AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280007407.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007407.01.T01 MTR_2g024310 92.517 147 7 1 4 146 354 500 6.82e-94 280
MsG0280007407.01.T01 MTR_2g024310 92.035 113 5 1 4 112 386 498 1.11e-67 213
MsG0280007407.01.T02 MTR_2g024310 72.263 137 26 2 37 173 371 495 1.59e-57 187
MsG0280007407.01.T02 MTR_2g024310 95.714 70 3 0 37 106 403 472 5.74e-41 144
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007407.01.T01 AT4G04320 67.460 126 41 0 12 137 390 515 7.99e-55 180
MsG0280007407.01.T01 AT4G04320 67.460 126 41 0 12 137 389 514 9.79e-55 179
MsG0280007407.01.T02 AT4G04320 46.923 130 57 2 40 169 398 515 1.78e-27 107
MsG0280007407.01.T02 AT4G04320 46.923 130 57 2 40 169 397 514 1.80e-27 107

Find 204 sgRNAs with CRISPR-Local

Find 434 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCACTTGTTGCCTCACTTTC+AGG 0.127574 2:+15001046 None:intergenic
ACCATATTATTAAGAGATTT+TGG 0.140104 2:-15002302 MsG0280007407.01.T01:five_prime_UTR
ACATTATTTGTCATCATTAA+TGG 0.153500 2:+14999243 None:intergenic
TTGTTTGTTGTATCATTATT+TGG 0.184858 2:+15005168 None:intergenic
CTTAAATAGTTTGACAAGTA+TGG 0.185614 2:-15002416 MsG0280007407.01.T01:five_prime_UTR
GCAACTTCAATGAAAATTAA+AGG 0.210725 2:+15001201 None:intergenic
TTATGAACTGTTTACATATA+TGG 0.212339 2:+15005049 None:intergenic
AGAAAACAAGCCTTCTTCTT+TGG 0.239154 2:+15003510 None:intergenic
GATCTAAAAGGTTGCTTATA+GGG 0.246771 2:+15002769 None:intergenic
TGAAAATAACATGGAAGTTT+AGG 0.273860 2:+14997708 None:intergenic
GGGAATTGGCCGTCGTGTTT+TGG 0.277985 2:-15002733 MsG0280007407.01.T01:five_prime_UTR
TTTAATGCTGACGAAATTTC+CGG 0.279448 2:+14999063 None:intergenic
TGGAAATTCAAGGAGATTAA+AGG 0.286676 2:+15002853 None:intergenic
ATCCAATTCGTTGGTGAAAT+AGG 0.290053 2:-14997745 MsG0280007407.01.T01:three_prime_UTR
TGTAATTTGGTGTAGTTCTA+AGG 0.291998 2:+15002931 None:intergenic
TCCAAAATCTCTTAATAATA+TGG 0.295965 2:+15002301 None:intergenic
GTTTGGTTTCTCTTCAAGTT+AGG 0.296011 2:-15002613 MsG0280007407.01.T01:five_prime_UTR
GTCCATTAGTTAGAGATAAA+AGG 0.306055 2:-15002344 MsG0280007407.01.T01:five_prime_UTR
GTGTGATTGAAATTCAAATT+TGG 0.310656 2:-14997546 MsG0280007407.01.T01:three_prime_UTR
ACAGAAGTTCTGTGATTGTT+TGG 0.310853 2:+15001312 None:intergenic
ACCTTCTCTTAAGATCTAAA+AGG 0.314143 2:+15002757 None:intergenic
CTCCCAAGTTAGAACTTAGA+AGG 0.315132 2:+15001575 None:intergenic
AGATCTAAAAGGTTGCTTAT+AGG 0.321737 2:+15002768 None:intergenic
TATCAAACGTGTTGTAAAAC+TGG 0.322632 2:-15000689 MsG0280007407.01.T01:five_prime_UTR
TATAATTATTTGAAATGCTT+TGG 0.328857 2:+15002517 None:intergenic
GCAGGATCATCCATGTAATT+TGG 0.331310 2:+15002918 None:intergenic
GAAGACTAAGCAACATGATA+TGG 0.331883 2:+15002833 None:intergenic
GAAGCTGAATTTCCATCTTC+AGG 0.332460 2:+15004760 None:intergenic
CCGCTGAGATGTTAGTTAAA+AGG 0.335772 2:+15002117 None:intergenic
AGATGGTTGAAAGAATAAAT+TGG 0.337796 2:-14998571 MsG0280007407.01.T01:CDS
ATCTATTTAGTTGACTCATT+TGG 0.338173 2:-15002215 MsG0280007407.01.T01:five_prime_UTR
AACTGCTGACCAGGAATTGC+TGG 0.342950 2:+15002701 None:intergenic
GAGAGATTGAATACAGTTAG+AGG 0.344956 2:+15004952 None:intergenic
ATCCTATTTCACCAACGAAT+TGG 0.348692 2:+14997743 None:intergenic
TAATTATAAGCATATTTGAT+TGG 0.354431 2:-15002502 MsG0280007407.01.T01:five_prime_UTR
GGATCCACTCACTTGAGCTT+TGG 0.357651 2:+15003531 None:intergenic
CAGAAGTTCTGTGATTGTTT+GGG 0.358403 2:+15001313 None:intergenic
GACCCACAGAAGCAATAATA+AGG 0.359504 2:-15002389 MsG0280007407.01.T01:five_prime_UTR
TAGAGGAGAGGGAGAGAGAA+AGG 0.369500 2:+15004969 None:intergenic
TAAAACATTAAAGAGAAAAT+CGG 0.371620 2:-15002475 MsG0280007407.01.T01:five_prime_UTR
GAATGCTTATGAAGAGAAAA+AGG 0.380812 2:-15001743 MsG0280007407.01.T01:five_prime_UTR
TCATAGATCAGACATTAAAT+AGG 0.384989 2:-15001787 MsG0280007407.01.T01:five_prime_UTR
ATTGAAAAGATTAGGATCAT+AGG 0.386761 2:-15001432 MsG0280007407.01.T01:five_prime_UTR
TGGCGACCACTGAAATTCAT+TGG 0.387176 2:+15001885 None:intergenic
AATTATAAGCATATTTGATT+GGG 0.387437 2:-15002501 MsG0280007407.01.T01:five_prime_UTR
CATCCTTATTATTGCTTCTG+TGG 0.389280 2:+15002386 None:intergenic
GAGATCCATTCCCACAATAT+TGG 0.390087 2:+15001865 None:intergenic
TCATAAGTGTCTTCTTCATC+AGG 0.390520 2:+14999932 None:intergenic
CAATTTCCAATGATAGATTC+AGG 0.391330 2:+14998776 None:intergenic
GGATGATCCTGCCTCCCTGC+TGG 0.391993 2:-15002907 MsG0280007407.01.T01:five_prime_UTR
ATGGCAGACCTATCAGAAAA+AGG 0.396637 2:-14998548 MsG0280007407.01.T01:CDS
CGGTGAATGAATCCATTTGT+AGG 0.397648 2:+14999083 None:intergenic
TCATGGTGAACTATGTATAT+AGG 0.401137 2:-14998505 MsG0280007407.01.T01:intron
CAACCAGTGGCCGAGGGATC+TGG 0.401400 2:-14999983 MsG0280007407.01.T01:five_prime_UTR
CTTTGATGCGCTTATGTGCC+AGG 0.402153 2:-14999035 MsG0280007407.01.T01:intron
GAAGAAGAGAGGAAAAGCTT+TGG 0.405389 2:-14998840 MsG0280007407.01.T01:CDS
ATTATATACATGGCTAAATC+TGG 0.405491 2:-15002654 MsG0280007407.01.T01:five_prime_UTR
TTAGATCTTAAGAGAAGGTT+GGG 0.406886 2:-15002753 MsG0280007407.01.T01:five_prime_UTR
ATCCTTATTATTGCTTCTGT+GGG 0.410564 2:+15002387 None:intergenic
AAGAGCCACGTCATGAATCC+TGG 0.411178 2:+15000052 None:intergenic
TAGTCTTACACGGGGTATAT+AGG 0.411791 2:-14997675 MsG0280007407.01.T01:three_prime_UTR
ATCAAAGAGAATTCATAAAC+TGG 0.416174 2:+15003446 None:intergenic
TATTGCTTCTTTGAGAGCAT+TGG 0.417799 2:-15002999 MsG0280007407.01.T01:five_prime_UTR
CTTAAGAGAAGGTTGGGAAT+TGG 0.426670 2:-15002747 MsG0280007407.01.T01:five_prime_UTR
TCATCGCCATGTTGAGGTAA+TGG 0.428956 2:-14998108 MsG0280007407.01.T01:intron
AACCCTTCTAAGTTCTAACT+TGG 0.429182 2:-15001578 MsG0280007407.01.T01:five_prime_UTR
GAGATCAATGAACAAAGTAT+TGG 0.433413 2:-14997520 MsG0280007407.01.T01:three_prime_UTR
TATCTATCTCTTCAAAAGAA+TGG 0.435376 2:+15001634 None:intergenic
TTGACTCATTTGGTGAGAAA+AGG 0.438952 2:-15002205 MsG0280007407.01.T01:five_prime_UTR
CACTGTTTGAGATGCCAACT+TGG 0.442491 2:+15000027 None:intergenic
TTGAATACAGTTAGAGGAGA+GGG 0.442738 2:+15004958 None:intergenic
ATATTACATCCAGCAATTCC+TGG 0.442824 2:-15002710 MsG0280007407.01.T01:five_prime_UTR
TGTTGCAGAGATATTGCAAC+GGG 0.443227 2:-14999150 MsG0280007407.01.T01:intron
TTAGAGATAAAAGGAGAAAG+AGG 0.445776 2:-15002335 MsG0280007407.01.T01:five_prime_UTR
CTCTCTTCTTCTCTTTCAGT+AGG 0.448470 2:+14998852 None:intergenic
AGCATTTATTGTGGAAAAGA+AGG 0.449667 2:-15002450 MsG0280007407.01.T01:five_prime_UTR
CATTTGGTGAGAAAAGGCTT+TGG 0.453965 2:-15002199 MsG0280007407.01.T01:five_prime_UTR
AGCGTATCATTGAAAAGATT+AGG 0.457738 2:-15001440 MsG0280007407.01.T01:five_prime_UTR
AGAACAATGGTTAGCTTACA+TGG 0.458261 2:-15002027 MsG0280007407.01.T01:five_prime_UTR
GTATGTCCTGAATCTATCAT+TGG 0.459811 2:-14998782 MsG0280007407.01.T01:intron
TGAAATTAGTTTCACATGAA+AGG 0.463787 2:+15001697 None:intergenic
TGAGAGTAATGAAATATGAT+TGG 0.464613 2:+15001983 None:intergenic
CAGGATATTTGCTCGAAGAA+TGG 0.465463 2:+15003387 None:intergenic
AATCACACACTCTTCATTGA+GGG 0.471848 2:+14997561 None:intergenic
TTTAGATCTTAAGAGAAGGT+TGG 0.473354 2:-15002754 MsG0280007407.01.T01:five_prime_UTR
TTCAGTGGTCGCCAATATTG+TGG 0.473916 2:-15001876 MsG0280007407.01.T01:five_prime_UTR
GATTGAAATTCAAATTTGGT+TGG 0.474619 2:-14997542 MsG0280007407.01.T01:three_prime_UTR
