AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280007202.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007202.01.T01 MTR_2g022520 80.184 217 37 1 127 343 26 236 1.17e-121 350
MsG0280007202.01.T01 MTR_2g022520 97.101 69 2 0 1 69 1 69 2.52e-39 139
MsG0280007202.01.T01 MTR_4g117050 83.616 177 29 0 167 343 61 237 3.05e-107 313
MsG0280007202.01.T01 MTR_4g117050 69.565 69 20 1 1 68 1 69 6.34e-23 95.9
MsG0280007202.01.T01 MTR_4g117050 86.982 169 22 0 175 343 24 192 3.65e-106 309
MsG0280007202.01.T01 MTR_1g041380 48.889 180 89 2 165 342 57 235 1.36e-58 189
MsG0280007202.01.T01 MTR_1g102680 45.503 189 100 2 156 342 48 235 2.41e-57 186
MsG0280007202.01.T01 MTR_1g041380 52.273 132 63 0 165 296 57 188 4.73e-47 158
MsG0280007202.01.T01 MTR_2g013140 43.646 181 99 2 156 334 50 229 1.06e-46 159
MsG0280007202.01.T01 MTR_4g088955 47.500 160 81 2 177 334 135 293 8.44e-46 159
MsG0280007202.01.T01 MTR_2g079670 47.561 164 83 2 173 334 19 181 8.82e-43 147
MsG0280007202.01.T01 MTR_2g079670 48.750 160 79 2 177 334 72 230 3.61e-42 147
MsG0280007202.01.T01 MTR_2g013140 46.809 141 75 0 156 296 50 190 3.28e-40 140
MsG0280007202.01.T01 MTR_2g079670 51.667 120 58 0 177 296 72 191 1.03e-32 121
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007202.01.T01 AT5G19140 85.207 169 25 0 172 340 29 197 2.70e-105 307
MsG0280007202.01.T01 AT5G19140 83.333 174 29 0 167 340 60 233 3.66e-105 308
MsG0280007202.01.T01 AT5G19140 71.014 69 20 0 1 69 1 69 5.66e-27 107
MsG0280007202.01.T01 AT5G19140 76.437 174 29 1 167 340 60 221 2.10e-92 275
MsG0280007202.01.T01 AT5G19140 71.014 69 20 0 1 69 1 69 3.67e-27 107
MsG0280007202.01.T01 AT5G43830 47.674 172 87 2 165 334 58 228 1.01e-54 180
MsG0280007202.01.T01 AT3G22850 45.652 184 97 2 156 337 48 230 1.30e-54 179
MsG0280007202.01.T01 AT4G27450 51.282 156 73 2 181 334 77 231 4.37e-50 168
MsG0280007202.01.T01 AT3G15450 44.970 169 89 3 169 334 63 230 1.58e-45 156
MsG0280007202.01.T01 AT3G15450 46.043 139 74 1 159 296 53 191 4.88e-37 132
MsG0280007202.01.T01 AT3G15450 46.552 116 61 1 159 273 53 168 5.05e-29 110

Find 109 sgRNAs with CRISPR-Local

Find 373 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATGATGCTGATTTGCTTAA+AGG 0.139816 2:+11901629 MsG0280007202.01.T01:CDS
TATCCTTATTCCATCCTTCT+TGG 0.210701 2:-11900232 None:intergenic
CTGGAAAGGTTCCTCTATAT+TGG 0.254858 2:+11901573 MsG0280007202.01.T01:CDS
CTGCTAATGAGGAGGAAATT+TGG 0.258669 2:+11902534 MsG0280007202.01.T01:CDS
GAAATTTCACATCTACTATT+TGG 0.263156 2:-11900071 None:intergenic
CAGCTGTGTCACTGCAGGTT+GGG 0.279911 2:+11896552 MsG0280007202.01.T01:CDS
GAGTAAACCTATTTACATTA+TGG 0.292540 2:-11902793 None:intergenic
TGCTAATGAGGAGGAAATTT+GGG 0.296941 2:+11902535 MsG0280007202.01.T01:CDS
ACTGCAGTAATCTTATTCTT+TGG 0.306160 2:-11902509 None:intergenic
TCATATGATGGATGCATTAA+TGG 0.311458 2:+11902724 MsG0280007202.01.T01:three_prime_UTR
TGGAAAGGTTCCTCTATATT+GGG 0.314487 2:+11901574 MsG0280007202.01.T01:CDS
AAATTTCCTTATCAAATGTT+AGG 0.324524 2:+11900018 MsG0280007202.01.T01:CDS
CGGCGAATTTGCTGCTGAAA+AGG 0.343100 2:+11896510 MsG0280007202.01.T01:CDS
ATCCTTATTCCATCCTTCTT+GGG 0.343489 2:-11900231 None:intergenic
ACGTCTTCGGCGACGGTGTT+CGG 0.365937 2:-11896487 None:intergenic
AATTTCGTGGTCACTTCAAA+TGG 0.384093 2:+11900088 MsG0280007202.01.T01:CDS
CCATCATATGATACTCCATT+TGG 0.389370 2:-11902712 None:intergenic
GAAGGGACCATAATGTAAAT+AGG 0.389382 2:+11902786 MsG0280007202.01.T01:three_prime_UTR
GGTGTCTCCTCCGGAGGAGC+TGG 0.391500 2:+11896451 MsG0280007202.01.T01:CDS
CTAAATTATTCGTTGAAAGA+TGG 0.393144 2:-11903019 None:intergenic
GGCCCAAGAAGGATGGAATA+AGG 0.400493 2:+11900229 MsG0280007202.01.T01:CDS
AGCAAATTCGCCGACGTCTT+CGG 0.404314 2:-11896500 None:intergenic
GGATGCATTAATGGAGTAAT+GGG 0.406465 2:+11902733 MsG0280007202.01.T01:three_prime_UTR
CCGGAGGAGCTGGTGGCTGC+TGG 0.409045 2:+11896461 MsG0280007202.01.T01:CDS
CCAGCAGCCACCAGCTCCTC+CGG 0.411220 2:-11896461 None:intergenic
TACTCATAATTGTGGAGAAT+GGG 0.413766 2:+11902811 MsG0280007202.01.T01:three_prime_UTR
GGAAGCTTGAGACAGCAATA+TGG 0.415780 2:+11901294 MsG0280007202.01.T01:CDS
CATGTTGTTGGTCATCTTAG+TGG 0.419413 2:+11901399 MsG0280007202.01.T01:CDS
TCAGCTGTGTCACTGCAGGT+TGG 0.420834 2:+11896551 MsG0280007202.01.T01:CDS
GATAATGTGGAGTAGGTTGT+TGG 0.421479 2:+11900257 MsG0280007202.01.T01:CDS
GAGATATTCTGCTTGTTTGA+AGG 0.432657 2:+11901255 MsG0280007202.01.T01:CDS
TATTACATTCGAAATGCAAC+TGG 0.435758 2:-11902914 None:intergenic
ATTGCAATTATTAGCCACTT+TGG 0.448822 2:+11900119 MsG0280007202.01.T01:CDS
GGCTTCAGCTGTGTCACTGC+AGG 0.449893 2:+11896547 MsG0280007202.01.T01:CDS
AATTTGGGGTGCAACTTTCA+AGG 0.452853 2:+11902550 MsG0280007202.01.T01:CDS
AGCTGTGTCACTGCAGGTTG+GGG 0.453837 2:+11896553 MsG0280007202.01.T01:CDS
TACCCTGCTAATCATGTTGT+TGG 0.455247 2:+11901387 MsG0280007202.01.T01:CDS
ATTTCGTGGTCACTTCAAAT+GGG 0.455699 2:+11900089 MsG0280007202.01.T01:CDS
GGTTGGGGAGGATGTGCAGT+TGG 0.462373 2:+11896568 MsG0280007202.01.T01:CDS
ATAGAGGAACCTTTCCAGAT+TGG 0.466519 2:-11901568 None:intergenic
AATTACTAAACTCACCTTGA+GGG 0.470171 2:-11901679 None:intergenic
CAAATTTCCTCCTCATTAGC+AGG 0.476725 2:-11902533 None:intergenic
CAAAGAAAAGAGAGGTTTGT+GGG 0.478313 2:-11900188 None:intergenic
TACTGCAGTGCCTGCTAATG+AGG 0.480593 2:+11902523 MsG0280007202.01.T01:CDS
TTACTCATAATTGTGGAGAA+TGG 0.485261 2:+11902810 MsG0280007202.01.T01:three_prime_UTR
TGACCAACAACATGATTAGC+AGG 0.488097 2:-11901390 None:intergenic
