:intergenic
TCAGAAGAAGATTCAAACTT+TGG 0.351252 2:-7110751 None:intergenic
AGTGAAAAGAGTTCAAAATA+TGG 0.351614 2:+7112434 MsG0280006854.01.T01:CDS
TTTAAAAGGTTAAGCATGTT+TGG 0.352372 2:+7113747 MsG0280006854.01.T01:three_prime_UTR
TTGCTTCACTGTTGCAATAG+AGG 0.373248 2:-7113633 None:intergenic
CCCAATCTTCAACCAAGGTT+TGG 0.377804 2:-7113419 None:intergenic
TCCAAACCTTGGTTGAAGAT+TGG 0.380861 2:+7113418 MsG0280006854.01.T01:CDS
TAAGCATGGACAGATATTTA+GGG 0.391103 2:-7112913 None:intergenic
TCATCTGTTCTTCAAGAGCT+TGG 0.400022 2:-7112403 None:intergenic
ATGCATGCGGATGGGCATTT+GGG 0.402621 2:+7113155 MsG0280006854.01.T01:CDS
CATGGCGTATTCATTGATTC+CGG 0.403422 2:+7113779 MsG0280006854.01.T01:three_prime_UTR
AAAGTTGCATTGCTGCAATA+AGG 0.409846 2:-7113491 None:intergenic
TCATAGTTGCACTGTCATAA+TGG 0.413392 2:-7112358 None:intergenic
TTAGGGTTACGAAACTTGAT+AGG 0.418201 2:-7112896 None:intergenic
GCTTATACTGTCTGGGTGTC+CGG 0.419318 2:+7112486 MsG0280006854.01.T01:CDS
ATGAAGAATAGTGGTAATAA+GGG 0.421005 2:-7113911 None:intergenic
TATCTGATCATTAAGTTGTC+TGG 0.431525 2:-7112141 None:intergenic
TAACTGGCATCTACCACTAT+TGG 0.432849 2:+7113218 MsG0280006854.01.T01:CDS
CACCCCACGAAAGTCATTCA+TGG 0.437582 2:-7112744 None:intergenic
CGAGAGAGATCTACACGAAC+TGG 0.437869 2:-7110789 None:intergenic
TTACAACAAAAGCTTTAGCT+AGG 0.438992 2:-7112166 None:intergenic
GTAACAATCTCCAATTTGCT+TGG 0.440025 2:+7112201 MsG0280006854.01.T01:CDS
AGACAGTGCTATCCGAGATA+TGG 0.444268 2:+7112307 MsG0280006854.01.T01:CDS
TGAACCATTCAGTTGTCAAC+CGG 0.445715 2:-7112505 None:intergenic
GGGGCAGTACTGCACTTCAA+TGG 0.454088 2:+7113391 MsG0280006854.01.T01:CDS
AATGCCCATCCGCATGCATC+GGG 0.461211 2:-7113151 None:intergenic
TAACAATCTCCAATTTGCTT+GGG 0.461680 2:+7112202 MsG0280006854.01.T01:CDS
CCATAAAATGTTAATAATCC+AGG 0.463302 2:-7113289 None:intergenic
TTATGGACTAACAGAACCCT+TGG 0.463314 2:+7113306 MsG0280006854.01.T01:CDS
AAACTCGGCACTTTGCCACC+TGG 0.467528 2:+7113271 MsG0280006854.01.T01:CDS
TCAAAATGAGCTCTTATAAG+AGG 0.468247 2:-7113127 None:intergenic
AAAAGAAATTGAAGGACAAA+AGG 0.469978 2:+7112543 MsG0280006854.01.T01:CDS
TAGTTAATTAACAATGCATC+TGG 0.474451 2:-7113941 None:intergenic
GGGCAGTACTGCACTTCAAT+GGG 0.478112 2:+7113392 MsG0280006854.01.T01:CDS
TAATCCACACCAACAACAAA+AGG 0.478579 2:-7114084 None:intergenic
AACACGATCTTCTTCAGGGC+AGG 0.482498 2:-7112968 None:intergenic
AATGCCCACCACAATGCATC+AGG 0.482629 2:-7110925 None:intergenic
GGATTCACAAGCACTACAAA+TGG 0.485093 2:+7113574 MsG0280006854.01.T01:three_prime_UTR
ATATGCTACAACTGAAGATC+CGG 0.485389 2:-7113798 None:intergenic
GAACTTCAAAGTTCAAACCT+TGG 0.487423 2:+7113541 MsG0280006854.01.T01:three_prime_UTR
TCAGGAACCCTTCTCCGTAC+TGG 0.487778 2:-7110907 None:intergenic
CATAATGGAGCTGCTGAGCC+TGG 0.490002 2:-7112343 None:intergenic
GATCCATCGTGGCATGTACT+GGG 0.492139 2:+7113328 MsG0280006854.01.T01:CDS
TTCGAAGGCCAGTACGGAGA+AGG 0.494054 2:+7110899 MsG0280006854.01.T01:CDS
AGACTCAATTTGAGTCCCTC+TGG 0.504318 2:-7110986 None:intergenic
AAATGCCCATCCGCATGCAT+CGG 0.506827 2:-7113152 None:intergenic
TGTCCATGCTTAACCACTTG+AGG 0.508743 2:+7112924 MsG0280006854.01.T01:CDS
GAACCACGACGTCATCGTCC+AGG 0.514466 2:-7112991 None:intergenic
CGATGACGTCGTGGTTCAGA+AGG 0.515338 2:+7112997 MsG0280006854.01.T01:CDS
TCACTGTTGCAATAGAGGAT+TGG 0.515645 2:-7113628 None:intergenic
GTCGGAACTTAACATCTCTT+CGG 0.519106 2:-7112111 None:intergenic
GTGAAGCAATTATTGACTTG+TGG 0.522878 2:+7113647 MsG0280006854.01.T01:three_prime_UTR
CAATTTGCAAAAGAAATTGA+AGG 0.524075 2:+7112535 MsG0280006854.01.T01:CDS
TTGCCATGAATGACTTTCGT+GGG 0.524242 2:+7112741 MsG0280006854.01.T01:CDS
TTGATCCCGATGCATGCGGA+TGG 0.524271 2:+7113146 MsG0280006854.01.T01:CDS
CAGGAACACGATCTTCTTCA+GGG 0.526754 2:-7112972 None:intergenic
GGTCTTGCAATGAAGAATAG+TGG 0.528049 2:-7113920 None:intergenic
TCAATCCCAATCTTCAACCA+AGG 0.528594 2:-7113424 None:intergenic
AATAAATTATGCTTCGATGA+AGG 0.529408 2:+7112712 MsG0280006854.01.T01:CDS
AGAACACACAAAAGTGGTAA+AGG 0.533513 2:-7112595 None:intergenic