AACAATCCTCACTAACGAAA+AGG 0.476932 2:-15005150 MsG0280007407.01.T01:five_prime_UTR
GGCGACCACTGAAATTCATT+GGG 0.476961 2:+15001886 None:intergenic
AAGTTGATCCCTGCTAAGCC+TGG 0.476969 2:+15000724 None:intergenic
GAATGTGGCTCAAACTATAC+AGG 0.478281 2:-15001169 MsG0280007407.01.T01:intron
CATTCTTCGAGCAAATATCC+TGG 0.479785 2:-15003386 MsG0280007407.01.T01:five_prime_UTR
TGACAACACCTACTGCAGTC+TGG 0.480411 2:-14998195 MsG0280007407.01.T01:intron
GTTGCCTCACTTTCAGGTAT+CGG 0.481314 2:+15001052 None:intergenic
TGTAGGTTGTAGAAGTAAGC+AGG 0.482342 2:+14999100 None:intergenic
CTACAAATGGATTCATTCAC+CGG 0.483764 2:-14999082 MsG0280007407.01.T01:CDS
CAGCGGGACACTATTTAACC+TGG 0.485037 2:-15002100 MsG0280007407.01.T01:five_prime_UTR
TTACTTCTACAACCTACAAA+TGG 0.485584 2:-14999095 MsG0280007407.01.T01:CDS
CAACATGATATGGAAATTCA+AGG 0.492316 2:+15002843 None:intergenic
CAAGTTCAGTAACAAAGTGT+TGG 0.492750 2:+15002677 None:intergenic
GATCGTCTCAACACTCATCC+TGG 0.497302 2:-15003426 MsG0280007407.01.T01:five_prime_UTR
GAGAGGGAGAGAGAAAGGTT+AGG 0.497572 2:+15004974 None:intergenic
GAACCAGATCCCTCGGCCAC+TGG 0.497877 2:+14999980 None:intergenic
AAAACATTAAAGAGAAAATC+GGG 0.499245 2:-15002474 MsG0280007407.01.T01:five_prime_UTR
ATATCACATTGTACTGGTTG+CGG 0.500928 2:+14997617 None:intergenic
CACACTCTTCATTGAGGGAT+AGG 0.501352 2:+14997566 None:intergenic
CTGGCACATAAGCGCATCAA+AGG 0.501926 2:+14999036 None:intergenic
CAATCACACACTCTTCATTG+AGG 0.503075 2:+14997560 None:intergenic
TCAGTGGTCGCCAATATTGT+GGG 0.503708 2:-15001875 MsG0280007407.01.T01:five_prime_UTR
TGGTGTAGTTCTAAGGCAGC+AGG 0.504589 2:+15002938 None:intergenic
TTTGTCATCATTAATGGCCA+AGG 0.505198 2:+14999249 None:intergenic
CCTTGGACTTGAACTTCAGC+TGG 0.505908 2:-15003659 MsG0280007407.01.T01:intron
CATGTCACAACCAGTGGCCG+AGG 0.509305 2:-14999990 MsG0280007407.01.T01:five_prime_UTR
ACTGAACTTGATTATATACA+TGG 0.509999 2:-15002664 MsG0280007407.01.T01:five_prime_UTR
TGGCACATAAGCGCATCAAA+GGG 0.510004 2:+14999037 None:intergenic
ATTCAATATCTTGTGTAGGC+TGG 0.510372 2:-15002794 MsG0280007407.01.T01:five_prime_UTR
TTAACTTACGCGGAATATCC+AGG 0.511990 2:+15003368 None:intergenic
AAGTTCAGTAACAAAGTGTT+GGG 0.512264 2:+15002678 None:intergenic
AGTGTTGGGAACTGCTGACC+AGG 0.512459 2:+15002692 None:intergenic
TGATGCCTCCACTTTGAGAA+AGG 0.513988 2:+14998525 None:intergenic
TCACAGAAATCACCTGAAGA+TGG 0.515200 2:-15004772 MsG0280007407.01.T01:five_prime_UTR
GCAACTCTCAGTCCCATCCC+AGG 0.518470 2:-15000070 MsG0280007407.01.T01:five_prime_UTR
ATCGCATTGAGTGGAATTTG+AGG 0.521626 2:-15003481 MsG0280007407.01.T01:five_prime_UTR
ATTGAATACAGTTAGAGGAG+AGG 0.527986 2:+15004957 None:intergenic
GGTCGCCAATATTGTGGGAA+TGG 0.532949 2:-15001870 MsG0280007407.01.T01:five_prime_UTR
AGCACTACTCAAACATGCCT+TGG 0.533903 2:-14999266 MsG0280007407.01.T01:intron
AAGGATGGTAGACTAGATAG+AGG 0.537102 2:-15002370 MsG0280007407.01.T01:five_prime_UTR
GATGAAGATCACTTGAAGCT+TGG 0.537972 2:+14998126 None:intergenic
GGCTTAGCAGGGATCAACTT+GGG 0.537991 2:-15000721 MsG0280007407.01.T01:five_prime_UTR
AGGCTTAGCAGGGATCAACT+TGG 0.540053 2:-15000722 MsG0280007407.01.T01:five_prime_UTR
TTCTCAAAGTGGAGGCATCA+TGG 0.541050 2:-14998522 MsG0280007407.01.T01:CDS
GAATTCATAAACTGGCTGAA+TGG 0.542700 2:+15003454 None:intergenic
TAGATCAGACATTAAATAGG+TGG 0.543439 2:-15001784 MsG0280007407.01.T01:five_prime_UTR
TATCAACAATTAAAAGTACA+AGG 0.544231 2:+14997809 None:intergenic
ATCACAATATCACATTGTAC+TGG 0.548121 2:+14997611 None:intergenic
GTGAGTGGATCCAAAGAAGA+AGG 0.548810 2:-15003520 MsG0280007407.01.T01:five_prime_UTR
CCGATGATGCTAGTCTTACA+CGG 0.554436 2:-14997685 MsG0280007407.01.T01:three_prime_UTR
TAGAACTACACCAAATTACA+TGG 0.558456 2:-15002928 MsG0280007407.01.T01:five_prime_UTR
ACCCTTCTAAGTTCTAACTT+GGG 0.558720 2:-15001577 MsG0280007407.01.T01:five_prime_UTR
AAATCGGGTAGCATTTATTG+TGG 0.566271 2:-15002459 MsG0280007407.01.T01:five_prime_UTR
CATCATCGGTGAAAATAACA+TGG 0.569598 2:+14997699 None:intergenic
GACGTGGCTCTTATCCAAGT+TGG 0.569906 2:-15000041 MsG0280007407.01.T01:five_prime_UTR
GTATGTGACACAACAGTAGT+GGG 0.570804 2:+15001545 None:intergenic
TCTCAAACAGTGCTTGCTGA+AGG 0.571269 2:-15000016 MsG0280007407.01.T01:five_prime_UTR
AAAATACTTACAGAAATATG+TGG 0.572317 2:+15000652 None:intergenic
CACAGAAGCAATAATAAGGA+TGG 0.573989 2:-15002385 MsG0280007407.01.T01:five_prime_UTR
CACGTCATGAATCCTGGGAT+GGG 0.575233 2:+15000058 None:intergenic
TCTTCTTCTATCGCATTGAG+TGG 0.576014 2:-15003490 MsG0280007407.01.T01:five_prime_UTR
ATAAATTCAATATCTTGTGT+AGG 0.576548 2:-15002798 MsG0280007407.01.T01:five_prime_UTR
TCCCAAGTTAGAACTTAGAA+GGG 0.576645 2:+15001576 None:intergenic
GCTCATTCATACTTCAGCAA+CGG 0.576758 2:-14998155 MsG0280007407.01.T01:CDS
GGAAAGAATCTCAAACCTCC+AGG 0.577303 2:+15003408 None:intergenic
AAGTATGTTCTCATAGAATG+TGG 0.578509 2:+14999958 None:intergenic
GCCTCACTTTCAGGTATCGG+AGG 0.579979 2:+15001055 None:intergenic
TGAAAATCTACTAACTTGAG+AGG 0.582572 2:-15001659 MsG0280007407.01.T01:five_prime_UTR
AGAGCCACGTCATGAATCCT+GGG 0.583013 2:+15000053 None:intergenic
AGACTCATAATATTGAATCC+AGG 0.584089 2:+15002082 None:intergenic
GAATGTGGAACCAGATCCCT+CGG 0.584295 2:+14999973 None:intergenic
CCACGTCATGAATCCTGGGA+TGG 0.585597 2:+15000057 None:intergenic
TATGTTATCCAGACTGCAGT+AGG 0.585997 2:+14998187 None:intergenic
TTTGACCCAATGAATTTCAG+TGG 0.586018 2:-15001891 MsG0280007407.01.T01:five_prime_UTR
ACACTCTTCATTGAGGGATA+GGG 0.587651 2:+14997567 None:intergenic
ATTCGTTGGTGAAATAGGAT+AGG 0.587782 2:-14997740 MsG0280007407.01.T01:three_prime_UTR
AGATCAGACATTAAATAGGT+GGG 0.590317 2:-15001783 MsG0280007407.01.T01:five_prime_UTR
CCGTGTAAGACTAGCATCAT+CGG 0.590646 2:+14997685 None:intergenic
ACATATCTAATCCAATTCGT+TGG 0.596305 2:-14997754 MsG0280007407.01.T01:three_prime_UTR
TCTCGGGTGAAAATATAACA+TGG 0.596369 2:+15001840 None:intergenic
AGTATGTGACACAACAGTAG+TGG 0.596883 2:+15001544 None:intergenic
GGTTGAAAGAATAAATTGGA+TGG 0.598776 2:-14998567 MsG0280007407.01.T01:CDS
CTACTCTATATCATCAACTC+AGG 0.603114 2:-15001017 MsG0280007407.01.T01:intron
CCATCCCAGGATTCATGACG+TGG 0.605688 2:-15000057 MsG0280007407.01.T01:five_prime_UTR
GCAGCCAAAGCTCAAGTGAG+TGG 0.606608 2:-15003535 MsG0280007407.01.T01:intron
CGATGATGCTAGTCTTACAC+GGG 0.607662 2:-14997684 MsG0280007407.01.T01:three_prime_UTR
TGATCTTCATCGCCATGTTG+AGG 0.608391 2:-14998114 MsG0280007407.01.T01:intron
TGATCCTGCCTCCCTGCTGG+AGG 0.609884 2:-15002904 MsG0280007407.01.T01:five_prime_UTR
TTGAGATCATAGTCTCTACA+AGG 0.611209 2:+15003715 None:intergenic
TTCAGCTTCGAATAATCACT+CGG 0.613649 2:-15004746 MsG0280007407.01.T01:five_prime_UTR
GATGGGACTGAGAGTTGCAA+AGG 0.617350 2:+15000075 None:intergenic
TTGAATTTATTATGCTACAA+CGG 0.618225 2:+15002811 None:intergenic
TCCTCCGATACCTGAAAGTG+AGG 0.618435 2:-15001056 MsG0280007407.01.T01:five_prime_UTR
CCAGCTGAAGTTCAAGTCCA+AGG 0.619323 2:+15003659 None:intergenic
ATTTATGTACAGATAATACA+AGG 0.622911 2:-14997786 MsG0280007407.01.T01:three_prime_UTR
CTACTGAAAGAGAAGAAGAG+AGG 0.624913 2:-14998851 MsG0280007407.01.T01:CDS
CTCGGGTGAAAATATAACAT+GGG 0.628746 2:+15001841 None:intergenic
TCTTCTGAGAGCATACCTGA+TGG 0.634506 2:-14997880 MsG0280007407.01.T01:three_prime_UTR
