AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280007752.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007752.01.T01 MTR_2g031240 93.214 280 12 3 54 327 100 378 0.0 526
MsG0280007752.01.T01 MTR_2g031240 92.937 269 12 3 65 327 1 268 0.0 501
MsG0280007752.01.T01 MTR_2g031240 91.698 265 13 3 54 310 24 287 1.36e-175 491
MsG0280007752.01.T01 MTR_2g031240 85.560 277 25 4 65 333 1 270 2.25e-166 466
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007752.01.T01 AT1G04900 66.038 265 75 4 54 310 109 366 2.65e-124 364

Find 85 sgRNAs with CRISPR-Local

Find 343 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCAATCAGATTTATGAAAT+TGG 0.189805 2:-20053064 MsG0280007752.01.T01:intron
GTCATACTGTTATAAACTTT+TGG 0.229071 2:+20052983 None:intergenic
CATCAATACTTAAAAGTATT+TGG 0.237459 2:-20050206 MsG0280007752.01.T01:CDS
TGCACTGCTTTGTGTTGTTT+TGG 0.270413 2:+20050230 None:intergenic
TCCCTTACCTTGTGTCTATC+TGG 0.281030 2:-20049237 MsG0280007752.01.T01:CDS
CTACCCTGAACTTCGGAATA+TGG 0.302296 2:+20052306 None:intergenic
CAGCCAACATCTACGGGGTT+TGG 0.326060 2:+20050171 None:intergenic
AGCCAACATCTACGGGGTTT+GGG 0.366779 2:+20050172 None:intergenic
TATGAAATTGGTGGTGGATC+AGG 0.378631 2:-20053052 MsG0280007752.01.T01:CDS
AACATGTGCCAAGGGTATAA+TGG 0.384981 2:-20053029 MsG0280007752.01.T01:CDS
GAAGCAATCAAAGACATCTT+TGG 0.397390 2:+20050023 None:intergenic
CCTTATGCATTGCAGAAAGA+TGG 0.398596 2:-20049352 MsG0280007752.01.T01:intron
GCAGCCATATTCCGAAGTTC+AGG 0.403736 2:-20052310 MsG0280007752.01.T01:CDS
ATACTTTAGTTGAAACCAAT+GGG 0.403818 2:+20049955 None:intergenic
CCTTAGCCTGCATATAATCT+TGG 0.412755 2:+20049314 None:intergenic
TCTCCCCATGGATGGAAGTC+TGG 0.435494 2:-20050535 MsG0280007752.01.T01:CDS
ATGCTGCTGACCGGAGTGGA+TGG 0.437881 2:-20052274 MsG0280007752.01.T01:CDS
TACAGACAACCAATGTAGTC+AGG 0.441927 2:+20054581 None:intergenic
TCTCTCCTTTACAGGGGATG+TGG 0.447311 2:-20051562 MsG0280007752.01.T01:intron
ACCAATGGGGCTCGTTCACC+AGG 0.459517 2:+20049969 None:intergenic
TATGTAATCCATTATACCCT+TGG 0.463753 2:+20053021 None:intergenic
TACACGTTGTGTTGAGATCA+TGG 0.471367 2:-20050265 MsG0280007752.01.T01:CDS
TCACCAGGTATCTTCACATC+TGG 0.477046 2:+20049984 None:intergenic
AGTTGGCAGCCAACATCTAC+GGG 0.480045 2:+20050165 None:intergenic
ATGTAGTCAGGGTCAAGTGC+CGG 0.481408 2:+20054593 None:intergenic
CAGATTTATGAAATTGGTGG+TGG 0.486094 2:-20053058 MsG0280007752.01.T01:CDS
CAGTTGGCAGCCAACATCTA+CGG 0.488821 2:+20050164 None:intergenic
CTTATGCATTGCAGAAAGAT+GGG 0.490270 2:-20049351 MsG0280007752.01.T01:intron
CGTAGATGTTGGCTGCCAAC+TGG 0.490303 2:-20050163 MsG0280007752.01.T01:intron
ACCTGGTGAACGAGCCCCAT+TGG 0.491505 2:-20049970 MsG0280007752.01.T01:CDS
CCAAGATTATATGCAGGCTA+AGG 0.494514 2:-20049314 MsG0280007752.01.T01:CDS
TATATTAACTGCAGACAGAA+TGG 0.495238 2:-20054548 MsG0280007752.01.T01:intron
