AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280007020.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007020.01.T01 MTR_2g019210 77.045 440 22 4 3 363 10 449 0.0 635
MsG0280007020.01.T01 MTR_2g019210 86.799 303 11 2 3 276 10 312 0.0 530
MsG0280007020.01.T01 MTR_1g063090 79.298 285 30 2 3 258 10 294 1.41e-162 457
MsG0280007020.01.T01 MTR_1g031820 27.037 270 150 8 1 228 398 662 4.06e-16 80.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007020.01.T01 AT3G60500 50.472 424 130 6 1 347 8 428 5.38e-130 379
MsG0280007020.01.T01 AT3G60500 50.472 424 130 6 1 347 8 428 5.38e-130 379
MsG0280007020.01.T01 AT3G60500 50.472 424 130 6 1 347 8 428 5.38e-130 379
MsG0280007020.01.T01 AT3G60500 61.667 300 86 2 1 271 8 307 1.73e-125 365
MsG0280007020.01.T01 AT3G12990 60.678 295 87 2 1 266 8 302 1.08e-122 356
MsG0280007020.01.T01 AT3G12990 60.678 295 87 2 1 266 8 302 1.08e-122 356
MsG0280007020.01.T01 AT3G12990 61.733 277 77 2 1 248 8 284 3.34e-115 336
MsG0280007020.01.T01 AT3G12990 60.870 207 52 2 1 178 8 214 1.12e-80 246
MsG0280007020.01.T01 AT1G60080 25.185 270 153 7 10 233 26 292 5.52e-11 63.2

Find 90 sgRNAs with CRISPR-Local

Find 307 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGCAAGTTGAACATTAAATT+TGG 0.095631 2:+9516376 MsG0280007020.01.T01:CDS
CATAACTTAATTCCCATTAT+TGG 0.197437 2:-9520072 None:intergenic
TTCTTTCTGCCAAACTTGTC+TGG 0.208475 2:+9516646 MsG0280007020.01.T01:CDS
ATTTCCTGCGCTGGTTCTTC+TGG 0.247600 2:-9519939 None:intergenic
CTTCCAGTTGCAGTCACCTT+TGG 0.284591 2:+9517052 MsG0280007020.01.T01:CDS
GCATTATAGACCGCGGTTTA+CGG 0.311498 2:+9516589 MsG0280007020.01.T01:CDS
GTATATTTGTTTGTTCATTT+AGG 0.315602 2:+9520190 MsG0280007020.01.T01:three_prime_UTR
CATTATAGACCGCGGTTTAC+GGG 0.322767 2:+9516590 MsG0280007020.01.T01:CDS
AATCCAAAGGTGACTGCAAC+TGG 0.344185 2:-9517055 None:intergenic
TTCATTAGGCTATCTTTGTA+AGG 0.365793 2:-9516475 None:intergenic
GCAAGTTGAACATTAAATTT+GGG 0.368287 2:+9516377 MsG0280007020.01.T01:CDS
ATTAAATTTGGGAGGGATGA+TGG 0.374567 2:+9516388 MsG0280007020.01.T01:CDS
AGTGGATGGTCGGGGCCCCT+TGG 0.390912 2:+9516348 MsG0280007020.01.T01:CDS
TGTGGAACCACTGCCACGTT+AGG 0.394002 2:+9517849 MsG0280007020.01.T01:CDS
AGAAGGCCTGAATGCTCGTT+GGG 0.394350 2:+9516865 MsG0280007020.01.T01:CDS
ATAGATAGTGTACCTTCATT+AGG 0.408385 2:-9516489 None:intergenic
ACTCACTGCATCATTTATCT+TGG 0.411650 2:-9517379 None:intergenic
GCGAATGGCCCAGACAAGTT+TGG 0.413491 2:-9516655 None:intergenic
TCTTTCTGCCAAACTTGTCT+GGG 0.424579 2:+9516647 MsG0280007020.01.T01:CDS
CAGTCATTACAGCCTCTTCA+TGG 0.425419 2:-9517224 None:intergenic
TCTTAGAAAATGCGATAGAC+TGG 0.437829 2:+9520132 MsG0280007020.01.T01:three_prime_UTR
TGACACGTGTCTCGCCCAAT+TGG 0.455639 2:-9516423 None:intergenic
AGAGCTTCGAGTGGATGGTC+GGG 0.470323 2:+9516339 MsG0280007020.01.T01:CDS
ATCAACTCCTAGTAAACAAA+AGG 0.472420 2:+9519896 MsG0280007020.01.T01:CDS
TGGGTCTGCCGAGATCCAAT+TGG 0.473726 2:+9516408 MsG0280007020.01.T01:CDS
GTGGAACCACTGCCACGTTA+GGG 0.484142 2:+9517850 MsG0280007020.01.T01:CDS
CTAACTGCTGGCAGTAATGA+AGG 0.500124 2:+9519993 MsG0280007020.01.T01:CDS
TGCTGCAAATATTGCTGCAT+TGG 0.500659 2:+9516825 MsG0280007020.01.T01:CDS
CATGAAGAGGCTGTAATGAC+TGG 0.506831 2:+9517225 MsG0280007020.01.T01:CDS
GGGTCTGCCGAGATCCAATT+GGG 0.507284 2:+9516409 MsG0280007020.01.T01:CDS
TTAAATTTGGGAGGGATGAT+GGG 0.508701 2:+9516389 MsG0280007020.01.T01:CDS
GGAAGATGATGTATAATCAA+AGG 0.510424 2:-9517034 None:intergenic
ACTGTCTTGATTTCCTGCGC+TGG 0.511606 2:-9519948 None:intergenic
TTGAAAAGCACAACAATGAA+AGG 0.511669 2:+9517778 MsG0280007020.01.T01:CDS
GTGTGTGCAATTCAAAAGCC+TGG 0.513608 2:+9517282 MsG0280007020.01.T01:CDS
CAGAGCTTCGAGTGGATGGT+CGG 0.514274 2:+9516338 MsG0280007020.01.T01:CDS
GAAGATGATGTATAATCAAA+GGG 0.519406 2:-9517033 None:intergenic
ACGACATTCTTCCTCTGTTG+CGG 0.519551 2:+9517818 MsG0280007020.01.T01:CDS
CTATCAGAGCTTCGAGTGGA+TGG 0.523011 2:+9516334 MsG0280007020.01.T01:CDS
AAACTTGCTCATGTTAAAGC+TGG 0.525982 2:+9517345 MsG0280007020.01.T01:CDS
GCAGAGCGATTCAGTGTCAA+TGG 0.527593 2:-9516622 None:intergenic
TGAATTGACACAATCTGAGT+AGG 0.528375 2:-9518318 None:intergenic
ACTGCAACACTTAATGCAAA+TGG 0.537645 2:+9517255 MsG0280007020.01.T01:CDS
TTACAAAGATAGCCTAATGA+AGG 0.538333 2:+9516477 MsG0280007020.01.T01:CDS
ACATTCTTCCTCTGTTGCGG+TGG 0.540050 2:+9517821 MsG0280007020.01.T01:CDS
GTTCAACTTGCGATAGTCCA+AGG 0.542934 2:-9516365 None:intergenic