GGACAAGGAGCAACTTGCGA+CGG 0.640127 2:+15003736 None:intergenic
AATCACTCGGCAACTCTGAG+AGG 0.641630 2:-15004733 MsG0280007407.01.T01:intron
AAAGGCCTTTCTCAAAGTGG+AGG 0.647344 2:-14998530 MsG0280007407.01.T01:CDS
GAAAATTAAAGGTTCGCCTG+AGG 0.656031 2:+15001212 None:intergenic
GAACTGATAAAGCAGTACCT+TGG 0.658471 2:-15003676 MsG0280007407.01.T01:five_prime_UTR
ATGTCACAACCAGTGGCCGA+GGG 0.659444 2:-14999989 MsG0280007407.01.T01:five_prime_UTR
GTGTTGCAGAGATATTGCAA+CGG 0.661225 2:-14999151 MsG0280007407.01.T01:intron
TCATAGTCTCTACAAGGACA+AGG 0.665899 2:+15003721 None:intergenic
AAGAAGCCATTACCTCAACA+TGG 0.671130 2:+14998102 None:intergenic
AGGAGACATGTCACAACCAG+TGG 0.673132 2:-14999996 MsG0280007407.01.T01:five_prime_UTR
CGTCTCAACACTCATCCTGG+AGG 0.701858 2:-15003423 MsG0280007407.01.T01:five_prime_UTR
GGCACATAAGCGCATCAAAG+GGG 0.706430 2:+14999038 None:intergenic
TGTGCTTAATAACTTCTCTG+AGG 0.713844 2:-15004498 MsG0280007407.01.T01:intron
AGTTGCACTAATGAAGAATG+TGG 0.715148 2:-15001184 MsG0280007407.01.T01:five_prime_UTR
ATGTAATATCCAAAACACGA+CGG 0.738563 2:+15002724 None:intergenic
TATGTGACACAACAGTAGTG+GGG 0.739031 2:+15001546 None:intergenic
GATGATGCTAGTCTTACACG+GGG 0.805150 2:-14997683 MsG0280007407.01.T01:three_prime_UTR
CTAACGAAAAGGAAGCACAG+TGG 0.809974 2:-15005139 MsG0280007407.01.T01:five_prime_UTR
GTTGCAGAGATATTGCAACG+GGG 0.857538 2:-14999149 MsG0280007407.01.T01:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GATTGTTAAATTATAAATTA+TGG + Chr2:15003822-15003841 None:intergenic 10.0%
!! TATTGACATAAAAAATAAAA+TGG + Chr2:15004306-15004325 None:intergenic 10.0%
!!! ACAAATAAATATTGATTAAA+AGG + Chr2:15001628-15001647 None:intergenic 10.0%
!!! CAAATAAATATTGATTAAAA+GGG + Chr2:15001627-15001646 None:intergenic 10.0%
!!! TAATTTTATTAATCTTTTCT+TGG - Chr2:15002210-15002229 MsG0280007407.01.T01:five_prime_UTR 10.0%
!!! TATTTTTTCAATTAAGATAA+CGG - Chr2:14998583-14998602 MsG0280007407.01.T01:intron 10.0%
!! AATTATAAGCATATTTGATT+GGG - Chr2:15000227-15000246 MsG0280007407.01.T01:intron 15.0%
!! ATGTAATGAAAAGTTATAAA+TGG - Chr2:15001748-15001767 MsG0280007407.01.T01:five_prime_UTR 15.0%
!! GAATAAAGAAGAAAAAAAAA+AGG + Chr2:15001928-15001947 None:intergenic 15.0%
!! TAAAACATTAAAGAGAAAAT+CGG - Chr2:15000253-15000272 MsG0280007407.01.T01:intron 15.0%
!! TAATTATAAGCATATTTGAT+TGG - Chr2:15000226-15000245 MsG0280007407.01.T01:intron 15.0%
!! TTGTATTAATAATTTCCATA+TGG - Chr2:15004442-15004461 MsG0280007407.01.T01:intron 15.0%
!!! ACATTTATACTTTTATTTGA+AGG + Chr2:14999578-14999597 None:intergenic 15.0%
!!! ATTTTTTCAATTAAGATAAC+GGG - Chr2:14998584-14998603 MsG0280007407.01.T01:intron 15.0%
!!! GAAATGAAATTTATTTTTCA+TGG - Chr2:15002134-15002153 MsG0280007407.01.T01:five_prime_UTR 15.0%
!!! TATAATTATTTGAAATGCTT+TGG + Chr2:15000214-15000233 None:intergenic 15.0%
!!! TCAAATTTTTATTTGTTTGT+TGG - Chr2:15001212-15001231 MsG0280007407.01.T01:five_prime_UTR 15.0%
!!! TTTTACATATATCAATTTCA+AGG - Chr2:15001370-15001389 MsG0280007407.01.T01:five_prime_UTR 15.0%
!! AAAACATTAAAGAGAAAATC+GGG - Chr2:15000254-15000273 MsG0280007407.01.T01:intron 20.0%
!! AAAATACTTACAGAAATATG+TGG + Chr2:15002079-15002098 None:intergenic 20.0%
!! AAACAAAAAAGTAAACTAAG+TGG + Chr2:15003261-15003280 None:intergenic 20.0%
!! AAGAATTAGATGAATTGAAT+TGG + Chr2:14997810-14997829 None:intergenic 20.0%
!! AATTATGAAAATCAGATCTA+AGG + Chr2:15001969-15001988 None:intergenic 20.0%
!! ACATTATTTGTCATCATTAA+TGG + Chr2:15003488-15003507 None:intergenic 20.0%
!! ATAAATTCAATATCTTGTGT+AGG - Chr2:14999930-14999949 MsG0280007407.01.T01:CDS 20.0%
!! ATTTAACAATCTGAAAACTT+TGG - Chr2:15003831-15003850 MsG0280007407.01.T01:intron 20.0%
!! ATTTATGTACAGATAATACA+AGG - Chr2:15004942-15004961 MsG0280007407.01.T01:intron 20.0%
!! CAAAAATACAAATAGAACAA+TGG - Chr2:15000688-15000707 MsG0280007407.01.T01:five_prime_UTR 20.0%
!! CAATTGTAATTTGAACAAAA+TGG - Chr2:15004102-15004121 MsG0280007407.01.T01:intron 20.0%
!! GTAACTTGAAAAATCATATT+TGG - Chr2:15000774-15000793 MsG0280007407.01.T01:intron 20.0%
!! TAATGAAAAGTTATAAATGG+TGG - Chr2:15001751-15001770 MsG0280007407.01.T01:five_prime_UTR 20.0%
!! TCAATATTTATTTGTTTCAC+AGG - Chr2:15001633-15001652 MsG0280007407.01.T01:five_prime_UTR 20.0%
!! TCCAAAATCTCTTAATAATA+TGG + Chr2:15000430-15000449 None:intergenic 20.0%
!! TTAATATGATGTAGCTTAAT+TGG + Chr2:14998823-14998842 None:intergenic 20.0%
!! TTAATTCTATTATTTCGTCA+TGG - Chr2:15001800-15001819 MsG0280007407.01.T01:five_prime_UTR 20.0%
!! TTATGAACTGTTTACATATA+TGG + Chr2:14997682-14997701 None:intergenic 20.0%
!! TTGAATTTATTATGCTACAA+CGG + Chr2:14999920-14999939 None:intergenic 20.0%
!! TTTGATTCTGTTATTATTGT+TGG - Chr2:14998291-14998310 MsG0280007407.01.T01:intron 20.0%
!!! AACAAAATTTTGAGATTAAG+CGG + Chr2:14998759-14998778 None:intergenic 20.0%
!!! AACTTTTCAAACAAAACATA+TGG + Chr2:14999397-14999416 None:intergenic 20.0%
!!! ACCATATTATTAAGAGATTT+TGG - Chr2:15000426-15000445 MsG0280007407.01.T01:intron 20.0%
!!! AGAAAAAACATATTTTGTCA+AGG + Chr2:15002552-15002571 None:intergenic 20.0%
!!! ATATGATTTTTCAAGTTACA+TGG + Chr2:15000773-15000792 None:intergenic 20.0%
!!! CTTAATCTCAAAATTTTGTT+TGG - Chr2:14998759-14998778 MsG0280007407.01.T01:intron 20.0%
!!! GCATTTTATAGAATGAAAAA+TGG - Chr2:15003378-15003397 MsG0280007407.01.T01:five_prime_UTR 20.0%
!!! GCTTTTAATTGTTTATTTGT+TGG - Chr2:14998123-14998142 MsG0280007407.01.T01:CDS 20.0%
!!! GGTTTCATTTTTTAAATTCT+TGG - Chr2:15002315-15002334 MsG0280007407.01.T01:five_prime_UTR 20.0%
!!! TAAGTATTTTTACCAATTTG+TGG - Chr2:15002089-15002108 MsG0280007407.01.T01:five_prime_UTR 20.0%
!!! TATCAACAATTAAAAGTACA+AGG + Chr2:15004922-15004941 None:intergenic 20.0%
!!! TATTTTCATACATACACTTA+TGG + Chr2:14998912-14998931 None:intergenic 20.0%
!!! TTGTTTGTTGTATCATTATT+TGG + Chr2:14997563-14997582 None:intergenic 20.0%
!!! TTTAATTTTGCTTCAGTATA+GGG + Chr2:15003353-15003372 None:intergenic 20.0%
!!! TTTATTTTTCATGGAATTTG+CGG - Chr2:15002143-15002162 MsG0280007407.01.T01:five_prime_UTR 20.0%
!!! TTTTAATTTTGCTTCAGTAT+AGG + Chr2:15003354-15003373 None:intergenic 20.0%
!!! TTTTTTCAATTAAGATAACG+GGG - Chr2:14998585-14998604 MsG0280007407.01.T01:intron 20.0%
! AAAAATTTCATGACTTTCTC+GGG + Chr2:15000907-15000926 None:intergenic 25.0%
! AAAGGAAATTAAGCAAAAAG+TGG + Chr2:15001910-15001929 None:intergenic 25.0%
! AAGATAATAACCCCTAATAT+AGG + Chr2:15004008-15004027 None:intergenic 25.0%
! AATAGCAATAAGGTTGTTTA+CGG + Chr2:15004742-15004761 None:intergenic 25.0%
! AATTCCATTGGTAAGTTATA+TGG - Chr2:15002889-15002908 MsG0280007407.01.T01:five_prime_UTR 25.0%
! AATTGTGAGTTATTTGTGAT+AGG + Chr2:15004087-15004106 None:intergenic 25.0%
! ACTGAACTTGATTATATACA+TGG - Chr2:15000064-15000083 MsG0280007407.01.T01:five_prime_UTR 25.0%
! AGATGGTTGAAAGAATAAAT+TGG - Chr2:15004157-15004176 MsG0280007407.01.T01:intron 25.0%
! ATAAAAGGAAGATAAGACAA+GGG - Chr2:14999641-14999660 MsG0280007407.01.T01:intron 25.0%
! ATAAAATGGTGAACATACTT+AGG + Chr2:15004292-15004311 None:intergenic 25.0%
! ATATAACTTACCAATGGAAT+TGG + Chr2:15002890-15002909 None:intergenic 25.0%
! ATCAAAGAGAATTCATAAAC+TGG + Chr2:14999285-14999304 None:intergenic 25.0%
! ATGTATTGAAACAGTTTACA+AGG + Chr2:15002931-15002950 None:intergenic 25.0%