TGCTGCTGACCGGAGTGGAT+GGG 0.498696 2:-20052273 MsG0280007752.01.T01:CDS
TGTGGAGCAACAACCATGTT+GGG 0.501059 2:-20051544 MsG0280007752.01.T01:CDS
ATGAGGAGTGTAGATTGAAA+AGG 0.502161 2:+20049268 None:intergenic
TGATGGCTTCAGCAATGGCA+TGG 0.503335 2:+20053833 None:intergenic
TATACTTTAGTTGAAACCAA+TGG 0.506468 2:+20049954 None:intergenic
TGTAGTCAGGGTCAAGTGCC+GGG 0.513801 2:+20054594 None:intergenic
GATTAGCCCTTCACTTGCTG+AGG 0.535517 2:-20052360 MsG0280007752.01.T01:CDS
ACATCTTTGGTAGCACCTCA+TGG 0.540325 2:+20050036 None:intergenic
CTACCAGATGTGAAGATACC+TGG 0.543103 2:-20049987 MsG0280007752.01.T01:CDS
GGCCAGATAGACACAAGGTA+AGG 0.543639 2:+20049235 None:intergenic
GGTTTGAGAAACAGCATGAC+CGG 0.546483 2:-20050514 MsG0280007752.01.T01:intron
TCAAACCAGACTTCCATCCA+TGG 0.547649 2:+20050530 None:intergenic
GAGTCAAATCTCCCCATGGA+TGG 0.552998 2:-20050543 MsG0280007752.01.T01:CDS
GCTGCTGACCGGAGTGGATG+GGG 0.556311 2:-20052272 MsG0280007752.01.T01:intron
GCACTTGACCCTGACTACAT+TGG 0.563356 2:-20054590 MsG0280007752.01.T01:CDS
GCGCATGATGGCTTCAGCAA+TGG 0.565336 2:+20053828 None:intergenic
TACCCAAACCCCGTAGATGT+TGG 0.566438 2:-20050174 MsG0280007752.01.T01:CDS
TTGTGTTGAGATCATGGACT+TGG 0.567657 2:-20050259 MsG0280007752.01.T01:CDS
GATGGCTTCAGCAATGGCAT+GGG 0.569691 2:+20053834 None:intergenic
TTTGCACCTCAGCAAGTGAA+GGG 0.573997 2:+20052354 None:intergenic
AGGGTCAAGTGCCGGGTCGT+AGG 0.574592 2:+20054601 None:intergenic
GAAATTTGCAGTGCGCATGA+TGG 0.574734 2:+20053816 None:intergenic
CAAACCAGACTTCCATCCAT+GGG 0.578665 2:+20050531 None:intergenic
GGTAAGGGACAATAATAATG+AGG 0.580961 2:+20049251 None:intergenic
AATCAGATTTATGAAATTGG+TGG 0.592069 2:-20053061 MsG0280007752.01.T01:intron
CAGCCATATTCCGAAGTTCA+GGG 0.592118 2:-20052309 MsG0280007752.01.T01:CDS
AGATTACCAAGATTATATGC+AGG 0.593430 2:-20049320 MsG0280007752.01.T01:CDS
CCATACGTGTCGATTTGCAT+AGG 0.597385 2:+20054633 None:intergenic
CAGGTATCTTCACATCTGGT+AGG 0.597621 2:+20049988 None:intergenic
ATGTGGAGCAACAACCATGT+TGG 0.600482 2:-20051545 MsG0280007752.01.T01:CDS
GCCAGATAGACACAAGGTAA+GGG 0.601222 2:+20049236 None:intergenic
AATGTCGTGATGCTGCTGAC+CGG 0.608764 2:-20052283 MsG0280007752.01.T01:CDS
CGACATTCTACCCTGAACTT+CGG 0.618541 2:+20052299 None:intergenic
GGATCAGGAACATGTGCCAA+GGG 0.619148 2:-20053037 MsG0280007752.01.T01:CDS
GCATCCTACCCCATCCACTC+CGG 0.625156 2:+20052264 None:intergenic
ATCCGCTAGTCATACAATGT+CGG 0.627031 2:+20049214 None:intergenic
GTAACAAGTGAATCTTGCAA+TGG 0.627051 2:+20050285 None:intergenic
TGGATCAGGAACATGTGCCA+AGG 0.629715 2:-20053038 MsG0280007752.01.T01:CDS
ACAGACAACCAATGTAGTCA+GGG 0.637237 2:+20054582 None:intergenic
CGTGATGCTGCTGACCGGAG+TGG 0.639386 2:-20052278 MsG0280007752.01.T01:CDS
TCGAGCATTATTACCCAACA+TGG 0.642457 2:+20051531 None:intergenic
GGCCGACATTGTATGACTAG+CGG 0.647881 2:-20049216 None:intergenic