CCCTAGTGTTTAACAGAGGA+TGG 0.490333 2:-11896350 None:intergenic
ATAGTAGATGTGAAATTTCG+TGG 0.490452 2:+11900075 MsG0280007202.01.T01:CDS
AGCGACAAAGAGTGTGGAAG+TGG 0.491542 2:-11901451 None:intergenic
TTTGCTGCTGAAAAGGTTTG+TGG 0.496279 2:+11896517 MsG0280007202.01.T01:CDS
TCTGTGGCTGCAAGAACTGC+TGG 0.497107 2:-11902677 None:intergenic
AGAGTAGATATCTTTCCAAA+TGG 0.504047 2:+11902697 MsG0280007202.01.T01:exon
GTCTCCTCCGGAGGAGCTGG+TGG 0.505758 2:+11896454 MsG0280007202.01.T01:CDS
AGAAGGATGGAATAAGGATA+AGG 0.507520 2:+11900235 MsG0280007202.01.T01:CDS
GAAGGATCTCTAGACAATCT+AGG 0.508330 2:+11901273 MsG0280007202.01.T01:CDS
AAAATTTACCTTGGTTGCCA+AGG 0.511220 2:-11896614 None:intergenic
TAGCTCAGTGGTGTCTCCTC+CGG 0.513586 2:+11896442 MsG0280007202.01.T01:CDS
AATAGGTTTACTCATAATTG+TGG 0.518436 2:+11902803 MsG0280007202.01.T01:three_prime_UTR
TGACTATAAGACATGTATGA+AGG 0.522758 2:+11902768 MsG0280007202.01.T01:three_prime_UTR
AACAGAGGATGGAATGGGAT+GGG 0.525813 2:-11896339 None:intergenic
TTCTACTCAACAGCAGTTGG+AGG 0.526910 2:+11902467 MsG0280007202.01.T01:CDS
TGTTTCTACTCAACAGCAGT+TGG 0.527144 2:+11902464 MsG0280007202.01.T01:CDS
GAAAAGGTTTGTGGAGAGGA+AGG 0.528744 2:+11896526 MsG0280007202.01.T01:CDS
TGTTTAACAGAGGATGGAAT+GGG 0.528871 2:-11896344 None:intergenic
TCACTTGCTTCTTTCCCTCA+AGG 0.530143 2:+11901665 MsG0280007202.01.T01:CDS
TTCTTATGGCCCAAGAAGGA+TGG 0.530312 2:+11900222 MsG0280007202.01.T01:CDS
GTGTTTAACAGAGGATGGAA+TGG 0.535404 2:-11896345 None:intergenic
ATGTTAGGACAAAATTATCC+TGG 0.536507 2:+11900033 MsG0280007202.01.T01:CDS
TATTGGGGAATAACTGCTGA+TGG 0.537056 2:+11901590 MsG0280007202.01.T01:CDS
GGATAAGGATAATGTGGAGT+AGG 0.537145 2:+11900250 MsG0280007202.01.T01:CDS
CCAAATGGAGTATCATATGA+TGG 0.537769 2:+11902712 MsG0280007202.01.T01:three_prime_UTR
TTCGCCGACGTCTTCGGCGA+CGG 0.538831 2:-11896494 None:intergenic
GCAGTTATTCCCCAATATAG+AGG 0.541559 2:-11901584 None:intergenic
TGGTCAAAGAAAGTTGAGCC+AGG 0.542841 2:-11900051 None:intergenic
ATAATGTGGAGTAGGTTGTT+GGG 0.546135 2:+11900258 MsG0280007202.01.T01:CDS
GAATAAGGATAAGGATAATG+TGG 0.547142 2:+11900244 MsG0280007202.01.T01:CDS
GTTGCCAAGGTGACTCCTCA+TGG 0.551115 2:-11896601 None:intergenic
TGTTAGGTCATTCGCTGTGA+AGG 0.555236 2:+11901230 MsG0280007202.01.T01:intron
TCCATCCTCTGTTAAACACT+AGG 0.555617 2:+11896349 MsG0280007202.01.T01:five_prime_UTR
TTGATAGGACCAATCTGGAA+AGG 0.557100 2:+11901559 MsG0280007202.01.T01:intron
TGGATGCATTAATGGAGTAA+TGG 0.560531 2:+11902732 MsG0280007202.01.T01:three_prime_UTR
TAACAGAGGATGGAATGGGA+TGG 0.562730 2:-11896340 None:intergenic
ATGATGAATTAACAGGTGGA+AGG 0.564009 2:+11902653 MsG0280007202.01.T01:intron
TGATGAATTAACAGGTGGAA+GGG 0.565942 2:+11902654 MsG0280007202.01.T01:intron
CCAAAGAAAAGAGAGGTTTG+TGG 0.569881 2:-11900189 None:intergenic
ACAACATGATTAGCAGGGTA+AGG 0.573620 2:-11901384 None:intergenic
GATTTGCTTAAAGGTGCTTG+TGG 0.579022 2:+11901638 MsG0280007202.01.T01:CDS
CTCAGTGGTGTCTCCTCCGG+AGG 0.585477 2:+11896445 MsG0280007202.01.T01:CDS
CACACCATGAGGAGTCACCT+TGG 0.585888 2:+11896597 MsG0280007202.01.T01:CDS
CCATCCTCTGTTAAACACTA+GGG 0.589201 2:+11896350 MsG0280007202.01.T01:five_prime_UTR
TGTGTCACTGCAGGTTGGGG+AGG 0.595317 2:+11896556 MsG0280007202.01.T01:CDS
TCTACTCAACAGCAGTTGGA+GGG 0.599031 2:+11902468 MsG0280007202.01.T01:CDS
AGGAGTCACCTTGGCAACCA+AGG 0.601615 2:+11896606 MsG0280007202.01.T01:CDS
GACTATAAGACATGTATGAA+GGG 0.605400 2:+11902769 MsG0280007202.01.T01:three_prime_UTR
CAAATCAGCATCATCAGCAA+AGG 0.606251 2:-11901621 None:intergenic
GGAAAGGTTCCTCTATATTG+GGG 0.613894 2:+11901575 MsG0280007202.01.T01:CDS
GCAGCCACCAGCTCCTCCGG+AGG 0.614698 2:-11896458 None:intergenic
TGCAGTGCCTGCTAATGAGG+AGG 0.621425 2:+11902526 MsG0280007202.01.T01:CDS
TACGGAAGCGACAAAGAGTG+TGG 0.626189 2:-11901457 None:intergenic
TGGACAGTGCACAGCCAAAG+TGG 0.626296 2:-11900133 None:intergenic
TTTCGTGGTCACTTCAAATG+GGG 0.640732 2:+11900090 MsG0280007202.01.T01:CDS
TGCTGAAAAGGTTTGTGGAG+AGG 0.654631 2:+11896522 MsG0280007202.01.T01:CDS
GGGGATATTCAGTAGCTCAG+TGG 0.666441 2:+11896430 MsG0280007202.01.T01:CDS
GACCAACAACATGATTAGCA+GGG 0.670833 2:-11901389 None:intergenic
GCTAATGAGGAGGAAATTTG+GGG 0.677443 2:+11902536 MsG0280007202.01.T01:CDS
AACACCGTCGCCGAAGACGT+CGG 0.682410 2:+11896490 MsG0280007202.01.T01:CDS
TTGGAAAGATATCTACTCTG+TGG 0.685063 2:-11902693 None:intergenic
TAGTCCCTAGTGTTTAACAG+AGG 0.705843 2:-11896354 None:intergenic
GTTGGCTTATACACACCATG+AGG 0.770040 2:+11896586 MsG0280007202.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATATAAGAAAAATAGT+AGG - Chr2:11899207-11899226 None:intergenic 10.0%
!! GATATTTAATCATAATATAT+AGG - Chr2:11898928-11898947 None:intergenic 10.0%
!! GGTAAAAAAATAAATTAAAA+GGG - Chr2:11901515-11901534 None:intergenic 10.0%
!! TAAAATAAAGATAATAGAAA+GGG + Chr2:11900415-11900434 MsG0280007202.01.T01:intron 10.0%
!! TGGTAAAAAAATAAATTAAA+AGG - Chr2:11901516-11901535 None:intergenic 10.0%
!!! AATATTTTATTATGAAATTG+TGG + Chr2:11898358-11898377 MsG0280007202.01.T01:intron 10.0%
!!! CTATTTAAAACAAAATTTAT+AGG - Chr2:11898950-11898969 None:intergenic 10.0%
!! AATATGACATATTTATAAGT+AGG + Chr2:11902320-11902339 MsG0280007202.01.T01:intron 15.0%
!! ATATGACATATTTATAAGTA+GGG + Chr2:11902321-11902340 MsG0280007202.01.T01:intron 15.0%
!! ATTTACTATTTATAAGATGT+TGG - Chr2:11902303-11902322 None:intergenic 15.0%
!! GTAAAATAAAGATAATAGAA+AGG + Chr2:11900414-11900433 MsG0280007202.01.T01:intron 15.0%
!!! AATAAAACTTGTTGAAATTT+GGG - Chr2:11898235-11898254 None:intergenic 15.0%