TGGAACCACTGCCACGTTAG+GGG 0.547405 2:+9517851 MsG0280007020.01.T01:CDS
ATTGACACTGCTCTAACTGC+TGG 0.548902 2:+9519981 MsG0280007020.01.T01:CDS
TAAACAAAAGGATTCAAGAC+AGG 0.550828 2:+9519908 MsG0280007020.01.T01:CDS
GAGCTTCGAGTGGATGGTCG+GGG 0.552607 2:+9516340 MsG0280007020.01.T01:CDS
CAGAAGGCCTGAATGCTCGT+TGG 0.553951 2:+9516864 MsG0280007020.01.T01:CDS
TTTCAGCAATGAAAATCTTG+TGG 0.555730 2:+9517078 MsG0280007020.01.T01:CDS
TCTGTTGCGGTGGATGTATG+TGG 0.557391 2:+9517831 MsG0280007020.01.T01:CDS
TGAAAAGCACAACAATGAAA+GGG 0.559466 2:+9517779 MsG0280007020.01.T01:CDS
GTTGAACATTAAATTTGGGA+GGG 0.560586 2:+9516381 MsG0280007020.01.T01:CDS
ACCCTGCATTGTCTAGTATG+TGG 0.565903 2:-9516686 None:intergenic
TGTGTGCAATTCAAAAGCCT+GGG 0.572264 2:+9517283 MsG0280007020.01.T01:CDS
CTGTCAAGCCCAAGAACAAG+AGG 0.572717 2:+9520033 MsG0280007020.01.T01:CDS
AGTTGAACATTAAATTTGGG+AGG 0.574931 2:+9516380 MsG0280007020.01.T01:CDS
TTCAACTTGCGATAGTCCAA+GGG 0.575404 2:-9516364 None:intergenic
CTTAGAAAATGCGATAGACT+GGG 0.580888 2:+9520133 MsG0280007020.01.T01:three_prime_UTR
TAAGCCAGAAGAACCAGCGC+AGG 0.581328 2:+9519935 MsG0280007020.01.T01:CDS
AAGGCCTGAATGCTCGTTGG+GGG 0.582507 2:+9516867 MsG0280007020.01.T01:CDS
GAATTGACACAATCTGAGTA+GGG 0.583687 2:-9518317 None:intergenic
CAGAGATTAGCTAATTGTTG+CGG 0.587847 2:+9516272 None:intergenic
GGGGAAACAAATCAATCAGA+TGG 0.590350 2:+9517871 MsG0280007020.01.T01:CDS
TGTCTCGCCCAATTGGATCT+CGG 0.592757 2:-9516416 None:intergenic
TGATGTATAATCAAAGGGAG+TGG 0.594545 2:-9517028 None:intergenic
GGAACCACTGCCACGTTAGG+GGG 0.597428 2:+9517852 MsG0280007020.01.T01:CDS
CTGAGGAAGCTGACCTCAGG+AGG 0.600233 2:-9516919 None:intergenic
TAATGAAGGTAAGACTCTGA+AGG 0.603765 2:+9520007 MsG0280007020.01.T01:CDS
GAAGGCCTGAATGCTCGTTG+GGG 0.609514 2:+9516866 MsG0280007020.01.T01:CDS
ATCCACATACTAGACAATGC+AGG 0.610994 2:+9516684 MsG0280007020.01.T01:CDS
CATCTCTGAAGACATTCAGA+AGG 0.617687 2:+9516848 MsG0280007020.01.T01:CDS
ACAGCCTCTTCATGGTATGT+CGG 0.618076 2:-9517216 None:intergenic
AGGCCTGAATGCTCGTTGGG+GGG 0.639267 2:+9516868 MsG0280007020.01.T01:CDS
TCCACATACTAGACAATGCA+GGG 0.639330 2:+9516685 MsG0280007020.01.T01:CDS
AGTTGTAGTGCATCCTCCTG+AGG 0.641826 2:+9516906 MsG0280007020.01.T01:CDS
AAAGCTTCTCTAGCTTCTCG+TGG 0.648947 2:+9518350 MsG0280007020.01.T01:CDS
GGATCCGACATACCATGAAG+AGG 0.653779 2:+9517212 MsG0280007020.01.T01:CDS
CTCTACTTTCCCGTAAACCG+CGG 0.664238 2:-9516599 None:intergenic
TCTTCTATCAGAGCTTCGAG+TGG 0.667601 2:+9516330 MsG0280007020.01.T01:CDS
TCTAAGATAAGATACATGGT+CGG 0.675153 2:-9520116 None:intergenic
TATGTGGATGTCAATGCGAA+TGG 0.686074 2:-9516670 None:intergenic
GTGCAATTCAAAAGCCTGGG+GGG 0.686221 2:+9517286 MsG0280007020.01.T01:CDS
ACATACATCCACCGCAACAG+AGG 0.701182 2:-9517829 None:intergenic
GTGTGCAATTCAAAAGCCTG+GGG 0.708877 2:+9517284 MsG0280007020.01.T01:CDS
TCAACTTGCGATAGTCCAAG+GGG 0.732414 2:-9516363 None:intergenic
TAGGAACGCATTATAGACCG+CGG 0.734765 2:+9516582 MsG0280007020.01.T01:intron
TGTGCAATTCAAAAGCCTGG+GGG 0.776295 2:+9517285 MsG0280007020.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAAATTTACAG+AGG + Chr2:9519389-9519408 MsG0280007020.01.T01:intron 10.0%
!! AAAAAAAAAAAATTTACAGA+GGG + Chr2:9519390-9519409 MsG0280007020.01.T01:intron 10.0%
!! TAAAAAATAATAATTTACAG+GGG - Chr2:9519228-9519247 None:intergenic 10.0%
!!! TTCATATATTTTATAATCAT+TGG + Chr2:9519768-9519787 MsG0280007020.01.T01:intron 10.0%
!!! TTGAAAATTTTCTTATAAAT+AGG - Chr2:9518937-9518956 None:intergenic 10.0%
!! AAAAAAAAAAATTTACAGAG+GGG + Chr2:9519391-9519410 MsG0280007020.01.T01:intron 15.0%
!! GTAATTTAACAAAACAATAA+GGG + Chr2:9518870-9518889 MsG0280007020.01.T01:intron 15.0%
!!! AAAACAAATTTTTTTTACAG+GGG - Chr2:9519256-9519275 None:intergenic 15.0%
!!! AAAATCTATTTTTTGACTAA+AGG + Chr2:9520219-9520238 MsG0280007020.01.T01:three_prime_UTR 15.0%
!!! CAAAACAAATTTTTTTTACA+GGG - Chr2:9519257-9519276 None:intergenic 15.0%
!!! TTTAGTCAAAAAATAGATTT+TGG - Chr2:9520220-9520239 None:intergenic 15.0%
!! AAAAAAACATCTTCCAATAA+TGG + Chr2:9520059-9520078 MsG0280007020.01.T01:CDS 20.0%
!! AAAAAACATCTTCCAATAAT+GGG + Chr2:9520060-9520079 MsG0280007020.01.T01:CDS 20.0%
!! ATAGGATAATAAATGAGTAA+AGG - Chr2:9518724-9518743 None:intergenic 20.0%
!! ATGCAACATTAATTATTGTT+TGG - Chr2:9519461-9519480 None:intergenic 20.0%
!! GGTAATTTAACAAAACAATA+AGG + Chr2:9518869-9518888 MsG0280007020.01.T01:intron 20.0%