! ATTAACCAATATAGAGAAGT+TGG + Chr2:15003076-15003095 None:intergenic 25.0%
! ATTATATACATGGCTAAATC+TGG - Chr2:15000074-15000093 MsG0280007407.01.T01:five_prime_UTR 25.0%
! ATTGAAAAGATTAGGATCAT+AGG - Chr2:15001296-15001315 MsG0280007407.01.T01:five_prime_UTR 25.0%
! CAAAAATTTCATGACTTTCT+CGG + Chr2:15000908-15000927 None:intergenic 25.0%
! CCAAACAAAAACAAATTTGA+TGG + Chr2:15000101-15000120 None:intergenic 25.0%
! CTCTATTACTAGAGAAAATT+AGG + Chr2:15003179-15003198 None:intergenic 25.0%
! CTTAAATAGTTTGACAAGTA+TGG - Chr2:15000312-15000331 MsG0280007407.01.T01:intron 25.0%
! GAGAAAAATTATTACCAAAC+AGG - Chr2:14998696-14998715 MsG0280007407.01.T01:intron 25.0%
! GATTGAAATTCAAATTTGGT+TGG - Chr2:15005186-15005205 MsG0280007407.01.T01:five_prime_UTR 25.0%
! GCAACTTCAATGAAAATTAA+AGG + Chr2:15001530-15001549 None:intergenic 25.0%
! GTGTGATTGAAATTCAAATT+TGG - Chr2:15005182-15005201 MsG0280007407.01.T01:five_prime_UTR 25.0%
! TAAAAGAAAAACTTAGTACG+TGG - Chr2:14999761-14999780 MsG0280007407.01.T01:intron 25.0%
! TAAGTTCAAAAATAGTCAGT+TGG - Chr2:15003023-15003042 MsG0280007407.01.T01:intron 25.0%
! TATATTAGGGGTTATTATCT+TGG - Chr2:15004007-15004026 MsG0280007407.01.T01:intron 25.0%
! TATCTATCTCTTCAAAAGAA+TGG + Chr2:15001097-15001116 None:intergenic 25.0%
! TCAAATAAGAAATTTGATCG+CGG + Chr2:14998276-14998295 None:intergenic 25.0%
! TCATAGATCAGACATTAAAT+AGG - Chr2:15000941-15000960 MsG0280007407.01.T01:intron 25.0%
! TCTATAGTGAACTTGTATAT+AGG + Chr2:14998795-14998814 None:intergenic 25.0%
! TGAAAATAACATGGAAGTTT+AGG + Chr2:15005023-15005042 None:intergenic 25.0%
! TGAGAGTAATGAAATATGAT+TGG + Chr2:15000748-15000767 None:intergenic 25.0%
! TTGAGATATAAATGTCTTGT+TGG + Chr2:15002429-15002448 None:intergenic 25.0%
!! AAGCATTCAGACATTTTTAT+GGG + Chr2:15000973-15000992 None:intergenic 25.0%
!! ATATTCTTTTCCAATTCCAT+TGG - Chr2:15002877-15002896 MsG0280007407.01.T01:five_prime_UTR 25.0%
!! ATCTATTTAGTTGACTCATT+TGG - Chr2:15000513-15000532 MsG0280007407.01.T01:intron 25.0%
!! CATTTTCATTTTCAATGCTT+TGG - Chr2:14998047-14998066 MsG0280007407.01.T01:intron 25.0%
!! GGAAAAATGAATCTCATTTT+TGG + Chr2:15003137-15003156 None:intergenic 25.0%
!! TAAGAGATTTTGGATTTTGA+TGG - Chr2:15000436-15000455 MsG0280007407.01.T01:intron 25.0%
!! TAAGCATTCAGACATTTTTA+TGG + Chr2:15000974-15000993 None:intergenic 25.0%
!! TGAAATTAGTTTCACATGAA+AGG + Chr2:15001034-15001053 None:intergenic 25.0%
!! TTAATTTTGCTTCAGTATAG+GGG + Chr2:15003352-15003371 None:intergenic 25.0%
!! TTAGTAGATTTTCACATGAA+AGG + Chr2:15001063-15001082 None:intergenic 25.0%
!! TTTTGAACTTAAGCATGATA+AGG + Chr2:15003014-15003033 None:intergenic 25.0%
!!! AAAATGAATCTCATTTTTGG+TGG + Chr2:15003134-15003153 None:intergenic 25.0%
!!! AAAGTTTTTCAGAGTACAAT+AGG - Chr2:15002282-15002301 MsG0280007407.01.T01:five_prime_UTR 25.0%
!!! AGTACTTTTTTTTGGTGTTA+TGG - Chr2:14998400-14998419 MsG0280007407.01.T01:intron 25.0%
!!! ATTAAAAGGGTACTGAAAAA+GGG + Chr2:15001614-15001633 None:intergenic 25.0%
!!! ATTGTTTTGATAAAACCATC+AGG + Chr2:15004866-15004885 None:intergenic 25.0%
!!! ATTTTTTAAATTCTTGGCCT+TGG - Chr2:15002321-15002340 MsG0280007407.01.T01:five_prime_UTR 25.0%
!!! CCATCAAATTTGTTTTTGTT+TGG - Chr2:15000098-15000117 MsG0280007407.01.T01:intron 25.0%
!!! TGATGGTTTTATCAAAACAA+TGG - Chr2:15004865-15004884 MsG0280007407.01.T01:intron 25.0%
!!! TTTTTCAATTAAGATAACGG+GGG - Chr2:14998586-14998605 MsG0280007407.01.T01:intron 25.0%
!!! TTTTTTTTTTAATCCCTCTC+TGG - Chr2:15001875-15001894 MsG0280007407.01.T01:five_prime_UTR 25.0%
AAAAGAGGACTAGAAGTAAA+AGG - Chr2:15002390-15002409 MsG0280007407.01.T01:five_prime_UTR 30.0%
AAACAATATGTGGCTTACTT+AGG + Chr2:15002827-15002846 None:intergenic 30.0%
AACAGTTTCTGTCCTATATT+AGG - Chr2:15003993-15004012 MsG0280007407.01.T01:intron 30.0%
AAGTATGTTCTCATAGAATG+TGG + Chr2:15002773-15002792 None:intergenic 30.0%
ACAGTTTCTGTCCTATATTA+GGG - Chr2:15003994-15004013 MsG0280007407.01.T01:intron 30.0%
ACATAAGCTGGTAATAATGT+AGG - Chr2:14998944-14998963 MsG0280007407.01.T01:intron 30.0%
ACATATCTAATCCAATTCGT+TGG - Chr2:15004974-15004993 MsG0280007407.01.T01:five_prime_UTR 30.0%
ACCTTCTCTTAAGATCTAAA+AGG + Chr2:14999974-14999993 None:intergenic 30.0%
AGACTCATAATATTGAATCC+AGG + Chr2:15000649-15000668 None:intergenic 30.0%
AGATCAGACATTAAATAGGT+GGG - Chr2:15000945-15000964 MsG0280007407.01.T01:intron 30.0%
AGATCTAAAAGGTTGCTTAT+AGG + Chr2:14999963-14999982 None:intergenic 30.0%
AGCATTTATTGTGGAAAAGA+AGG - Chr2:15000278-15000297 MsG0280007407.01.T01:intron 30.0%
AGCGTATCATTGAAAAGATT+AGG - Chr2:15001288-15001307 MsG0280007407.01.T01:five_prime_UTR 30.0%
ATCAAAGTCGAACAACTATT+GGG + Chr2:15002517-15002536 None:intergenic 30.0%
ATCACAATATCACATTGTAC+TGG + Chr2:15005120-15005139 None:intergenic 30.0%
ATCCTTATTATTGCTTCTGT+GGG + Chr2:15000344-15000363 None:intergenic 30.0%
ATGTAATATCCAAAACACGA+CGG + Chr2:15000007-15000026 None:intergenic 30.0%
ATTCCTACGGAAAAGATAAA+AGG - Chr2:14999626-14999645 MsG0280007407.01.T01:intron 30.0%
CAAAGATGAGAATGTTAAGA+TGG + Chr2:15003236-15003255 None:intergenic 30.0%
CAACATGATATGGAAATTCA+AGG + Chr2:14999888-14999907 None:intergenic 30.0%
CAATTTCCAATGATAGATTC+AGG + Chr2:15003955-15003974 None:intergenic 30.0%
CATAAGCTGGTAATAATGTA+GGG - Chr2:14998945-14998964 MsG0280007407.01.T01:intron 30.0%
CCACAAGATAAAACAATATG+TGG + Chr2:15002837-15002856 None:intergenic 30.0%
CTATTGGGAATAAACATACT+AGG + Chr2:15002502-15002521 None:intergenic 30.0%
CTTATTCAAAGCAATCCATA+TGG + Chr2:15004460-15004479 None:intergenic 30.0%
CTTCTTTCTTTCTCCTTTAA+TGG - Chr2:15003310-15003329 MsG0280007407.01.T01:intron 30.0%
GAATGCTTATGAAGAGAAAA+AGG - Chr2:15000985-15001004 MsG0280007407.01.T01:intron 30.0%
GAGATCAATGAACAAAGTAT+TGG - Chr2:15005208-15005227 MsG0280007407.01.T01:five_prime_UTR 30.0%
GATAAAAGGAAGATAAGACA+AGG - Chr2:14999640-14999659 MsG0280007407.01.T01:intron 30.0%
GATCTAAAAGGTTGCTTATA+GGG + Chr2:14999962-14999981 None:intergenic 30.0%
GGTCTCTAAATATCTCTTAA+TGG - Chr2:15003044-15003063 MsG0280007407.01.T01:intron 30.0%
GGTTGAAAGAATAAATTGGA+TGG - Chr2:15004161-15004180 MsG0280007407.01.T01:intron 30.0%
GTATTTGATTACATAACGCA+AGG - Chr2:14998313-14998332 MsG0280007407.01.T01:intron 30.0%
GTCCATTAGTTAGAGATAAA+AGG - Chr2:15000384-15000403 MsG0280007407.01.T01:intron 30.0%
GTGATGAATACATAACAGAA+CGG - Chr2:14997908-14997927 MsG0280007407.01.T01:exon 30.0%
TAATATAGGACAGAAACTGT+TGG + Chr2:15003994-15004013 None:intergenic 30.0%
TAGAACTACACCAAATTACA+TGG - Chr2:14999800-14999819 MsG0280007407.01.T01:intron 30.0%
TAGATCAGACATTAAATAGG+TGG - Chr2:15000944-15000963 MsG0280007407.01.T01:intron 30.0%
TATCAAACGTGTTGTAAAAC+TGG - Chr2:15002039-15002058 MsG0280007407.01.T01:five_prime_UTR 30.0%
TATTACCAAACAGGTCTATT+TGG - Chr2:14998705-14998724 MsG0280007407.01.T01:intron 30.0%
TCATGGTGAACTATGTATAT+AGG - Chr2:15004223-15004242 MsG0280007407.01.T01:intron 30.0%
TGAAAATCTACTAACTTGAG+AGG - Chr2:15001069-15001088 MsG0280007407.01.T01:five_prime_UTR 30.0%
TGGAAAAGAATATCCAAGAA+TGG + Chr2:15002870-15002889 None:intergenic 30.0%
TGGAAATTCAAGGAGATTAA+AGG + Chr2:14999878-14999897 None:intergenic 30.0%