!!! GATTTTTCGTAAAAAAAAAA+TGG - Chr2:11898586-11898605 None:intergenic 15.0%
!!! TGGTTTTTTTTTTTTTAAGA+AGG + Chr2:11897331-11897350 MsG0280007202.01.T01:intron 15.0%
!!! TGTAATTTTTACCAAAATAA+CGG - Chr2:11900610-11900629 None:intergenic 15.0%
!!! TTAGTGGTAAATTTTTTAAA+GGG + Chr2:11901045-11901064 MsG0280007202.01.T01:intron 15.0%
!!! TTGGAATTTTTTTTTTCTTA+TGG + Chr2:11900208-11900227 MsG0280007202.01.T01:CDS 15.0%
!!! TTGTTTGTATTATTTTTGAT+AGG + Chr2:11901544-11901563 MsG0280007202.01.T01:intron 15.0%
!!! TTTAAAAAGTTCAATTTTCT+AGG - Chr2:11901748-11901767 None:intergenic 15.0%
!!! TTTAGTGGTAAATTTTTTAA+AGG + Chr2:11901044-11901063 MsG0280007202.01.T01:intron 15.0%
!!! TTTTAAAGACAAAATTTTAG+TGG + Chr2:11901029-11901048 MsG0280007202.01.T01:intron 15.0%
!! AAATTAGAGTTAAAAAGCTA+TGG + Chr2:11899465-11899484 MsG0280007202.01.T01:intron 20.0%
!! AAATTTCCTTATCAAATGTT+AGG + Chr2:11900018-11900037 MsG0280007202.01.T01:CDS 20.0%
!! AAGAATTTATCAAAAAAAGC+TGG - Chr2:11898822-11898841 None:intergenic 20.0%
!! AAGTGATGATTTATTGTTTA+AGG - Chr2:11899936-11899955 None:intergenic 20.0%
!! AATAAAATATAAGAAGTGGT+CGG - Chr2:11897131-11897150 None:intergenic 20.0%
!! AATAAAATATAAGAAGTGGT+TGG - Chr2:11897131-11897150 None:intergenic 20.0%
!! AATTTGGTTAAAATTGAGTT+TGG - Chr2:11901938-11901957 None:intergenic 20.0%
!! ACAGAGTTATAAATAACTTA+CGG - Chr2:11901478-11901497 None:intergenic 20.0%
!! ATAATAAAAATATATGCGTC+TGG + Chr2:11902934-11902953 MsG0280007202.01.T01:three_prime_UTR 20.0%
!! ATCATTATCAAAACCTAATT+CGG - Chr2:11899172-11899191 None:intergenic 20.0%
!! ATTAAAAGGGACTTATAATA+AGG - Chr2:11901502-11901521 None:intergenic 20.0%
!! ATTGATAAAAATATCCTGTA+AGG + Chr2:11899321-11899340 MsG0280007202.01.T01:intron 20.0%
!! CAATAATGAGAGAATAAATT+AGG - Chr2:11902416-11902435 None:intergenic 20.0%
!! GACTTCAAATGAATTTAATT+TGG - Chr2:11901954-11901973 None:intergenic 20.0%
!! GATATTTATGATGAATTAAC+AGG + Chr2:11902646-11902665 MsG0280007202.01.T01:intron 20.0%
!! GCAATTGTTTAAAAAGAAAA+GGG - Chr2:11899749-11899768 None:intergenic 20.0%
!! GTAATAGAAATAGTGTTTAT+TGG + Chr2:11898025-11898044 MsG0280007202.01.T01:intron 20.0%
!! TAAAAATTACACTTTGCAAT+AGG + Chr2:11900619-11900638 MsG0280007202.01.T01:intron 20.0%
!! TAAACTAAACAAGAAAAGAT+AGG - Chr2:11899444-11899463 None:intergenic 20.0%
!! TATATTACACACACTTAAAT+TGG + Chr2:11900720-11900739 MsG0280007202.01.T01:intron 20.0%
!! TATGACATATTTATAAGTAG+GGG + Chr2:11902322-11902341 MsG0280007202.01.T01:intron 20.0%
!! TATTCAATAAATGATGTATG+TGG - Chr2:11897002-11897021 None:intergenic 20.0%
!! TCAATTTAATTAACCAAACA+AGG + Chr2:11898993-11899012 MsG0280007202.01.T01:intron 20.0%
!! TTAAAAGGGACTTATAATAA+GGG - Chr2:11901501-11901520 None:intergenic 20.0%
!! TTAACTAGATTAAACTATGT+TGG - Chr2:11898528-11898547 None:intergenic 20.0%
!! TTAGAGAGAAAAAATATGTT+GGG + Chr2:11896410-11896429 MsG0280007202.01.T01:exon 20.0%
!! TTCAACCATAATATATTTCA+GGG + Chr2:11898397-11898416 MsG0280007202.01.T01:intron 20.0%
!! TTTAGAGAGAAAAAATATGT+TGG + Chr2:11896409-11896428 MsG0280007202.01.T01:exon 20.0%
!!! ATAAAACTTGTTGAAATTTG+GGG - Chr2:11898234-11898253 None:intergenic 20.0%
!!! ATATTTGAGTTGAAAATGTT+AGG + Chr2:11901214-11901233 MsG0280007202.01.T01:intron 20.0%
!!! GAATAAAACTTGTTGAAATT+TGG - Chr2:11898236-11898255 None:intergenic 20.0%
!!! TTTACAAAGTATAGTTTTTG+TGG - Chr2:11900499-11900518 None:intergenic 20.0%
!!! TTTTAATTAGCACACTAATA+TGG + Chr2:11900823-11900842 MsG0280007202.01.T01:intron 20.0%
! AAAAATTCCAAAGAAAAGAG+AGG - Chr2:11900199-11900218 None:intergenic 25.0%
! AAACTCAATTTCTATCTACT+CGG + Chr2:11900894-11900913 MsG0280007202.01.T01:intron 25.0%
! AATAGGTTTACTCATAATTG+TGG + Chr2:11902803-11902822 MsG0280007202.01.T01:three_prime_UTR 25.0%
! AATCTACAAATGAGTTTAAG+TGG + Chr2:11899545-11899564 MsG0280007202.01.T01:intron 25.0%
! AATTCCAATTTCCAATGTTT+AGG + Chr2:11902030-11902049 MsG0280007202.01.T01:intron 25.0%
! AATTTAAACTTGAGTTTGGT+AGG + Chr2:11900643-11900662 MsG0280007202.01.T01:intron 25.0%
! ACGAAAACTAGAATAAAACT+TGG - Chr2:11897595-11897614 None:intergenic 25.0%
! AGGTAATTTAAACTTGAGTT+TGG + Chr2:11900639-11900658 MsG0280007202.01.T01:intron 25.0%
! ATGGTTAAACACTTAACAAT+AGG + Chr2:11900842-11900861 MsG0280007202.01.T01:intron 25.0%
! ATTAAGCAACATTGAGTTTA+TGG + Chr2:11898642-11898661 MsG0280007202.01.T01:intron 25.0%
! ATTTATGATGAATTAACAGG+TGG + Chr2:11902649-11902668 MsG0280007202.01.T01:intron 25.0%
! CAGATTGAATTATTGATCTA+TGG + Chr2:11899395-11899414 MsG0280007202.01.T01:intron 25.0%
! CGCAATTGTTTAAAAAGAAA+AGG - Chr2:11899750-11899769 None:intergenic 25.0%
! CTAAATTATTCGTTGAAAGA+TGG - Chr2:11903022-11903041 None:intergenic 25.0%
! CTATCAATACATCTTAAGAT+TGG - Chr2:11899610-11899629 None:intergenic 25.0%
! CTCGAATAAAATATAAGAAG+TGG - Chr2:11897135-11897154 None:intergenic 25.0%
! CTTGATCAGAATTTATAAAG+TGG + Chr2:11898156-11898175 MsG0280007202.01.T01:intron 25.0%
! GAAAACCCTGAAATATATTA+TGG - Chr2:11898405-11898424 None:intergenic 25.0%
! GAAATTTCACATCTACTATT+TGG - Chr2:11900074-11900093 None:intergenic 25.0%
! GAGATAAATAAACATAAGAG+TGG - Chr2:11896851-11896870 None:intergenic 25.0%
! GAGTAAACCTATTTACATTA+TGG - Chr2:11902796-11902815 None:intergenic 25.0%
! GTTAACACAAAATTAAACTC+TGG + Chr2:11901079-11901098 MsG0280007202.01.T01:intron 25.0%
! GTTACAAAGAATGTGAAAAT+AGG + Chr2:11899141-11899160 MsG0280007202.01.T01:intron 25.0%
! GTTACCTATTTCATATTCAT+GGG + Chr2:11900916-11900935 MsG0280007202.01.T01:intron 25.0%