!! GTATATTTGTTTGTTCATTT+AGG + Chr2:9520190-9520209 MsG0280007020.01.T01:three_prime_UTR 20.0%
!! TGCAACATTAATTATTGTTT+GGG - Chr2:9519460-9519479 None:intergenic 20.0%
!! TTTCTGCAAAAAAAAAAAGT+TGG + Chr2:9519311-9519330 MsG0280007020.01.T01:intron 20.0%
!!! AAACAAATTTTTTTTACAGG+GGG - Chr2:9519255-9519274 None:intergenic 20.0%
!!! AAAGCATGAAATTTTCATAA+CGG - Chr2:9517667-9517686 None:intergenic 20.0%
!!! AATCAAAAGTTATTAGTTCT+TGG - Chr2:9518058-9518077 None:intergenic 20.0%
!!! AATTTTCTTATAAATAGGAC+CGG - Chr2:9518932-9518951 None:intergenic 20.0%
!!! ATTACTTTTATCTGTCATTT+TGG + Chr2:9518229-9518248 MsG0280007020.01.T01:intron 20.0%
!!! ATTTTATCTAAACAAATGAG+AGG - Chr2:9518513-9518532 None:intergenic 20.0%
!!! ATTTTCTAAGATAAGATACA+TGG - Chr2:9520123-9520142 None:intergenic 20.0%
!!! CAAAACAATTTTTTTTACAG+GGG + Chr2:9519362-9519381 MsG0280007020.01.T01:intron 20.0%
!!! CCAAAACAAATTTTTTTTAC+AGG - Chr2:9519258-9519277 None:intergenic 20.0%
!!! CCAAAACAATTTTTTTTACA+GGG + Chr2:9519361-9519380 MsG0280007020.01.T01:intron 20.0%
!!! CCTGTAAAAAAAATTTGTTT+TGG + Chr2:9519255-9519274 MsG0280007020.01.T01:intron 20.0%
!!! TCCAAAACAATTTTTTTTAC+AGG + Chr2:9519360-9519379 MsG0280007020.01.T01:intron 20.0%
!!! TGATTTCAATTTTGGAATTT+TGG - Chr2:9518476-9518495 None:intergenic 20.0%
!!! TGGTTTCTTTTCTTATATAA+AGG + Chr2:9519166-9519185 MsG0280007020.01.T01:intron 20.0%
!!! TTTTGATTAAGCATTTAAAC+TGG + Chr2:9518419-9518438 MsG0280007020.01.T01:intron 20.0%
! AAAAGACCAACATTAAATGA+GGG - Chr2:9519035-9519054 None:intergenic 25.0%
! AACAAAACAATAAGGGTTAA+TGG + Chr2:9518877-9518896 MsG0280007020.01.T01:intron 25.0%
! ACTATAAATAACAGTCTTTG+AGG - Chr2:9518125-9518144 None:intergenic 25.0%
! AGTCTTAAATGACAACTAAA+AGG - Chr2:9518643-9518662 None:intergenic 25.0%
! CATAACTTAATTCCCATTAT+TGG - Chr2:9520075-9520094 None:intergenic 25.0%
! CTATAAATAACAGTCTTTGA+GGG - Chr2:9518124-9518143 None:intergenic 25.0%
! GAAGATGATGTATAATCAAA+GGG - Chr2:9517036-9517055 None:intergenic 25.0%
! GATAATATGATATGTATTGC+AGG + Chr2:9516997-9517016 MsG0280007020.01.T01:intron 25.0%
! GATTATGGAATGTATATTGT+TGG + Chr2:9517723-9517742 MsG0280007020.01.T01:intron 25.0%
! GTCTTAAATGACAACTAAAA+GGG - Chr2:9518642-9518661 None:intergenic 25.0%
! TCGTATATATACCAAAATCA+AGG - Chr2:9517151-9517170 None:intergenic 25.0%
!! AGACTGTTATTTATAGTCAA+TGG + Chr2:9518128-9518147 MsG0280007020.01.T01:intron 25.0%
!! ATTTTTGAATGACCTATTAG+GGG - Chr2:9519286-9519305 None:intergenic 25.0%
!! CATTTTTGAATGACCTATTA+GGG - Chr2:9519287-9519306 None:intergenic 25.0%
!! CCCTGTAAAAAAAATTGTTT+TGG - Chr2:9519364-9519383 None:intergenic 25.0%
!! GATTTGTTTATCTACAACTA+AGG + Chr2:9516758-9516777 MsG0280007020.01.T01:intron 25.0%
!! GCAAGTTGAACATTAAATTT+GGG + Chr2:9516377-9516396 MsG0280007020.01.T01:CDS 25.0%
!! TACTGCAATGATTTCAATTT+TGG - Chr2:9518484-9518503 None:intergenic 25.0%
!! TCTTTTCTTATATAAAGGAC+CGG + Chr2:9519171-9519190 MsG0280007020.01.T01:intron 25.0%
!! TTGATAATATGGAACCTATA+TGG + Chr2:9518152-9518171 MsG0280007020.01.T01:intron 25.0%
!! TTTTTATGCGTAAAGATTTG+AGG + Chr2:9517407-9517426 MsG0280007020.01.T01:intron 25.0%
!!! AATGTTGGTCTTTTCAATAT+TGG + Chr2:9519041-9519060 MsG0280007020.01.T01:intron 25.0%
!!! AATTTCTTTTGTTGTCTGAA+TGG + Chr2:9517748-9517767 MsG0280007020.01.T01:intron 25.0%
!!! ATACTTCACAAATTTTGATG+AGG + Chr2:9519079-9519098 MsG0280007020.01.T01:intron 25.0%
!!! CTAACTAAGGGTAATTTTTT+TGG + Chr2:9518762-9518781 MsG0280007020.01.T01:intron 25.0%
!!! TAAATGAGTAAAGGTACTAT+AGG - Chr2:9518715-9518734 None:intergenic 25.0%
!!! TACTTCACAAATTTTGATGA+GGG + Chr2:9519080-9519099 MsG0280007020.01.T01:intron 25.0%
!!! TAGTCAATGGATTGATAATA+TGG + Chr2:9518141-9518160 MsG0280007020.01.T01:intron 25.0%
!!! TCATTTTTGAATGACCTATT+AGG - Chr2:9519288-9519307 None:intergenic 25.0%
!!! TCTATTTTTTGACTAAAGGA+AGG + Chr2:9520223-9520242 MsG0280007020.01.T01:three_prime_UTR 25.0%
!!! TTGATTTTGGTATATATACG+AGG + Chr2:9517150-9517169 MsG0280007020.01.T01:intron 25.0%
AAATGACAACTAAAAGGGAA+CGG - Chr2:9518637-9518656 None:intergenic 30.0%
AACATAGACAAAACTCAGAA+TGG - Chr2:9518260-9518279 None:intergenic 30.0%
ACCTGATTCATTATTCTACA+AGG + Chr2:9519623-9519642 MsG0280007020.01.T01:intron 30.0%
AGATAAACAAATCAGCAAGT+TGG - Chr2:9516751-9516770 None:intergenic 30.0%
AGTTGAACATTAAATTTGGG+AGG + Chr2:9516380-9516399 MsG0280007020.01.T01:CDS 30.0%
ATAGATAGTGTACCTTCATT+AGG - Chr2:9516492-9516511 None:intergenic 30.0%
ATCAACTCCTAGTAAACAAA+AGG + Chr2:9519896-9519915 MsG0280007020.01.T01:CDS 30.0%
ATTCTCTCTGTAACTAACTA+AGG + Chr2:9518749-9518768 MsG0280007020.01.T01:intron 30.0%
ATTGCATTATCAATTGCGTA+TGG + Chr2:9517701-9517720 MsG0280007020.01.T01:intron 30.0%
CAAGATTATAGTGAAAGTGA+AGG - Chr2:9518386-9518405 None:intergenic 30.0%
CATATTATCGATAACTGATG+CGG - Chr2:9516986-9517005 None:intergenic 30.0%
CTTCACTTTCACTATAATCT+TGG + Chr2:9518384-9518403 MsG0280007020.01.T01:intron 30.0%
GAAAAGACCAACATTAAATG+AGG - Chr2:9519036-9519055 None:intergenic 30.0%
GAATGTCTTCTAAACAGAAT+GGG - Chr2:9518568-9518587 None:intergenic 30.0%
GACAATGCATAATATATGCA+AGG - Chr2:9518813-9518832 None:intergenic 30.0%
GATAAACAAATCAGCAAGTT+GGG - Chr2:9516750-9516769 None:intergenic 30.0%
GGAAGATGATGTATAATCAA+AGG - Chr2:9517037-9517056 None:intergenic 30.0%
GTTGAACATTAAATTTGGGA+GGG + Chr2:9516381-9516400 MsG0280007020.01.T01:CDS 30.0%
TAAACAAAAGGATTCAAGAC+AGG + Chr2:9519908-9519927 MsG0280007020.01.T01:CDS 30.0%
TAATAATTTACAGGGGAAAC+CGG - Chr2:9519221-9519240 None:intergenic 30.0%
TCCTTGTAGAATAATGAATC+AGG - Chr2:9519627-9519646 None:intergenic 30.0%
TGAATGTCTTCTAAACAGAA+TGG - Chr2:9518569-9518588 None:intergenic 30.0%
TGTACTATTGTAAAATGAGC+AGG + Chr2:9519870-9519889 MsG0280007020.01.T01:intron 30.0%
TGTGACTCTTTCTTCTAAAT+AGG - Chr2:9518973-9518992 None:intergenic 30.0%
TTACAAAGATAGCCTAATGA+AGG + Chr2:9516477-9516496 MsG0280007020.01.T01:CDS 30.0%
TTACAGAGAGAATGATGAAT+AGG - Chr2:9518742-9518761 None:intergenic 30.0%
TTCATTAGGCTATCTTTGTA+AGG - Chr2:9516478-9516497 None:intergenic 30.0%
TTCATTGCTGAAAAATCCAA+AGG - Chr2:9517071-9517090 None:intergenic 30.0%
TTCTAACCCTCATTTAATGT+TGG + Chr2:9519026-9519045 MsG0280007020.01.T01:intron 30.0%
TTCTCTCTGTAACTAACTAA+GGG + Chr2:9518750-9518769 MsG0280007020.01.T01:intron 30.0%
TTGAAATCATTGCAGTACTA+AGG + Chr2:9518487-9518506 MsG0280007020.01.T01:intron 30.0%
TTGACATGTTTATGCCATAT+AGG - Chr2:9518169-9518188 None:intergenic 30.0%
TTGGTATATATACGAGGTAA+TGG + Chr2:9517156-9517175 MsG0280007020.01.T01:intron 30.0%
TTTATGGCTGTGAAAAGTAA+TGG - Chr2:9519598-9519617 None:intergenic 30.0%
TTTCAGCAATGAAAATCTTG+TGG + Chr2:9517078-9517097 MsG0280007020.01.T01:CDS 30.0%
! CGCAAGTTGAACATTAAATT+TGG + Chr2:9516376-9516395 MsG0280007020.01.T01:CDS 30.0%
! GATTTTATATGATGCTCTCT+AGG + Chr2:9517185-9517204 MsG0280007020.01.T01:intron 30.0%
! GGTTTTTGAATGACCTATTA+GGG + Chr2:9519332-9519351 MsG0280007020.01.T01:intron 30.0%
! GTTTTTGAATGACCTATTAG+GGG + Chr2:9519333-9519352 MsG0280007020.01.T01:intron 30.0%
! TATCAATTGCGTATGGATTA+TGG + Chr2:9517708-9517727 MsG0280007020.01.T01:intron 30.0%
! TCTAAGATAAGATACATGGT+CGG - Chr2:9520119-9520138 None:intergenic 30.0%
! TCTAATACATGCCTTGATTT+TGG + Chr2:9517137-9517156 MsG0280007020.01.T01:intron 30.0%
! TGAAAAGCACAACAATGAAA+GGG + Chr2:9517779-9517798 MsG0280007020.01.T01:CDS 30.0%
! TGGAAGCTCAAAGATTTTAT+CGG + Chr2:9518001-9518020 MsG0280007020.01.T01:intron 30.0%
! TGGTTTTTGAATGACCTATT+AGG + Chr2:9519331-9519350 MsG0280007020.01.T01:intron 30.0%
! TTGAAAAGCACAACAATGAA+AGG + Chr2:9517778-9517797 MsG0280007020.01.T01:CDS 30.0%
! TTTTTCTTCCTCTTGTTCTT+GGG - Chr2:9520044-9520063 None:intergenic 30.0%
! TTTTTGAATGACCTATTAGG+GGG + Chr2:9519334-9519353 MsG0280007020.01.T01:intron 30.0%
! TTTTTGAATGACCTATTAGG+GGG - Chr2:9519353-9519334 None:intergenic 30.0%
!! ATGAATCAGGTTGAGATTTA+TGG - Chr2:9519614-9519633 None:intergenic 30.0%
!! CTTGAATCCTTTTGTTTACT+AGG - Chr2:9519906-9519925 None:intergenic 30.0%
!! TTGGTCTTTTCAATATTGGT+GGG + Chr2:9519045-9519064 MsG0280007020.01.T01:intron 30.0%
!!! ACTAAGGGTAATTTTTTTGG+TGG + Chr2:9518765-9518784 MsG0280007020.01.T01:intron 30.0%
!!! GTCTTGGTTTTGATGATTTT+TGG + Chr2:9519146-9519165 MsG0280007020.01.T01:intron 30.0%
!!! TTTTTTCTTCCTCTTGTTCT+TGG - Chr2:9520045-9520064 None:intergenic 30.0%
AAAATTTACAGAGGGGAAAC+CGG + Chr2:9519398-9519417 MsG0280007020.01.T01:intron 35.0%
ACTCACTGCATCATTTATCT+TGG - Chr2:9517382-9517401 None:intergenic 35.0%
ACTGCAACACTTAATGCAAA+TGG + Chr2:9517255-9517274 MsG0280007020.01.T01:CDS 35.0%
ACTTTCTTCTTTCACTTCTC+AGG + Chr2:9518291-9518310 MsG0280007020.01.T01:intron 35.0%
ATAATGCGTTCCTAACTCAA+CGG - Chr2:9516576-9516595 None:intergenic 35.0%
ATATGATGCTCTCTAGGTAT+TGG + Chr2:9517191-9517210 MsG0280007020.01.T01:intron 35.0%
ATTAAATTTGGGAGGGATGA+TGG + Chr2:9516388-9516407 MsG0280007020.01.T01:CDS 35.0%
ATTTCATTTCTGCGTTTGGT+TGG + Chr2:9519693-9519712 MsG0280007020.01.T01:intron 35.0%
CAATCAGATGGTGATAAAGA+AGG + Chr2:9517883-9517902 MsG0280007020.01.T01:intron 35.0%
CATAATATATGCAAGGTCCA+GGG - Chr2:9518806-9518825 None:intergenic 35.0%
CCTAACACCAAACACAAAAT+GGG - Chr2:9517487-9517506 None:intergenic 35.0%
CGGAAGCTAAATAGAAAACA+GGG - Chr2:9516966-9516985 None:intergenic 35.0%
CTTAGAAAATGCGATAGACT+GGG + Chr2:9520133-9520152 MsG0280007020.01.T01:three_prime_UTR 35.0%
CTTTCTTCTTTCACTTCTCA+GGG + Chr2:9518292-9518311 MsG0280007020.01.T01:intron 35.0%
GAAAGGCGAGACAAATTTAA+TGG + Chr2:9517930-9517949 MsG0280007020.01.T01:intron 35.0%
GAAATGACCTATATTACCGA+GGG + Chr2:9519420-9519439 MsG0280007020.01.T01:intron 35.0%
GAATTGACACAATCTGAGTA+GGG - Chr2:9518320-9518339 None:intergenic 35.0%
GACAACGAAAAAGGAACAAA+GGG + Chr2:9519543-9519562 MsG0280007020.01.T01:intron 35.0%
GCAACAACTAATGATTGTCT+TGG + Chr2:9519130-9519149 MsG0280007020.01.T01:intron 35.0%
GGAAGCTAAATAGAAAACAG+GGG - Chr2:9516965-9516984 None:intergenic 35.0%
TAATGAAGGTAAGACTCTGA+AGG + Chr2:9520007-9520026 MsG0280007020.01.T01:CDS 35.0%
TCGGTAATATAGGTCATTTC+CGG - Chr2:9519420-9519439 None:intergenic 35.0%
TCTTAGAAAATGCGATAGAC+TGG + Chr2:9520132-9520151 MsG0280007020.01.T01:three_prime_UTR 35.0%
TCTTCTGCTTATAAGTCTTC+TGG + Chr2:9517543-9517562 MsG0280007020.01.T01:intron 35.0%
TGAATTGACACAATCTGAGT+AGG - Chr2:9518321-9518340 None:intergenic 35.0%
TGATGTATAATCAAAGGGAG+TGG - Chr2:9517031-9517050 None:intergenic 35.0%
TTAAATTTGGGAGGGATGAT+GGG + Chr2:9516389-9516408 MsG0280007020.01.T01:CDS 35.0%
TTCAAATGCGACAACGAAAA+AGG + Chr2:9519534-9519553 MsG0280007020.01.T01:intron 35.0%
TTCTTATAAATAGGACCGGA+GGG - Chr2:9518928-9518947 None:intergenic 35.0%
TTCTTATATAAAGGACCGGA+GGG + Chr2:9519175-9519194 MsG0280007020.01.T01:intron 35.0%
TTTCTTATAAATAGGACCGG+AGG - Chr2:9518929-9518948 None:intergenic 35.0%
TTTCTTATATAAAGGACCGG+AGG + Chr2:9519174-9519193 MsG0280007020.01.T01:intron 35.0%
! AAACTTGCTCATGTTAAAGC+TGG + Chr2:9517345-9517364 MsG0280007020.01.T01:CDS 35.0%
! AAATGACATTTTGCGCTTTC+TGG - Chr2:9520269-9520288 None:intergenic 35.0%
! AAGCTCAAAGATTTTATCGG+TGG + Chr2:9518004-9518023 MsG0280007020.01.T01:intron 35.0%
! AATGACATTTTGCGCTTTCT+GGG - Chr2:9520268-9520287 None:intergenic 35.0%
! ATCATCTCCCATTTTGTGTT+TGG + Chr2:9517477-9517496 MsG0280007020.01.T01:intron 35.0%
! GTTGATTTCATTTCTGCGTT+TGG + Chr2:9519689-9519708 MsG0280007020.01.T01:intron 35.0%
! TGTGAGGTTTTCGTTTAGAT+AGG + Chr2:9519650-9519669 MsG0280007020.01.T01:intron 35.0%
! TTTGTTGTCTGAATGGATGT+AGG + Chr2:9517755-9517774 MsG0280007020.01.T01:intron 35.0%
!! TCTGAGTTTTGTCTATGTTG+AGG + Chr2:9518261-9518280 MsG0280007020.01.T01:intron 35.0%
!!! GAGGGAGTATTGTTTTACAT+GGG - Chr2:9518615-9518634 None:intergenic 35.0%
!!! GTAATTTTTTTGGTGGTGTC+CGG + Chr2:9518772-9518791 MsG0280007020.01.T01:intron 35.0%
!!! GTTGGTCTTTTCAATATTGG+TGG + Chr2:9519044-9519063 MsG0280007020.01.T01:intron 35.0%
!!! TAATTTTTTTGGTGGTGTCC+GGG + Chr2:9518773-9518792 MsG0280007020.01.T01:intron 35.0%
AAATAGAAAACAGGGGCGAA+AGG - Chr2:9516958-9516977 None:intergenic 40.0%
AAGCTCTTGGAGACAACTAA+GGG + Chr2:9518848-9518867 MsG0280007020.01.T01:intron 40.0%
AGATGCATCGTTCTGTTCAT+AGG - Chr2:9517450-9517469 None:intergenic 40.0%
ATCCACATACTAGACAATGC+AGG + Chr2:9516684-9516703 MsG0280007020.01.T01:CDS 40.0%
CACTCTATTTAGCTGCACTT+AGG + Chr2:9518443-9518462 MsG0280007020.01.T01:intron 40.0%
CGACAACGAAAAAGGAACAA+AGG + Chr2:9519542-9519561 MsG0280007020.01.T01:intron 40.0%
GAACAAAGGGAGTAATGTAG+AGG + Chr2:9519556-9519575 MsG0280007020.01.T01:intron 40.0%
GCATAATATATGCAAGGTCC+AGG - Chr2:9518807-9518826 None:intergenic 40.0%
GCCTAACACCAAACACAAAA+TGG - Chr2:9517488-9517507 None:intergenic 40.0%
GCGGAAGCTAAATAGAAAAC+AGG - Chr2:9516967-9516986 None:intergenic 40.0%
GGAAATGACCTATATTACCG+AGG + Chr2:9519419-9519438 MsG0280007020.01.T01:intron 40.0%
GGGGAAACAAATCAATCAGA+TGG + Chr2:9517871-9517890 MsG0280007020.01.T01:CDS 40.0%
GGTTAATAGTGCTTTACCCT+CGG - Chr2:9519439-9519458 None:intergenic 40.0%
GTATTAGAGAGAGAGAGAGA+GGG - Chr2:9517125-9517144 None:intergenic 40.0%
TAAGCTCTTGGAGACAACTA+AGG + Chr2:9518847-9518866 MsG0280007020.01.T01:intron 40.0%
TACCAACTGAGTTAAGCTCT+TGG + Chr2:9518835-9518854 MsG0280007020.01.T01:intron 40.0%