TTACTTCTACAACCTACAAA+TGG - Chr2:15003633-15003652 MsG0280007407.01.T01:intron 30.0%
TTAGAGATAAAAGGAGAAAG+AGG - Chr2:15000393-15000412 MsG0280007407.01.T01:intron 30.0%
TTAGATCTTAAGAGAAGGTT+GGG - Chr2:14999975-14999994 MsG0280007407.01.T01:five_prime_UTR 30.0%
TTATATCTGATAACTGACAG+TGG - Chr2:14998463-14998482 MsG0280007407.01.T01:intron 30.0%
TTATTACCAGCTTATGTGTT+AGG + Chr2:14998941-14998960 None:intergenic 30.0%
TTGAACCAACTTCTCTATAT+TGG - Chr2:15003068-15003087 MsG0280007407.01.T01:intron 30.0%
TTTAATGCTGACGAAATTTC+CGG + Chr2:15003668-15003687 None:intergenic 30.0%
TTTAGATCTTAAGAGAAGGT+TGG - Chr2:14999974-14999993 MsG0280007407.01.T01:five_prime_UTR 30.0%
! AAAGTCATGAAATTTTTGCG+TGG - Chr2:15000910-15000929 MsG0280007407.01.T01:intron 30.0%
! AAGTTCAGTAACAAAGTGTT+GGG + Chr2:15000053-15000072 None:intergenic 30.0%
! ACCTTTTAGATCTTAAGAGA+AGG - Chr2:14999970-14999989 MsG0280007407.01.T01:exon 30.0%
! CTCCTTTTATCTCTAACTAA+TGG + Chr2:15000389-15000408 None:intergenic 30.0%
! GCAAATTTTCACTTGCAAAA+TGG - Chr2:15003919-15003938 MsG0280007407.01.T01:intron 30.0%
! GTTGCTACTTCAAAATTTAG+TGG - Chr2:14999482-14999501 MsG0280007407.01.T01:intron 30.0%
! TAATTTTGCTTCAGTATAGG+GGG + Chr2:15003351-15003370 None:intergenic 30.0%
! TGGAAGATTTTATGCTTCAA+AGG - Chr2:15004056-15004075 MsG0280007407.01.T01:intron 30.0%
! TTTTATTATTTGTCGCTGTG+TGG + Chr2:15004819-15004838 None:intergenic 30.0%
!! ATTTTTGTCACTTGCTTACT+TGG + Chr2:15000675-15000694 None:intergenic 30.0%
!! CCACATATTGTTTTATCTTG+TGG - Chr2:15002834-15002853 MsG0280007407.01.T01:five_prime_UTR 30.0%
!! CTTTGGAATTGGAATTTGTA+TGG - Chr2:14998064-14998083 MsG0280007407.01.T01:intron 30.0%
!! GATTAAAAGGGTACTGAAAA+AGG + Chr2:15001615-15001634 None:intergenic 30.0%
!! TACAGTTGATGAAATTCCTA+CGG - Chr2:14999613-14999632 MsG0280007407.01.T01:intron 30.0%
!! TGTAATTTGGTGTAGTTCTA+AGG + Chr2:14999800-14999819 None:intergenic 30.0%
!!! AAGTTCTGGAACTTAGTTTT+TGG - Chr2:15004261-15004280 MsG0280007407.01.T01:intron 30.0%
!!! AGTGCTTTTATTTTGCGATT+AGG - Chr2:15001252-15001271 MsG0280007407.01.T01:five_prime_UTR 30.0%
!!! CATTTTCAATGCTTTGGAAT+TGG - Chr2:14998053-14998072 MsG0280007407.01.T01:intron 30.0%
!!! GACTCTAGAGTACTTTTTTT+TGG - Chr2:14998392-14998411 MsG0280007407.01.T01:intron 30.0%
!!! TGGTTTTATGTTACCATTCT+TGG - Chr2:15002854-15002873 MsG0280007407.01.T01:five_prime_UTR 30.0%
AAATCGGGTAGCATTTATTG+TGG - Chr2:15000269-15000288 MsG0280007407.01.T01:intron 35.0%
AACAATCCTCACTAACGAAA+AGG - Chr2:14997578-14997597 MsG0280007407.01.T01:three_prime_UTR 35.0%
AAGCAACATTGAGAAAAACG+TGG - Chr2:14997512-14997531 MsG0280007407.01.T01:three_prime_UTR 35.0%
AATCACACACTCTTCATTGA+GGG + Chr2:15005170-15005189 None:intergenic 35.0%
AATCATGCTCTTGAAAGTTC+TGG - Chr2:15004247-15004266 MsG0280007407.01.T01:intron 35.0%
ACAGAAGTTCTGTGATTGTT+TGG + Chr2:15001419-15001438 None:intergenic 35.0%
ACCTCCATATAACTTACCAA+TGG + Chr2:15002896-15002915 None:intergenic 35.0%
ACTATGTGGACATATCATCA+TGG - Chr2:15002977-15002996 MsG0280007407.01.T01:five_prime_UTR 35.0%
AGAAAACAAGCCTTCTTCTT+TGG + Chr2:14999221-14999240 None:intergenic 35.0%
AGCATGATAAGGAATCATAG+TGG + Chr2:15003003-15003022 None:intergenic 35.0%
AGCTTATCAAAAAACGCTAC+AGG - Chr2:14998652-14998671 MsG0280007407.01.T01:intron 35.0%
AGGTCTACACACAAATTGAT+CGG + Chr2:15002636-15002655 None:intergenic 35.0%
AGTACAATAGGACAACTTTC+TGG - Chr2:15002294-15002313 MsG0280007407.01.T01:five_prime_UTR 35.0%
AGTTGCACTAATGAAGAATG+TGG - Chr2:15001544-15001563 MsG0280007407.01.T01:five_prime_UTR 35.0%
ATATTACATCCAGCAATTCC+TGG - Chr2:15000018-15000037 MsG0280007407.01.T01:five_prime_UTR 35.0%
ATCCTATTTCACCAACGAAT+TGG + Chr2:15004988-15005007 None:intergenic 35.0%
ATGATGATATGTCCACATAG+TGG + Chr2:15002978-15002997 None:intergenic 35.0%
ATTCAATATCTTGTGTAGGC+TGG - Chr2:14999934-14999953 MsG0280007407.01.T01:CDS 35.0%
ATTGAATACAGTTAGAGGAG+AGG + Chr2:14997774-14997793 None:intergenic 35.0%
CAAGGATTAGGTAGTTTGAA+TGG - Chr2:14998331-14998350 MsG0280007407.01.T01:intron 35.0%
CAAGTTCAGTAACAAAGTGT+TGG + Chr2:15000054-15000073 None:intergenic 35.0%
CACAGAAGCAATAATAAGGA+TGG - Chr2:15000343-15000362 MsG0280007407.01.T01:intron 35.0%
CACTTCTTGCTTCTCAATAT+GGG - Chr2:15004132-15004151 MsG0280007407.01.T01:intron 35.0%
CAGAAGTTCTGTGATTGTTT+GGG + Chr2:15001418-15001437 None:intergenic 35.0%
CAGTTTCTGTCCTATATTAG+GGG - Chr2:15003995-15004014 MsG0280007407.01.T01:intron 35.0%
CATCAAAGTCGAACAACTAT+TGG + Chr2:15002518-15002537 None:intergenic 35.0%
CATCATCGGTGAAAATAACA+TGG + Chr2:15005032-15005051 None:intergenic 35.0%
CATCCTTATTATTGCTTCTG+TGG + Chr2:15000345-15000364 None:intergenic 35.0%
CATTACATGTTTGCAATACC+TGG + Chr2:15003714-15003733 None:intergenic 35.0%
CCAATTGTGTTCACCATTAA+AGG + Chr2:15003326-15003345 None:intergenic 35.0%
CCTTTAATGGTGAACACAAT+TGG - Chr2:15003323-15003342 MsG0280007407.01.T01:intron 35.0%
CTACTCTATATCATCAACTC+AGG - Chr2:15001711-15001730 MsG0280007407.01.T01:five_prime_UTR 35.0%
CTCGGGTGAAAATATAACAT+GGG + Chr2:15000890-15000909 None:intergenic 35.0%
CTTCTTTCTGCATACTAAAG+TGG - Chr2:15004036-15004055 MsG0280007407.01.T01:intron 35.0%
GAAGACTAAGCAACATGATA+TGG + Chr2:14999898-14999917 None:intergenic 35.0%
GAATTCATAAACTGGCTGAA+TGG + Chr2:14999277-14999296 None:intergenic 35.0%
GACTAGAAGTAAAAGGAACA+TGG - Chr2:15002397-15002416 MsG0280007407.01.T01:five_prime_UTR 35.0%
GAGAGATTGAATACAGTTAG+AGG + Chr2:14997779-14997798 None:intergenic 35.0%
GATTACATAACGCAAGGATT+AGG - Chr2:14998319-14998338 MsG0280007407.01.T01:intron 35.0%
GGGTATATAGGAAAAAAGCT+AGG - Chr2:15005065-15005084 MsG0280007407.01.T01:five_prime_UTR 35.0%
GTATGTCCTGAATCTATCAT+TGG - Chr2:15003946-15003965 MsG0280007407.01.T01:intron 35.0%
TATGACCAAATAGACCTGTT+TGG + Chr2:14998713-14998732 None:intergenic 35.0%
TATGATCCTAACACATAAGC+TGG - Chr2:14998932-14998951 MsG0280007407.01.T01:intron 35.0%
TCACTTCTTGCTTCTCAATA+TGG - Chr2:15004131-15004150 MsG0280007407.01.T01:intron 35.0%
TCATAAGTGTCTTCTTCATC+AGG + Chr2:15002799-15002818 None:intergenic 35.0%
TCCATTGGTAAGTTATATGG+AGG - Chr2:15002892-15002911 MsG0280007407.01.T01:five_prime_UTR 35.0%
TCCCAAGTTAGAACTTAGAA+GGG + Chr2:15001155-15001174 None:intergenic 35.0%
TCTCGGGTGAAAATATAACA+TGG + Chr2:15000891-15000910 None:intergenic 35.0%
TGATGATATGTCCACATAGT+GGG + Chr2:15002977-15002996 None:intergenic 35.0%
TGGGACAAAGAAAAATCACT+CGG + Chr2:15001399-15001418 None:intergenic 35.0%
TGTGCTTAATAACTTCTCTG+AGG - Chr2:14998230-14998249 MsG0280007407.01.T01:intron 35.0%
TTCAGCTTCGAATAATCACT+CGG - Chr2:14997982-14998001 MsG0280007407.01.T01:intron 35.0%
TTGAATACAGTTAGAGGAGA+GGG + Chr2:14997773-14997792 None:intergenic 35.0%
TTGAGATCATAGTCTCTACA+AGG + Chr2:14999016-14999035 None:intergenic 35.0%
TTTGACCCAATGAATTTCAG+TGG - Chr2:15000837-15000856 MsG0280007407.01.T01:intron 35.0%
TTTGTCATCATTAATGGCCA+AGG + Chr2:15003482-15003501 None:intergenic 35.0%
! AACCCTTCTAAGTTCTAACT+TGG - Chr2:15001150-15001169 MsG0280007407.01.T01:intron 35.0%
! ACCCTTCTAAGTTCTAACTT+GGG - Chr2:15001151-15001170 MsG0280007407.01.T01:intron 35.0%
! AGAGAAGCACAAGACAAAAT+AGG + Chr2:15003210-15003229 None:intergenic 35.0%
! ATCCAATTCGTTGGTGAAAT+AGG - Chr2:15004983-15005002 MsG0280007407.01.T01:five_prime_UTR 35.0%
! ATTAGGCAGCTACCATTTTA+AGG + Chr2:15003162-15003181 None:intergenic 35.0%
! ATTCGTTGGTGAAATAGGAT+AGG - Chr2:15004988-15005007 MsG0280007407.01.T01:five_prime_UTR 35.0%
! CACAAAATTTTCACATGTCC+TGG - Chr2:15001119-15001138 MsG0280007407.01.T01:intron 35.0%
! CTACAAATGGATTCATTCAC+CGG - Chr2:15003646-15003665 MsG0280007407.01.T01:intron 35.0%
! CTTCCTTTTATCTTTTCCGT+AGG + Chr2:14999632-14999651 None:intergenic 35.0%
! GTTTGGTTTCTCTTCAAGTT+AGG - Chr2:15000115-15000134 MsG0280007407.01.T01:intron 35.0%
! TATTGCTTCTTTGAGAGCAT+TGG - Chr2:14999729-14999748 MsG0280007407.01.T01:intron 35.0%
! TCTTGTTTCCATCATTCTAG+AGG - Chr2:15002456-15002475 MsG0280007407.01.T01:five_prime_UTR 35.0%
! TTAGGCAGCTACCATTTTAA+GGG + Chr2:15003161-15003180 None:intergenic 35.0%
! TTGACTCATTTGGTGAGAAA+AGG - Chr2:15000523-15000542 MsG0280007407.01.T01:intron 35.0%
! TTGTTACTCTACCCATTTTC+TGG - Chr2:15004372-15004391 MsG0280007407.01.T01:intron 35.0%
! TTGTTTCACAGGAAGTTTTG+TGG - Chr2:15001644-15001663 MsG0280007407.01.T01:five_prime_UTR 35.0%
! TTTTCACTTGCAAAATGGAG+CGG - Chr2:15003924-15003943 MsG0280007407.01.T01:intron 35.0%
!! AGAACAATGGTTAGCTTACA+TGG - Chr2:15000701-15000720 MsG0280007407.01.T01:five_prime_UTR 35.0%
!! ATATCACATTGTACTGGTTG+CGG + Chr2:15005114-15005133 None:intergenic 35.0%
!! ATTCTGAAAATTTTCCAGCC+AGG - Chr2:15001986-15002005 MsG0280007407.01.T01:five_prime_UTR 35.0%
!! CCTTTTAACTAACATCTCAG+CGG - Chr2:15000611-15000630 MsG0280007407.01.T01:intron 35.0%
!! CTTGTCATTTCATGCTTTTG+TGG - Chr2:15004415-15004434 MsG0280007407.01.T01:intron 35.0%
!! CTTTTAACTAACATCTCAGC+GGG - Chr2:15000612-15000631 MsG0280007407.01.T01:intron 35.0%
!! TCATTTTTCCCCCCTTAAAA+TGG - Chr2:15003147-15003166 MsG0280007407.01.T01:intron 35.0%
!! TGTTTCACAGGAAGTTTTGT+GGG - Chr2:15001645-15001664 MsG0280007407.01.T01:five_prime_UTR 35.0%
!! TTTCTACTCCTCTAGAATGA+TGG + Chr2:15002467-15002486 None:intergenic 35.0%
AAGAAGCCATTACCTCAACA+TGG + Chr2:15004629-15004648 None:intergenic 40.0%
AAGACTTGAGAGAGGTAAGA+AGG + Chr2:15004773-15004792 None:intergenic 40.0%
AAGGATGGTAGACTAGATAG+AGG - Chr2:15000358-15000377 MsG0280007407.01.T01:intron 40.0%
ACACTCTTCATTGAGGGATA+GGG + Chr2:15005164-15005183 None:intergenic 40.0%
AGACTTGAGAGAGGTAAGAA+GGG + Chr2:15004772-15004791 None:intergenic 40.0%
AGTATGTGACACAACAGTAG+TGG + Chr2:15001187-15001206 None:intergenic 40.0%
AGTGGCAATAAATTCCAGAG+AGG + Chr2:15001892-15001911 None:intergenic 40.0%
ATCGCATTGAGTGGAATTTG+AGG - Chr2:14999247-14999266 MsG0280007407.01.T01:intron 40.0%
ATGGCAGACCTATCAGAAAA+AGG - Chr2:15004180-15004199 MsG0280007407.01.T01:intron 40.0%
ATTCAGAGAGCTCCACAAAT+TGG + Chr2:15002104-15002123 None:intergenic 40.0%
CAATCACACACTCTTCATTG+AGG + Chr2:15005171-15005190 None:intergenic 40.0%
CAGGATATTTGCTCGAAGAA+TGG + Chr2:14999344-14999363 None:intergenic 40.0%
CATTCTTCGAGCAAATATCC+TGG - Chr2:14999342-14999361 MsG0280007407.01.T01:intron 40.0%
CCGCTGAGATGTTAGTTAAA+AGG + Chr2:15000614-15000633 None:intergenic 40.0%
CGGTGAATGAATCCATTTGT+AGG + Chr2:15003648-15003667 None:intergenic 40.0%
CTACTGAAAGAGAAGAAGAG+AGG - Chr2:15003877-15003896 MsG0280007407.01.T01:intron 40.0%
CTCCCAAGTTAGAACTTAGA+AGG + Chr2:15001156-15001175 None:intergenic 40.0%
CTCTCTTCTTCTCTTTCAGT+AGG + Chr2:15003879-15003898 None:intergenic 40.0%
CTCTGTTAGGCACAAAATAG+CGG - Chr2:14998423-14998442 MsG0280007407.01.T01:intron 40.0%
CTTAAGAGAAGGTTGGGAAT+TGG - Chr2:14999981-15000000 MsG0280007407.01.T01:five_prime_UTR 40.0%
GAAAAAGGCCTTTCTCAAAG+TGG - Chr2:15004195-15004214 MsG0280007407.01.T01:intron 40.0%
GAAAATTAAAGGTTCGCCTG+AGG + Chr2:15001519-15001538 None:intergenic 40.0%
GAACTGATAAAGCAGTACCT+TGG - Chr2:14999052-14999071 MsG0280007407.01.T01:CDS 40.0%
GAAGAAGAGAGGAAAAGCTT+TGG - Chr2:15003888-15003907 MsG0280007407.01.T01:intron 40.0%
GAAGCTGAATTTCCATCTTC+AGG + Chr2:14997971-14997990 None:intergenic 40.0%
GAATGTGGCTCAAACTATAC+AGG - Chr2:15001559-15001578 MsG0280007407.01.T01:five_prime_UTR 40.0%
GACCCACAGAAGCAATAATA+AGG - Chr2:15000339-15000358 MsG0280007407.01.T01:intron 40.0%
GAGATCCATTCCCACAATAT+TGG + Chr2:15000866-15000885 None:intergenic 40.0%
GATATTGCAACGGGGAAAAA+CGG - Chr2:15003587-15003606 MsG0280007407.01.T01:intron 40.0%
GATGAAGATCACTTGAAGCT+TGG + Chr2:15004605-15004624 None:intergenic 40.0%
GCAGGATCATCCATGTAATT+TGG + Chr2:14999813-14999832 None:intergenic 40.0%
GCTCATTCATACTTCAGCAA+CGG - Chr2:15004573-15004592 MsG0280007407.01.T01:intron 40.0%
GGATATTCCGCGTAAGTTAA+TGG - Chr2:14999363-14999382 MsG0280007407.01.T01:intron 40.0%
GGGCAAAGCTAATAGCAATA+AGG + Chr2:15004752-15004771 None:intergenic 40.0%
GTATGAGTGTGAATGTGCAT+GGG - Chr2:14999102-14999121 MsG0280007407.01.T01:CDS 40.0%
GTATGTGACACAACAGTAGT+GGG + Chr2:15001186-15001205 None:intergenic 40.0%
GTGGCAATAAATTCCAGAGA+GGG + Chr2:15001891-15001910 None:intergenic 40.0%
GTGTTGCAGAGATATTGCAA+CGG - Chr2:15003577-15003596 MsG0280007407.01.T01:intron 40.0%
TATGTGACACAACAGTAGTG+GGG + Chr2:15001185-15001204 None:intergenic 40.0%
TATGTTATCCAGACTGCAGT+AGG + Chr2:15004544-15004563 None:intergenic 40.0%
TCACAGAAATCACCTGAAGA+TGG - Chr2:14997956-14997975 MsG0280007407.01.T01:intron 40.0%
TCATAGTCTCTACAAGGACA+AGG + Chr2:14999010-14999029 None:intergenic 40.0%
TCGGCAATCATAGATACAGA+AGG + Chr2:15002617-15002636 None:intergenic 40.0%
TCTTCTTCTATCGCATTGAG+TGG - Chr2:14999238-14999257 MsG0280007407.01.T01:intron 40.0%
TGAAGGTCCTCATAGCAAAA+AGG + Chr2:14999561-14999580 None:intergenic 40.0%
TGCTTTCACAGCCAGAAAAT+GGG + Chr2:15004386-15004405 None:intergenic 40.0%
TGGAGCTCTCTGAATTTGAA+GGG - Chr2:15002109-15002128 MsG0280007407.01.T01:five_prime_UTR 40.0%
TGTAGGTTGTAGAAGTAAGC+AGG + Chr2:15003631-15003650 None:intergenic 40.0%
TGTATGAGTGTGAATGTGCA+TGG - Chr2:14999101-14999120 MsG0280007407.01.T01:CDS 40.0%
TGTTGCAGAGATATTGCAAC+GGG - Chr2:15003578-15003597 MsG0280007407.01.T01:intron 40.0%
TTAACTTACGCGGAATATCC+AGG + Chr2:14999363-14999382 None:intergenic 40.0%
TTGCTTTCACAGCCAGAAAA+TGG + Chr2:15004387-15004406 None:intergenic 40.0%
! ATTCTGCTGCTGCATTTTAC+TGG + Chr2:14997936-14997955 None:intergenic 40.0%
! CATTTGGTGAGAAAAGGCTT+TGG - Chr2:15000529-15000548 MsG0280007407.01.T01:intron 40.0%
! GACTTTTCAATTACGCAGAG+AGG - Chr2:14999702-14999721 MsG0280007407.01.T01:intron 40.0%
! GAGAAAGGCCTTTTTCTGAT+AGG + Chr2:15004191-15004210 None:intergenic 40.0%
! TAGGCAGCTACCATTTTAAG+GGG + Chr2:15003160-15003179 None:intergenic 40.0%
! TAGTCTTACACGGGGTATAT+AGG - Chr2:15005053-15005072 MsG0280007407.01.T01:five_prime_UTR 40.0%
! TATTTCGTCATGGTGACGTT+AGG - Chr2:15001810-15001829 MsG0280007407.01.T01:five_prime_UTR 40.0%
!! AGGGTTCTACTTTGCTTTTC+TGG - Chr2:14999660-14999679 MsG0280007407.01.T01:intron 40.0%
!! CTCAAGTCCTTTTTGCTATG+AGG - Chr2:14999551-14999570 MsG0280007407.01.T01:intron 40.0%
!! TTTGGTGTTATGGCTCTGTT+AGG - Chr2:14998410-14998429 MsG0280007407.01.T01:intron 40.0%
!!! GAATCTCATTTTTGGTGGCT+TGG + Chr2:15003129-15003148 None:intergenic 40.0%
AAAGCACACTGGGCTTATTC+TGG - Chr2:15001851-15001870 MsG0280007407.01.T01:five_prime_UTR 45.0%
AAAGGCCTTTCTCAAAGTGG+AGG - Chr2:15004198-15004217 MsG0280007407.01.T01:intron 45.0%
AAGCACACTGGGCTTATTCT+GGG - Chr2:15001852-15001871 MsG0280007407.01.T01:five_prime_UTR 45.0%
AAGCCATAAAGCTGCAGCTT+GGG + Chr2:15002360-15002379 None:intergenic 45.0%
ACGAGGTTAAGACTTGAGAG+AGG + Chr2:15004781-15004800 None:intergenic 45.0%
AGCACTACTCAAACATGCCT+TGG - Chr2:15003462-15003481 MsG0280007407.01.T01:five_prime_UTR 45.0%
AGCTCTCTGAATTTGAAGGG+TGG - Chr2:15002112-15002131 MsG0280007407.01.T01:five_prime_UTR 45.0%
CACACTCTTCATTGAGGGAT+AGG + Chr2:15005165-15005184 None:intergenic 45.0%
CCGTGTAAGACTAGCATCAT+CGG + Chr2:15005046-15005065 None:intergenic 45.0%
GCATCAGCCATTAACTTACG+CGG + Chr2:14999373-14999392 None:intergenic 45.0%
GCTTCTCAATATGGGACAGA+TGG - Chr2:15004140-15004159 MsG0280007407.01.T01:intron 45.0%
GGAAAGAATCTCAAACCTCC+AGG + Chr2:14999323-14999342 None:intergenic 45.0%
GGCGACCACTGAAATTCATT+GGG + Chr2:15000845-15000864 None:intergenic 45.0%
GGCTTCAGTGTTCTCAAAAG+AGG - Chr2:15002375-15002394 MsG0280007407.01.T01:five_prime_UTR 45.0%
GTGAGTGGATCCAAAGAAGA+AGG - Chr2:14999208-14999227 MsG0280007407.01.T01:intron 45.0%
GTGCTGTGAGAGAACTGTTT+GGG - Chr2:14999166-14999185 MsG0280007407.01.T01:intron 45.0%
GTGGAGCTCTCTGAATTTGA+AGG - Chr2:15002108-15002127 MsG0280007407.01.T01:five_prime_UTR 45.0%
GTTGCAGAGATATTGCAACG+GGG - Chr2:15003579-15003598 MsG0280007407.01.T01:intron 45.0%
TCAGTGGTCGCCAATATTGT+GGG - Chr2:15000853-15000872 MsG0280007407.01.T01:intron 45.0%
TCATCGCCATGTTGAGGTAA+TGG - Chr2:15004620-15004639 MsG0280007407.01.T01:intron 45.0%
TGATCTTCATCGCCATGTTG+AGG - Chr2:15004614-15004633 MsG0280007407.01.T01:intron 45.0%
TGGCACATAAGCGCATCAAA+GGG + Chr2:15003694-15003713 None:intergenic 45.0%
TGGCGACCACTGAAATTCAT+TGG + Chr2:15000846-15000865 None:intergenic 45.0%
TGTGCTGTGAGAGAACTGTT+TGG - Chr2:14999165-14999184 MsG0280007407.01.T01:intron 45.0%
TTCAGTGGTCGCCAATATTG+TGG - Chr2:15000852-15000871 MsG0280007407.01.T01:intron 45.0%
! AGCAACAATTTTCCTCCAGC+AGG + Chr2:14999839-14999858 None:intergenic 45.0%
! CACTGTTTGAGATGCCAACT+TGG + Chr2:15002704-15002723 None:intergenic 45.0%
! CCAAACGTTTTCCCACTATG+TGG - Chr2:15002963-15002982 MsG0280007407.01.T01:five_prime_UTR 45.0%
! CCACATAGTGGGAAAACGTT+TGG + Chr2:15002966-15002985 None:intergenic 45.0%
! CTAACGAAAAGGAAGCACAG+TGG - Chr2:14997589-14997608 MsG0280007407.01.T01:three_prime_UTR 45.0%
! GCAACAATTTTCCTCCAGCA+GGG + Chr2:14999838-14999857 None:intergenic 45.0%
! GTGAGAGAACTGTTTGGGTT+TGG - Chr2:14999171-14999190 MsG0280007407.01.T01:intron 45.0%
! GTGCTTCCTTTTCGTTAGTG+AGG + Chr2:14997587-14997606 None:intergenic 45.0%
! GTTGCCTCACTTTCAGGTAT+CGG + Chr2:15001679-15001698 None:intergenic 45.0%
! TAGAAGGGTTTTGCATGACC+AGG + Chr2:15001140-15001159 None:intergenic 45.0%
! TCTCAAACAGTGCTTGCTGA+AGG - Chr2:15002712-15002731 MsG0280007407.01.T01:five_prime_UTR 45.0%
! TCTTCTGAGAGCATACCTGA+TGG - Chr2:15004848-15004867 MsG0280007407.01.T01:intron 45.0%
! TGATGCCTCCACTTTGAGAA+AGG + Chr2:15004206-15004225 None:intergenic 45.0%
! TGGTTGCGGTTTTCTAAGCA+CGG + Chr2:15005100-15005119 None:intergenic 45.0%
!! AGGCAGCTACCATTTTAAGG+GGG + Chr2:15003159-15003178 None:intergenic 45.0%
!! CCGATGATGCTAGTCTTACA+CGG - Chr2:15005043-15005062 MsG0280007407.01.T01:five_prime_UTR 45.0%
!! CGATGATGCTAGTCTTACAC+GGG - Chr2:15005044-15005063 MsG0280007407.01.T01:five_prime_UTR 45.0%
!! GATGATGCTAGTCTTACACG+GGG - Chr2:15005045-15005064 MsG0280007407.01.T01:five_prime_UTR 45.0%
!! TTCTCAAAGTGGAGGCATCA+TGG - Chr2:15004206-15004225 MsG0280007407.01.T01:intron 45.0%
!! ATTGTTAAATTATAAATTAT+GGG + Chr2:15003821-15003840 None:intergenic 5.0%
AACTGCTGACCAGGAATTGC+TGG + Chr2:15000030-15000049 None:intergenic 50.0%
AAGAGCCACGTCATGAATCC+TGG + Chr2:15002679-15002698 None:intergenic 50.0%
AATCACTCGGCAACTCTGAG+AGG - Chr2:14997995-14998014 MsG0280007407.01.T01:intron 50.0%
AGAGCCACGTCATGAATCCT+GGG + Chr2:15002678-15002697 None:intergenic 50.0%
AGGAGACATGTCACAACCAG+TGG - Chr2:15002732-15002751 MsG0280007407.01.T01:five_prime_UTR 50.0%
AGGCTTAGCAGGGATCAACT+TGG - Chr2:15002006-15002025 MsG0280007407.01.T01:five_prime_UTR 50.0%
CACGTCATGAATCCTGGGAT+GGG + Chr2:15002673-15002692 None:intergenic 50.0%
CAGCGGGACACTATTTAACC+TGG - Chr2:15000628-15000647 MsG0280007407.01.T01:intron 50.0%
CCAGCTGAAGTTCAAGTCCA+AGG + Chr2:14999072-14999091 None:intergenic 50.0%
CCTTGGACTTGAACTTCAGC+TGG - Chr2:14999069-14999088 MsG0280007407.01.T01:CDS 50.0%
CTACCCAAGCTGCAGCTTTA+TGG - Chr2:15002354-15002373 MsG0280007407.01.T01:five_prime_UTR 50.0%
CTGGCACATAAGCGCATCAA+AGG + Chr2:15003695-15003714 None:intergenic 50.0%
CTTTGATGCGCTTATGTGCC+AGG - Chr2:15003693-15003712 MsG0280007407.01.T01:five_prime_UTR 50.0%
GAAGCCATAAAGCTGCAGCT+TGG + Chr2:15002361-15002380 None:intergenic 50.0%
GAATGTGGAACCAGATCCCT+CGG + Chr2:15002758-15002777 None:intergenic 50.0%
GACGTGGCTCTTATCCAAGT+TGG - Chr2:15002687-15002706 MsG0280007407.01.T01:five_prime_UTR 50.0%
GAGAGGGAGAGAGAAAGGTT+AGG + Chr2:14997757-14997776 None:intergenic 50.0%
GATCGTCTCAACACTCATCC+TGG - Chr2:14999302-14999321 MsG0280007407.01.T01:intron 50.0%
GATGGGACTGAGAGTTGCAA+AGG + Chr2:15002656-15002675 None:intergenic 50.0%
GGATCCACTCACTTGAGCTT+TGG + Chr2:14999200-14999219 None:intergenic 50.0%
GGCACATAAGCGCATCAAAG+GGG + Chr2:15003693-15003712 None:intergenic 50.0%
GGCTTAGCAGGGATCAACTT+GGG - Chr2:15002007-15002026 MsG0280007407.01.T01:five_prime_UTR 50.0%
GGTCGCCAATATTGTGGGAA+TGG - Chr2:15000858-15000877 MsG0280007407.01.T01:intron 50.0%
TAAAGCTGCAGCTTGGGTAG+AGG + Chr2:15002354-15002373 None:intergenic 50.0%
TAGAGGAGAGGGAGAGAGAA+AGG + Chr2:14997762-14997781 None:intergenic 50.0%
TCCTCCGATACCTGAAAGTG+AGG - Chr2:15001672-15001691 MsG0280007407.01.T01:five_prime_UTR 50.0%
TGACAACACCTACTGCAGTC+TGG - Chr2:15004533-15004552 MsG0280007407.01.T01:five_prime_UTR 50.0%
TGCAACGGGGAAAAACGGAA+TGG - Chr2:15003592-15003611 MsG0280007407.01.T01:intron 50.0%
TGCAGCTTGGGTAGAGGAAA+AGG + Chr2:15002348-15002367 None:intergenic 50.0%
TGGGTAGAGGAAAAGGTCCA+AGG + Chr2:15002341-15002360 None:intergenic 50.0%
! AAGCCCAGTGTGCTTTTCAC+TGG + Chr2:15001847-15001866 None:intergenic 50.0%
! AAGTTGATCCCTGCTAAGCC+TGG + Chr2:15002007-15002026 None:intergenic 50.0%
! ACAATTTTCCTCCAGCAGGG+AGG + Chr2:14999835-14999854 None:intergenic 50.0%
! AGCCCAGTGTGCTTTTCACT+GGG + Chr2:15001846-15001865 None:intergenic 50.0%
! ATCCCCAGTGAAAAGCACAC+TGG - Chr2:15001840-15001859 MsG0280007407.01.T01:five_prime_UTR 50.0%
! ATTTTCCAGCCAGGCTTAGC+AGG - Chr2:15001995-15002014 MsG0280007407.01.T01:five_prime_UTR 50.0%
! GCACTTGTTGCCTCACTTTC+AGG + Chr2:15001685-15001704 None:intergenic 50.0%
! GGTTGCGGTTTTCTAAGCAC+GGG + Chr2:15005099-15005118 None:intergenic 50.0%
! TCCCCAGTGAAAAGCACACT+GGG - Chr2:15001841-15001860 MsG0280007407.01.T01:five_prime_UTR 50.0%
! TTTTCCAGCCAGGCTTAGCA+GGG - Chr2:15001996-15002015 MsG0280007407.01.T01:five_prime_UTR 50.0%
!! GGCAGCTACCATTTTAAGGG+GGG + Chr2:15003158-15003177 None:intergenic 50.0%
!! TGGTGTAGTTCTAAGGCAGC+AGG + Chr2:14999793-14999812 None:intergenic 50.0%
ATGTCACAACCAGTGGCCGA+GGG - Chr2:15002739-15002758 MsG0280007407.01.T01:five_prime_UTR 55.0%
CCACGTCATGAATCCTGGGA+TGG + Chr2:15002674-15002693 None:intergenic 55.0%
CCATCCCAGGATTCATGACG+TGG - Chr2:15002671-15002690 MsG0280007407.01.T01:five_prime_UTR 55.0%
CGCTGTGTGGCTGCAAACAA+TGG + Chr2:15004806-15004825 None:intergenic 55.0%
CGTCTCAACACTCATCCTGG+AGG - Chr2:14999305-14999324 MsG0280007407.01.T01:intron 55.0%
GCAGCCAAAGCTCAAGTGAG+TGG - Chr2:14999193-14999212 MsG0280007407.01.T01:intron 55.0%
GGACAAGGAGCAACTTGCGA+CGG + Chr2:14998995-14999014 None:intergenic 55.0%
GGCTGCAAACAATGGCAACG+AGG + Chr2:15004798-15004817 None:intergenic 55.0%
! AGTGTTGGGAACTGCTGACC+AGG + Chr2:15000039-15000058 None:intergenic 55.0%
! GCCCAGTGTGCTTTTCACTG+GGG + Chr2:15001845-15001864 None:intergenic 55.0%
! GGGAATTGGCCGTCGTGTTT+TGG - Chr2:14999995-15000014 MsG0280007407.01.T01:five_prime_UTR 55.0%
!! GCCTCACTTTCAGGTATCGG+AGG + Chr2:15001676-15001695 None:intergenic 55.0%
CATGTCACAACCAGTGGCCG+AGG - Chr2:15002738-15002757 MsG0280007407.01.T01:five_prime_UTR 60.0%
GCAACTCTCAGTCCCATCCC+AGG - Chr2:15002658-15002677 MsG0280007407.01.T01:five_prime_UTR 60.0%
TGATCCCTGCTAAGCCTGGC+TGG + Chr2:15002003-15002022 None:intergenic 60.0%
! TTTTCCTCCAGCAGGGAGGC+AGG + Chr2:14999831-14999850 None:intergenic 60.0%
CAACCAGTGGCCGAGGGATC+TGG - Chr2:15002745-15002764 MsG0280007407.01.T01:five_prime_UTR 65.0%
GAACCAGATCCCTCGGCCAC+TGG + Chr2:15002751-15002770 None:intergenic 65.0%
GGATGATCCTGCCTCCCTGC+TGG - Chr2:14999821-14999840 MsG0280007407.01.T01:intron 65.0%
TGATCCTGCCTCCCTGCTGG+AGG - Chr2:14999824-14999843 MsG0280007407.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr2 gene 14997511 15005239 14997511 ID=MsG0280007407.01;Name=MsG0280007407.01
Chr2 mRNA 14997511 15005239 14997511 ID=MsG0280007407.01.T01;Parent=MsG0280007407.01;Name=MsG0280007407.01.T01;_AED=0.28;_eAED=0.28;_QI=2907|1|1|1|0.30|0.28|14|406|146
Chr2 exon 14997511 14997934 14997511 ID=MsG0280007407.01.T01:exon:3254;Parent=MsG0280007407.01.T01
Chr2 exon 14998115 14998199 14998115 ID=MsG0280007407.01.T01:exon:3253;Parent=MsG0280007407.01.T01
Chr2 exon 14998506 14998591 14998506 ID=MsG0280007407.01.T01:exon:3252;Parent=MsG0280007407.01.T01
Chr2 exon 14998805 14998877 14998805 ID=MsG0280007407.01.T01:exon:3251;Parent=MsG0280007407.01.T01
Chr2 exon 14999036 14999164 14999036 ID=MsG0280007407.01.T01:exon:3250;Parent=MsG0280007407.01.T01
Chr2 exon 14999922 15000098 14999922 ID=MsG0280007407.01.T01:exon:3249;Parent=MsG0280007407.01.T01
Chr2 exon 15000663 15000746 15000663 ID=MsG0280007407.01.T01:exon:3248;Parent=MsG0280007407.01.T01
Chr2 exon 15001018 15001095 15001018 ID=MsG0280007407.01.T01:exon:3247;Parent=MsG0280007407.01.T01
Chr2 exon 15001170 15003030 15001170 ID=MsG0280007407.01.T01:exon:3246;Parent=MsG0280007407.01.T01
Chr2 exon 15003377 15003553 15003377 ID=MsG0280007407.01.T01:exon:3245;Parent=MsG0280007407.01.T01
Chr2 exon 15003660 15003784 15003660 ID=MsG0280007407.01.T01:exon:3244;Parent=MsG0280007407.01.T01
Chr2 exon 15004499 15004588 15004499 ID=MsG0280007407.01.T01:exon:3243;Parent=MsG0280007407.01.T01
Chr2 exon 15004734 15004824 15004734 ID=MsG0280007407.01.T01:exon:3242;Parent=MsG0280007407.01.T01
Chr2 exon 15004966 15005239 15004966 ID=MsG0280007407.01.T01:exon:3241;Parent=MsG0280007407.01.T01
Chr2 five_prime_UTR 15004966 15005239 15004966 ID=MsG0280007407.01.T01:five_prime_utr;Parent=MsG0280007407.01.T01
Chr2 five_prime_UTR 15004734 15004824 15004734 ID=MsG0280007407.01.T01:five_prime_utr;Parent=MsG0280007407.01.T01
Chr2 five_prime_UTR 15004499 15004588 15004499 ID=MsG0280007407.01.T01:five_prime_utr;Parent=MsG0280007407.01.T01
Chr2 five_prime_UTR 15003660 15003784 15003660 ID=MsG0280007407.01.T01:five_prime_utr;Parent=MsG0280007407.01.T01
Chr2 five_prime_UTR 15003377 15003553 15003377 ID=MsG0280007407.01.T01:five_prime_utr;Parent=MsG0280007407.01.T01
Chr2 five_prime_UTR 15001170 15003030 15001170 ID=MsG0280007407.01.T01:five_prime_utr;Parent=MsG0280007407.01.T01
Chr2 five_prime_UTR 15001018 15001095 15001018 ID=MsG0280007407.01.T01:five_prime_utr;Parent=MsG0280007407.01.T01
Chr2 five_prime_UTR 15000663 15000746 15000663 ID=MsG0280007407.01.T01:five_prime_utr;Parent=MsG0280007407.01.T01
Chr2 five_prime_UTR 14999972 15000098 14999972 ID=MsG0280007407.01.T01:five_prime_utr;Parent=MsG0280007407.01.T01
Chr2 CDS 14999922 14999971 14999922 ID=MsG0280007407.01.T01:cds;Parent=MsG0280007407.01.T01
Chr2 CDS 14999036 14999164 14999036 ID=MsG0280007407.01.T01:cds;Parent=MsG0280007407.01.T01
Chr2 CDS 14998805 14998877 14998805 ID=MsG0280007407.01.T01:cds;Parent=MsG0280007407.01.T01
Chr2 CDS 14998506 14998591 14998506 ID=MsG0280007407.01.T01:cds;Parent=MsG0280007407.01.T01
Chr2 CDS 14998115 14998199 14998115 ID=MsG0280007407.01.T01:cds;Parent=MsG0280007407.01.T01
Chr2 CDS 14997917 14997934 14997917 ID=MsG0280007407.01.T01:cds;Parent=MsG0280007407.01.T01
Chr2 three_prime_UTR 14997511 14997916 14997511 ID=MsG0280007407.01.T01:three_prime_utr;Parent=MsG0280007407.01.T01
Chr2 mRNA 14998097 14999274 14998097 ID=MsG0280007407.01.T02;Parent=MsG0280007407.01;Name=MsG0280007407.01.T02;_AED=0.47;_eAED=0.68;_QI=0|0.5|0|1|0.5|0.66|3|0|178
Chr2 exon 14999036 14999274 14999036 ID=MsG0280007407.01.T02:exon:3257;Parent=MsG0280007407.01.T02
Chr2 exon 14998754 14998877 14998754 ID=MsG0280007407.01.T02:exon:3256;Parent=MsG0280007407.01.T02
Chr2 exon 14998097 14998270 14998097 ID=MsG0280007407.01.T02:exon:3255;Parent=MsG0280007407.01.T02
Chr2 CDS 14999036 14999274 14999036 ID=MsG0280007407.01.T02:cds;Parent=MsG0280007407.01.T02
Chr2 CDS 14998754 14998877 14998754 ID=MsG0280007407.01.T02:cds;Parent=MsG0280007407.01.T02
Chr2 CDS 14998097 14998270 14998097 ID=MsG0280007407.01.T02:cds;Parent=MsG0280007407.01.T02
Gene Sequence

>MsG0280007407.01.T01

ATGAGAACATACTTAAACCTGATGAAGAAGACACTTATGAGTTTGCCTAAAGATATTGCAACGGGGAAAAACGGAATGGAAGTGATGCTCAACCTGCTTACTTCTACAACCTACAAATGGATTCATTCACCGGAAATTTCGTCAGCATTAAAATCCCCTTTGATGCGCTTATGTGCCAGATACCTACTGAAAGAGAAGAAGAGAGGAAAAGCTTTGGACTCTGTAGCAAATTTTCACTTGCAAAATGGAGCGATGGTTGAAAGAATAAATTGGATGGCAGACCTATCAGAAAAAGGCCTTTCTCAAAGTGGAGGCATCATGGTGAACTATGTATATAGTCTGGATAACATAGAAGAATTTGCTCATTCATACTTCAGCAACGGCGTAATCCAAGCTTCAAGTGATCTTCATCGCCATGTTGAGCCACACAGCGACAAATAA

>MsG0280007407.01.T02

ATGCCTTGGCCATTAATGATGACAAATAATGTTATAGTAACTTCTATTTGCTTTGCTAATTTGTCTCTAATGTCATTCTCTCAAGTGACTAATTTCAGTATGTGTTGCAGAGATATTGCAACGGGGAAAAACGGAATGGAAGTGATGCTCAACCTGCTTACTTCTACAACCTACAAATGGATTCATTCACCGGAAATTTCGTCAGCATTAAAATCCCCTTTGATGCGCTTATGTGCCAGATACCTACTGAAAGAGAAGAAGAGAGGAAAAGCTTTGGACTCTGTAGCAAATTTTCACTTGCAAAATGGAGCGGTATGTCCTGAATCTATCATTGGAAATTGCATTTTGTTTGTGAAACCAACAATGAATCAATTTCAAATTTTATTTTACTTTATCAAGTTTGTTGCATATGCTGATGACAACACCTACTGCAGTCTGGATAACATAGAAGAATTTGCTCATTCATACTTCAGCAACGGCGTAATCCAAGCTTCAAGTGATCTTCATCGCCATGTTGAGGTAATGGCTTCTTCTTAA
Protein sequence

>MsG0280007407.01.T01

MRTYLNLMKKTLMSLPKDIATGKNGMEVMLNLLTSTTYKWIHSPEISSALKSPLMRLCARYLLKEKKRGKALDSVANFHLQNGAMVERINWMADLSEKGLSQSGGIMVNYVYSLDNIEEFAHSYFSNGVIQASSDLHRHVEPHSDK*

>MsG0280007407.01.T02

MPWPLMMTNNVIVTSICFANLSLMSFSQVTNFSMCCRDIATGKNGMEVMLNLLTSTTYKWIHSPEISSALKSPLMRLCARYLLKEKKRGKALDSVANFHLQNGAVCPESIIGNCILFVKPTMNQFQILFYFIKFVAYADDNTYCSLDNIEEFAHSYFSNGVIQASSDLHRHVEVMASS*