! GTTCAACCATAATATATTTC+AGG + Chr2:11898396-11898415 MsG0280007202.01.T01:intron 25.0%
! TAATACAAACAAAACGCTAT+TGG - Chr2:11901536-11901555 None:intergenic 25.0%
! TACATGTCTTATACTAAACA+TGG - Chr2:11901001-11901020 None:intergenic 25.0%
! TAGAGAGAAAAAATATGTTG+GGG + Chr2:11896411-11896430 MsG0280007202.01.T01:exon 25.0%
! TCATGAGTAAATTTCTTTCT+TGG - Chr2:11896727-11896746 None:intergenic 25.0%
! TCCCTATAATAAAGACTAAA+GGG - Chr2:11899508-11899527 None:intergenic 25.0%
! TCGAGAGCTATTATAATTAT+AGG + Chr2:11897150-11897169 MsG0280007202.01.T01:intron 25.0%
! TCTAATAGATTGTTGAAAGT+TGG - Chr2:11902187-11902206 None:intergenic 25.0%
! TGGTTCATTAAGGAAAAATA+AGG + Chr2:11897879-11897898 MsG0280007202.01.T01:intron 25.0%
! TGTTGCAATAGTAACAATTT+GGG + Chr2:11897732-11897751 MsG0280007202.01.T01:intron 25.0%
! TTAAGCAACATTGAGTTTAT+GGG + Chr2:11898643-11898662 MsG0280007202.01.T01:intron 25.0%
! TTCAATAAACTTTGATCCTT+TGG - Chr2:11898761-11898780 None:intergenic 25.0%
! TTCCCTATAATAAAGACTAA+AGG - Chr2:11899509-11899528 None:intergenic 25.0%
! TTGTAAGAGACAATAGATAA+TGG - Chr2:11902624-11902643 None:intergenic 25.0%
! TTTAATTAACCAAACAAGGT+AGG + Chr2:11898997-11899016 MsG0280007202.01.T01:intron 25.0%
! TTTGCTCTATGTAATGTATA+CGG - Chr2:11897263-11897282 None:intergenic 25.0%
!! AAATTCATTTGAAGTCAAGT+CGG + Chr2:11901958-11901977 MsG0280007202.01.T01:intron 25.0%
!! AATCTCTTAAGACTCTAAAA+AGG - Chr2:11901903-11901922 None:intergenic 25.0%
!! AATTTGCTTATAATAGTGAC+CGG + Chr2:11897037-11897056 MsG0280007202.01.T01:intron 25.0%
!! AATTTGCTTATAATAGTGAC+CGG - Chr2:11897056-11897037 None:intergenic 25.0%
!! AATTTTTACCAAAATAACGG+TGG - Chr2:11900607-11900626 None:intergenic 25.0%
!! CAATCTTAAGATGTATTGAT+AGG + Chr2:11899608-11899627 MsG0280007202.01.T01:intron 25.0%
!! TCTTTTTAAACAATTGCGAA+AGG + Chr2:11899752-11899771 MsG0280007202.01.T01:intron 25.0%
!! TTGTTTTCTATTTCATTGTC+TGG - Chr2:11900285-11900304 None:intergenic 25.0%
!! TTTTGTCCTAACATTTGATA+AGG - Chr2:11900027-11900046 None:intergenic 25.0%
!!! AGAAAGTCAACATTTTGAAA+TGG - Chr2:11900156-11900175 None:intergenic 25.0%
!!! ATCAATAGTCATTTTTCAAC+TGG + Chr2:11899800-11899819 MsG0280007202.01.T01:intron 25.0%
!!! CAAACTTTTTCAAAATGCAA+TGG + Chr2:11898605-11898624 MsG0280007202.01.T01:intron 25.0%
!!! TCATTTTTGATGGTTCATTA+AGG + Chr2:11897869-11897888 MsG0280007202.01.T01:intron 25.0%
!!! TTTATAAGATGTTGGTTTAG+TGG - Chr2:11902295-11902314 None:intergenic 25.0%
AAATAGTTTAGTACTCTCTC+CGG + Chr2:11896906-11896925 MsG0280007202.01.T01:intron 30.0%
AAATATGGAACTAGCTCAAT+TGG + Chr2:11897311-11897330 MsG0280007202.01.T01:intron 30.0%
AAATTACTAAACTCACCTTG+AGG - Chr2:11901683-11901702 None:intergenic 30.0%
AAGAAAAGATAGGCTTGTAT+TGG - Chr2:11899434-11899453 None:intergenic 30.0%
AATGAAACAGTAGTTGTTCT+TGG + Chr2:11900954-11900973 MsG0280007202.01.T01:intron 30.0%
AATTACTAAACTCACCTTGA+GGG - Chr2:11901682-11901701 None:intergenic 30.0%
ACATATAGTTGCCTAAACAT+TGG - Chr2:11902044-11902063 None:intergenic 30.0%
ACTGCAGTAATCTTATTCTT+TGG - Chr2:11902512-11902531 None:intergenic 30.0%
AGACAAAGACAAGATAACAT+AGG - Chr2:11898095-11898114 None:intergenic 30.0%
AGAGAATAAATTAGGAGTTG+AGG - Chr2:11902408-11902427 None:intergenic 30.0%
AGAGTAGATATCTTTCCAAA+TGG + Chr2:11902697-11902716 MsG0280007202.01.T01:exon 30.0%
AGATTAAACTATGTTGGATG+AGG - Chr2:11898522-11898541 None:intergenic 30.0%
AGTAATTATTGTTGCTGATG+TGG + Chr2:11898891-11898910 MsG0280007202.01.T01:intron 30.0%
ATAAAATCGTAGTGATATCG+TGG - Chr2:11900523-11900542 None:intergenic 30.0%
ATAACACGACTACATCTTTA+GGG + Chr2:11901137-11901156 MsG0280007202.01.T01:intron 30.0%
ATAATTCATCCTTGCAAAAC+CGG - Chr2:11898210-11898229 None:intergenic 30.0%
ATAGTAGATGTGAAATTTCG+TGG + Chr2:11900075-11900094 MsG0280007202.01.T01:CDS 30.0%
ATAGTTTGACCAACTCTAAT+TGG - Chr2:11900696-11900715 None:intergenic 30.0%
ATGTTAGGACAAAATTATCC+TGG + Chr2:11900033-11900052 MsG0280007202.01.T01:CDS 30.0%
ATTACATAGAGCAAACATGT+AGG + Chr2:11897268-11897287 MsG0280007202.01.T01:intron 30.0%
ATTGCAATTATTAGCCACTT+TGG + Chr2:11900119-11900138 MsG0280007202.01.T01:CDS 30.0%
ATTGCATTTCATCCAATCTT+AGG + Chr2:11899992-11900011 MsG0280007202.01.T01:intron 30.0%
CAAAGAATGTGAAAATAGGT+TGG + Chr2:11899145-11899164 MsG0280007202.01.T01:intron 30.0%
CATCCAAAAACTAGAGTTTA+TGG - Chr2:11898260-11898279 None:intergenic 30.0%
CCCTATAATAAAGACTAAAG+GGG - Chr2:11899507-11899526 None:intergenic 30.0%
CTGTCTAGTCAAAATGATTA+AGG + Chr2:11897957-11897976 MsG0280007202.01.T01:intron 30.0%
GAATAAGGATAAGGATAATG+TGG + Chr2:11900244-11900263 MsG0280007202.01.T01:CDS 30.0%
GAATCAGAATCTAATGCATA+TGG - Chr2:11902076-11902095 None:intergenic 30.0%
GACAAAGACAAGATAACATA+GGG - Chr2:11898094-11898113 None:intergenic 30.0%
GACTATAAGACATGTATGAA+GGG + Chr2:11902769-11902788 MsG0280007202.01.T01:three_prime_UTR 30.0%
GAGAATAAATTAGGAGTTGA+GGG - Chr2:11902407-11902426 None:intergenic 30.0%
GGTTACCTATTTCATATTCA+TGG + Chr2:11900915-11900934 MsG0280007202.01.T01:intron 30.0%
GTAATTATTGTTGCTGATGT+GGG + Chr2:11898892-11898911 MsG0280007202.01.T01:intron 30.0%
GTACAATTTACATAGCAACA+AGG - Chr2:11902440-11902459 None:intergenic 30.0%
GTGTTGCAATAGTAACAATT+TGG + Chr2:11897731-11897750 MsG0280007202.01.T01:intron 30.0%
TAAGCAACATTGAGTTTATG+GGG + Chr2:11898644-11898663 MsG0280007202.01.T01:intron 30.0%
TACTCATAATTGTGGAGAAT+GGG + Chr2:11902811-11902830 MsG0280007202.01.T01:three_prime_UTR 30.0%