TATGTGGATGTCAATGCGAA+TGG - Chr2:9516673-9516692 None:intergenic 40.0%
TCCACATACTAGACAATGCA+GGG + Chr2:9516685-9516704 MsG0280007020.01.T01:CDS 40.0%
TCTTTCTGCCAAACTTGTCT+GGG + Chr2:9516647-9516666 MsG0280007020.01.T01:CDS 40.0%
TGCAATGAAAGGCAAACAGA+AGG - Chr2:9517604-9517623 None:intergenic 40.0%
TGCTGCAAATATTGCTGCAT+TGG + Chr2:9516825-9516844 MsG0280007020.01.T01:CDS 40.0%
TGCTTTACCCTCGGTAATAT+AGG - Chr2:9519430-9519449 None:intergenic 40.0%
TGTATTAGAGAGAGAGAGAG+AGG - Chr2:9517126-9517145 None:intergenic 40.0%
TGTCTTCTAAACAGAATGGG+TGG - Chr2:9518565-9518584 None:intergenic 40.0%
TGTGTGCAATTCAAAAGCCT+GGG + Chr2:9517283-9517302 MsG0280007020.01.T01:CDS 40.0%
TTCAACTTGCGATAGTCCAA+GGG - Chr2:9516367-9516386 None:intergenic 40.0%
TTCTTTCTGCCAAACTTGTC+TGG + Chr2:9516646-9516665 MsG0280007020.01.T01:CDS 40.0%
! ACCGGAGGGAGTATATTATA+GGG - Chr2:9518914-9518933 None:intergenic 40.0%
! AGAGCTTAACTCAGTTGGTA+AGG - Chr2:9518835-9518854 None:intergenic 40.0%
! CATCTCTGAAGACATTCAGA+AGG + Chr2:9516848-9516867 MsG0280007020.01.T01:CDS 40.0%
! TATTCTACAAGGAGTGTGTG+AGG + Chr2:9519634-9519653 MsG0280007020.01.T01:intron 40.0%
! TGTGATGATGCCACATCATT+AGG + Chr2:9517954-9517973 MsG0280007020.01.T01:intron 40.0%
!! CATAGGCATTGAAAGAGTGA+GGG - Chr2:9517433-9517452 None:intergenic 40.0%
!! GTAGGTCATTGACTCATTTC+CGG + Chr2:9519199-9519218 MsG0280007020.01.T01:intron 40.0%
!! TCATAGGCATTGAAAGAGTG+AGG - Chr2:9517434-9517453 None:intergenic 40.0%
!!! AATTTTTTTGGTGGTGTCCG+GGG + Chr2:9518774-9518793 MsG0280007020.01.T01:intron 40.0%
!!! CCCATTTTGTGTTTGGTGTT+AGG + Chr2:9517484-9517503 MsG0280007020.01.T01:intron 40.0%
!!! GGAGGGAGTATTGTTTTACA+TGG - Chr2:9518616-9518635 None:intergenic 40.0%
!!! GTTTTGGAATACCCCCTAAT+AGG + Chr2:9519271-9519290 MsG0280007020.01.T01:intron 40.0%
!!! GTTTTGGAATACCCCCTAAT+AGG - Chr2:9519290-9519271 None:intergenic 40.0%
AAGGTCACGCTGTTAAACTG+AGG - Chr2:9516939-9516958 None:intergenic 45.0%
AATCCAAAGGTGACTGCAAC+TGG - Chr2:9517058-9517077 None:intergenic 45.0%
ACAAGTGCAGAGTAGCAAGA+AGG + Chr2:9517977-9517996 MsG0280007020.01.T01:intron 45.0%
ACAGCCTCTTCATGGTATGT+CGG - Chr2:9517219-9517238 None:intergenic 45.0%
ACCCTGCATTGTCTAGTATG+TGG - Chr2:9516689-9516708 None:intergenic 45.0%
ACGACATTCTTCCTCTGTTG+CGG + Chr2:9517818-9517837 MsG0280007020.01.T01:CDS 45.0%
ATTGACACTGCTCTAACTGC+TGG + Chr2:9519981-9520000 MsG0280007020.01.T01:CDS 45.0%
CAGTCATTACAGCCTCTTCA+TGG - Chr2:9517227-9517246 None:intergenic 45.0%
CATGAAGAGGCTGTAATGAC+TGG + Chr2:9517225-9517244 MsG0280007020.01.T01:CDS 45.0%
CATTATAGACCGCGGTTTAC+GGG + Chr2:9516590-9516609 MsG0280007020.01.T01:CDS 45.0%
CCCCTATAATATACTCCCTC+CGG + Chr2:9518910-9518929 MsG0280007020.01.T01:intron 45.0%
CTAACTGCTGGCAGTAATGA+AGG + Chr2:9519993-9520012 MsG0280007020.01.T01:CDS 45.0%
CTAGACCAGTTGAAGCTGAA+AGG + Chr2:9517913-9517932 MsG0280007020.01.T01:intron 45.0%
CTCCAAGAGCTTAACTCAGT+TGG - Chr2:9518840-9518859 None:intergenic 45.0%
CTGCACTTGTCCTAATGATG+TGG - Chr2:9517967-9517986 None:intergenic 45.0%
CTTCACTGAATTCTCTCCCA+TGG + Chr2:9516512-9516531 MsG0280007020.01.T01:intron 45.0%
GACAACTAAAAGGGAACGGA+GGG - Chr2:9518633-9518652 None:intergenic 45.0%
GCACACTTCACTGCAATGAA+AGG - Chr2:9517615-9517634 None:intergenic 45.0%
GCATTATAGACCGCGGTTTA+CGG + Chr2:9516589-9516608 MsG0280007020.01.T01:CDS 45.0%
GTGTGCAATTCAAAAGCCTG+GGG + Chr2:9517284-9517303 MsG0280007020.01.T01:CDS 45.0%
GTGTGTGCAATTCAAAAGCC+TGG + Chr2:9517282-9517301 MsG0280007020.01.T01:CDS 45.0%
GTTCAACTTGCGATAGTCCA+AGG - Chr2:9516368-9516387 None:intergenic 45.0%
TAGGAACGCATTATAGACCG+CGG + Chr2:9516582-9516601 MsG0280007020.01.T01:intron 45.0%
TCAAAGGAAGGATCAGCCAT+GGG - Chr2:9516531-9516550 None:intergenic 45.0%
TCAACTTGCGATAGTCCAAG+GGG - Chr2:9516366-9516385 None:intergenic 45.0%
TCTTCTATCAGAGCTTCGAG+TGG + Chr2:9516330-9516349 MsG0280007020.01.T01:CDS 45.0%
TGACAACTAAAAGGGAACGG+AGG - Chr2:9518634-9518653 None:intergenic 45.0%
TGTGCAATTCAAAAGCCTGG+GGG + Chr2:9517285-9517304 MsG0280007020.01.T01:CDS 45.0%
! AAAGCTTCTCTAGCTTCTCG+TGG + Chr2:9518350-9518369 MsG0280007020.01.T01:CDS 45.0%
! CAGCAAGTTGGGTAAGAAAG+AGG - Chr2:9516739-9516758 None:intergenic 45.0%
! CCGGAGGGAGTATATTATAG+GGG - Chr2:9518913-9518932 None:intergenic 45.0%
! CGGAGGGAGTATATTATAGG+GGG - Chr2:9518912-9518931 None:intergenic 45.0%
! GACCGGAGGGAGTATATTAT+AGG - Chr2:9518915-9518934 None:intergenic 45.0%
! GAGGGAGTATATTATAGGGG+GGG - Chr2:9518910-9518929 None:intergenic 45.0%
! GGAGGGAGTATATTATAGGG+GGG - Chr2:9518911-9518930 None:intergenic 45.0%
!! TGATTTGTTTCCCCCTAACG+TGG - Chr2:9517865-9517884 None:intergenic 45.0%
!! AATAAAAAATAATAATTTAC+AGG - Chr2:9519230-9519249 None:intergenic 5.0%
!! ATAAAAAATAATAATTTACA+GGG - Chr2:9519229-9519248 None:intergenic 5.0%
!!! AAAATTTTCAAAAAATTTTT+TGG + Chr2:9518946-9518965 MsG0280007020.01.T01:intron 5.0%
AAACTGAGGAAGCTGACCTC+AGG - Chr2:9516925-9516944 None:intergenic 50.0%
ACATACATCCACCGCAACAG+AGG - Chr2:9517832-9517851 None:intergenic 50.0%
ACATTCTTCCTCTGTTGCGG+TGG + Chr2:9517821-9517840 MsG0280007020.01.T01:CDS 50.0%
ACTGACACCTTACCAGCTTG+AGG - Chr2:9518032-9518051 None:intergenic 50.0%
ACTGTCTTGATTTCCTGCGC+TGG - Chr2:9519951-9519970 None:intergenic 50.0%
AGAAGGCCTGAATGCTCGTT+GGG + Chr2:9516865-9516884 MsG0280007020.01.T01:CDS 50.0%
AGTCAATGACCTACTCCCTC+CGG - Chr2:9519193-9519212 None:intergenic 50.0%
AGTTGTAGTGCATCCTCCTG+AGG + Chr2:9516906-9516925 MsG0280007020.01.T01:CDS 50.0%
CTATCAGAGCTTCGAGTGGA+TGG + Chr2:9516334-9516353 MsG0280007020.01.T01:CDS 50.0%
CTCAAAGGAAGGATCAGCCA+TGG - Chr2:9516532-9516551 None:intergenic 50.0%
CTCTACTTTCCCGTAAACCG+CGG - Chr2:9516602-9516621 None:intergenic 50.0%
CTGACACCTTACCAGCTTGA+GGG - Chr2:9518031-9518050 None:intergenic 50.0%
CTGTCAAGCCCAAGAACAAG+AGG + Chr2:9520033-9520052 MsG0280007020.01.T01:CDS 50.0%
CTTCCAGTTGCAGTCACCTT+TGG + Chr2:9517052-9517071 MsG0280007020.01.T01:CDS 50.0%
GCAGAGCGATTCAGTGTCAA+TGG - Chr2:9516625-9516644 None:intergenic 50.0%
GGATCCGACATACCATGAAG+AGG + Chr2:9517212-9517231 MsG0280007020.01.T01:CDS 50.0%
GTGCAATTCAAAAGCCTGGG+GGG + Chr2:9517286-9517305 MsG0280007020.01.T01:CDS 50.0%
GTGCAGAGTAGCAAGAAGGA+TGG + Chr2:9517981-9518000 MsG0280007020.01.T01:intron 50.0%
TAACTCAACGGCAGTTCTCC+AGG - Chr2:9516564-9516583 None:intergenic 50.0%
TATAAAGGACCGGAGGGAGT+AGG + Chr2:9519181-9519200 MsG0280007020.01.T01:intron 50.0%
TCTCGCCTTTCAGCTTCAAC+TGG - Chr2:9517921-9517940 None:intergenic 50.0%
TCTGTTGCGGTGGATGTATG+TGG + Chr2:9517831-9517850 MsG0280007020.01.T01:CDS 50.0%
TGACACCTTACCAGCTTGAG+GGG - Chr2:9518030-9518049 None:intergenic 50.0%
TGGAGAACTGCCGTTGAGTT+AGG + Chr2:9516563-9516582 MsG0280007020.01.T01:intron 50.0%
TGTCTCGCCCAATTGGATCT+CGG - Chr2:9516419-9516438 None:intergenic 50.0%
!! ATTTCCTGCGCTGGTTCTTC+TGG - Chr2:9519942-9519961 None:intergenic 50.0%
AAGGCCTGAATGCTCGTTGG+GGG + Chr2:9516867-9516886 MsG0280007020.01.T01:CDS 55.0%
AATTCAAAAGCCTGGGGGGC+AGG + Chr2:9517290-9517309 MsG0280007020.01.T01:CDS 55.0%
AGAGAGAGAGAGAGAGGGAG+AGG - Chr2:9517120-9517139 None:intergenic 55.0%
AGAGCTTCGAGTGGATGGTC+GGG + Chr2:9516339-9516358 MsG0280007020.01.T01:CDS 55.0%
ATTCAAAAGCCTGGGGGGCA+GGG + Chr2:9517291-9517310 MsG0280007020.01.T01:CDS 55.0%
CAGAAGGCCTGAATGCTCGT+TGG + Chr2:9516864-9516883 MsG0280007020.01.T01:CDS 55.0%
CAGAGCTTCGAGTGGATGGT+CGG + Chr2:9516338-9516357 MsG0280007020.01.T01:CDS 55.0%
GAAGGCCTGAATGCTCGTTG+GGG + Chr2:9516866-9516885 MsG0280007020.01.T01:CDS 55.0%
GAGAGAGAGAGAGAGGGAGA+GGG - Chr2:9517119-9517138 None:intergenic 55.0%
GCGAATGGCCCAGACAAGTT+TGG - Chr2:9516658-9516677 None:intergenic 55.0%
GCTGATCCTTCCTTTGAGCC+TGG + Chr2:9516534-9516553 MsG0280007020.01.T01:intron 55.0%
GGGTCTGCCGAGATCCAATT+GGG + Chr2:9516409-9516428 MsG0280007020.01.T01:CDS 55.0%
GTGGAACCACTGCCACGTTA+GGG + Chr2:9517850-9517869 MsG0280007020.01.T01:CDS 55.0%
TAAGCCAGAAGAACCAGCGC+AGG + Chr2:9519935-9519954 MsG0280007020.01.T01:CDS 55.0%
TCAACGGCAGTTCTCCAGGA+CGG - Chr2:9516560-9516579 None:intergenic 55.0%
TGACACGTGTCTCGCCCAAT+TGG - Chr2:9516426-9516445 None:intergenic 55.0%
TGGAACCACTGCCACGTTAG+GGG + Chr2:9517851-9517870 MsG0280007020.01.T01:CDS 55.0%
TGGGTCTGCCGAGATCCAAT+TGG + Chr2:9516408-9516427 MsG0280007020.01.T01:CDS 55.0%
TGTGGAACCACTGCCACGTT+AGG + Chr2:9517849-9517868 MsG0280007020.01.T01:CDS 55.0%
AAGGTCCAGGGTTCGAACCC+CGG - Chr2:9518794-9518813 None:intergenic 60.0%
AGGCCTGAATGCTCGTTGGG+GGG + Chr2:9516868-9516887 MsG0280007020.01.T01:CDS 60.0%
CTGAGGAAGCTGACCTCAGG+AGG - Chr2:9516922-9516941 None:intergenic 60.0%
GAGCTTCGAGTGGATGGTCG+GGG + Chr2:9516340-9516359 MsG0280007020.01.T01:CDS 60.0%
GGAACCACTGCCACGTTAGG+GGG + Chr2:9517852-9517871 MsG0280007020.01.T01:CDS 60.0%
GTTTCCCCCTAACGTGGCAG+TGG - Chr2:9517859-9517878 None:intergenic 60.0%