ATTACTTGATGTTCTCCATG+AGG 0.660933 2:-20050051 MsG0280007752.01.T01:CDS
GCAATGGCATGGGCATACCA+AGG 0.663850 2:+20053844 None:intergenic
CCTATGCAAATCGACACGTA+TGG 0.667956 2:-20054633 MsG0280007752.01.T01:CDS
ATGTTGGGTAATAATGCTCG+AGG 0.670734 2:-20051529 MsG0280007752.01.T01:intron
CAGAGAGTCAAATCTCCCCA+TGG 0.673123 2:-20050547 MsG0280007752.01.T01:CDS
GGTCATACAATCCTACGACC+CGG 0.675016 2:-20054612 MsG0280007752.01.T01:CDS
TCTGAATAGACAACATCATG+CGG 0.691995 2:+20050566 None:intergenic
TACTTTAGTTGAAACCAATG+GGG 0.716950 2:+20049956 None:intergenic
AAACCAGACTTCCATCCATG+GGG 0.729381 2:+20050532 None:intergenic
ATGTCGGCCAGATAGACACA+AGG 0.758510 2:+20049230 None:intergenic
GTTGGCAGCCAACATCTACG+GGG 0.775007 2:+20050166 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATAAAAAACATATATG+GGG + Chr2:20049877-20049896 None:intergenic 10.0%
!! TGTATAATTGATTAAAAATT+TGG - Chr2:20051365-20051384 MsG0280007752.01.T01:intron 10.0%
!!! TATATTTTATTTTTTGCTTT+TGG - Chr2:20050034-20050053 MsG0280007752.01.T01:CDS 10.0%
!! ATAACATTTAAATCAGAAAA+TGG + Chr2:20053244-20053263 None:intergenic 15.0%
!! ATATATTATATTGAACATCT+AGG + Chr2:20050960-20050979 None:intergenic 15.0%
!! GAATAGTAAAAATAAGTAAT+TGG - Chr2:20052795-20052814 MsG0280007752.01.T01:intron 15.0%
!! TGTAGTAATAATTATACAAA+TGG - Chr2:20051291-20051310 MsG0280007752.01.T01:intron 15.0%
!! TTTATTAACAGAAATTTGAT+TGG + Chr2:20049391-20049410 None:intergenic 15.0%
!!! ATCAAATTAAAGCAATTTTA+TGG - Chr2:20053530-20053549 MsG0280007752.01.T01:intron 15.0%
!!! ATTTTGATTTAAATAATCTG+CGG - Chr2:20049726-20049745 MsG0280007752.01.T01:intron 15.0%
!!! TAAAAATCAATTTGTTTATC+AGG + Chr2:20053801-20053820 None:intergenic 15.0%
!!! TAAAATTTGAAACAATTATG+CGG - Chr2:20053166-20053185 MsG0280007752.01.T01:intron 15.0%
!!! TATTTTCCTAATAAAAGAAA+AGG - Chr2:20052437-20052456 MsG0280007752.01.T01:intron 15.0%
!! AAAAAAGGTAAAATTGATAC+AGG + Chr2:20054221-20054240 None:intergenic 20.0%
!! AAAAAATTGTAACTCAATAG+AGG + Chr2:20051678-20051697 None:intergenic 20.0%
!! AACTGAAACATTATAATAAG+TGG + Chr2:20050642-20050661 None:intergenic 20.0%
!! ATGAAAAACATAAATGATAG+TGG - Chr2:20052563-20052582 MsG0280007752.01.T01:intron 20.0%
!! ATGGTAGAAAATTATCATAT+TGG + Chr2:20054453-20054472 None:intergenic 20.0%
!! CAAAAAAGTTAAAAAAAGAG+TGG + Chr2:20051014-20051033 None:intergenic 20.0%
!! CAAAAGCTTATCAATAAAAA+AGG + Chr2:20054236-20054255 None:intergenic 20.0%
!! CAAAATAAAAACATAATGCA+GGG + Chr2:20050612-20050631 None:intergenic 20.0%
!! CTATGCTTTATATCAATAAT+GGG + Chr2:20049607-20049626 None:intergenic 20.0%
!! TATGCTTTATATCAATAATG+GGG + Chr2:20049606-20049625 None:intergenic 20.0%
!! TGAATAAGTAATGCTTAAAT+TGG - Chr2:20051957-20051976 MsG0280007752.01.T01:intron 20.0%
!! TGTAGAAATTGAACATTTAA+AGG + Chr2:20052241-20052260 None:intergenic 20.0%