GATCCTCAGTTGATAGAAAG+AGG 0.537753 2:+7113370 MsG0280006854.01.T01:CDS
TATGGCTTTATTGTTATACC+AGG 0.538758 2:+7112325 MsG0280006854.01.T01:CDS
CTTCAAAGTTCAAACCTTGG+TGG 0.540472 2:+7113544 MsG0280006854.01.T01:three_prime_UTR
TACATGCCACGATGGATCCA+AGG 0.541821 2:-7113323 None:intergenic
TACAACAAAAGCTTTAGCTA+GGG 0.546643 2:-7112165 None:intergenic
GTCTAGACCGCCTTTGTCCA+AGG 0.549937 2:+7111005 MsG0280006854.01.T01:CDS
TCTTGAAGTTGCTTAAGCAC+AGG 0.555450 2:-7112821 None:intergenic
AAAAGGTTAAGCATGTTTGG+TGG 0.555901 2:+7113750 MsG0280006854.01.T01:three_prime_UTR
TCGAAGGCCAGTACGGAGAA+GGG 0.558622 2:+7110900 MsG0280006854.01.T01:CDS
AGAAGTATGAAGACTTCTCA+TGG 0.559312 2:+7112780 MsG0280006854.01.T01:CDS
GCAATAAATACCTTGGACAA+AGG 0.564738 2:-7111015 None:intergenic
TGGCATCTACCACTATTGGC+AGG 0.567517 2:+7113222 MsG0280006854.01.T01:CDS
ATAACAATAAAGCCATATCT+CGG 0.568216 2:-7112319 None:intergenic
TGATCCCGATGCATGCGGAT+GGG 0.570203 2:+7113147 MsG0280006854.01.T01:CDS
TATCAGAGAACACACAAAAG+TGG 0.570397 2:-7112601 None:intergenic
TCAATGGGAACTCCAAACCT+TGG 0.574241 2:+7113407 MsG0280006854.01.T01:CDS
ACCCCTAAAATTCAGTTTAG+GGG 0.577220 2:-7110846 None:intergenic
AAACCTCAAGTGGTTAAGCA+TGG 0.583737 2:-7112927 None:intergenic
TTAGATGCAAAATCCAATTG+AGG 0.586269 2:+7113691 MsG0280006854.01.T01:three_prime_UTR
ATCCTCAGTTGATAGAAAGA+GGG 0.590332 2:+7113371 MsG0280006854.01.T01:CDS
AGAGAAGAATCTGTGAATTG+CGG 0.590485 2:-7112241 None:intergenic
CAGGGATATAAAACCTCAAG+TGG 0.591983 2:-7112937 None:intergenic
GGCAGGAAAAGAATGTAGAT+CGG 0.596579 2:+7113239 MsG0280006854.01.T01:CDS
TTCAAAATATGGACAAATAG+CGG 0.597495 2:+7112445 MsG0280006854.01.T01:CDS
TTCTCTCAAATGCTGCCACT+AGG 0.598229 2:+7112258 MsG0280006854.01.T01:CDS
AGAATGTAGATCGGACATTG+TGG 0.600112 2:+7113248 MsG0280006854.01.T01:CDS
CAGTTCGTGTAGATCTCTCT+CGG 0.601278 2:+7110790 MsG0280006854.01.T01:five_prime_UTR
CATGTTTGGTGGCTGTAACA+TGG 0.602069 2:+7113761 MsG0280006854.01.T01:three_prime_UTR
GGTTCCTGATGCATTGTGGT+GGG 0.606322 2:+7110921 MsG0280006854.01.T01:CDS
TTATCTATATTCTCACCAGA+GGG 0.611948 2:+7110971 MsG0280006854.01.T01:CDS
GAAAGTCAGTAACAGTAGCA+AGG 0.613276 2:-7113970 None:intergenic
ATTGAAGGACAAAAGGCAAG+TGG 0.619661 2:+7112550 MsG0280006854.01.T01:CDS
AATTTATTTCATCAGTGACA+AGG 0.620020 2:-7112697 None:intergenic
TGACTTTCGTGGGGTGACTG+TGG 0.624497 2:+7112751 MsG0280006854.01.T01:CDS
GATCGGACATTGTGGAAACT+CGG 0.627650 2:+7113256 MsG0280006854.01.T01:CDS
ACATGCCACGATGGATCCAA+GGG 0.630341 2:-7113322 None:intergenic
TTTGCCATGAATGACTTTCG+TGG 0.634111 2:+7112740 MsG0280006854.01.T01:CDS
TTTATCTATATTCTCACCAG+AGG 0.634229 2:+7110970 MsG0280006854.01.T01:CDS
TATAACAACAGAAATACAGA+AGG 0.635332 2:-7110819 None:intergenic
AAGTTGTCTGGTCACCGAGT+CGG 0.637832 2:-7112129 None:intergenic
TATTGACTTGTGGAGCTGAG+AGG 0.639541 2:+7113657 MsG0280006854.01.T01:three_prime_UTR
GGGTTCCTGATGCATTGTGG+TGG 0.643605 2:+7110920 MsG0280006854.01.T01:CDS
TGAATCCAAATCTTCCACCA+AGG 0.645884 2:-7113558 None:intergenic
TCCTCAGTTGATAGAAAGAG+GGG 0.647000 2:+7113372 MsG0280006854.01.T01:CDS
CATCATTGCAACTTCAGTCG+TGG 0.652388 2:+7112625 MsG0280006854.01.T01:CDS
ATAAATACCTTGGACAAAGG+CGG 0.654401 2:-7111012 None:intergenic
ATTATGCTTCGATGAAGGCG+TGG 0.658411 2:+7112717 MsG0280006854.01.T01:CDS
TGCCATGAATGACTTTCGTG+GGG 0.659273 2:+7112742 MsG0280006854.01.T01:CDS
TGGAGCTGTTGAGACATGCA+TGG 0.666652 2:+7113063 MsG0280006854.01.T01:CDS
GCCCCTCTTTCTATCAACTG+AGG 0.668195 2:-7113373 None:intergenic
TAAAATGTTAATAATCCAGG+TGG 0.669793 2:-7113286 None:intergenic
GTTGCAATAGAGGATTGGAA+TGG 0.672812 2:-7113623 None:intergenic
GTGTCCGGTTGACAACTGAA+TGG 0.675940 2:+7112501 MsG0280006854.01.T01:CDS
GAAGGGTTCCTGATGCATTG+TGG 0.677895 2:+7110917 MsG0280006854.01.T01:CDS
AGAGATGTTAAGTTCCGACT+CGG 0.681244 2:+7112115 MsG0280006854.01.T01:CDS
GTTCCTGGACGATGACGTCG+TGG 0.688675 2:+7112988 MsG0280006854.01.T01:CDS
AAACCCAGTACATGCCACGA+TGG 0.692978 2:-7113331 None:intergenic