TAGACTTTGCTTTCAAAGTT+TGG + Chr2:11901799-11901818 MsG0280007202.01.T01:intron 30.0%
TAGTCTCATATCGAATAGAT+AGG + Chr2:11898130-11898149 MsG0280007202.01.T01:intron 30.0%
TAGTGAATGTTTAATCTGAG+TGG - Chr2:11902162-11902181 None:intergenic 30.0%
TATCAAACTCTCACTTGATT+AGG + Chr2:11901983-11902002 MsG0280007202.01.T01:intron 30.0%
TATCTTGTCTTTGTCTTTGA+GGG + Chr2:11898099-11898118 MsG0280007202.01.T01:intron 30.0%
TATTACATTCGAAATGCAAC+TGG - Chr2:11902917-11902936 None:intergenic 30.0%
TGACTATAAGACATGTATGA+AGG + Chr2:11902768-11902787 MsG0280007202.01.T01:three_prime_UTR 30.0%
TGTTGCTATGTAAATTGTAC+AGG + Chr2:11902440-11902459 MsG0280007202.01.T01:intron 30.0%
TTACACACACTTAAATTGGA+TGG + Chr2:11900724-11900743 MsG0280007202.01.T01:intron 30.0%
TTACTCATAATTGTGGAGAA+TGG + Chr2:11902810-11902829 MsG0280007202.01.T01:three_prime_UTR 30.0%
TTATCTTGTCTTTGTCTTTG+AGG + Chr2:11898098-11898117 MsG0280007202.01.T01:intron 30.0%
TTCACTAATCCAATTAGAGT+TGG + Chr2:11900684-11900703 MsG0280007202.01.T01:intron 30.0%
! ACCCCTTTAGTCTTTATTAT+AGG + Chr2:11899503-11899522 MsG0280007202.01.T01:intron 30.0%
! AGGAAATTTTGTCCTAAGAT+TGG - Chr2:11900007-11900026 None:intergenic 30.0%
! ATAATAAGAAGTTAGCTTCG+AGG - Chr2:11899876-11899895 None:intergenic 30.0%
! ATATATTCGCCGATTAAGTT+AGG - Chr2:11897439-11897458 None:intergenic 30.0%
! ATTTTGTTCTTGTCTGTTGA+AGG + Chr2:11897635-11897654 MsG0280007202.01.T01:intron 30.0%
! CCCCTTTAGTCTTTATTATA+GGG + Chr2:11899504-11899523 MsG0280007202.01.T01:intron 30.0%
! GCAGTGTTTAAAATTTACCT+TGG - Chr2:11896626-11896645 None:intergenic 30.0%
! TCACTTGATAATCTCAAAGA+CGG - Chr2:11899845-11899864 None:intergenic 30.0%
! TTTTCAAAATGCAATGGATG+TGG + Chr2:11898611-11898630 MsG0280007202.01.T01:intron 30.0%
!! AATCTTCAGATTTCTAGAGT+AGG + Chr2:11900456-11900475 MsG0280007202.01.T01:intron 30.0%
!! ACAATTACCTCTAAAACTCT+TGG + Chr2:11902579-11902598 MsG0280007202.01.T01:intron 30.0%
!! AGTTTAGCCTTGTAATTCTA+AGG - Chr2:11902268-11902287 None:intergenic 30.0%
!! CATAGAGCACATTTTTAAAG+AGG + Chr2:11898686-11898705 MsG0280007202.01.T01:intron 30.0%
!! GTTTAGCCTTGTAATTCTAA+GGG - Chr2:11902267-11902286 None:intergenic 30.0%
!! TATTTTTGATAGGACCAATC+TGG + Chr2:11901554-11901573 MsG0280007202.01.T01:intron 30.0%
!! TCATATGATGGATGCATTAA+TGG + Chr2:11902724-11902743 MsG0280007202.01.T01:three_prime_UTR 30.0%
!! TCTAATTGGATTAGTGAAGA+GGG - Chr2:11900682-11900701 None:intergenic 30.0%
!! TTCAATTGAGTTGAACTCAT+GGG + Chr2:11897375-11897394 MsG0280007202.01.T01:intron 30.0%
!!! GATGTCATTGTCATTTTTGA+TGG + Chr2:11897859-11897878 MsG0280007202.01.T01:intron 30.0%
!!! TCACCATAAACTCTAGTTTT+TGG + Chr2:11898254-11898273 MsG0280007202.01.T01:intron 30.0%
!!! TGTTTGTTTGCTTTTTGCTA+AGG + Chr2:11898428-11898447 MsG0280007202.01.T01:intron 30.0%
AAAATTTACCTTGGTTGCCA+AGG - Chr2:11896617-11896636 None:intergenic 35.0%
AACAAAAAACGACTCTTGGT+TGG - Chr2:11898493-11898512 None:intergenic 35.0%
AATAGTAACAATTTGGGTGG+TGG + Chr2:11897738-11897757 MsG0280007202.01.T01:intron 35.0%
AATTTCGTGGTCACTTCAAA+TGG + Chr2:11900088-11900107 MsG0280007202.01.T01:CDS 35.0%
AGAAGGATGGAATAAGGATA+AGG + Chr2:11900235-11900254 MsG0280007202.01.T01:CDS 35.0%
ATAATGTGGAGTAGGTTGTT+GGG + Chr2:11900258-11900277 MsG0280007202.01.T01:CDS 35.0%
ATAGTAACAATTTGGGTGGT+GGG + Chr2:11897739-11897758 MsG0280007202.01.T01:intron 35.0%
ATAGTTGTCTATGTTCGAGA+AGG + Chr2:11898293-11898312 MsG0280007202.01.T01:intron 35.0%
ATCCTTATTCCATCCTTCTT+GGG - Chr2:11900234-11900253 None:intergenic 35.0%
ATCTCACCTTAATTGCGATT+TGG + Chr2:11898068-11898087 MsG0280007202.01.T01:intron 35.0%
ATCTTGTCTTTGTCTTTGAG+GGG + Chr2:11898100-11898119 MsG0280007202.01.T01:intron 35.0%
ATGATGAATTAACAGGTGGA+AGG + Chr2:11902653-11902672 MsG0280007202.01.T01:intron 35.0%
ATTTCGTGGTCACTTCAAAT+GGG + Chr2:11900089-11900108 MsG0280007202.01.T01:CDS 35.0%
CAAACAAGGTAGGTAAAGAT+AGG + Chr2:11899007-11899026 MsG0280007202.01.T01:intron 35.0%
CAAAGAAAAGAGAGGTTTGT+GGG - Chr2:11900191-11900210 None:intergenic 35.0%
CACACCCATGAATATGAAAT+AGG - Chr2:11900923-11900942 None:intergenic 35.0%
CACTTATTCATCGTATGAGA+TGG + Chr2:11897501-11897520 MsG0280007202.01.T01:intron 35.0%
CATAACACGACTACATCTTT+AGG + Chr2:11901136-11901155 MsG0280007202.01.T01:intron 35.0%
CCATCATATGATACTCCATT+TGG - Chr2:11902715-11902734 None:intergenic 35.0%
CTAGAGTAGGTTTAGATTCA+CGG + Chr2:11900469-11900488 MsG0280007202.01.T01:intron 35.0%
CTATCTTTACCTACCTTGTT+TGG - Chr2:11899009-11899028 None:intergenic 35.0%
CTCTATGTAATGTATACGGA+CGG - Chr2:11897259-11897278 None:intergenic 35.0%
CTTCAACAAAAAACGACTCT+TGG - Chr2:11898497-11898516 None:intergenic 35.0%
CTTTCCAACTTAGGTAGATT+AGG - Chr2:11900753-11900772 None:intergenic 35.0%
GAAGGGACCATAATGTAAAT+AGG + Chr2:11902786-11902805 MsG0280007202.01.T01:three_prime_UTR 35.0%
GAGATATTCTGCTTGTTTGA+AGG + Chr2:11901255-11901274 MsG0280007202.01.T01:CDS 35.0%
GATTATCAAATCATCGCCAT+TGG - Chr2:11897778-11897797 None:intergenic 35.0%
GGATGCATTAATGGAGTAAT+GGG + Chr2:11902733-11902752 MsG0280007202.01.T01:three_prime_UTR 35.0%
GTTACCTAATCTACCTAAGT+TGG + Chr2:11900746-11900765 MsG0280007202.01.T01:intron 35.0%
GTTGCCTAAACATTGGAAAT+TGG - Chr2:11902037-11902056 None:intergenic 35.0%
TAAGAAGGAACTAGCTCAAT+TGG + Chr2:11897346-11897365 MsG0280007202.01.T01:intron 35.0%
TAGCTAGCTATGAACTTTGT+TGG + Chr2:11896764-11896783 MsG0280007202.01.T01:intron 35.0%
TATCCTTATTCCATCCTTCT+TGG - Chr2:11900235-11900254 None:intergenic 35.0%