!! TTAGAAACAGAATATTAACT+GGG + Chr2:20051509-20051528 None:intergenic 20.0%
!! TTTAGAAACAGAATATTAAC+TGG + Chr2:20051510-20051529 None:intergenic 20.0%
!!! AAAATTTGAAACAATTATGC+GGG - Chr2:20053167-20053186 MsG0280007752.01.T01:intron 20.0%
!!! AAGTAACCTTTTCTTTTATT+AGG + Chr2:20052446-20052465 None:intergenic 20.0%
!!! ACTATCATTTATGTTTTTCA+TGG + Chr2:20052564-20052583 None:intergenic 20.0%
!!! CATCAATACTTAAAAGTATT+TGG - Chr2:20053698-20053717 MsG0280007752.01.T01:intron 20.0%
!!! CTATCATTTATGTTTTTCAT+GGG + Chr2:20052563-20052582 None:intergenic 20.0%
!!! GAGTTACAATTTTTTTATTG+TGG - Chr2:20051683-20051702 MsG0280007752.01.T01:intron 20.0%
!!! TAAAGTCTAGTTTTTCATTT+GGG - Chr2:20051907-20051926 MsG0280007752.01.T01:intron 20.0%
!!! TTTTGATTTAAATAATCTGC+GGG - Chr2:20049727-20049746 MsG0280007752.01.T01:intron 20.0%
! AACTATGCATATAAGAAAGA+TGG + Chr2:20054172-20054191 None:intergenic 25.0%
! AAGAGTAGACATGTATATTA+AGG + Chr2:20050521-20050540 None:intergenic 25.0%
! AATATGGGATATGAAAAACA+AGG + Chr2:20052651-20052670 None:intergenic 25.0%
! AATCAGATTTATGAAATTGG+TGG - Chr2:20050843-20050862 MsG0280007752.01.T01:intron 25.0%
! AATTACAACAAATAGAAAGC+AGG + Chr2:20050689-20050708 None:intergenic 25.0%
! AATTCTAGTAACAATCCAAT+AGG + Chr2:20054268-20054287 None:intergenic 25.0%
! ACAGAAATTTGATTGGAATT+AGG + Chr2:20049384-20049403 None:intergenic 25.0%
! ACATATACAAGAAGAAAGAT+CGG + Chr2:20051348-20051367 None:intergenic 25.0%
! ATAATATCAGAATGATCTGT+GGG - Chr2:20052199-20052218 MsG0280007752.01.T01:intron 25.0%
! ATACTTTAGTTGAAACCAAT+GGG + Chr2:20053952-20053971 None:intergenic 25.0%
! ATGAAAAACTAGACTTTAGA+CGG + Chr2:20051905-20051924 None:intergenic 25.0%
! ATTTGACAAAGATATGTAGA+TGG + Chr2:20050189-20050208 None:intergenic 25.0%
! CACAAATCAAATCATTGAAT+AGG - Chr2:20050429-20050448 MsG0280007752.01.T01:intron 25.0%
! GCAAAATAAAAACATAATGC+AGG + Chr2:20050613-20050632 None:intergenic 25.0%
! GCTATGCTTTATATCAATAA+TGG + Chr2:20049608-20049627 None:intergenic 25.0%
! TAAATCTGATTGCAAATTAG+AGG + Chr2:20050834-20050853 None:intergenic 25.0%
! TACCTGCACAAAATAATATA+AGG + Chr2:20053306-20053325 None:intergenic 25.0%
! TATACTTTAGTTGAAACCAA+TGG + Chr2:20053953-20053972 None:intergenic 25.0%
! TATTAGGAAAATATTAGAGC+AGG + Chr2:20052430-20052449 None:intergenic 25.0%
! TCATCAAAAATAGAGTTTCA+CGG + Chr2:20052265-20052284 None:intergenic 25.0%
! TCTCTATTAAAAGTAGAAAG+TGG + Chr2:20053577-20053596 None:intergenic 25.0%
! TGATATTATCAAGCTATAAC+AGG + Chr2:20052188-20052207 None:intergenic 25.0%
! TGCAATCAGATTTATGAAAT+TGG - Chr2:20050840-20050859 MsG0280007752.01.T01:intron 25.0%
! TTTCATGTCAAAAATGTCAA+TGG + Chr2:20051159-20051178 None:intergenic 25.0%
! TTTGACAAAGATATGTAGAT+GGG + Chr2:20050188-20050207 None:intergenic 25.0%
!! AATAAGTAATTGGTGATTGA+TGG - