AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280007712.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007712.01.T01 MTR_2g030400 94.602 352 19 0 1 352 1 352 0.0 671
MsG0280007712.01.T01 MTR_2g030400 94.393 321 18 0 1 321 1 321 0.0 603
MsG0280007712.01.T01 MTR_2g030400 92.953 298 21 0 1 298 1 298 0.0 552
MsG0280007712.01.T01 MTR_2g030400 93.284 268 18 0 1 268 1 268 3.42e-177 493
MsG0280007712.01.T01 MTR_2g099910 31.429 315 190 8 41 352 47 338 2.85e-31 121
MsG0280007712.01.T01 MTR_2g099910 33.028 218 132 3 41 257 47 251 4.76e-27 107
MsG0280007712.01.T01 MTR_8g102470 26.552 290 184 6 41 325 37 302 7.08e-23 97.8
MsG0280007712.01.T01 MTR_8g102470 26.552 290 184 6 41 325 13 278 1.40e-22 96.7
MsG0280007712.01.T01 MTR_2g099910 33.161 193 115 3 41 232 47 226 9.92e-22 92.8
MsG0280007712.01.T01 MTR_8g028120 30.909 220 139 3 41 260 2 208 1.68e-21 93.2
MsG0280007712.01.T01 MTR_8g088900 26.667 300 195 7 35 329 9 288 3.19e-21 94.0
MsG0280007712.01.T01 MTR_6g069685 28.094 299 191 8 40 334 325 603 8.79e-21 94.0
MsG0280007712.01.T01 MTR_6g069685 23.140 242 165 4 42 278 7 232 4.93e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007712.01.T01 AT4G20930 70.684 307 90 0 42 348 40 346 2.73e-165 465
MsG0280007712.01.T01 AT4G20930 69.708 274 83 0 75 348 1 274 2.00e-144 409
MsG0280007712.01.T01 AT1G17650 29.276 304 192 5 41 342 9 291 8.14e-29 113
MsG0280007712.01.T01 AT1G17650 29.470 302 190 5 41 340 68 348 1.03e-28 114
MsG0280007712.01.T01 AT4G29120 28.276 290 179 5 41 325 39 304 7.50e-27 108
MsG0280007712.01.T01 AT3G25530 27.723 303 194 6 41 340 2 282 2.37e-22 95.9
MsG0280007712.01.T01 AT1G18270 27.907 301 195 8 25 322 307 588 4.54e-22 98.2
MsG0280007712.01.T01 AT1G18270 25.000 280 191 7 42 320 5 266 1.58e-13 72.4
MsG0280007712.01.T01 AT1G18270 27.907 301 195 8 25 322 308 589 4.54e-22 98.2
MsG0280007712.01.T01 AT1G18270 24.911 281 191 8 42 320 5 267 4.99e-12 67.8
MsG0280007712.01.T01 AT1G18270 27.907 301 195 8 25 322 307 588 4.70e-22 98.2
MsG0280007712.01.T01 AT1G18270 25.000 280 191 7 42 320 5 266 1.48e-13 72.4
MsG0280007712.01.T01 AT1G18270 27.907 301 195 8 25 322 307 588 4.72e-22 98.2
MsG0280007712.01.T01 AT1G18270 25.000 280 191 7 42 320 5 266 1.55e-13 72.4
MsG0280007712.01.T01 AT3G25530 31.019 216 137 3 41 256 2 205 1.30e-21 91.7
MsG0280007712.01.T01 AT3G25530 27.063 303 185 6 41 340 2 271 5.57e-21 91.7
MsG0280007712.01.T01 AT1G71170 27.778 252 160 7 48 298 22 252 2.95e-15 75.9
MsG0280007712.01.T01 AT1G71180 26.877 253 165 5 48 300 43 275 3.37e-14 72.8

Find 6 sgRNAs with CRISPR-Local

Find 480 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCAATCAATCATCACTTGC+AGG 0.277191 2:-19525610 MsG0280007711.01.T01:intron
AGATAGCTATGAAGATTTGC+AGG 0.401997 2:-19525716 MsG0280007712.01.T01:exon
GATGGTTTGAGAATTACATT+TGG 0.426174 2:+19525668 None:intergenic
ATGGTTTGAGAATTACATTT+GGG 0.441341 2:+19525669 None:intergenic
AAACTATGTGCTGCTGCAAC+TGG 0.466893 2:+19525636 None:intergenic
TGCAACTGGTGATGTTGAGA+TGG 0.522019 2:+19525650 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATTGAATTTGTAAAATAT+TGG - Chr2:19522309-19522328 MsG0280007712.01.T01:intron 10.0%
!! TTAATATCTTACAAAATATA+GGG - Chr2:19525142-19525161 MsG0280007711.01.T01:CDS 10.0%
!! TTTGATATAAAAATTATCAT+TGG - Chr2:19523449-19523468 MsG0280007712.01.T01:intron 10.0%
!!! TTTCATTTTTTTGTTAATTT+TGG - Chr2:19519474-19519493 MsG0280007712.01.T01:intron 10.0%
!! AAGAAAGAAAATAATAGTAA+TGG + Chr2:19522243-19522262 None:intergenic 15.0%
!! ATAATTGTATTAAACAAGAA+TGG - Chr2:19523715-19523734 MsG0280007712.01.T01:intron 15.0%
!! ATTAAAAAATGGATGTTATT+TGG + Chr2:19522709-19522728 None:intergenic 15.0%
!! GAAATTATTATTGAAAATGA+AGG + Chr2:19520741-19520760 None:intergenic 15.0%
!! GTTAATATCTTACAAAATAT+AGG - Chr2:19525141-19525160 MsG0280007711.01.T01:CDS 15.0%
!! GTTAATTAGATCATATTAAT+TGG - Chr2:19519093-19519112 MsG0280007712.01.T01:intron 15.0%
!! TAAGTAACAAAGTTAAAATT+GGG - Chr2:19523845-19523864 MsG0280007712.01.T01:intron 15.0%
!! TATAAAAAAAATGCATGTTA+AGG + Chr2:19518982-19519001 None:intergenic 15.0%
!! TTACCTACTTAATTAAAAAA+TGG + Chr2:19522720-19522739 None:intergenic 15.0%
!!! AAATATTTTTGGAAAATCAA+TGG - Chr2:19523337-19523356 MsG0280007712.01.T01:intron 15.0%
!!! ACATAATAACAATACAATTT+TGG - Chr2:19523225-19523244 MsG0280007712.01.T01:intron 15.0%
!!! ATATAACTATTTTTGCTTTA+AGG + Chr2:19519684-19519703 None:intergenic 15.0%
!!! TTTGCTTTAAATTGAATTTT+AGG - Chr2:19525280-19525299 MsG0280007711.01.T01:intron 15.0%
!! AAAAGGAAAATAATTACAGT+AGG + Chr2:19525711-19525730 None:intergenic 20.0%
!! AAATGATTAAAAGACTCTTT+AGG + Chr2:19524321-19524340 MsG0280007713.01.T01:CDS 20.0%
!! AATAAATTACTACAACACAA+TGG + Chr2:19524724-19524743 None:intergenic 20.0%
!! AGTAAAATTTCAGCTTATAA+AGG + Chr2:19519152-19519171 None:intergenic 20.0%
!! ATAGCAATACAACTTAAATT+TGG + Chr2:19524790-19524809 None:intergenic 20.0%
!! ATGATATGATATACATTCTA+TGG + Chr2:19522969-19522988 None:intergenic 20.0%
!! ATTCAGTCATATAATAGTAT+TGG + Chr2:19522679-19522698 None:intergenic 20.0%
!! GTAAGTAACAAAGTTAAAAT+TGG - Chr2:19523844-19523863 MsG0280007712.01.T01:intron 20.0%
!! TAGATTAACTAACAATCTTA+CGG - Chr2:19524470-19524489 MsG0280007712.01.T01:intron 20.0%
!! TGAATAATTATACATTGTGT+AGG - Chr2:19523094-19523113 MsG0280007712.01.T01:intron 20.0%
!! TTCAGTCATATAATAGTATT+GGG + Chr2:19522678-19522697 None:intergenic 20.0%
!! TTTCATTACAAATAATATCG+TGG + Chr2:19523580-19523599 MsG0280007713.01.T01:CDS 20.0%
!!! AAAGAGTACATCATTAATAT+TGG + Chr2:19524990-19525009 None:intergenic 20.0%
!!! AATTACTCCTTTTAATGTTT+TGG - Chr2:19523068-19523087 MsG0280007712.01.T01:intron 20.0%
!!! ATCATTAACTGTTTCTTTAT+AGG - Chr2:19519201-19519220 MsG0280007712.01.T01:CDS 20.0%
!!! CATCCATTTTTTAATTAAGT+AGG - Chr2:19522714-19522733 MsG0280007712.01.T01:intron 20.0%
!!! GATTTAATGTTTTAGTACTT+TGG - Chr2:19524502-19524521 MsG0280007712.01.T01:intron 20.0%
!!! TAATTTTGGAAGAATGTATA+TGG - Chr2:19519488-19519507 MsG0280007712.01.T01:intron 20.0%
!!! TATATTCTAAGAGAAAAGAA+AGG - Chr2:19522865-19522884 MsG0280007712.01.T01:intron 20.0%
!!! TGTCTTTGTTTTTTGTTATT+AGG - Chr2:19523919-19523938 MsG0280007712.01.T01:intron 20.0%
!!! TTTGTGACTTGAAATATTTT+TGG - Chr2:19523326-19523345 MsG0280007712.01.T01:intron 20.0%
!!! TTTTGAGAACACTAATAAAT+CGG + Chr2:19524344-19524363 MsG0280007713.01.T01:CDS 20.0%
! AAAATCCTTATTCCTTTCAA+TGG - Chr2:19523780-19523799 MsG0280007712.01.T01:intron 25.0%
! AAAGAAAGAAGTAATCACAA+TGG + Chr2:19525207-19525226 None:intergenic 25.0%
! AAATCCTTATTCCTTTCAAT+GGG - Chr2:19523781-19523800 MsG0280007712.01.T01:intron 25.0%
! AATGAAACAACCTAATCATA+TGG + Chr2:19519461-19519480 None:intergenic 25.0%
! ACAATCAAAGCCTAATAATA+AGG + Chr2:19521121-19521140 None:intergenic 25.0%
! ACATCATTAATATTGGAGAT+TGG + Chr2:19524983-19525002 None:intergenic 25.0%
! ACTGCAAAAAATTCTTTACT+TGG - Chr2:19524929-19524948 MsG0280007712.01.T01:intron 25.0%
! AGCAAAAATCTGTAATAATC+TGG - Chr2:19523943-19523962 MsG0280007712.01.T01:intron 25.0%
! AGCTATAGTTAACTGAAAAT+TGG + Chr2:19522566-19522585 None:intergenic 25.0%
! ATAATTATACATTGTGTAGG+TGG - Chr2:19523097-19523116 MsG0280007712.01.T01:intron 25.0%
! ATCCATTGGTAAACAAATTT+AGG + Chr2:19525554-19525573 None:intergenic 25.0%
! ATGGTTTGAGAATTACATTT+GGG + Chr2:19518874-19518893 None:intergenic 25.0%
! ATTGTACACAATGCTAAAAA+GGG + Chr2:19524424-19524443 MsG0280007713.01.T01:CDS 25.0%
! CAATCAAAGCCTAATAATAA+GGG + Chr2:19521120-19521139 None:intergenic 25.0%
! CATGATCAAGTAATTAACAA+AGG - Chr2:19523607-19523626 MsG0280007712.01.T01:intron 25.0%
! GAATGATATTGATATAATCC+TGG - Chr2:19523404-19523423 MsG0280007712.01.T01:intron 25.0%
! TATCTCTAGATTTACTATGT+TGG - Chr2:19525017-19525036 MsG0280007712.01.T01:intron 25.0%
! TATTGTACACAATGCTAAAA+AGG + Chr2:19524425-19524444 MsG0280007713.01.T01:CDS 25.0%
! TGATACAATCATATGTTGAA+AGG + Chr2:19520350-19520369 None:intergenic 25.0%
! TGATTAAATTATTCGCCATT+CGG + Chr2:19519375-19519394 None:intergenic 25.0%
! TGTGATCTTACTTCATATTA+TGG - Chr2:19519611-19519630 MsG0280007712.01.T01:intron 25.0%
! TTCAATGTAATCACAAGTAT+CGG + Chr2:19519532-19519551 None:intergenic 25.0%
! TTCTTAGTCAAGATTTGAAT+CGG + Chr2:19522614-19522633 None:intergenic 25.0%
! TTTCATGCATATTCTTAACT+GGG - Chr2:19519041-19519060 MsG0280007712.01.T01:intron 25.0%
!! AAAAGTACAATATATTGTGG+TGG - Chr2:19523805-19523824 MsG0280007712.01.T01:intron 25.0%
!! ATGAAGTATTAGTTCAACAA+AGG + Chr2:19522012-19522031 None:intergenic 25.0%
!! ATTAAAAGACTCTTTAGGAA+AGG + Chr2:19524316-19524335 MsG0280007713.01.T01:CDS 25.0%
!! ATTATTAGGCTTTGATTGTT+CGG - Chr2:19521122-19521141 MsG0280007712.01.T01:intron 25.0%
!! GGTAAAAGTACAATATATTG+TGG - Chr2:19523802-19523821 MsG0280007712.01.T01:intron 25.0%
!! TGTATTGTTATTATGTGTGT+TGG + Chr2:19523221-19523240 None:intergenic 25.0%
!! TTGCATTATTACAGTGATTT+TGG - Chr2:19524685-19524704 MsG0280007712.01.T01:intron 25.0%
!! TTGGTATACTTTTCTCAATT+TGG - Chr2:19523530-19523549 MsG0280007712.01.T01:intron 25.0%
!! TTGTGATTACTTCTTTCTTT+TGG - Chr2:19525207-19525226 MsG0280007711.01.T01:CDS 25.0%
!!! ATCGATTGTTTTGACATAAA+AGG + Chr2:19525728-19525747 None:intergenic 25.0%
!!! TATCATTGATAATGTAGACT+TGG + Chr2:19520799-19520818 None:intergenic 25.0%
!!! TCTTTTAGAAAGGACAATTT+AGG + Chr2:19521261-19521280 None:intergenic 25.0%
!!! TTAATGTTTTAGTACTTTGG+TGG - Chr2:19524505-19524524 MsG0280007712.01.T01:intron 25.0%
AAAATAATTACAGTAGGCAC+AGG + Chr2:19525705-19525724 None:intergenic 30.0%
AAATAAATACTTCAACCTCC+TGG + Chr2:19524250-19524269 MsG0280007713.01.T01:CDS 30.0%
AAATAATTACAGTAGGCACA+GGG + Chr2:19525704-19525723 None:intergenic 30.0%
AATTTCCAGAATCAAATGCA+TGG + Chr2:19523272-19523291 None:intergenic 30.0%
ACATTCTCATGAAATTGTCA+AGG + Chr2:19523021-19523040 None:intergenic 30.0%
ATACAGAATGTTGGATTCAT+TGG - Chr2:19519331-19519350 MsG0280007712.01.T01:intron 30.0%
ATCTTACAAAATATAGGGTG+AGG - Chr2:19525147-19525166 MsG0280007711.01.T01:CDS 30.0%
ATTGGTGTAATAGTCTTTCA+AGG - Chr2:19523480-19523499 MsG0280007712.01.T01:intron 30.0%
CAAGTTAAATGCAGTTTACT+TGG + Chr2:19522913-19522932 None:intergenic 30.0%
CAGCAACTTATCATAAAACT+TGG - Chr2:19525524-19525543 MsG0280007711.01.T01:intron 30.0%
CAGTTAAGAATATGCATGAA+AGG + Chr2:19519042-19519061 None:intergenic 30.0%
CTATCACTTCCCTTATTATT+AGG - Chr2:19521108-19521127 MsG0280007712.01.T01:intron 30.0%
CTTAGGTATTATGCAAGAAA+AGG + Chr2:19525430-19525449 None:intergenic 30.0%
CTTTCATGCATATTCTTAAC+TGG - Chr2:19519040-19519059 MsG0280007712.01.T01:intron 30.0%
GAAAGACTATTACACCAATT+TGG + Chr2:19523479-19523498 MsG0280007713.01.T01:CDS 30.0%
GAAAGATTTCTTGATGTTTG+TGG + Chr2:19522829-19522848 None:intergenic 30.0%
GATAGAATTATGTACTCTCT+TGG - Chr2:19523867-19523886 MsG0280007712.01.T01:intron 30.0%
GATCAAGTAATTAACAAAGG+CGG - Chr2:19523610-19523629 MsG0280007712.01.T01:intron 30.0%
GATGAATCTATCAATAACCA+TGG + Chr2:19522796-19522815 None:intergenic 30.0%
GATGGTTTGAGAATTACATT+TGG + Chr2:19518875-19518894 None:intergenic 30.0%
GATTAAATTATTCGCCATTC+GGG + Chr2:19519374-19519393 None:intergenic 30.0%
GCGAATAATTTAATCAAAGC+TGG - Chr2:19519379-19519398 MsG0280007712.01.T01:intron 30.0%
GTCAATAGAATTGAACAAAC+TGG + Chr2:19521183-19521202 None:intergenic 30.0%
GTTAACAAGGAAAAACAAAG+TGG + Chr2:19524390-19524409 MsG0280007713.01.T01:CDS 30.0%
GTTGTGCATCAAATATTAGT+CGG + Chr2:19521767-19521786 None:intergenic 30.0%
TAACCAGATTGAATGTGTTT+GGG + Chr2:19521601-19521620 None:intergenic 30.0%
TAATCATATGGTTGAAGAAG+AGG + Chr2:19519449-19519468 None:intergenic 30.0%
TACAGTGTTTATCAAACTTC+AGG + Chr2:19525256-19525275 None:intergenic 30.0%
TAGCATACAAAAATTGTAGC+TGG + Chr2:19519228-19519247 None:intergenic 30.0%
TAGGTAATTGATGTTTACAC+CGG - Chr2:19522733-19522752 MsG0280007712.01.T01:intron 30.0%
TATCTGCACAAAAAATCCAT+TGG + Chr2:19525568-19525587 None:intergenic 30.0%
TCTTACAAAATATAGGGTGA+GGG - Chr2:19525148-19525167 MsG0280007711.01.T01:CDS 30.0%
TCTTAGTCAAGATTTGAATC+GGG + Chr2:19522613-19522632 None:intergenic 30.0%
TCTTCTTCAACCATATGATT+AGG - Chr2:19519448-19519467 MsG0280007712.01.T01:intron 30.0%
TCTTCTTTCAACACTGATAT+TGG - Chr2:19521032-19521051 MsG0280007712.01.T01:intron 30.0%
TGAAATGAATGTACTCACAT+GGG + Chr2:19522448-19522467 None:intergenic 30.0%
TGGTACTTACTACTGAATTA+GGG + Chr2:19524211-19524230 MsG0280007713.01.T01:CDS 30.0%
TTAAATGCAGTTTACTTGGA+CGG + Chr2:19522909-19522928 None:intergenic 30.0%
TTCAGCACCAAAACATTAAA+AGG + Chr2:19523078-19523097 None:intergenic 30.0%
TTGTGCATCAAATATTAGTC+GGG + Chr2:19521766-19521785 None:intergenic 30.0%
TTTACCCATTGAAAGGAATA+AGG + Chr2:19523788-19523807 MsG0280007713.01.T01:CDS 30.0%
TTTGAGAAAACAGAAGTGAT+TGG + Chr2:19525078-19525097 None:intergenic 30.0%
TTTGCTTGATATGGTTAAGA+AGG + Chr2:19521496-19521515 None:intergenic 30.0%
! AAAGAGTGAGGAAAATTTTC+AGG + Chr2:19521817-19521836 None:intergenic 30.0%
! AAGAGTGAGGAAAATTTTCA+GGG + Chr2:19521816-19521835 None:intergenic 30.0%
! AATCTGTAATAATCTGGCTT+TGG - Chr2:19523949-19523968 MsG0280007712.01.T01:intron 30.0%
! AGAAAGGACAATTTAGGTTA+TGG + Chr2:19521255-19521274 None:intergenic 30.0%
! AGGAGGTTGAAGTATTTATT+TGG - Chr2:19524249-19524268 MsG0280007712.01.T01:intron 30.0%
! AGTAATGGAATGTACTTGTT+AGG + Chr2:19522228-19522247 None:intergenic 30.0%
! ATAGACCCATTGATAATAAC+CGG + Chr2:19521359-19521378 None:intergenic 30.0%
! ATCATTTCCCAAGATGTTTT+GGG - Chr2:19520623-19520642 MsG0280007712.01.T01:intron 30.0%
! CTGTTTTCTCAAACTATTAC+CGG - Chr2:19525085-19525104 MsG0280007712.01.T01:intron 30.0%
! GGAGTAGTATTTTGTTAACA+AGG + Chr2:19524403-19524422 MsG0280007713.01.T01:CDS 30.0%
! GTAATGGAATGTACTTGTTA+GGG + Chr2:19522227-19522246 None:intergenic 30.0%
! GTCCTAAATTTGTTTACCAA+TGG - Chr2:19525549-19525568 MsG0280007711.01.T01:intron 30.0%
! TCATATGGTGTTTTCATTGT+AGG + Chr2:19522378-19522397 None:intergenic 30.0%
! TGAAAGGAATAAGGATTTTG+CGG + Chr2:19523779-19523798 MsG0280007713.01.T01:CDS 30.0%
! TGTATCTGGAAGTATAATTG+CGG - Chr2:19523150-19523169 MsG0280007712.01.T01:intron 30.0%
! TTATCATTGGAGTACCAAAT+TGG - Chr2:19523462-19523481 MsG0280007712.01.T01:intron 30.0%
! TTGTACTTTTACCCATTGAA+AGG + Chr2:19523795-19523814 MsG0280007713.01.T01:CDS 30.0%
!! ACAATTTTGGCACTAATTGT+AGG - Chr2:19523238-19523257 MsG0280007712.01.T01:intron 30.0%
!! ATTGTTTGTTGTACAGATGT+GGG + Chr2:19519809-19519828 None:intergenic 30.0%
!! GGAAGGATTTTCTTTTAGAA+AGG + Chr2:19521271-19521290 None:intergenic 30.0%
!! TTCAATTTGCAAGCTTTGTT+GGG - Chr2:19520951-19520970 MsG0280007712.01.T01:intron 30.0%
!!! AAGAATTTTTTGCAGTACCA+AGG + Chr2:19524925-19524944 None:intergenic 30.0%
!!! GTCTGCATCTTTTTTTATAC+AGG - Chr2:19524148-19524167 MsG0280007712.01.T01:intron 30.0%
AAAGACCATGCATTTGATTC+TGG - Chr2:19523264-19523283 MsG0280007712.01.T01:intron 35.0%
AACAGACTGTATCATGTCTA+AGG + Chr2:19521293-19521312 None:intergenic 35.0%
AACATCTTGGGAAATGATGA+TGG + Chr2:19520621-19520640 None:intergenic 35.0%
AACGTTTGAATGTTTACCTC+AGG - Chr2:19525318-19525337 MsG0280007711.01.T01:intron 35.0%
AACTATGCTGCTAAGTTGTA+AGG - Chr2:19525489-19525508 MsG0280007711.01.T01:intron 35.0%
AAGGGATCAGATTGTTGATA+CGG + Chr2:19520241-19520260 None:intergenic 35.0%
AATAAGGGAAGTGATAGACT+TGG + Chr2:19521105-19521124 None:intergenic 35.0%
AATCCATGAATTCTACCAAC+AGG - Chr2:19520480-19520499 MsG0280007712.01.T01:CDS 35.0%
AATCTAAATGGGAATGTGTG+AGG + Chr2:19519869-19519888 None:intergenic 35.0%
AATGCGATGTATTGAACGAA+AGG + Chr2:19522480-19522499 None:intergenic 35.0%
AATGGTCAGTGACATCAAAA+TGG - Chr2:19523355-19523374 MsG0280007712.01.T01:intron 35.0%
ACAGACTGTATCATGTCTAA+GGG + Chr2:19521292-19521311 None:intergenic 35.0%
ACCAAGTGAAATACATACTG+AGG + Chr2:19520893-19520912 None:intergenic 35.0%
ACTTGAGAATTGACATGGTT+AGG + Chr2:19520026-19520045 None:intergenic 35.0%
AGACCACAAAAGATCATTTG+AGG + Chr2:19523382-19523401 None:intergenic 35.0%
AGACTTGTCATGACATACTT+AGG + Chr2:19525447-19525466 None:intergenic 35.0%
AGATAGCTATGAAGATTTGC+AGG - Chr2:19518824-19518843 MsG0280007712.01.T01:exon 35.0%
AGGATTTGCATCTAAGCTTA+TGG - Chr2:19524624-19524643 MsG0280007712.01.T01:intron 35.0%
AGTCTTTCAAGGACCAAAAT+GGG - Chr2:19523491-19523510 MsG0280007712.01.T01:intron 35.0%
ATAAGGGAAGTGATAGACTT+GGG + Chr2:19521104-19521123 None:intergenic 35.0%
ATCAATATCACTCTCAGATG+AGG - Chr2:19521203-19521222 MsG0280007712.01.T01:intron 35.0%
ATGAAAAGTCTTTCGCATCA+TGG + Chr2:19525612-19525631 None:intergenic 35.0%
ATGAAGTAAGATCACAGACA+CGG + Chr2:19519607-19519626 None:intergenic 35.0%
ATGCACTACATACAGAATGT+TGG - Chr2:19519322-19519341 MsG0280007712.01.T01:intron 35.0%
ATGTTACCTATTCTCATGCA+AGG + Chr2:19523655-19523674 MsG0280007713.01.T01:CDS 35.0%
CAAATGAATTCACAGTTCCT+CGG - Chr2:19520094-19520113 MsG0280007712.01.T01:intron 35.0%
CAACATATGATTGTATCAGC+TGG - Chr2:19520352-19520371 MsG0280007712.01.T01:intron 35.0%
CAATCATATGTTGAAAGGCA+AGG + Chr2:19520345-19520364 None:intergenic 35.0%
CATATTATGGAAACGTCCAA+GGG - Chr2:19519624-19519643 MsG0280007712.01.T01:intron 35.0%
CATGAAAACTCTGCTGATAT+TGG + Chr2:19521854-19521873 None:intergenic 35.0%
CTAATCTTTCCGCTTCTTAT+CGG - Chr2:19523301-19523320 MsG0280007712.01.T01:intron 35.0%
CTGAAATGAATGTACTCACA+TGG + Chr2:19522449-19522468 None:intergenic 35.0%
CTTAGTCAAGATTTGAATCG+GGG + Chr2:19522612-19522631 None:intergenic 35.0%
GAATTAGAAATAGCTGTTGC+TGG + Chr2:19522205-19522224 None:intergenic 35.0%
GACCACAAAAGATCATTTGA+GGG + Chr2:19523381-19523400 None:intergenic 35.0%
GCAATTATACTTCCAGATAC+AGG + Chr2:19523151-19523170 None:intergenic 35.0%
GCAGTTAAATATCTCTGTCA+AGG + Chr2:19524041-19524060 MsG0280007713.01.T01:CDS 35.0%
GTAACCAGATTGAATGTGTT+TGG + Chr2:19521602-19521621 None:intergenic 35.0%
GTGGTACTTACTACTGAATT+AGG + Chr2:19524212-19524231 MsG0280007713.01.T01:CDS 35.0%
TAAAGGCAAAACCAATCACA+TGG + Chr2:19519135-19519154 None:intergenic 35.0%
TAATATGCAGAGAATGCTAG+AGG + Chr2:19519986-19520005 None:intergenic 35.0%
TAGTCTTTCAAGGACCAAAA+TGG - Chr2:19523490-19523509 MsG0280007712.01.T01:intron 35.0%
TAGTGACTTGAGAATTGACA+TGG + Chr2:19520031-19520050 None:intergenic 35.0%
TAGTTCAACAAAGGAGTGAT+GGG + Chr2:19522003-19522022 None:intergenic 35.0%
TATACATTGTGTAGGTGGTT+GGG - Chr2:19523102-19523121 MsG0280007712.01.T01:intron 35.0%
TCACAAAATCCGATAAGAAG+CGG + Chr2:19523313-19523332 None:intergenic 35.0%
TCAGTAGCACATCAAATGAA+TGG + Chr2:19520650-19520669 None:intergenic 35.0%
TCATATTATGGAAACGTCCA+AGG - Chr2:19519623-19519642 MsG0280007712.01.T01:intron 35.0%
TCCAAAAGTTTCTGTAAACC+AGG + Chr2:19523425-19523444 None:intergenic 35.0%
TCCATTGCAGAAAGTGAATT+AGG + Chr2:19521330-19521349 None:intergenic 35.0%
TCCTCAGTATGTATTTCACT+TGG - Chr2:19520889-19520908 MsG0280007712.01.T01:intron 35.0%
TGATGTTTGTGGATCAATAG+TGG + Chr2:19522818-19522837 None:intergenic 35.0%
TGATTGTTCGGAAATTACAG+TGG - Chr2:19521134-19521153 MsG0280007712.01.T01:intron 35.0%
TGTGCATCAAATATTAGTCG+GGG + Chr2:19521765-19521784 None:intergenic 35.0%
TGTGTTTATCTCCATGTGAT+TGG - Chr2:19519121-19519140 MsG0280007712.01.T01:intron 35.0%
TTAGTTCAACAAAGGAGTGA+TGG + Chr2:19522004-19522023 None:intergenic 35.0%
TTATACATTGTGTAGGTGGT+TGG - Chr2:19523101-19523120 MsG0280007712.01.T01:intron 35.0%
TTCAAGAAGCTGTGGAAATT+TGG + Chr2:19520536-19520555 None:intergenic 35.0%
TTCAATCAATCATCACTTGC+AGG - Chr2:19518930-19518949 MsG0280007712.01.T01:CDS 35.0%
TTCACCAGACGAATCTAAAT+GGG + Chr2:19519880-19519899 None:intergenic 35.0%
TTCGTGATATATGCTCACTT+TGG - Chr2:19521547-19521566 MsG0280007712.01.T01:intron 35.0%
TTGAAAATGAAGGAAGTGAC+TGG + Chr2:19520731-19520750 None:intergenic 35.0%
TTGGTTGTCAATCAGAATGA+AGG + Chr2:19521573-19521592 None:intergenic 35.0%
TTTCACCAGACGAATCTAAA+TGG + Chr2:19519881-19519900 None:intergenic 35.0%
TTTGAGCTTGAGATGTTAGT+GGG + Chr2:19525396-19525415 None:intergenic 35.0%
! AGAGTGAGGAAAATTTTCAG+GGG + Chr2:19521815-19521834 None:intergenic 35.0%
! CATCATTTCCCAAGATGTTT+TGG - Chr2:19520622-19520641 MsG0280007712.01.T01:intron 35.0%
! CTTCAATTTGCAAGCTTTGT+TGG - Chr2:19520950-19520969 MsG0280007712.01.T01:intron 35.0%
! GTGAGAATGAATCTGAAACA+TGG + Chr2:19521943-19521962 None:intergenic 35.0%
! TCATTTCCCAAGATGTTTTG+GGG - Chr2:19520624-19520643 MsG0280007712.01.T01:intron 35.0%
! TCCTGGTTTACAGAAACTTT+TGG - Chr2:19523421-19523440 MsG0280007712.01.T01:intron 35.0%
! TGTTTCTGTTGGGGAAAATA+GGG + Chr2:19521646-19521665 None:intergenic 35.0%
! TTACATTAAGCACCCCATTT+TGG + Chr2:19523507-19523526 MsG0280007713.01.T01:CDS 35.0%
! TTTTGAGCTTGAGATGTTAG+TGG + Chr2:19525397-19525416 None:intergenic 35.0%
!! AAACAAGAATGGATTTTCCC+AGG - Chr2:19523726-19523745 MsG0280007712.01.T01:intron 35.0%
!! CATCTTCACTTTTGCAAATG+TGG + Chr2:19522084-19522103 None:intergenic 35.0%
!! CTTGCTTCTGAAACTTCATA+TGG + Chr2:19522393-19522412 None:intergenic 35.0%
!! GATTGTTTGTTGTACAGATG+TGG + Chr2:19519810-19519829 None:intergenic 35.0%
!! GGATTACAAGTTTTATCCCT+TGG + Chr2:19519643-19519662 None:intergenic 35.0%
!!! GCTTTTCGTCATTTTTACTC+AGG - Chr2:19525634-19525653 MsG0280007711.01.T01:CDS 35.0%
!!! TCGTCATTTTTACTCAGGAA+TGG - Chr2:19525639-19525658 MsG0280007711.01.T01:CDS 35.0%
AAACAGTTGCAGCAAAGTTC+TGG - Chr2:19523680-19523699 MsG0280007712.01.T01:intron 40.0%
AAACTCTGCTGATATTGGAG+AGG + Chr2:19521849-19521868 None:intergenic 40.0%
AAATGGGAATGTGTGAGGAA+AGG + Chr2:19519864-19519883 None:intergenic 40.0%
AAGAGAGGTTCAGGAATTGT+TGG + Chr2:19521457-19521476 None:intergenic 40.0%
AAGGTTGTTACCGGTATCTT+CGG - Chr2:19520975-19520994 MsG0280007712.01.T01:intron 40.0%
AAGTAGTTGCAGAACTACAG+AGG + Chr2:19522525-19522544 None:intergenic 40.0%
AATATTAGTCGGGGGAATAG+TGG + Chr2:19521756-19521775 None:intergenic 40.0%
AATCACAACAATCGTGTGGA+GGG + Chr2:19520825-19520844 None:intergenic 40.0%
AATGGGAATGTGTGAGGAAA+GGG + Chr2:19519863-19519882 None:intergenic 40.0%
ACATGGTTAGGCTACAACAA+AGG + Chr2:19520014-19520033 None:intergenic 40.0%
ACTGTATCATGTCTAAGGGA+AGG + Chr2:19521288-19521307 None:intergenic 40.0%
AGAAGCTGTGGAAATTTGGT+TGG + Chr2:19520532-19520551 None:intergenic 40.0%
AGAGATTGAAGATGAGCACA+TGG + Chr2:19522059-19522078 None:intergenic 40.0%
AGATAGTACTCAGGAAAGTG+TGG + Chr2:19520685-19520704 None:intergenic 40.0%
AGATATACTGAGCTCTGCAA+TGG - Chr2:19525583-19525602 MsG0280007711.01.T01:intron 40.0%
AGGAAAGAGTTAGCGTCATA+AGG + Chr2:19521701-19521720 None:intergenic 40.0%
AGGATCACATGACAAAGTAC+AGG + Chr2:19519664-19519683 None:intergenic 40.0%
AGTCATCAGCTAAAGGAAAG+CGG - Chr2:19520061-19520080 MsG0280007712.01.T01:intron 40.0%
AGTGGACCGGTTATTATCAA+TGG - Chr2:19521350-19521369 MsG0280007712.01.T01:intron 40.0%
AGTTAGCGTCATAAGGGAAT+GGG + Chr2:19521694-19521713 None:intergenic 40.0%
ATCGAATCACAACAATCGTG+TGG + Chr2:19520829-19520848 None:intergenic 40.0%
ATCTGGTTACCAAATTCAGC+AGG - Chr2:19521612-19521631 MsG0280007712.01.T01:intron 40.0%
ATCTTCTTGCCACATTTCAG+AGG - Chr2:19520563-19520582 MsG0280007712.01.T01:CDS 40.0%
ATGAACCAGTTGAGCGATTA+AGG - Chr2:19519919-19519938 MsG0280007712.01.T01:CDS 40.0%
ATGAAGCAAACCATTTGGTC+CGG + Chr2:19522755-19522774 None:intergenic 40.0%
ATGTTCTCGAGATGTTCTCT+CGG - Chr2:19522343-19522362 MsG0280007712.01.T01:intron 40.0%
CAACACTGACATGTAGAAAC+CGG + Chr2:19525107-19525126 None:intergenic 40.0%
CAGATTGAATGTGTTTGGGA+TGG + Chr2:19521597-19521616 None:intergenic 40.0%
CATCCCAAACACATTCAATC+TGG - Chr2:19521595-19521614 MsG0280007712.01.T01:intron 40.0%
CATTCCCATTTAGATTCGTC+TGG - Chr2:19519873-19519892 MsG0280007712.01.T01:intron 40.0%
CCTTCTTCAAAGGATTACAG+TGG - Chr2:19524601-19524620 MsG0280007712.01.T01:intron 40.0%
CGATAAATTGCTTCGTTCAC+CGG - Chr2:19520845-19520864 MsG0280007712.01.T01:intron 40.0%
CTTTCCTTTAGCTGATGACT+GGG + Chr2:19520061-19520080 None:intergenic 40.0%
GAAGAACAACCTGCTGAATT+TGG + Chr2:19521624-19521643 None:intergenic 40.0%
GAAGCTGTGGAAATTTGGTT+GGG + Chr2:19520531-19520550 None:intergenic 40.0%
GAATGGGTCTCAATATGAAC+AGG + Chr2:19521903-19521922 None:intergenic 40.0%
GAGACAAGTTCAAGGAAGAT+CGG + Chr2:19522035-19522054 None:intergenic 40.0%
GCCTAATTCACTTTCTGCAA+TGG - Chr2:19521326-19521345 MsG0280007712.01.T01:intron 40.0%
GGAAAGAGTTAGCGTCATAA+GGG + Chr2:19521700-19521719 None:intergenic 40.0%
GGAACTGTGAATTCATTTGC+AGG + Chr2:19520093-19520112 None:intergenic 40.0%
GGCATGAAACTAACATTGAG+TGG + Chr2:19520710-19520729 None:intergenic 40.0%
GTCTCAATATGAACAGGATC+AGG + Chr2:19521897-19521916 None:intergenic 40.0%
GTCTTTCAAGGACCAAAATG+GGG - Chr2:19523492-19523511 MsG0280007712.01.T01:intron 40.0%
GTGCATCAAATATTAGTCGG+GGG + Chr2:19521764-19521783 None:intergenic 40.0%
GTGGACCGGTTATTATCAAT+GGG - Chr2:19521351-19521370 MsG0280007712.01.T01:intron 40.0%
TACTGCTAGGTTCAAGTCTT+TGG + Chr2:19525344-19525363 None:intergenic 40.0%
TAGATTCGTCTGGTGAAACA+TGG - Chr2:19519883-19519902 MsG0280007712.01.T01:intron 40.0%
TAGCAGCATAGTTCTCACAA+CGG + Chr2:19525482-19525501 None:intergenic 40.0%
TAGTAAGTACCACGTCAAGT+TGG - Chr2:19524219-19524238 MsG0280007712.01.T01:intron 40.0%
TATGGTTAAGAAGGCTGAGA+TGG + Chr2:19521487-19521506 None:intergenic 40.0%
TCAATATGAACAGGATCAGG+AGG + Chr2:19521894-19521913 None:intergenic 40.0%
TCTTCAAAGGATTACAGTGG+AGG - Chr2:19524604-19524623 MsG0280007712.01.T01:intron 40.0%
TGAACCAGTTGAGCGATTAA+GGG - Chr2:19519920-19519939 MsG0280007712.01.T01:CDS 40.0%
TGTTCTGTTGAGGATGAAGA+CGG - Chr2:19520279-19520298 MsG0280007712.01.T01:intron 40.0%
TTACAGCCTTGCATGAGAAT+AGG - Chr2:19523646-19523665 MsG0280007712.01.T01:intron 40.0%
TTATCCCAGTCATCAGCTAA+AGG - Chr2:19520054-19520073 MsG0280007712.01.T01:intron 40.0%
TTATGACGCTAACTCTTTCC+TGG - Chr2:19521700-19521719 MsG0280007712.01.T01:CDS 40.0%
TTCACTTTCTGCAATGGAAG+TGG - Chr2:19521332-19521351 MsG0280007712.01.T01:intron 40.0%
TTCAGGAATTGTTGGAACGT+CGG + Chr2:19521449-19521468 None:intergenic 40.0%
TTGTTGGGTAAGGTTGTTAC+CGG - Chr2:19520966-19520985 MsG0280007712.01.T01:intron 40.0%
! AATGTTGGATTCATTGGCCT+TGG - Chr2:19519337-19519356 MsG0280007712.01.T01:intron 40.0%
! ACAATATATTGTGGTGGAGC+AGG - Chr2:19523811-19523830 MsG0280007712.01.T01:intron 40.0%
! CAATATATTGTGGTGGAGCA+GGG - Chr2:19523812-19523831 MsG0280007712.01.T01:intron 40.0%
! CCACTGTAATCCTTTGAAGA+AGG + Chr2:19524604-19524623 None:intergenic 40.0%
! GATGAGTAATGGTGGTTCTA+GGG + Chr2:19521789-19521808 None:intergenic 40.0%
! GGGGTGCTTAATGTAACATT+TGG - Chr2:19523511-19523530 MsG0280007712.01.T01:intron 40.0%
! GTGGAGACTAATTTTCCTGA+AGG + Chr2:19522164-19522183 None:intergenic 40.0%
! GTGTTTCTGTTGGGGAAAAT+AGG + Chr2:19521647-19521666 None:intergenic 40.0%
! TCTCAGATGAGGTATCAGAT+AGG - Chr2:19521214-19521233 MsG0280007712.01.T01:intron 40.0%
! TCTGAAATGTGGCAAGAAGA+TGG + Chr2:19520564-19520583 None:intergenic 40.0%
! TGAATGTGTTTGGGATGGAT+TGG + Chr2:19521592-19521611 None:intergenic 40.0%
! TTGGCAGGTTTTGCTTGATA+TGG + Chr2:19521505-19521524 None:intergenic 40.0%
!! AAGAATGGATTTTCCCAGGT+TGG - Chr2:19523730-19523749 MsG0280007712.01.T01:intron 40.0%
!! ATTCATTGGCCTTGGAAACA+TGG - Chr2:19519345-19519364 MsG0280007712.01.T01:intron 40.0%
!! CAAATGGTTTGCTTCATGGT+GGG - Chr2:19522758-19522777 MsG0280007712.01.T01:intron 40.0%
!! GTAATCACAAGTATCGGTGT+TGG + Chr2:19519526-19519545 None:intergenic 40.0%
!! TGAGGAAAATTTTCAGGGGA+TGG + Chr2:19521811-19521830 None:intergenic 40.0%
!! TTCATTGGCCTTGGAAACAT+GGG - Chr2:19519346-19519365 MsG0280007712.01.T01:intron 40.0%
!! TTTGCAAGCTTTGTTGGGTA+AGG - Chr2:19520956-19520975 MsG0280007712.01.T01:intron 40.0%
!!! GCAGCAAAGTTCTGGATTTT+TGG - Chr2:19523688-19523707 MsG0280007712.01.T01:intron 40.0%
AAGTTGGATGCTCCTGTATC+TGG - Chr2:19523136-19523155 MsG0280007712.01.T01:intron 45.0%
ACAATGCCATCCGAAGATAC+CGG + Chr2:19520988-19521007 None:intergenic 45.0%
AGAAGAATCCGTGAATTCCG+TGG + Chr2:19521528-19521547 None:intergenic 45.0%
AGCAGTAGAATCAGCTAAGC+TGG - Chr2:19525357-19525376 MsG0280007711.01.T01:intron 45.0%
AGCTGGGACACTTACTTTCA+TGG - Chr2:19523177-19523196 MsG0280007712.01.T01:intron 45.0%
AGTATAATTGCGGCAGAAGC+TGG - Chr2:19523160-19523179 MsG0280007712.01.T01:intron 45.0%
ATATCAGAAGCCCTTGCTCT+AGG - Chr2:19523989-19524008 MsG0280007712.01.T01:intron 45.0%
ATCCTCAACAGAACAAGACC+TGG + Chr2:19520274-19520293 None:intergenic 45.0%
CACAGTCGCAAAGTCAGAAT+GGG + Chr2:19521919-19521938 None:intergenic 45.0%
CACATGGTGAGACAAGTTCA+AGG + Chr2:19522043-19522062 None:intergenic 45.0%
CATTATCGAGCTTACAGCCT+TGG - Chr2:19524905-19524924 MsG0280007712.01.T01:intron 45.0%
CCACCATGAAGCAAACCATT+TGG + Chr2:19522760-19522779 None:intergenic 45.0%
CTGCTGATATTGGAGAGGTT+GGG + Chr2:19521844-19521863 None:intergenic 45.0%
GAATCACAACAATCGTGTGG+AGG + Chr2:19520826-19520845 None:intergenic 45.0%
GAATGGCCCCAAAACATCTT+GGG + Chr2:19520633-19520652 None:intergenic 45.0%
GACAATTGGACACAGCAGAA+TGG + Chr2:19520135-19520154 None:intergenic 45.0%
GACACACACGTCATGACAAT+TGG + Chr2:19520149-19520168 None:intergenic 45.0%
GAGTTAGCGTCATAAGGGAA+TGG + Chr2:19521695-19521714 None:intergenic 45.0%
GATGTTTACACCGGACCAAA+TGG - Chr2:19522742-19522761 MsG0280007712.01.T01:intron 45.0%
GCTTTCCTTTAGCTGATGAC+TGG + Chr2:19520062-19520081 None:intergenic 45.0%
GGATCAGATTGTTGATACGG+AGG + Chr2:19520238-19520257 None:intergenic 45.0%
GGATGAGTAATGGTGGTTCT+AGG + Chr2:19521790-19521809 None:intergenic 45.0%
GTATAATTGCGGCAGAAGCT+GGG - Chr2:19523161-19523180 MsG0280007712.01.T01:intron 45.0%
GTTCTGTTGAGGATGAAGAC+GGG - Chr2:19520280-19520299 MsG0280007712.01.T01:intron 45.0%
TATACTGAGCTCTGCAATGG+TGG - Chr2:19525586-19525605 MsG0280007711.01.T01:intron 45.0%
TCACAGTCGCAAAGTCAGAA+TGG + Chr2:19521920-19521939 None:intergenic 45.0%
TCAGCATGACAATTAGCTGC+AGG - Chr2:19524111-19524130 MsG0280007712.01.T01:intron 45.0%
TCAGGAATTGTTGGAACGTC+GGG + Chr2:19521448-19521467 None:intergenic 45.0%
TCCTGAAGGAGTCTCATTCT+CGG + Chr2:19522150-19522169 None:intergenic 45.0%
TCTGCTGATATTGGAGAGGT+TGG + Chr2:19521845-19521864 None:intergenic 45.0%
TGAATGGCCCCAAAACATCT+TGG + Chr2:19520634-19520653 None:intergenic 45.0%
TGAGTGGAGAGATAGTACTC+AGG + Chr2:19520694-19520713 None:intergenic 45.0%
TGATATTGGAGAGGTTGGGA+GGG + Chr2:19521840-19521859 None:intergenic 45.0%
TTAAGAAGGCTGAGATGGAG+AGG + Chr2:19521482-19521501 None:intergenic 45.0%
TTAGGAAAGGTCACTTGCAG+TGG + Chr2:19524303-19524322 MsG0280007713.01.T01:CDS 45.0%
TTCAGGGGATGGATGAGTAA+TGG + Chr2:19521800-19521819 None:intergenic 45.0%
TTCTGTTGAGGATGAAGACG+GGG - Chr2:19520281-19520300 MsG0280007712.01.T01:intron 45.0%
TTGGGAAAAGCCTGTCAAGT+TGG - Chr2:19523120-19523139 MsG0280007712.01.T01:intron 45.0%
TTGGGAGGACCTTCTGATAA+TGG + Chr2:19520513-19520532 None:intergenic 45.0%
TTGTTACCGGTATCTTCGGA+TGG - Chr2:19520979-19520998 MsG0280007712.01.T01:intron 45.0%
TTTCACGAAAACTGCTGCGT+AGG - Chr2:19520382-19520401 MsG0280007712.01.T01:intron 45.0%
TTTCTGCAATGGAAGTGGAC+CGG - Chr2:19521337-19521356 MsG0280007712.01.T01:intron 45.0%
! AAACTATGTGCTGCTGCAAC+TGG + Chr2:19518907-19518926 None:intergenic 45.0%
! AATCGCTCAACTGGTTCATC+AGG + Chr2:19519918-19519937 None:intergenic 45.0%
! CTTTGCTGTATATGCTGCGA+AGG + Chr2:19519840-19519859 None:intergenic 45.0%
! GCTCCTGTTGGTAGAATTCA+TGG + Chr2:19520486-19520505 None:intergenic 45.0%
! GCTTAGCTGATTCTACTGCT+AGG + Chr2:19525357-19525376 None:intergenic 45.0%
! GGCCCTCAAATGATCTTTTG+TGG - Chr2:19523376-19523395 MsG0280007712.01.T01:intron 45.0%
! TGCAACTGGTGATGTTGAGA+TGG + Chr2:19518893-19518912 None:intergenic 45.0%
!! AAGTAGCAGCCTCTGAAATG+TGG + Chr2:19520575-19520594 None:intergenic 45.0%
!! AATGGATTTTCCCAGGTTGG+TGG - Chr2:19523733-19523752 MsG0280007712.01.T01:intron 45.0%
!! CCAAATGGTTTGCTTCATGG+TGG - Chr2:19522757-19522776 MsG0280007712.01.T01:intron 45.0%
!! GGACCAAATGGTTTGCTTCA+TGG - Chr2:19522754-19522773 MsG0280007712.01.T01:intron 45.0%
!! TCAACAAAGGAGTGATGGGT+TGG + Chr2:19521999-19522018 None:intergenic 45.0%
AAGGTCATGCTCACGTTGAG+TGG + Chr2:19520326-19520345 None:intergenic 50.0%
AATGGGTAGAGACCAGTAGC+CGG + Chr2:19521677-19521696 None:intergenic 50.0%
ACCGAGAATGAGACTCCTTC+AGG - Chr2:19522146-19522165 MsG0280007712.01.T01:CDS 50.0%
ACCTGAATGCGATTGCGATG+GGG - Chr2:19521408-19521427 MsG0280007712.01.T01:CDS 50.0%
AGACCTGAATGCGATTGCGA+TGG - Chr2:19521406-19521425 MsG0280007712.01.T01:CDS 50.0%
AGGCAAGAAGATGGAGGAAG+GGG + Chr2:19522118-19522137 None:intergenic 50.0%
AGGGGATGGATGAGTAATGG+TGG + Chr2:19521797-19521816 None:intergenic 50.0%
AGGTCATGCTCACGTTGAGT+GGG + Chr2:19520325-19520344 None:intergenic 50.0%
AGGTTCAAGTCTTTGGCCTG+AGG + Chr2:19525337-19525356 None:intergenic 50.0%
AGTTCCTGGACTGATGGAAG+GGG - Chr2:19524576-19524595 MsG0280007712.01.T01:intron 50.0%
CAAGCAAAACCTGCCAACCA+CGG - Chr2:19521508-19521527 MsG0280007712.01.T01:intron 50.0%
CAGTTCCTGGACTGATGGAA+GGG - Chr2:19524575-19524594 MsG0280007712.01.T01:intron 50.0%
CGCATTCAGGTCTTGCTTAG+AGG + Chr2:19521399-19521418 None:intergenic 50.0%
CTCGAGATGTTCTCTCGGAT+GGG - Chr2:19522348-19522367 MsG0280007712.01.T01:intron 50.0%
CTGATATTGGAGAGGTTGGG+AGG + Chr2:19521841-19521860 None:intergenic 50.0%
CTGCCATTAAGCTGAAGTGC+TGG - Chr2:19524868-19524887 MsG0280007712.01.T01:intron 50.0%
CTGGCATTTCCAACTTGACG+TGG + Chr2:19524231-19524250 MsG0280007713.01.T01:CDS 50.0%
CTGTACACGTTGTCGTCTTC+TGG - Chr2:19520450-19520469 MsG0280007712.01.T01:intron 50.0%
CTTCCATCAGTCCAGGAACT+GGG + Chr2:19524576-19524595 None:intergenic 50.0%
CTTGGGATGTCATGTGCTCA+TGG + Chr2:19521087-19521106 None:intergenic 50.0%
GAATCCGTGAATTCCGTGGT+TGG + Chr2:19521524-19521543 None:intergenic 50.0%
GACCTGAATGCGATTGCGAT+GGG - Chr2:19521407-19521426 MsG0280007712.01.T01:CDS 50.0%
GAGGCAAGAAGATGGAGGAA+GGG + Chr2:19522119-19522138 None:intergenic 50.0%
GCACAAATCACTTCCACCAC+TGG - Chr2:19519711-19519730 MsG0280007712.01.T01:intron 50.0%
GCACCAGCACTTCAGCTTAA+TGG + Chr2:19524874-19524893 None:intergenic 50.0%
GCTGTGGAAATTTGGTTGGG+AGG + Chr2:19520528-19520547 None:intergenic 50.0%
GGAGCTGCTCCATTATCAGA+AGG - Chr2:19520501-19520520 MsG0280007712.01.T01:CDS 50.0%
GTACTCACATGGGCAGAAGA+AGG + Chr2:19522438-19522457 None:intergenic 50.0%
GTAGAATCAGCTAAGCTGGC+TGG - Chr2:19525361-19525380 MsG0280007711.01.T01:intron 50.0%
GTCTCTGCGGGTGATATAAC+CGG + Chr2:19520867-19520886 None:intergenic 50.0%
GTTGGTTGTAGACGCATCAC+AGG + Chr2:19521981-19522000 None:intergenic 50.0%
TCACAGGAAGATGCAGGCTT+AGG + Chr2:19521965-19521984 None:intergenic 50.0%
TCGAGATGTTCTCTCGGATG+GGG - Chr2:19522349-19522368 MsG0280007712.01.T01:intron 50.0%
TCTCGAGATGTTCTCTCGGA+TGG - Chr2:19522347-19522366 MsG0280007712.01.T01:intron 50.0%
TGAGATGGAGAGGCAAAGAG+AGG + Chr2:19521472-19521491 None:intergenic 50.0%
TGGAAACATGGGATCCCGAA+TGG - Chr2:19519357-19519376 MsG0280007712.01.T01:intron 50.0%
TGGCAGCTTTCAAGAAGCTG+TGG + Chr2:19520544-19520563 None:intergenic 50.0%
TTCAGGTCTTGCTTAGAGGC+AGG + Chr2:19521395-19521414 None:intergenic 50.0%
TTCGGGATCCCATGTTTCCA+AGG + Chr2:19519357-19519376 None:intergenic 50.0%
! ACGTGTACAGTGTTGAGCTC+AGG + Chr2:19520440-19520459 None:intergenic 50.0%
! CGTGTACAGTGTTGAGCTCA+GGG + Chr2:19520439-19520458 None:intergenic 50.0%
!! ACAGGAGCATCCAACTTGAC+AGG + Chr2:19523133-19523152 None:intergenic 50.0%
!! ATACTGAGGAGTGTCTCTGC+GGG + Chr2:19520879-19520898 None:intergenic 50.0%
!! CACGTCAAGTTGGAAATGCC+AGG - Chr2:19524229-19524248 MsG0280007712.01.T01:intron 50.0%
!! CATACTGAGGAGTGTCTCTG+CGG + Chr2:19520880-19520899 None:intergenic 50.0%
!! CTCCAGGTCTTGTTCTGTTG+AGG - Chr2:19520269-19520288 MsG0280007712.01.T01:intron 50.0%
!! GATAATGGAGCAGCTCCTGT+TGG + Chr2:19520498-19520517 None:intergenic 50.0%
!! GTCAAGTTGGAAATGCCAGG+AGG - Chr2:19524232-19524251 MsG0280007712.01.T01:intron 50.0%
!! TAGGGATTGGCCTAGAGCAA+GGG + Chr2:19524002-19524021 MsG0280007713.01.T01:CDS 50.0%
AAGACCTGGAGCAGCAGAGA+AGG + Chr2:19520260-19520279 None:intergenic 55.0%
AATGTGTCGAGCACCAGTGG+TGG + Chr2:19519727-19519746 None:intergenic 55.0%
ACCACTGGTGCTCGACACAT+TGG - Chr2:19519726-19519745 MsG0280007712.01.T01:intron 55.0%
AGACCTGGAGCAGCAGAGAA+GGG + Chr2:19520259-19520278 None:intergenic 55.0%
AGCTCAGGGAGCTGCTAAGT+AGG + Chr2:19520425-19520444 None:intergenic 55.0%
AGGTACTTGCAGCAACGCCT+AGG + Chr2:19524021-19524040 MsG0280007713.01.T01:CDS 55.0%
AGGTTGGGAGGGAAAGAGTG+AGG + Chr2:19521829-19521848 None:intergenic 55.0%
AGTCTCATTCTCGGTCGCCA+CGG + Chr2:19522141-19522160 None:intergenic 55.0%
ATTGCTTGGGGGAACTGACC+AGG + Chr2:19521721-19521740 None:intergenic 55.0%
CAACAGAAACACCTCGCAGC+CGG - Chr2:19521655-19521674 MsG0280007712.01.T01:intron 55.0%
CAACCCAGTTCCTGGACTGA+TGG - Chr2:19524570-19524589 MsG0280007712.01.T01:intron 55.0%
CAAGAAGATGGAGGAAGGGG+AGG + Chr2:19522115-19522134 None:intergenic 55.0%
CACGAAAACTGCTGCGTAGG+AGG - Chr2:19520385-19520404 MsG0280007712.01.T01:intron 55.0%
CCAGTTCCTGGACTGATGGA+AGG - Chr2:19524574-19524593 MsG0280007712.01.T01:intron 55.0%
CCTGCCAACCACGGAATTCA+CGG - Chr2:19521517-19521536 MsG0280007712.01.T01:intron 55.0%
CCTTCCATCAGTCCAGGAAC+TGG + Chr2:19524577-19524596 None:intergenic 55.0%
CGAGATGTTCTCTCGGATGG+GGG - Chr2:19522350-19522369 MsG0280007712.01.T01:intron 55.0%
GACGCATCACAGGAAGATGC+AGG + Chr2:19521971-19521990 None:intergenic 55.0%
GACGCTTACAACCCAGTTCC+TGG - Chr2:19524562-19524581 MsG0280007712.01.T01:intron 55.0%
GAGTGCACAATGCAGCTGTG+TGG + Chr2:19522183-19522202 None:intergenic 55.0%
GCAGCCCTTAATCGCTCAAC+TGG + Chr2:19519927-19519946 None:intergenic 55.0%
GCTTTGGCTGTGAGCATGCT+GGG - Chr2:19523965-19523984 MsG0280007712.01.T01:intron 55.0%
GGAGAGGCAAAGAGAGGTTC+AGG + Chr2:19521466-19521485 None:intergenic 55.0%
GGAGGCAAGAAGATGGAGGA+AGG + Chr2:19522120-19522139 None:intergenic 55.0%
GGCATAAACAATCAGCGCCG+AGG + Chr2:19520114-19520133 None:intergenic 55.0%
GGTACTTGCAGCAACGCCTA+GGG + Chr2:19524020-19524039 MsG0280007713.01.T01:CDS 55.0%
GTCCGAGGGGTGAATTGCTT+GGG + Chr2:19521734-19521753 None:intergenic 55.0%
TCATGCTCACGTTGAGTGGG+AGG + Chr2:19520322-19520341 None:intergenic 55.0%
TCCAATGTGTCGAGCACCAG+TGG + Chr2:19519730-19519749 None:intergenic 55.0%
TCCCCATCGCAATCGCATTC+AGG + Chr2:19521412-19521431 None:intergenic 55.0%
TCCGAGGGGTGAATTGCTTG+GGG + Chr2:19521733-19521752 None:intergenic 55.0%
TCCTCCTCCTCTGCCTCTAT+GGG + Chr2:19520175-19520194 None:intergenic 55.0%
TGTCGATCCCATAGAGGCAG+AGG - Chr2:19520165-19520184 MsG0280007712.01.T01:intron 55.0%
TTCCTCAGAGCCACCAACCT+GGG + Chr2:19523746-19523765 MsG0280007713.01.T01:CDS 55.0%
TTGCAGCAACGCCTAGGGAT+TGG + Chr2:19524015-19524034 MsG0280007713.01.T01:CDS 55.0%
! CGTGTGTGTCGATCCCATAG+AGG - Chr2:19520159-19520178 MsG0280007712.01.T01:intron 55.0%
! CTTGCTCTAGGCCAATCCCT+AGG - Chr2:19524001-19524020 MsG0280007712.01.T01:intron 55.0%
! GCTGCGAGGTGTTTCTGTTG+GGG + Chr2:19521655-19521674 None:intergenic 55.0%
! GGCTGCGAGGTGTTTCTGTT+GGG + Chr2:19521656-19521675 None:intergenic 55.0%
! TATTGTGGTGGAGCAGGGAG+TGG - Chr2:19523817-19523836 MsG0280007712.01.T01:intron 55.0%
!! CTAGGGATTGGCCTAGAGCA+AGG + Chr2:19524003-19524022 MsG0280007713.01.T01:CDS 55.0%
!! GGAAGGGGTGCCTTCTTCAA+AGG - Chr2:19524591-19524610 MsG0280007712.01.T01:intron 55.0%
ACTGCTCCAGCGCTCGATGT+TGG - Chr2:19524056-19524075 MsG0280007712.01.T01:intron 60.0%
ATGGAGGAAGGGGAGGTGGA+CGG + Chr2:19522108-19522127 None:intergenic 60.0%
CATAGAGGCAGAGGAGGAGG+AGG - Chr2:19520174-19520193 MsG0280007712.01.T01:intron 60.0%
CCACGGAGGCAAGAAGATGG+AGG + Chr2:19522124-19522143 None:intergenic 60.0%
CCAGCGCTCGATGTTGGAGT+AGG - Chr2:19524062-19524081 MsG0280007712.01.T01:intron 60.0%
CCCCCAAGCAATTCACCCCT+CGG - Chr2:19521729-19521748 MsG0280007712.01.T01:CDS 60.0%
CCGAGGGGTGAATTGCTTGG+GGG + Chr2:19521732-19521751 None:intergenic 60.0%
CCGTGAATTCCGTGGTTGGC+AGG + Chr2:19521520-19521539 None:intergenic 60.0%
CCTACTCCAACATCGAGCGC+TGG + Chr2:19524065-19524084 MsG0280007713.01.T01:CDS 60.0%
CCTCCATCTTCTTGCCTCCG+TGG - Chr2:19522121-19522140 MsG0280007712.01.T01:CDS 60.0%
CGATCCCATAGAGGCAGAGG+AGG - Chr2:19520168-19520187 MsG0280007712.01.T01:intron 60.0%
CTCCTCCTCCTCTGCCTCTA+TGG + Chr2:19520176-19520195 None:intergenic 60.0%
CTTCCTCAGAGCCACCAACC+TGG + Chr2:19523747-19523766 MsG0280007713.01.T01:CDS 60.0%
GAAGATGGAGGAAGGGGAGG+TGG + Chr2:19522112-19522131 None:intergenic 60.0%
GATCCCTTCTCTGCTGCTCC+AGG - Chr2:19520253-19520272 MsG0280007712.01.T01:intron 60.0%
GGTCCGAGGGGTGAATTGCT+TGG + Chr2:19521735-19521754 None:intergenic 60.0%
TCCCATAGAGGCAGAGGAGG+AGG - Chr2:19520171-19520190 MsG0280007712.01.T01:intron 60.0%
TCGCCACGGAGGCAAGAAGA+TGG + Chr2:19522127-19522146 None:intergenic 60.0%
TCGGGGGAATAGTGGTCCGA+GGG + Chr2:19521748-19521767 None:intergenic 60.0%
! CGGCTGCGAGGTGTTTCTGT+TGG + Chr2:19521657-19521676 None:intergenic 60.0%
! GAGGAGGTGGTGGTAAAGGC+AGG - Chr2:19520190-19520209 MsG0280007712.01.T01:intron 60.0%
! GGAGGAGGAGGTGGTGGTAA+AGG - Chr2:19520186-19520205 MsG0280007712.01.T01:intron 60.0%
! GGCTTTGGCTGTGAGCATGC+TGG - Chr2:19523964-19523983 MsG0280007712.01.T01:intron 60.0%
!! TTCCCAGGTTGGTGGCTCTG+AGG - Chr2:19523741-19523760 MsG0280007712.01.T01:intron 60.0%
AACACCTCGCAGCCGGCTAC+TGG - Chr2:19521662-19521681 MsG0280007712.01.T01:intron 65.0%
AGAGGCAGAGGAGGAGGAGG+TGG - Chr2:19520177-19520196 MsG0280007712.01.T01:intron 65.0%
CGGGGGAATAGTGGTCCGAG+GGG + Chr2:19521747-19521766 None:intergenic 65.0%
CTCATTCTCGGTCGCCACGG+AGG + Chr2:19522138-19522157 None:intergenic 65.0%
GGCACCCCTTCCATCAGTCC+AGG + Chr2:19524583-19524602 None:intergenic 65.0%
GTCGGGGGAATAGTGGTCCG+AGG + Chr2:19521749-19521768 None:intergenic 65.0%
GAGACCAGTAGCCGGCTGCG+AGG + Chr2:19521669-19521688 None:intergenic 70.0%
GGCAGAGGAGGAGGAGGTGG+TGG - Chr2:19520180-19520199 MsG0280007712.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr2 gene 19518788 19525774 19518788 ID=MsG0280007712.01;
Chr2 mRNA 19518788 19525774 19518788 ID=MsG0280007712.01.T01;Parent=MsG0280007712.01
Chr2 exon 19518788 19518977 19518788 ID=MsG0280007712.01.T01.exon;Parent=MsG0280007712.01.T01
Chr2 CDS 19518881 19518977 19518881 ID=MsG0280007712.01.T01.cds;Parent=MsG0280007712.01.T01
Chr2 CDS 19519143 19519222 19519143 ID=MsG0280007712.01.T01.cds;Parent=MsG0280007712.01.T01
Chr2 exon 19519143 19519222 19519143 ID=MsG0280007712.01.T01.exon;Parent=MsG0280007712.01.T01
Chr2 CDS 19519917 19520001 19519917 ID=MsG0280007712.01.T01.cds;Parent=MsG0280007712.01.T01
Chr2 exon 19519917 19520001 19519917 ID=MsG0280007712.01.T01.exon;Parent=MsG0280007712.01.T01
Chr2 CDS 19520479 19520621 19520479 ID=MsG0280007712.01.T01.cds;Parent=MsG0280007712.01.T01
Chr2 exon 19520479 19520621 19520479 ID=MsG0280007712.01.T01.exon;Parent=MsG0280007712.01.T01
Chr2 CDS 19520719 19520814 19520719 ID=MsG0280007712.01.T01.cds;Parent=MsG0280007712.01.T01
Chr2 exon 19520719 19520814 19520719 ID=MsG0280007712.01.T01.exon;Parent=MsG0280007712.01.T01
Chr2 CDS 19521364 19521446 19521364 ID=MsG0280007712.01.T01.cds;Parent=MsG0280007712.01.T01
Chr2 exon 19521364 19521446 19521364 ID=MsG0280007712.01.T01.exon;Parent=MsG0280007712.01.T01
Chr2 CDS 19521676 19521826 19521676 ID=MsG0280007712.01.T01.cds;Parent=MsG0280007712.01.T01
Chr2 exon 19521676 19521826 19521676 ID=MsG0280007712.01.T01.exon;Parent=MsG0280007712.01.T01
Chr2 CDS 19522113 19522227 19522113 ID=MsG0280007712.01.T01.cds;Parent=MsG0280007712.01.T01
Chr2 exon 19522113 19522227 19522113 ID=MsG0280007712.01.T01.exon;Parent=MsG0280007712.01.T01
Chr2 CDS 19525137 19525225 19525137 ID=MsG0280007712.01.T01.cds;Parent=MsG0280007712.01.T01
Chr2 exon 19525137 19525225 19525137 ID=MsG0280007712.01.T01.exon;Parent=MsG0280007712.01.T01
Chr2 CDS 19525611 19525730 19525611 ID=MsG0280007712.01.T01.cds;Parent=MsG0280007712.01.T01
Chr2 exon 19525611 19525774 19525611 ID=MsG0280007712.01.T01.exon;Parent=MsG0280007712.01.T01
Gene Sequence

>MsG0280007712.01.T01

ATGAAGATTTGCAGGTTGACATCTCTGTTTTCTTCTCTTCCCAAATGTAATTCTCAAACCATCTCAACATCACCAGTTGCAGCAGCACATAGTTTCTCTTCAATCAATCATCACTTGCAGAATGTTGGATTCATTGGCCTTGGAAACATGGGATCCCGAATGGCGAATAATTTAATCAAAGCTGGCTTCAAACTTACAGTTCATGACAAAAACTCTGATGTTCTCGAGATGTTCTCTCGGATGGGGGTTCCTACAATGAAAACACCATATGAAGTTTCAGAAGCAAGTGATATTGTAATTACAATGTTACCTTCTTCTGCCCATGTAATTGATGTTTACACCGGACCAAATGGTTTGCTTCATGGTGGGAAACTCATAAGGCCATGGTTATTGATAGATTCATCCACTATTGATCCACAAACATCAAGAAATCTTTCTGCTACAATATCTAATTATATTCTAAGAGAAAAGAAAGGTGGTTGGGAAAAGCCTGTCAAGTTGGATGCTCCTGTATCTGGAAGTATAATTGCGGCAGAAGCTGGGACACTTACTTTCATGGTTGGTGGCTCTGAGGAAGCGTTTCTCGCCGCAAAATCCTTATTCCTTTCAATGGGTAAAAGTACAATATATTGTGGTGGAGCAGGGAGTGGTTCTGCAGCAAAAATCTGTAATAATCTGGCTTTGGCTGTGAGCATGCTGGGAATATCAGAAGCCCTTGCTCTAGGCCAATCCCTAGGCGTTGCTGCAAGTACCTTGACAGAGATATTTAACTGCTCCAGCGCTCGATGTTGGAGTAGTGACGCTTACAACCCAGTTCCTGGACTGATGGAAGGGGTGCCTTCTTCAAAGGATTACAGTGGAGGATTTGCATCTAAGCTTATGGCCAAAGACTTGAACCTAGCAGTAGAATCAGCTAAGCTGGCTGGATGTAAATACCCACTAACATCTCAAGCTCAAAAAATATATACTGAGCTCTGCAATGGTGGCCATGATGCGAAAGACTTTTCATGTGCTTTTCGTCATTTTTACTCAGGAATGGACGAGCATGTCGACAACTAG
Protein sequence

>MsG0280007712.01.T01

MKICRLTSLFSSLPKCNSQTISTSPVAAAHSFSSINHHLQNVGFIGLGNMGSRMANNLIKAGFKLTVHDKNSDVLEMFSRMGVPTMKTPYEVSEASDIVITMLPSSAHVIDVYTGPNGLLHGGKLIRPWLLIDSSTIDPQTSRNLSATISNYILREKKGGWEKPVKLDAPVSGSIIAAEAGTLTFMVGGSEEAFLAAKSLFLSMGKSTIYCGGAGSGSAAKICNNLALAVSMLGISEALALGQSLGVAASTLTEIFNCSSARCWSSDAYNPVPGLMEGVPSSKDYSGGFASKLMAKDLNLAVESAKLAGCKYPLTSQAQKIYTELCNGGHDAKDFSCAFRHFYSGMDEHVDN*