TGTTAAAGGAGAACGCCTAG+TGG 0.708696 2:-7112273 None:intergenic
ATCATGATTAGAGAATACAT+AGG 0.717138 2:-7114052 None:intergenic
CAGAACCCTTGGATCCATCG+TGG 0.734059 2:+7113317 MsG0280006854.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATGAAGAAAAATTATATTTA+GGG - Chr2:7111830-7111849 None:intergenic 10.0%
!! ATTATATCTTCATTATTATT+GGG + Chr2:7111975-7111994 MsG0280006854.01.T01:intron 10.0%
!! TATGAAGAAAAATTATATTT+AGG - Chr2:7111831-7111850 None:intergenic 10.0%
!! ATCATAAATGAAAAATGAAA+AGG - Chr2:7111325-7111344 None:intergenic 15.0%
!! CATAATTTCATTTATAGTAT+TGG + Chr2:7111847-7111866 MsG0280006854.01.T01:intron 15.0%
!! CATTATATCTTCATTATTAT+TGG + Chr2:7111974-7111993 MsG0280006854.01.T01:intron 15.0%
!! TATGATTGAATAATCTTTAT+TGG + Chr2:7111339-7111358 MsG0280006854.01.T01:intron 15.0%
!! TTATATCTTCATTATTATTG+GGG + Chr2:7111976-7111995 MsG0280006854.01.T01:intron 15.0%
!!! TTTTTTCAATTGATTTGAAT+GGG + Chr2:7113032-7113051 MsG0280006854.01.T01:CDS 15.0%
!! AATTTCATTTCTATTTGGAA+GGG + Chr2:7111085-7111104 MsG0280006854.01.T01:intron 20.0%
!! GTAGTAATTTCATTTCTATT+TGG + Chr2:7111080-7111099 MsG0280006854.01.T01:intron 20.0%
!! TAATTTCATTTCTATTTGGA+AGG + Chr2:7111084-7111103 MsG0280006854.01.T01:intron 20.0%
!! TACATTAGAATATTTCCAAA+GGG + Chr2:7111407-7111426 MsG0280006854.01.T01:intron 20.0%
!! TAGAAATGAAATTACTACAT+AGG - Chr2:7111078-7111097 None:intergenic 20.0%
!! TATATCTTCATTATTATTGG+GGG + Chr2:7111977-7111996 MsG0280006854.01.T01:intron 20.0%
!! TTACAAAAATGATAGGATTA+TGG + Chr2:7112073-7112092 MsG0280006854.01.T01:CDS 20.0%
!!! AAACTATGATTAGAGTTTTA+TGG + Chr2:7114006-7114025 MsG0280006854.01.T01:three_prime_UTR 20.0%
!!! AATATCAATCAGAGTTTTAA+TGG + Chr2:7111433-7111452 MsG0280006854.01.T01:intron 20.0%
!!! AATGGTTTTACAGTTTTAAA+AGG + Chr2:7113733-7113752 MsG0280006854.01.T01:three_prime_UTR 20.0%
!!! AGTTTTAATGGCTAATAATA+TGG + Chr2:7111445-7111464 MsG0280006854.01.T01:intron 20.0%
!!! ATTAGTTTTTCTCTATAGTA+CGG - Chr2:7111804-7111823 None:intergenic 20.0%
!!! ATTCATTTTGTCGTAAAAAA+TGG + Chr2:7113715-7113734 MsG0280006854.01.T01:three_prime_UTR 20.0%
!!! ATTTTGATTTGAGCTTTAAT+TGG + Chr2:7113519-7113538 MsG0280006854.01.T01:exon 20.0%
!!! CTTTTTTCAATTGATTTGAA+TGG + Chr2:7113031-7113050 MsG0280006854.01.T01:CDS 20.0%
!!! GGAGAAATAATATTTTGTTT+GGG - Chr2:7110733-7110752 None:intergenic 20.0%
!!! TGGAGAAATAATATTTTGTT+TGG - Chr2:7110734-7110753 None:intergenic 20.0%
! AAAAATGATAGGATTATGGA+AGG + Chr2:7112077-7112096 MsG0280006854.01.T01:CDS 25.0%
! AAAAGAAATTGAAGGACAAA+AGG + Chr2:7112543-7112562 MsG0280006854.01.T01:CDS 25.0%
! AAGAAGTTATTAGCTAAACA+AGG - Chr2:7112032-7112051 None:intergenic 25.0%
! AATAAATTATGCTTCGATGA+AGG + Chr2:7112712-7112731 MsG0280006854.01.T01:CDS 25.0%
! AATGAAGAATAGTGGTAATA+AGG - Chr2:7113915-7113934 None:intergenic 25.0%
! AATTTATTTCATCAGTGACA+AGG - Chr2:7112700-7112719 None:intergenic 25.0%
! AGAGAACTTACAAAAATGAT+AGG + Chr2:7112066-7112085 MsG0280006854.01.T01:intron 25.0%
! AGTGAAAAGAGTTCAAAATA+TGG + Chr2:7112434-7112453 MsG0280006854.01.T01:CDS 25.0%
! ATAACAATAAAGCCATATCT+CGG - Chr2:7112322-7112341 None:intergenic 25.0%
! ATCATGATTAGAGAATACAT+AGG - Chr2:7114055-7114074 None:intergenic 25.0%
! ATGAAGAATAGTGGTAATAA+GGG - Chr2:7113914-7113933 None:intergenic 25.0%
! CAATTTGCAAAAGAAATTGA+AGG + Chr2:7112535-7112554 MsG0280006854.01.T01:CDS 25.0%
! CCATAAAATGTTAATAATCC+AGG - Chr2:7113292-7113311 None:intergenic 25.0%
! CTACATTAGAATATTTCCAA+AGG + Chr2:7111406-7111425 MsG0280006854.01.T01:intron 25.0%
! GAGAATAGTTCAAGTATTTA+TGG - Chr2:7113105-7113124 None:intergenic 25.0%
! TAAAATGTTAATAATCCAGG+TGG - Chr2:7113289-7113308 None:intergenic 25.0%
! TAGTTAATTAACAATGCATC+TGG - Chr2:7113944-7113963 None:intergenic 25.0%
! TATAACAACAGAAATACAGA+AGG - Chr2:7110822-7110841 None:intergenic 25.0%
! TTACAATCTCAACATTTAGT+TGG + Chr2:7111185-7111204 MsG0280006854.01.T01:intron 25.0%
! TTCAAAATATGGACAAATAG+CGG + Chr2:7112445-7112464 MsG0280006854.01.T01:CDS 25.0%
! TTTAAAAGGTTAAGCATGTT+TGG + Chr2:7113747-7113766 MsG0280006854.01.T01:three_prime_UTR 25.0%
!! AAATTCTAAAAATCCCAACA+TGG + Chr2:7112664-7112683 MsG0280006854.01.T01:CDS 25.0%
!! AATCAATATGTTTTTCCCAT+AGG - Chr2:7113462-7113481 None:intergenic 25.0%
!! ATCAATATGTTTTTCCCATA+GGG - Chr2:7113461-7113480 None:intergenic 25.0%
!! ATTGGTAAATGTTTTGCAAT+AGG + Chr2:7111714-7111733 MsG0280006854.01.T01:intron 25.0%
!! CAAGTTTTTAATACATCACA+TGG + Chr2:7111650-7111669 MsG0280006854.01.T01:intron 25.0%
!! CCTGGATTATTAACATTTTA+TGG + Chr2:7113289-7113308 MsG0280006854.01.T01:CDS 25.0%
!! CTCTAATCATAGTTTCTTTT+TGG - Chr2:7114001-7114020 None:intergenic 25.0%
!! CTTAAACTTGCTTAAGTAAT+TGG + Chr2:7111905-7111924 MsG0280006854.01.T01:intron 25.0%
!! TCAATTTCTTTTGCAAATTG+AGG - Chr2:7112535-7112554 None:intergenic 25.0%
!!! ATGTTTTTGATTTGGTTGAA+TGG + Chr2:7113182-7113201 MsG0280006854.01.T01:CDS 25.0%
!!! TTGGAAATTCATTTTGTTTC+CGG + Chr2:7111266-7111285 MsG0280006854.01.T01:intron 25.0%
AAAACTTGCAAAGTGTAAGT+TGG - Chr2:7111638-7111657 None:intergenic 30.0%
AAACCCCTAAAATTCAGTTT+AGG - Chr2:7110851-7110870 None:intergenic 30.0%
AACCCCTAAAATTCAGTTTA+GGG - Chr2:7110850-7110869 None:intergenic 30.0%
ACATCTCTTCGGTAATATTA+AGG - Chr2:7112103-7112122 None:intergenic 30.0%
ATATATAGTCAACTAGCACA+TGG - Chr2:7111301-7111320 None:intergenic 30.0%
CTGATTGATATTATACCCTT+TGG - Chr2:7111425-7111444 None:intergenic 30.0%
CTTTATTGGATAGAAACAAC+TGG + Chr2:7111353-7111372 MsG0280006854.01.T01:intron 30.0%
GACAAAATGAATACCTCAAT+TGG - Chr2:7113707-7113726 None:intergenic 30.0%
GATTTGAATGGGAATGTTAA+TGG + Chr2:7113043-7113062 MsG0280006854.01.T01:CDS 30.0%
GGAAAAAGCAATAAATACCT+TGG - Chr2:7111025-7111044 None:intergenic 30.0%
TAAGCATGGACAGATATTTA+GGG - Chr2:7112916-7112935 None:intergenic 30.0%
TCAAAATGAGCTCTTATAAG+AGG - Chr2:7113130-7113149 None:intergenic 30.0%
TCAACTCAATAAGTTAGGAT+AGG + Chr2:7111147-7111166 MsG0280006854.01.T01:intron 30.0%
TCAATAAGTTAGGATAGGAT+AGG + Chr2:7111152-7111171 MsG0280006854.01.T01:intron 30.0%
TCACTTCAACTCAATAAGTT+AGG + Chr2:7111142-7111161 MsG0280006854.01.T01:intron 30.0%
TCAGAAGAAGATTCAAACTT+TGG - Chr2:7110754-7110773 None:intergenic 30.0%
TCTGATTCTCTAGTTGTTAA+AGG - Chr2:7112290-7112309 None:intergenic 30.0%
TTAAGCATGGACAGATATTT+AGG - Chr2:7112917-7112936 None:intergenic 30.0%
TTAGATGCAAAATCCAATTG+AGG + Chr2:7113691-7113710 MsG0280006854.01.T01:three_prime_UTR 30.0%
TTATCTATATTCTCACCAGA+GGG + Chr2:7110971-7110990 MsG0280006854.01.T01:CDS 30.0%
TTTATCTATATTCTCACCAG+AGG + Chr2:7110970-7110989 MsG0280006854.01.T01:CDS 30.0%
! CAATTATATGAAGAGCGTAT+TGG + Chr2:7111696-7111715 MsG0280006854.01.T01:intron 30.0%
! TAACAATCTCCAATTTGCTT+GGG + Chr2:7112202-7112221 MsG0280006854.01.T01:CDS 30.0%
! TACAACAAAAGCTTTAGCTA+GGG - Chr2:7112168-7112187 None:intergenic 30.0%
! TATCTGATCATTAAGTTGTC+TGG - Chr2:7112144-7112163 None:intergenic 30.0%
! TCAATATGTTTTTCCCATAG+GGG - Chr2:7113460-7113479 None:intergenic 30.0%
! TCAATTGGATTTTGCATCTA+AGG - Chr2:7113692-7113711 None:intergenic 30.0%
! TTACAACAAAAGCTTTAGCT+AGG - Chr2:7112169-7112188 None:intergenic 30.0%
! TTCCCCTAAACTGAATTTTA+GGG + Chr2:7110844-7110863 MsG0280006854.01.T01:five_prime_UTR 30.0%
! TTTCCCCTAAACTGAATTTT+AGG + Chr2:7110843-7110862 MsG0280006854.01.T01:five_prime_UTR 30.0%
!! AAACTGAATTTTAGGGGTTT+TGG + Chr2:7110851-7110870 MsG0280006854.01.T01:five_prime_UTR 30.0%
!! AAATTTTTGAGCAAGAGATC+TGG - Chr2:7111046-7111065 None:intergenic 30.0%
!! ATACAAAGCTACTACTTTTC+CGG + Chr2:7112851-7112870 MsG0280006854.01.T01:CDS 30.0%
!! ATGTTTTAAATCCCTATTGC+GGG + Chr2:7111492-7111511 MsG0280006854.01.T01:intron 30.0%
!! ATTCAACATCCTTTTGTTGT+TGG + Chr2:7114075-7114094 MsG0280006854.01.T01:three_prime_UTR 30.0%
!! GATGTTTTAAATCCCTATTG+CGG + Chr2:7111491-7111510 MsG0280006854.01.T01:intron 30.0%
!! TATGGCTTTATTGTTATACC+AGG + Chr2:7112325-7112344 MsG0280006854.01.T01:CDS 30.0%
!! TGGGATGAATGTTTTTGATT+TGG + Chr2:7113174-7113193 MsG0280006854.01.T01:CDS 30.0%
!!! TTTTTGATTTGGTTGAATGG+AGG + Chr2:7113185-7113204 MsG0280006854.01.T01:CDS 30.0%
AAAAGGTTAAGCATGTTTGG+TGG + Chr2:7113750-7113769 MsG0280006854.01.T01:three_prime_UTR 35.0%
AAAGTTGCATTGCTGCAATA+AGG - Chr2:7113494-7113513 None:intergenic 35.0%
AAGGTGAAAAACAACCATGT+TGG - Chr2:7112681-7112700 None:intergenic 35.0%
ACCAAAAAGCTTATACTGTC+TGG + Chr2:7112478-7112497 MsG0280006854.01.T01:CDS 35.0%
ACCCCTAAAATTCAGTTTAG+GGG - Chr2:7110849-7110868 None:intergenic 35.0%
AGAACACACAAAAGTGGTAA+AGG - Chr2:7112598-7112617 None:intergenic 35.0%
AGAGAAGAATCTGTGAATTG+CGG - Chr2:7112244-7112263 None:intergenic 35.0%
AGGTGAAAAACAACCATGTT+GGG - Chr2:7112680-7112699 None:intergenic 35.0%
ATAAATACCTTGGACAAAGG+CGG - Chr2:7111015-7111034 None:intergenic 35.0%
ATAGTATGCTGAGATGATGT+TGG + Chr2:7111247-7111266 MsG0280006854.01.T01:intron 35.0%
ATATGCTACAACTGAAGATC+CGG - Chr2:7113801-7113820 None:intergenic 35.0%
CCAAAAAGCTTATACTGTCT+GGG + Chr2:7112479-7112498 MsG0280006854.01.T01:CDS 35.0%
GAACTTCAAAGTTCAAACCT+TGG + Chr2:7113541-7113560 MsG0280006854.01.T01:three_prime_UTR 35.0%
GCAATAAATACCTTGGACAA+AGG - Chr2:7111018-7111037 None:intergenic 35.0%
GCACTACAAATGGTGTATAT+TGG + Chr2:7113584-7113603 MsG0280006854.01.T01:three_prime_UTR 35.0%
TAGCACATGGTACATAATTC+CGG - Chr2:7111288-7111307 None:intergenic 35.0%
TATCAGAGAACACACAAAAG+TGG - Chr2:7112604-7112623 None:intergenic 35.0%
TCATAGTTGCACTGTCATAA+TGG - Chr2:7112361-7112380 None:intergenic 35.0%
TCATTATTATTGGGGGATAG+AGG + Chr2:7111984-7112003 MsG0280006854.01.T01:intron 35.0%
TGAAAAATACAAGCCCCTAT+GGG + Chr2:7113444-7113463 MsG0280006854.01.T01:CDS 35.0%
TGGAGGAAAAAGAATGTAAC+TGG + Chr2:7113202-7113221 MsG0280006854.01.T01:CDS 35.0%
TTAGGGTTACGAAACTTGAT+AGG - Chr2:7112899-7112918 None:intergenic 35.0%
TTGAAAAATACAAGCCCCTA+TGG + Chr2:7113443-7113462 MsG0280006854.01.T01:CDS 35.0%
! AGAAGTATGAAGACTTCTCA+TGG + Chr2:7112780-7112799 MsG0280006854.01.T01:CDS 35.0%
! GGGATTTAAAACATCTGATC+TGG - Chr2:7111486-7111505 None:intergenic 35.0%
! GTAACAATCTCCAATTTGCT+TGG + Chr2:7112201-7112220 MsG0280006854.01.T01:CDS 35.0%
! TAATTGGAACATAGCTTGCA+TGG + Chr2:7111921-7111940 MsG0280006854.01.T01:intron 35.0%
! TCCCCTAAACTGAATTTTAG+GGG + Chr2:7110845-7110864 MsG0280006854.01.T01:five_prime_UTR 35.0%
!! ATCCTCAGTTGATAGAAAGA+GGG + Chr2:7113371-7113390 MsG0280006854.01.T01:CDS 35.0%
!! GTGAAGCAATTATTGACTTG+TGG + Chr2:7113647-7113666 MsG0280006854.01.T01:three_prime_UTR 35.0%
!! TGTTTTAAATCCCTATTGCG+GGG + Chr2:7111493-7111512 MsG0280006854.01.T01:intron 35.0%
!!! TTTAGGGGTTTTGGAAAATG+AGG + Chr2:7110860-7110879 MsG0280006854.01.T01:exon 35.0%
AAACCTCAAGTGGTTAAGCA+TGG - Chr2:7112930-7112949 None:intergenic 40.0%
ACTTGCAACAAGAGAACACA+TGG - Chr2:7111760-7111779 None:intergenic 40.0%
AGAATGTAGATCGGACATTG+TGG + Chr2:7113248-7113267 MsG0280006854.01.T01:CDS 40.0%
AGAGATGTTAAGTTCCGACT+CGG + Chr2:7112115-7112134 MsG0280006854.01.T01:CDS 40.0%
ATTGAAGGACAAAAGGCAAG+TGG + Chr2:7112550-7112569 MsG0280006854.01.T01:CDS 40.0%
CACTTAGTTCCCAAGCAAAT+TGG - Chr2:7112214-7112233 None:intergenic 40.0%
CAGGGATATAAAACCTCAAG+TGG - Chr2:7112940-7112959 None:intergenic 40.0%
CCAAACCTTGGTTGAAGATT+GGG + Chr2:7113419-7113438 MsG0280006854.01.T01:CDS 40.0%
CTCTTGTTGCAAGTTATGTC+AGG + Chr2:7111766-7111785 MsG0280006854.01.T01:intron 40.0%
CTTCAAAGTTCAAACCTTGG+TGG + Chr2:7113544-7113563 MsG0280006854.01.T01:three_prime_UTR 40.0%
GAAAGTCAGTAACAGTAGCA+AGG - Chr2:7113973-7113992 None:intergenic 40.0%
GAAATCGAACCTGAAACCTT+GGG + Chr2:7111576-7111595 MsG0280006854.01.T01:intron 40.0%
GCAAGTGGAGATGAAGATTA+AGG + Chr2:7112565-7112584 MsG0280006854.01.T01:CDS 40.0%
GGATTCACAAGCACTACAAA+TGG + Chr2:7113574-7113593 MsG0280006854.01.T01:three_prime_UTR 40.0%
GGCAGGAAAAGAATGTAGAT+CGG + Chr2:7113239-7113258 MsG0280006854.01.T01:CDS 40.0%
GGTCTTGCAATGAAGAATAG+TGG - Chr2:7113923-7113942 None:intergenic 40.0%
GTCGGAACTTAACATCTCTT+CGG - Chr2:7112114-7112133 None:intergenic 40.0%
GTTGCAATAGAGGATTGGAA+TGG - Chr2:7113626-7113645 None:intergenic 40.0%
TAACTGGCATCTACCACTAT+TGG + Chr2:7113218-7113237 MsG0280006854.01.T01:CDS 40.0%
TCAAACCTTGGTGGAAGATT+TGG + Chr2:7113553-7113572 MsG0280006854.01.T01:three_prime_UTR 40.0%
TCAATCCCAATCTTCAACCA+AGG - Chr2:7113427-7113446 None:intergenic 40.0%
TCACTGTTGCAATAGAGGAT+TGG - Chr2:7113631-7113650 None:intergenic 40.0%
TCATCTGTTCTTCAAGAGCT+TGG - Chr2:7112406-7112425 None:intergenic 40.0%
TCCAAACCTTGGTTGAAGAT+TGG + Chr2:7113418-7113437 MsG0280006854.01.T01:CDS 40.0%
TCTTGAAGTTGCTTAAGCAC+AGG - Chr2:7112824-7112843 None:intergenic 40.0%
TGAACCATTCAGTTGTCAAC+CGG - Chr2:7112508-7112527 None:intergenic 40.0%
TGAATCCAAATCTTCCACCA+AGG - Chr2:7113561-7113580 None:intergenic 40.0%
TGTGTGAGATGTGAGTTCAA+TGG + Chr2:7111379-7111398 MsG0280006854.01.T01:intron 40.0%
TTGCCATGAATGACTTTCGT+GGG + Chr2:7112741-7112760 MsG0280006854.01.T01:CDS 40.0%
TTGCTTCACTGTTGCAATAG+AGG - Chr2:7113636-7113655 None:intergenic 40.0%
TTTGCCATGAATGACTTTCG+TGG + Chr2:7112740-7112759 MsG0280006854.01.T01:CDS 40.0%
! CATTCTTTTCCTGCCAATAG+TGG - Chr2:7113234-7113253 None:intergenic 40.0%
! CCCAGACAGTATAAGCTTTT+TGG - Chr2:7112482-7112501 None:intergenic 40.0%
! GTAGAGCAACAGATTTTCGA+AGG + Chr2:7110884-7110903 MsG0280006854.01.T01:CDS 40.0%
! TACTTTTCCGGAAACAGTGA+TGG + Chr2:7112863-7112882 MsG0280006854.01.T01:CDS 40.0%
! TTATGGACTAACAGAACCCT+TGG + Chr2:7113306-7113325 MsG0280006854.01.T01:CDS 40.0%
! TTTTAAATCCCTATTGCGGG+GGG + Chr2:7111495-7111514 MsG0280006854.01.T01:intron 40.0%
!! AGCTTTGCTCTGGCTTTAAA+TGG - Chr2:7111522-7111541 None:intergenic 40.0%
!! CATGGCGTATTCATTGATTC+CGG + Chr2:7113779-7113798 MsG0280006854.01.T01:three_prime_UTR 40.0%
!! GATCCTCAGTTGATAGAAAG+AGG + Chr2:7113370-7113389 MsG0280006854.01.T01:CDS 40.0%
!! GCTTTGCTCTGGCTTTAAAT+GGG - Chr2:7111521-7111540 None:intergenic 40.0%
!! GTTTTAAATCCCTATTGCGG+GGG + Chr2:7111494-7111513 MsG0280006854.01.T01:intron 40.0%
!! TCCTCAGTTGATAGAAAGAG+GGG + Chr2:7113372-7113391 MsG0280006854.01.T01:CDS 40.0%
AAGATTCCAAGCCAACCACT+AGG + Chr2:7111612-7111631 MsG0280006854.01.T01:intron 45.0%
AGACAGTGCTATCCGAGATA+TGG + Chr2:7112307-7112326 MsG0280006854.01.T01:CDS 45.0%
AGACTCAATTTGAGTCCCTC+TGG - Chr2:7110989-7111008 None:intergenic 45.0%
ATTATGCTTCGATGAAGGCG+TGG + Chr2:7112717-7112736 MsG0280006854.01.T01:CDS 45.0%
ATTATTGGGGGATAGAGGTG+CGG + Chr2:7111989-7112008 MsG0280006854.01.T01:intron 45.0%
CAGGAACACGATCTTCTTCA+GGG - Chr2:7112975-7112994 None:intergenic 45.0%
CAGTTCGTGTAGATCTCTCT+CGG + Chr2:7110790-7110809 MsG0280006854.01.T01:five_prime_UTR 45.0%
CATCATTGCAACTTCAGTCG+TGG + Chr2:7112625-7112644 MsG0280006854.01.T01:CDS 45.0%
CCCAATCTTCAACCAAGGTT+TGG - Chr2:7113422-7113441 None:intergenic 45.0%
CTTTCCACCATCACTGTTTC+CGG - Chr2:7112873-7112892 None:intergenic 45.0%
GATCGGACATTGTGGAAACT+CGG + Chr2:7113256-7113275 MsG0280006854.01.T01:CDS 45.0%
GGAAATCGAACCTGAAACCT+TGG + Chr2:7111575-7111594 MsG0280006854.01.T01:intron 45.0%
GTCCATACAAAGCTTTGCTC+TGG - Chr2:7111532-7111551 None:intergenic 45.0%
TCAATGGGAACTCCAAACCT+TGG + Chr2:7113407-7113426 MsG0280006854.01.T01:CDS 45.0%
TCAGGGCAGGAAAAACTTCA+GGG - Chr2:7112958-7112977 None:intergenic 45.0%
TGCCATGAATGACTTTCGTG+GGG + Chr2:7112742-7112761 MsG0280006854.01.T01:CDS 45.0%
TGTCCATGCTTAACCACTTG+AGG + Chr2:7112924-7112943 MsG0280006854.01.T01:CDS 45.0%
TGTTAAAGGAGAACGCCTAG+TGG - Chr2:7112276-7112295 None:intergenic 45.0%
TTCAGGGCAGGAAAAACTTC+AGG - Chr2:7112959-7112978 None:intergenic 45.0%
TTCTCTCAAATGCTGCCACT+AGG + Chr2:7112258-7112277 MsG0280006854.01.T01:CDS 45.0%
! AGCCAGAGCAAAGCTTTGTA+TGG + Chr2:7111527-7111546 MsG0280006854.01.T01:intron 45.0%
! CAAAGTGTAAGTTGGCCTAG+TGG - Chr2:7111630-7111649 None:intergenic 45.0%
! CAGATTTTCGAAGGCCAGTA+CGG + Chr2:7110893-7110912 MsG0280006854.01.T01:CDS 45.0%
! CATGTTTGGTGGCTGTAACA+TGG + Chr2:7113761-7113780 MsG0280006854.01.T01:three_prime_UTR 45.0%
! TTTTCCGGAAACAGTGATGG+TGG + Chr2:7112866-7112885 MsG0280006854.01.T01:CDS 45.0%
!! CATTTTGATCCCGATGCATG+CGG + Chr2:7113142-7113161 MsG0280006854.01.T01:CDS 45.0%
!! TAGTGGTTGGCTTGGAATCT+TGG - Chr2:7111613-7111632 None:intergenic 45.0%
!! TATTGACTTGTGGAGCTGAG+AGG + Chr2:7113657-7113676 MsG0280006854.01.T01:three_prime_UTR 45.0%
AAACCCAGTACATGCCACGA+TGG - Chr2:7113334-7113353 None:intergenic 50.0%
AAATGCCCATCCGCATGCAT+CGG - Chr2:7113155-7113174 None:intergenic 50.0%
AACACGATCTTCTTCAGGGC+AGG - Chr2:7112971-7112990 None:intergenic 50.0%
AAGTTGTCTGGTCACCGAGT+CGG - Chr2:7112132-7112151 None:intergenic 50.0%
AATGCCCACCACAATGCATC+AGG - Chr2:7110928-7110947 None:intergenic 50.0%
ACATGCCACGATGGATCCAA+GGG - Chr2:7113325-7113344 None:intergenic 50.0%
ATCGAACCTGAAACCTTGGG+AGG + Chr2:7111579-7111598 MsG0280006854.01.T01:intron 50.0%
ATGCATGCGGATGGGCATTT+GGG + Chr2:7113155-7113174 MsG0280006854.01.T01:CDS 50.0%
CACCCCACGAAAGTCATTCA+TGG - Chr2:7112747-7112766 None:intergenic 50.0%
CCAGGAACACGATCTTCTTC+AGG - Chr2:7112976-7112995 None:intergenic 50.0%
CCTGAAGAAGATCGTGTTCC+TGG + Chr2:7112973-7112992 MsG0280006854.01.T01:CDS 50.0%
CGAGAGAGATCTACACGAAC+TGG - Chr2:7110792-7110811 None:intergenic 50.0%
GAAGGGTTCCTGATGCATTG+TGG + Chr2:7110917-7110936 MsG0280006854.01.T01:CDS 50.0%
GATCCATCGTGGCATGTACT+GGG + Chr2:7113328-7113347 MsG0280006854.01.T01:CDS 50.0%
GCCCCTCTTTCTATCAACTG+AGG - Chr2:7113376-7113395 None:intergenic 50.0%
GCTTATACTGTCTGGGTGTC+CGG + Chr2:7112486-7112505 MsG0280006854.01.T01:CDS 50.0%
GGGCAGTACTGCACTTCAAT+GGG + Chr2:7113392-7113411 MsG0280006854.01.T01:CDS 50.0%
GGTTCCTGATGCATTGTGGT+GGG + Chr2:7110921-7110940 MsG0280006854.01.T01:CDS 50.0%
GTGTCCGGTTGACAACTGAA+TGG + Chr2:7112501-7112520 MsG0280006854.01.T01:CDS 50.0%
TACATGCCACGATGGATCCA+AGG - Chr2:7113326-7113345 None:intergenic 50.0%
TGGAGCTGTTGAGACATGCA+TGG + Chr2:7113063-7113082 MsG0280006854.01.T01:CDS 50.0%
TGGCATCTACCACTATTGGC+AGG + Chr2:7113222-7113241 MsG0280006854.01.T01:CDS 50.0%
! GATTTCCCCGGTGCCAATTT+CGG - Chr2:7111562-7111581 None:intergenic 50.0%
! GTGTAAGTTGGCCTAGTGGT+TGG - Chr2:7111626-7111645 None:intergenic 50.0%
! TCGTGGCATGTACTGGGTTT+TGG + Chr2:7113334-7113353 MsG0280006854.01.T01:CDS 50.0%
!! GGTTTCAGGTTCGATTTCCC+CGG - Chr2:7111574-7111593 None:intergenic 50.0%
AAACTCGGCACTTTGCCACC+TGG + Chr2:7113271-7113290 MsG0280006854.01.T01:CDS 55.0%
AATGCCCATCCGCATGCATC+GGG - Chr2:7113154-7113173 None:intergenic 55.0%
ATGGACTTGCCCGCCGAAAT+TGG + Chr2:7111546-7111565 MsG0280006854.01.T01:intron 55.0%
CAGAACCCTTGGATCCATCG+TGG + Chr2:7113317-7113336 MsG0280006854.01.T01:CDS 55.0%
CGATGACGTCGTGGTTCAGA+AGG + Chr2:7112997-7113016 MsG0280006854.01.T01:CDS 55.0%
GATGCATGCGGATGGGCATT+TGG + Chr2:7113154-7113173 MsG0280006854.01.T01:CDS 55.0%
GGATCCATCGTGGCATGTAC+TGG + Chr2:7113327-7113346 MsG0280006854.01.T01:CDS 55.0%
GGGGCAGTACTGCACTTCAA+TGG + Chr2:7113391-7113410 MsG0280006854.01.T01:CDS 55.0%
GGGTTCCTGATGCATTGTGG+TGG + Chr2:7110920-7110939 MsG0280006854.01.T01:CDS 55.0%
GTCTAGACCGCCTTTGTCCA+AGG + Chr2:7111005-7111024 MsG0280006854.01.T01:CDS 55.0%
TAAATGGGCCCCCCGCAATA+GGG - Chr2:7111506-7111525 None:intergenic 55.0%
TCAGGAACCCTTCTCCGTAC+TGG - Chr2:7110910-7110929 None:intergenic 55.0%
TCGAAGGCCAGTACGGAGAA+GGG + Chr2:7110900-7110919 MsG0280006854.01.T01:CDS 55.0%
TGACTTTCGTGGGGTGACTG+TGG + Chr2:7112751-7112770 MsG0280006854.01.T01:CDS 55.0%
TGATCCCGATGCATGCGGAT+GGG + Chr2:7113147-7113166 MsG0280006854.01.T01:CDS 55.0%
TGTGCTCCTCCCAAGGTTTC+AGG - Chr2:7111588-7111607 None:intergenic 55.0%
TTAAATGGGCCCCCCGCAAT+AGG - Chr2:7111507-7111526 None:intergenic 55.0%
TTCGAAGGCCAGTACGGAGA+AGG + Chr2:7110899-7110918 MsG0280006854.01.T01:CDS 55.0%
TTGATCCCGATGCATGCGGA+TGG + Chr2:7113146-7113165 MsG0280006854.01.T01:CDS 55.0%
! AGGTGCGGTGATGGTGAGTT+TGG + Chr2:7112004-7112023 MsG0280006854.01.T01:intron 55.0%
! AGTTGGCCTAGTGGTTGGCT+TGG - Chr2:7111621-7111640 None:intergenic 55.0%
! CATAATGGAGCTGCTGAGCC+TGG - Chr2:7112346-7112365 None:intergenic 55.0%
! GGTGCGGTGATGGTGAGTTT+GGG + Chr2:7112005-7112024 MsG0280006854.01.T01:intron 55.0%
CTTGGAGTGTGCTCCTCCCA+AGG - Chr2:7111595-7111614 None:intergenic 60.0%
GAACCACGACGTCATCGTCC+AGG - Chr2:7112994-7113013 None:intergenic 60.0%
GTTCCTGGACGATGACGTCG+TGG + Chr2:7112988-7113007 MsG0280006854.01.T01:CDS 60.0%
TTGCCCGCCGAAATTGGCAC+CGG + Chr2:7111552-7111571 MsG0280006854.01.T01:intron 60.0%
! TTCCCCGGTGCCAATTTCGG+CGG - Chr2:7111559-7111578 None:intergenic 60.0%
TGCCCGCCGAAATTGGCACC+GGG + Chr2:7111553-7111572 MsG0280006854.01.T01:intron 65.0%
! GGGGGATAGAGGTGCGGTGA+TGG + Chr2:7111995-7112014 MsG0280006854.01.T01:intron 65.0%
! TCCCCGGTGCCAATTTCGGC+GGG - Chr2:7111558-7111577 None:intergenic 65.0%
GCCCGCCGAAATTGGCACCG+GGG + Chr2:7111554-7111573 MsG0280006854.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr2 gene 7110702 7114099 7110702 ID=MsG0280006854.01;Name=MsG0280006854.01
Chr2 mRNA 7110702 7114099 7110702 ID=MsG0280006854.01.T01;Parent=MsG0280006854.01;Name=MsG0280006854.01.T01;_AED=0.43;_eAED=0.43;_QI=175|1|1|1|1|1|2|580|533
Chr2 exon 7110702 7111026 7110702 ID=MsG0280006854.01.T01:exon:2054;Parent=MsG0280006854.01.T01
Chr2 exon 7112068 7114099 7112068 ID=MsG0280006854.01.T01:exon:2055;Parent=MsG0280006854.01.T01
Chr2 five_prime_UTR 7110702 7110876 7110702 ID=MsG0280006854.01.T01:five_prime_utr;Parent=MsG0280006854.01.T01
Chr2 CDS 7110877 7111026 7110877 ID=MsG0280006854.01.T01:cds;Parent=MsG0280006854.01.T01
Chr2 CDS 7112068 7113519 7112068 ID=MsG0280006854.01.T01:cds;Parent=MsG0280006854.01.T01
Chr2 three_prime_UTR 7113520 7114099 7113520 ID=MsG0280006854.01.T01:three_prime_utr;Parent=MsG0280006854.01.T01
Gene Sequence

>MsG0280006854.01.T01

ATGAGGCGTAGAGCAACAGATTTTCGAAGGCCAGTACGGAGAAGGGTTCCTGATGCATTGTGGTGGGCATTGTGCTGTGCAGTTGTTCTTCTATTTATCTATATTCTCACCAGAGGGACTCAAATTGAGTCTAGACCGCCTTTGTCCAAGAGAACTTACAAAAATGATAGGATTATGGAAGGCCTTAATATTACCGAAGAGATGTTAAGTTCCGACTCGGTGACCAGACAACTTAATGATCAGATATCCCTAGCTAAAGCTTTTGTTGTAATTGCAAAAGAAAGTAACAATCTCCAATTTGCTTGGGAACTAAGTGCTCAGATCCGCAATTCACAGATTCTTCTCTCAAATGCTGCCACTAGGCGTTCTCCTTTAACAACTAGAGAATCAGACAGTGCTATCCGAGATATGGCTTTATTGTTATACCAGGCTCAGCAGCTCCATTATGACAGTGCAACTATGATCATGAGATTCAAAGCAAAAATCCAAGCTCTTGAAGAACAGATGAATTCTGTAAGTGAAAAGAGTTCAAAATATGGACAAATAGCGGCTGAAGAAGTACCAAAAAGCTTATACTGTCTGGGTGTCCGGTTGACAACTGAATGGTTCAAAAACCTCAATTTGCAAAAGAAATTGAAGGACAAAAGGCAAGTGGAGATGAAGATTAAGGATAAAAACCTTTACCACTTTTGTGTGTTCTCTGATAACATCATTGCAACTTCAGTCGTGGTCAATTCAACTGCAAAAAATTCTAAAAATCCCAACATGGTTGTTTTTCACCTTGTCACTGATGAAATAAATTATGCTTCGATGAAGGCGTGGTTTGCCATGAATGACTTTCGTGGGGTGACTGTGGAAGTTCAGAAGTATGAAGACTTCTCATGGTTAAATGCTTCATATGTTCCTGTGCTTAAGCAACTTCAAGACTCAGAAATACAAAGCTACTACTTTTCCGGAAACAGTGATGGTGGAAAGACACCTATCAAGTTTCGTAACCCTAAATATCTGTCCATGCTTAACCACTTGAGGTTTTATATCCCTGAAGTTTTTCCTGCCCTGAAGAAGATCGTGTTCCTGGACGATGACGTCGTGGTTCAGAAGGATCTTTCTGATCTTTTTTCAATTGATTTGAATGGGAATGTTAATGGAGCTGTTGAGACATGCATGGAGACATTTCATAGATACCATAAATACTTGAACTATTCTCATCCTCTTATAAGAGCTCATTTTGATCCCGATGCATGCGGATGGGCATTTGGGATGAATGTTTTTGATTTGGTTGAATGGAGGAAAAAGAATGTAACTGGCATCTACCACTATTGGCAGGAAAAGAATGTAGATCGGACATTGTGGAAACTCGGCACTTTGCCACCTGGATTATTAACATTTTATGGACTAACAGAACCCTTGGATCCATCGTGGCATGTACTGGGTTTTGGCTACACAAACGTTGATCCTCAGTTGATAGAAAGAGGGGCAGTACTGCACTTCAATGGGAACTCCAAACCTTGGTTGAAGATTGGGATTGAAAAATACAAGCCCCTATGGGAAAAACATATTGATTACTCGCATACCTTATTGCAGCAATGCAACTTTCATTGA
Protein sequence

>MsG0280006854.01.T01

MRRRATDFRRPVRRRVPDALWWALCCAVVLLFIYILTRGTQIESRPPLSKRTYKNDRIMEGLNITEEMLSSDSVTRQLNDQISLAKAFVVIAKESNNLQFAWELSAQIRNSQILLSNAATRRSPLTTRESDSAIRDMALLLYQAQQLHYDSATMIMRFKAKIQALEEQMNSVSEKSSKYGQIAAEEVPKSLYCLGVRLTTEWFKNLNLQKKLKDKRQVEMKIKDKNLYHFCVFSDNIIATSVVVNSTAKNSKNPNMVVFHLVTDEINYASMKAWFAMNDFRGVTVEVQKYEDFSWLNASYVPVLKQLQDSEIQSYYFSGNSDGGKTPIKFRNPKYLSMLNHLRFYIPEVFPALKKIVFLDDDVVVQKDLSDLFSIDLNGNVNGAVETCMETFHRYHKYLNYSHPLIRAHFDPDACGWAFGMNVFDLVEWRKKNVTGIYHYWQEKNVDRTLWKLGTLPPGLLTFYGLTEPLDPSWHVLGFGYTNVDPQLIERGAVLHFNGNSKPWLKIGIEKYKPLWEKHIDYSHTLLQQCNFH*