TCTCCCCCCAACGAGCATTC+AGG - Chr2:9516874-9516893 None:intergenic 60.0%
TGAATGCTCGTTGGGGGGAG+AGG + Chr2:9516873-9516892 MsG0280007020.01.T01:CDS 60.0%
TTATCGGTGGCCCCTCAAGC+TGG + Chr2:9518017-9518036 MsG0280007020.01.T01:intron 60.0%
GGACGGCCAGGCTCAAAGGA+AGG - Chr2:9516543-9516562 None:intergenic 65.0%
GGTGGCCCCTCAAGCTGGTA+AGG + Chr2:9518022-9518041 MsG0280007020.01.T01:intron 65.0%
TCCAGGACGGCCAGGCTCAA+AGG - Chr2:9516547-9516566 None:intergenic 65.0%
TCCTTTGAGCCTGGCCGTCC+TGG + Chr2:9516543-9516562 MsG0280007020.01.T01:intron 65.0%
TGAAAGACACCCTGCCCCCC+AGG - Chr2:9517303-9517322 None:intergenic 65.0%
TGCTCGTTGGGGGGAGAGGA+TGG + Chr2:9516877-9516896 MsG0280007020.01.T01:CDS 65.0%
AGTGGATGGTCGGGGCCCCT+TGG + Chr2:9516348-9516367 MsG0280007020.01.T01:CDS 70.0%
GGCAGTTCTCCAGGACGGCC+AGG - Chr2:9516555-9516574 None:intergenic 70.0%
GGTGTCCGGGGTTCGAACCC+TGG + Chr2:9518786-9518805 MsG0280007020.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr2 gene 9516286 9520307 9516286 ID=MsG0280007020.01;Name=MsG0280007020.01
Chr2 mRNA 9516286 9520307 9516286 ID=MsG0280007020.01.T01;Parent=MsG0280007020.01;Name=MsG0280007020.01.T01;_AED=0.34;_eAED=0.34;_QI=0|0.71|0.62|1|1|1|8|219|363
Chr2 exon 9516286 9516498 9516286 ID=MsG0280007020.01.T01:exon:8323;Parent=MsG0280007020.01.T01
Chr2 exon 9516585 9516706 9516585 ID=MsG0280007020.01.T01:exon:8324;Parent=MsG0280007020.01.T01
Chr2 exon 9516813 9516927 9516813 ID=MsG0280007020.01.T01:exon:8325;Parent=MsG0280007020.01.T01
Chr2 exon 9517019 9517099 9517019 ID=MsG0280007020.01.T01:exon:8326;Parent=MsG0280007020.01.T01
Chr2 exon 9517207 9517395 9517207 ID=MsG0280007020.01.T01:exon:8327;Parent=MsG0280007020.01.T01
Chr2 exon 9517777 9517892 9517777 ID=MsG0280007020.01.T01:exon:8328;Parent=MsG0280007020.01.T01
Chr2 exon 9518313 9518371 9518313 ID=MsG0280007020.01.T01:exon:8329;Parent=MsG0280007020.01.T01
Chr2 exon 9519892 9520307 9519892 ID=MsG0280007020.01.T01:exon:8330;Parent=MsG0280007020.01.T01
Chr2 CDS 9516286 9516498 9516286 ID=MsG0280007020.01.T01:cds;Parent=MsG0280007020.01.T01
Chr2 CDS 9516585 9516706 9516585 ID=MsG0280007020.01.T01:cds;Parent=MsG0280007020.01.T01
Chr2 CDS 9516813 9516927 9516813 ID=MsG0280007020.01.T01:cds;Parent=MsG0280007020.01.T01
Chr2 CDS 9517019 9517099 9517019 ID=MsG0280007020.01.T01:cds;Parent=MsG0280007020.01.T01
Chr2 CDS 9517207 9517395 9517207 ID=MsG0280007020.01.T01:cds;Parent=MsG0280007020.01.T01
Chr2 CDS 9517777 9517892 9517777 ID=MsG0280007020.01.T01:cds;Parent=MsG0280007020.01.T01
Chr2 CDS 9518313 9518371 9518313 ID=MsG0280007020.01.T01:cds;Parent=MsG0280007020.01.T01
Chr2 CDS 9519892 9520088 9519892 ID=MsG0280007020.01.T01:cds;Parent=MsG0280007020.01.T01
Chr2 three_prime_UTR 9520089 9520307 9520089 ID=MsG0280007020.01.T01:three_prime_utr;Parent=MsG0280007020.01.T01
Gene Sequence

>MsG0280007020.01.T01

TTGTTGCGGTTTACAGTTAACGAAAAGAAATTCATTGAAACTGCTCTTCTATCAGAGCTTCGAGTGGATGGTCGGGGCCCCTTGGACTATCGCAAGTTGAACATTAAATTTGGGAGGGATGATGGGTCTGCCGAGATCCAATTGGGCGAGACACGTGTCATGAGTTTTGTGACTGCTCAACTTGTGCAGCCTTACAAAGATAGCCTAATGAAGGAACGCATTATAGACCGCGGTTTACGGGAAAGTAGAGCCATTGACACTGAATCGCTCTGCATTCTTTCTGCCAAACTTGTCTGGGCCATTCGCATTGACATCCACATACTAGACAATGCAGGAAATCTTGTTGATGCTGCAAATATTGCTGCATTGGCATCTCTGAAGACATTCAGAAGGCCTGAATGCTCGTTGGGGGGAGAGGATGGTCAACAAGTTGTAGTGCATCCTCCTGAGGTGCGCGAGCCACTCCCTTTGATTATACATCATCTTCCAGTTGCAGTCACCTTTGGATTTTTCAGCAATGAAAATCTTGTGGTATTGGATCCGACATACCATGAAGAGGCTGTAATGACTGGACGCATGACTGCAACACTTAATGCAAATGGTGATGTGTGTGCAATTCAAAAGCCTGGGGGGCAGGGTGTCTTTCAACGAGTTATCATGCATTGCTTGAAACTTGCTCATGTTAAAGCTGGTGATATTACAGCCAAGATAAATGATGCAGTTGAAAAGCACAACAATGAAAGGGCACTACAGAAGATTAAACGACATTCTTCCTCTGTTGCGGTGGATGTATGTGGAACCACTGCCACGTTAGGGGGAAACAAATCAATCAGATGGGATCCCTACTCAGATTGTGTCAATTCAGATCTTCTAAAAGCTTCTCTAGCTTCTCGTGGACAATCAACTCCTAGTAAACAAAAGGATTCAAGACAGGAGACTAAGCCAGAAGAACCAGCGCAGGAAATCAAGACAGTTTTCTGCACAATTGACACTGCTCTAACTGCTGGCAGTAATGAAGGTAAGACTCTGAAGGATGCTGTCAAGCCCAAGAACAAGAGGAAGAAAAAAACATCTTCCAATAATGGGAATTAA
Protein sequence

>MsG0280007020.01.T01

LLRFTVNEKKFIETALLSELRVDGRGPLDYRKLNIKFGRDDGSAEIQLGETRVMSFVTAQLVQPYKDSLMKERIIDRGLRESRAIDTESLCILSAKLVWAIRIDIHILDNAGNLVDAANIAALASLKTFRRPECSLGGEDGQQVVVHPPEVREPLPLIIHHLPVAVTFGFFSNENLVVLDPTYHEEAVMTGRMTATLNANGDVCAIQKPGGQGVFQRVIMHCLKLAHVKAGDITAKINDAVEKHNNERALQKIKRHSSSVAVDVCGTTATLGGNKSIRWDPYSDCVNSDLLKASLASRGQSTPSKQKDSRQETKPEEPAQEIKTVFCTIDTALTAGSNEGKTLKDAVKPKNKRKKKTSSNNGN*