TGATGAATTAACAGGTGGAA+GGG + Chr2:11902654-11902673 MsG0280007202.01.T01:intron 35.0%
TGCAATAGTAACAATTTGGG+TGG + Chr2:11897735-11897754 MsG0280007202.01.T01:intron 35.0%
TGCTAATGAGGAGGAAATTT+GGG + Chr2:11902535-11902554 MsG0280007202.01.T01:CDS 35.0%
TGGAAAGGTTCCTCTATATT+GGG + Chr2:11901574-11901593 MsG0280007202.01.T01:CDS 35.0%
TGGATGCATTAATGGAGTAA+TGG + Chr2:11902732-11902751 MsG0280007202.01.T01:three_prime_UTR 35.0%
TGTAAACTAGTCATTAGTCC+CGG - Chr2:11902222-11902241 None:intergenic 35.0%
TGTTTAACAGAGGATGGAAT+GGG - Chr2:11896347-11896366 None:intergenic 35.0%
TTAACCTCTCACATCCTAAA+TGG - Chr2:11900340-11900359 None:intergenic 35.0%
TTGGAAAGATATCTACTCTG+TGG - Chr2:11902696-11902715 None:intergenic 35.0%
! AAAATAGGTTGGACCGAATT+AGG + Chr2:11899156-11899175 MsG0280007202.01.T01:intron 35.0%
! CCAAATGGAGTATCATATGA+TGG + Chr2:11902712-11902731 MsG0280007202.01.T01:three_prime_UTR 35.0%
! CTTGACCATTAATTTGACGT+GGG + Chr2:11902135-11902154 MsG0280007202.01.T01:intron 35.0%
! GCGATGATTTGATAATCAGT+CGG + Chr2:11897781-11897800 MsG0280007202.01.T01:intron 35.0%
! GCGTTGAAATTTTCTCTTCT+TGG + Chr2:11898464-11898483 MsG0280007202.01.T01:intron 35.0%
! TATTAGAACCGATTTCTTGC+CGG + Chr2:11902200-11902219 MsG0280007202.01.T01:intron 35.0%
! TCTTGACCATTAATTTGACG+TGG + Chr2:11902134-11902153 MsG0280007202.01.T01:intron 35.0%
! TTTTTGGATGCATGCAATCT+TGG + Chr2:11898270-11898289 MsG0280007202.01.T01:intron 35.0%
!! AAGAGAACCAAGAGTTTTAG+AGG - Chr2:11902589-11902608 None:intergenic 35.0%
!! CTCTAATTGGATTAGTGAAG+AGG - Chr2:11900683-11900702 None:intergenic 35.0%
!! GATGATGCTGATTTGCTTAA+AGG + Chr2:11901629-11901648 MsG0280007202.01.T01:CDS 35.0%
!! GTTCAATTGAGTTGAACTCA+TGG + Chr2:11897374-11897393 MsG0280007202.01.T01:intron 35.0%
!! TAATGACTAGTTTACAACCG+AGG + Chr2:11902226-11902245 MsG0280007202.01.T01:intron 35.0%
!! TTGATCCTTTGGAACGATAA+TGG - Chr2:11898750-11898769 None:intergenic 35.0%
!!! AAGGTCTTTGTTTTGTTGAG+AGG + Chr2:11897898-11897917 MsG0280007202.01.T01:intron 35.0%
!!! TTTTTTCTTATGGCCCAAGA+AGG + Chr2:11900218-11900237 MsG0280007202.01.T01:CDS 35.0%
ACAAATTGTCGTGACGCAAA+GGG - Chr2:11899369-11899388 None:intergenic 40.0%
ACAACATGATTAGCAGGGTA+AGG - Chr2:11901387-11901406 None:intergenic 40.0%
ATAGAGGAACCTTTCCAGAT+TGG - Chr2:11901571-11901590 None:intergenic 40.0%
ATAGGGCCAAATCGCAATTA+AGG - Chr2:11898077-11898096 None:intergenic 40.0%
ATCATCTTGAGCCGATAAGA+TGG + Chr2:11897821-11897840 MsG0280007202.01.T01:intron 40.0%
CAAATCAGCATCATCAGCAA+AGG - Chr2:11901624-11901643 None:intergenic 40.0%
CAAATTTCCTCCTCATTAGC+AGG - Chr2:11902536-11902555 None:intergenic 40.0%
CATGTTGTTGGTCATCTTAG+TGG + Chr2:11901399-11901418 MsG0280007202.01.T01:CDS 40.0%
CCAAAGAAAAGAGAGGTTTG+TGG - Chr2:11900192-11900211 None:intergenic 40.0%
CCATCCTCTGTTAAACACTA+GGG + Chr2:11896350-11896369 MsG0280007202.01.T01:five_prime_UTR 40.0%
CTGCGTGATCCTAACTTAAT+CGG + Chr2:11897427-11897446 MsG0280007202.01.T01:intron 40.0%
CTGCTAATGAGGAGGAAATT+TGG + Chr2:11902534-11902553 MsG0280007202.01.T01:CDS 40.0%
CTGGAAAGGTTCCTCTATAT+TGG + Chr2:11901573-11901592 MsG0280007202.01.T01:CDS 40.0%
CTTCGTCCCTTAGAATTACA+AGG + Chr2:11902258-11902277 MsG0280007202.01.T01:intron 40.0%
GAAGGATCTCTAGACAATCT+AGG + Chr2:11901273-11901292 MsG0280007202.01.T01:CDS 40.0%
GACCAACAACATGATTAGCA+GGG - Chr2:11901392-11901411 None:intergenic 40.0%
GATAATGTGGAGTAGGTTGT+TGG + Chr2:11900257-11900276 MsG0280007202.01.T01:CDS 40.0%
GCAGTTATTCCCCAATATAG+AGG - Chr2:11901587-11901606 None:intergenic 40.0%
GCTAATGAGGAGGAAATTTG+GGG + Chr2:11902536-11902555 MsG0280007202.01.T01:CDS 40.0%
GGAAAGGTTCCTCTATATTG+GGG + Chr2:11901575-11901594 MsG0280007202.01.T01:CDS 40.0%
GGACGAAGTTCAAATTTCCT+CGG - Chr2:11902246-11902265 None:intergenic 40.0%
GGATAAGGATAATGTGGAGT+AGG + Chr2:11900250-11900269 MsG0280007202.01.T01:CDS 40.0%
GGTAGGTAAAGATAGGTGTT+AGG + Chr2:11899014-11899033 MsG0280007202.01.T01:intron 40.0%
GTGTTTAACAGAGGATGGAA+TGG - Chr2:11896348-11896367 None:intergenic 40.0%
GTTTCAACCTTGTCTTACGT+CGG + Chr2:11899069-11899088 MsG0280007202.01.T01:intron 40.0%
TACCCTGCTAATCATGTTGT+TGG + Chr2:11901387-11901406 MsG0280007202.01.T01:CDS 40.0%
TAGTAACAATTTGGGTGGTG+GGG + Chr2:11897740-11897759 MsG0280007202.01.T01:intron 40.0%
TAGTCCCTAGTGTTTAACAG+AGG - Chr2:11896357-11896376 None:intergenic 40.0%
TATGAAACCGACGTAAGACA+AGG - Chr2:11899079-11899098 None:intergenic 40.0%
TATTGGGGAATAACTGCTGA+TGG + Chr2:11901590-11901609 MsG0280007202.01.T01:CDS 40.0%
TCATCTTGAGCCGATAAGAT+GGG + Chr2:11897822-11897841 MsG0280007202.01.T01:intron 40.0%
TCCATCCTCTGTTAAACACT+AGG + Chr2:11896349-11896368 MsG0280007202.01.T01:five_prime_UTR 40.0%
TCCATTGGATCACTAACTAG+TGG + Chr2:11896818-11896837 MsG0280007202.01.T01:intron 40.0%
TGACCAACAACATGATTAGC+AGG - Chr2:11901393-11901412 None:intergenic 40.0%
TGAGTTTATGGGGAAGAACA+AGG + Chr2:11898654-11898673 MsG0280007202.01.T01:intron 40.0%
TGATAATCAGTCGGTGAAAG+AGG + Chr2:11897790-11897809 MsG0280007202.01.T01:intron 40.0%
TGCTTATAATAGTGACCGGA+GGG + Chr2:11897041-11897060 MsG0280007202.01.T01:intron 40.0%
TTGATAGGACCAATCTGGAA+AGG + Chr2:11901559-11901578 MsG0280007202.01.T01:intron 40.0%
TTGCTTATAATAGTGACCGG+AGG + Chr2:11897040-11897059 MsG0280007202.01.T01:intron 40.0%
TTTCGTGGTCACTTCAAATG+GGG + Chr2:11900090-11900109 MsG0280007202.01.T01:CDS 40.0%
TTTGCTGCTGAAAAGGTTTG+TGG + Chr2:11896517-11896536 MsG0280007202.01.T01:CDS 40.0%
! AATTTGGGGTGCAACTTTCA+AGG + Chr2:11902550-11902569 MsG0280007202.01.T01:CDS 40.0%
! AGGAACGAAGAGCTTTAATC+AGG + Chr2:11898706-11898725 MsG0280007202.01.T01:intron 40.0%
! ATTAGAACCGATTTCTTGCC+GGG + Chr2:11902201-11902220 MsG0280007202.01.T01:intron 40.0%
! ATTGATGATCGCTGATCCAT+TGG + Chr2:11896803-11896822 MsG0280007202.01.T01:intron 40.0%
! CCACAAACCTCTCTTTTCTT+TGG + Chr2:11900189-11900208 MsG0280007202.01.T01:CDS 40.0%
! GAACGAAGAGCTTTAATCAG+GGG + Chr2:11898708-11898727 MsG0280007202.01.T01:intron 40.0%
! GACGTATTTTTCACTCCACT+CGG - Chr2:11897676-11897695 None:intergenic 40.0%
! GGAACGAAGAGCTTTAATCA+GGG + Chr2:11898707-11898726 MsG0280007202.01.T01:intron 40.0%
! TGTTTCTACTCAACAGCAGT+TGG + Chr2:11902464-11902483 MsG0280007202.01.T01:CDS 40.0%
!! AGGCTTGTATTGGTTGATCA+TGG - Chr2:11899424-11899443 None:intergenic 40.0%
!! CTTGTATTGGTTGATCATGG+GGG - Chr2:11899421-11899440 None:intergenic 40.0%
!! CTTTGGAACGATAATGGACT+CGG - Chr2:11898744-11898763 None:intergenic 40.0%
!! GACATCTAGCTTTCCAACTT+AGG - Chr2:11900762-11900781 None:intergenic 40.0%
!! GATTTGCTTAAAGGTGCTTG+TGG + Chr2:11901638-11901657 MsG0280007202.01.T01:CDS 40.0%
!! GCTTGTATTGGTTGATCATG+GGG - Chr2:11899422-11899441 None:intergenic 40.0%
!! GGCTTGTATTGGTTGATCAT+GGG - Chr2:11899423-11899442 None:intergenic 40.0%
!! TTTGGAACGATAATGGACTC+GGG - Chr2:11898743-11898762 None:intergenic 40.0%
AACAGAGGATGGAATGGGAT+GGG - Chr2:11896342-11896361 None:intergenic 45.0%
AACTTGAGTTTGGTAGGCAG+TGG + Chr2:11900649-11900668 MsG0280007202.01.T01:intron 45.0%
AGGATGTGAGAGGTTAAGAG+AGG + Chr2:11900343-11900362 MsG0280007202.01.T01:intron 45.0%
AGTCGGTGAAAGAGGAGATT+AGG + Chr2:11897798-11897817 MsG0280007202.01.T01:intron 45.0%
ATCCTTGCAAAACCGGAAAC+CGG - Chr2:11898203-11898222 None:intergenic 45.0%
ATCTTGAGCCGATAAGATGG+GGG + Chr2:11897824-11897843 MsG0280007202.01.T01:intron 45.0%
CACAAATTGTCGTGACGCAA+AGG - Chr2:11899370-11899389 None:intergenic 45.0%
CATCTTGAGCCGATAAGATG+GGG + Chr2:11897823-11897842 MsG0280007202.01.T01:intron 45.0%
CATTAGTCCCGGCAAGAAAT+CGG - Chr2:11902211-11902230 None:intergenic 45.0%
CCCTAGTGTTTAACAGAGGA+TGG - Chr2:11896353-11896372 None:intergenic 45.0%
CGAGTCCATTATCGTTCCAA+AGG + Chr2:11898742-11898761 MsG0280007202.01.T01:intron 45.0%
GAAAAGGTTTGTGGAGAGGA+AGG + Chr2:11896526-11896545 MsG0280007202.01.T01:CDS 45.0%
GCATGACAAAGACACCTTAC+AGG - Chr2:11899338-11899357 None:intergenic 45.0%
GCCACTAGTTAGTGATCCAA+TGG - Chr2:11896822-11896841 None:intergenic 45.0%
GGAAGCTTGAGACAGCAATA+TGG + Chr2:11901294-11901313 MsG0280007202.01.T01:CDS 45.0%
GGATGTGAGAGGTTAAGAGA+GGG + Chr2:11900344-11900363 MsG0280007202.01.T01:intron 45.0%
GTGGTCCCACGTCAAATTAA+TGG - Chr2:11902143-11902162 None:intergenic 45.0%
TAACAGAGGATGGAATGGGA+TGG - Chr2:11896343-11896362 None:intergenic 45.0%
TCACTTGCTTCTTTCCCTCA+AGG + Chr2:11901665-11901684 MsG0280007202.01.T01:CDS 45.0%
TCTACTCAACAGCAGTTGGA+GGG + Chr2:11902468-11902487 MsG0280007202.01.T01:CDS 45.0%
TGCTGAAAAGGTTTGTGGAG+AGG + Chr2:11896522-11896541 MsG0280007202.01.T01:CDS 45.0%
TGGTCAAAGAAAGTTGAGCC+AGG - Chr2:11900054-11900073 None:intergenic 45.0%
TGTTAGGTCATTCGCTGTGA+AGG + Chr2:11901230-11901249 MsG0280007202.01.T01:intron 45.0%
TTCTACTCAACAGCAGTTGG+AGG + Chr2:11902467-11902486 MsG0280007202.01.T01:CDS 45.0%
TTCTTATGGCCCAAGAAGGA+TGG + Chr2:11900222-11900241 MsG0280007202.01.T01:CDS 45.0%
! GTTGGCTTATACACACCATG+AGG + Chr2:11896586-11896605 MsG0280007202.01.T01:CDS 45.0%
! TGTCTTTGTCTTTGAGGGGA+TGG + Chr2:11898104-11898123 MsG0280007202.01.T01:intron 45.0%
!! GATAATGGACTCGGGTACTT+AGG - Chr2:11898735-11898754 None:intergenic 45.0%
!! AAACAAAAATAATTAAAATA+TGG + Chr2:11897296-11897315 MsG0280007202.01.T01:intron 5.0%
!!! TTTTTAAAAATATACATTTT+TGG + Chr2:11901760-11901779 MsG0280007202.01.T01:intron 5.0%
!!! TTTTTATTTATTTGAAAAAT+AGG + Chr2:11897700-11897719 MsG0280007202.01.T01:intron 5.0%
ACACACCCTACCTTACAAGC+CGG + Chr2:11898181-11898200 MsG0280007202.01.T01:intron 50.0%
AGCAAATTCGCCGACGTCTT+CGG - Chr2:11896503-11896522 None:intergenic 50.0%
GGCCCAAGAAGGATGGAATA+AGG + Chr2:11900229-11900248 MsG0280007202.01.T01:CDS 50.0%
GGGGATATTCAGTAGCTCAG+TGG + Chr2:11896430-11896449 MsG0280007202.01.T01:CDS 50.0%
GTTGAAGGCCCCAGAAGAAA+AGG + Chr2:11897650-11897669 MsG0280007202.01.T01:intron 50.0%
TACGGAAGCGACAAAGAGTG+TGG - Chr2:11901460-11901479 None:intergenic 50.0%
TACTGCAGTGCCTGCTAATG+AGG + Chr2:11902523-11902542 MsG0280007202.01.T01:CDS 50.0%
! AGCGACAAAGAGTGTGGAAG+TGG - Chr2:11901454-11901473 None:intergenic 50.0%
! CTACCTTACAAGCCGGTTTC+CGG + Chr2:11898188-11898207 MsG0280007202.01.T01:intron 50.0%
! GCGACGATCCACCGTTATTT+TGG + Chr2:11900596-11900615 MsG0280007202.01.T01:intron 50.0%
! GCTTGCTACCCCCATCTTAT+CGG - Chr2:11897835-11897854 None:intergenic 50.0%
! TCCACTCGGCCTTTTCTTCT+GGG - Chr2:11897662-11897681 None:intergenic 50.0%
!! AAACCGGAAACCGGCTTGTA+AGG - Chr2:11898194-11898213 None:intergenic 50.0%
!! AACAATTTGGGTGGTGGGGT+AGG + Chr2:11897744-11897763 MsG0280007202.01.T01:intron 50.0%
!! CGGCGAATTTGCTGCTGAAA+AGG + Chr2:11896510-11896529 MsG0280007202.01.T01:CDS 50.0%
!! GGAAACCGGCTTGTAAGGTA+GGG - Chr2:11898189-11898208 None:intergenic 50.0%
AGGAGTCACCTTGGCAACCA+AGG + Chr2:11896606-11896625 MsG0280007202.01.T01:CDS 55.0%
CACACCATGAGGAGTCACCT+TGG + Chr2:11896597-11896616 MsG0280007202.01.T01:CDS 55.0%
CGCCTCATAACTACTCCCTC+CGG - Chr2:11897059-11897078 None:intergenic 55.0%
CGTGACGCAAAGGGAGACTA+TGG - Chr2:11899360-11899379 None:intergenic 55.0%
GACCGGAGGGAGTAGTTATG+AGG + Chr2:11897054-11897073 MsG0280007202.01.T01:intron 55.0%
GGGGTAGGTAGGTGATCCAA+TGG + Chr2:11897759-11897778 MsG0280007202.01.T01:intron 55.0%
GTTGCCAAGGTGACTCCTCA+TGG - Chr2:11896604-11896623 None:intergenic 55.0%
TAGCTCAGTGGTGTCTCCTC+CGG + Chr2:11896442-11896461 MsG0280007202.01.T01:CDS 55.0%
TCTGTGGCTGCAAGAACTGC+TGG - Chr2:11902680-11902699 None:intergenic 55.0%
TGCAGTGCCTGCTAATGAGG+AGG + Chr2:11902526-11902545 MsG0280007202.01.T01:CDS 55.0%
TGGACAGTGCACAGCCAAAG+TGG - Chr2:11900136-11900155 None:intergenic 55.0%
! AGCTGTGTCACTGCAGGTTG+GGG + Chr2:11896553-11896572 MsG0280007202.01.T01:CDS 55.0%
! CAGCTGTGTCACTGCAGGTT+GGG + Chr2:11896552-11896571 MsG0280007202.01.T01:CDS 55.0%
! CCACTCGGCCTTTTCTTCTG+GGG - Chr2:11897661-11897680 None:intergenic 55.0%
! CTCCACTCGGCCTTTTCTTC+TGG - Chr2:11897663-11897682 None:intergenic 55.0%
! TCAGCTGTGTCACTGCAGGT+TGG + Chr2:11896551-11896570 MsG0280007202.01.T01:CDS 55.0%
!! AGCCGGTTTCCGGTTTTGCA+AGG + Chr2:11898198-11898217 MsG0280007202.01.T01:intron 55.0%
!! ATTTGGGTGGTGGGGTAGGT+AGG + Chr2:11897748-11897767 MsG0280007202.01.T01:intron 55.0%
!! CGGAAACCGGCTTGTAAGGT+AGG - Chr2:11898190-11898209 None:intergenic 55.0%
AACACCGTCGCCGAAGACGT+CGG + Chr2:11896490-11896509 MsG0280007202.01.T01:CDS 60.0%
ACGTCTTCGGCGACGGTGTT+CGG - Chr2:11896490-11896509 None:intergenic 60.0%
CCCCAGAAGAAAAGGCCGAG+TGG + Chr2:11897658-11897677 MsG0280007202.01.T01:intron 60.0%
GGTTGGGGAGGATGTGCAGT+TGG + Chr2:11896568-11896587 MsG0280007202.01.T01:CDS 60.0%
! GGCTTCAGCTGTGTCACTGC+AGG + Chr2:11896547-11896566 MsG0280007202.01.T01:CDS 60.0%
! TGTGTCACTGCAGGTTGGGG+AGG + Chr2:11896556-11896575 MsG0280007202.01.T01:CDS 60.0%
CTCAGTGGTGTCTCCTCCGG+AGG + Chr2:11896445-11896464 MsG0280007202.01.T01:CDS 65.0%
TTCGCCGACGTCTTCGGCGA+CGG - Chr2:11896497-11896516 None:intergenic 65.0%
CCAGCAGCCACCAGCTCCTC+CGG - Chr2:11896464-11896483 None:intergenic 70.0%
GGTGTCTCCTCCGGAGGAGC+TGG + Chr2:11896451-11896470 MsG0280007202.01.T01:CDS 70.0%
GTCTCCTCCGGAGGAGCTGG+TGG + Chr2:11896454-11896473 MsG0280007202.01.T01:CDS 70.0%
CCGGAGGAGCTGGTGGCTGC+TGG + Chr2:11896461-11896480 MsG0280007202.01.T01:CDS 75.0%
GCAGCCACCAGCTCCTCCGG+AGG - Chr2:11896461-11896480 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr2 gene 11896338 11903052 11896338 ID=MsG0280007202.01;Name=MsG0280007202.01
Chr2 mRNA 11896338 11903052 11896338 ID=MsG0280007202.01.T01;Parent=MsG0280007202.01;Name=MsG0280007202.01.T01;_AED=0.39;_eAED=0.39;_QI=87|0.6|0.83|1|1|1|6|349|343
Chr2 exon 11896338 11896627 11896338 ID=MsG0280007202.01.T01:exon:3621;Parent=MsG0280007202.01.T01
Chr2 exon 11900014 11900334 11900014 ID=MsG0280007202.01.T01:exon:3622;Parent=MsG0280007202.01.T01
Chr2 exon 11901236 11901476 11901236 ID=MsG0280007202.01.T01:exon:3623;Parent=MsG0280007202.01.T01
Chr2 exon 11901566 11901686 11901566 ID=MsG0280007202.01.T01:exon:3624;Parent=MsG0280007202.01.T01
Chr2 exon 11902462 11902571 11902462 ID=MsG0280007202.01.T01:exon:3625;Parent=MsG0280007202.01.T01
Chr2 exon 11902668 11903052 11902668 ID=MsG0280007202.01.T01:exon:3626;Parent=MsG0280007202.01.T01
Chr2 five_prime_UTR 11896338 11896424 11896338 ID=MsG0280007202.01.T01:five_prime_utr;Parent=MsG0280007202.01.T01
Chr2 CDS 11896425 11896627 11896425 ID=MsG0280007202.01.T01:cds;Parent=MsG0280007202.01.T01
Chr2 CDS 11900014 11900334 11900014 ID=MsG0280007202.01.T01:cds;Parent=MsG0280007202.01.T01
Chr2 CDS 11901236 11901476 11901236 ID=MsG0280007202.01.T01:cds;Parent=MsG0280007202.01.T01
Chr2 CDS 11901566 11901686 11901566 ID=MsG0280007202.01.T01:cds;Parent=MsG0280007202.01.T01
Chr2 CDS 11902462 11902571 11902462 ID=MsG0280007202.01.T01:cds;Parent=MsG0280007202.01.T01
Chr2 CDS 11902668 11902703 11902668 ID=MsG0280007202.01.T01:cds;Parent=MsG0280007202.01.T01
Chr2 three_prime_UTR 11902704 11903052 11902704 ID=MsG0280007202.01.T01:three_prime_utr;Parent=MsG0280007202.01.T01
Gene Sequence

>MsG0280007202.01.T01

ATGTTGGGGATATTCAGTAGCTCAGTGGTGTCTCCTCCGGAGGAGCTGGTGGCTGCTGGTAGCCGAACACCGTCGCCGAAGACGTCGGCGAATTTGCTGCTGAAAAGGTTTGTGGAGAGGAAGGCTTCAGCTGTGTCACTGCAGGTTGGGGAGGATGTGCAGTTGGCTTATACACACCATGAGGAGTCACCTTGGCAACCAAGGACAAAATTTCCTTATCAAATGTTAGGACAAAATTATCCTGGCTCAACTTTCTTTGACCAAATAGTAGATGTGAAATTTCGTGGTCACTTCAAATGGGGTGTTCGATTGCAATTATTAGCCACTTTGGCTGTGCACTGTCCATTTCAAAATGTTGACTTTCTCACTTTCATTTACCCACAAACCTCTCTTTTCTTTGGAATTTTTTTTTTCTTATGGCCCAAGAAGGATGGAATAAGGATAAGGATAATGTGGAGTAGGTTGTTGGGACCAGACAATGAAATAGAAAACAATATAAACAATAAGACAAAGATTGTGTCACAGTCATTCGCTGTGAAGGATGAGATATTCTGCTTGTTTGAAGGATCTCTAGACAATCTAGGAAGCTTGAGACAGCAATATGGACTTTCAAAATCTGCAAATGAAGTAGTTCTTATGATTGAAGCTTACAAAGCTTTACGTGATAGAGCACCTTACCCTGCTAATCATGTTGTTGGTCATCTTAGTGGTAGTTTTGCTTTCATAGTTTTCGACAAATCCACTTCCACACTCTTTGTCGCTTCCGACCAATCTGGAAAGGTTCCTCTATATTGGGGAATAACTGCTGATGGATATGTAGCCTTTGCTGATGATGCTGATTTGCTTAAAGGTGCTTGTGGAAAGTCACTTGCTTCTTTCCCTCAAGGATGTTTCTACTCAACAGCAGTTGGAGGGTTAAGATGTTATGAGAATCCAAAGAATAAGATTACTGCAGTGCCTGCTAATGAGGAGGAAATTTGGGGTGCAACTTTCAAGGTGGAAGGGCCAGCAGTTCTTGCAGCCACAGAGTAG
Protein sequence

>MsG0280007202.01.T01

MLGIFSSSVVSPPEELVAAGSRTPSPKTSANLLLKRFVERKASAVSLQVGEDVQLAYTHHEESPWQPRTKFPYQMLGQNYPGSTFFDQIVDVKFRGHFKWGVRLQLLATLAVHCPFQNVDFLTFIYPQTSLFFGIFFFLWPKKDGIRIRIMWSRLLGPDNEIENNINNKTKIVSQSFAVKDEIFCLFEGSLDNLGSLRQQYGLSKSANEVVLMIEAYKALRDRAPYPANHVVGHLSGSFAFIVFDKSTSTLFVASDQSGKVPLYWGITADGYVAFADDADLLKGACGKSLASFPQGCFYSTAVGGLRCYENPKNKITAVPANEEEIWGATFKVEGPAVLAATE*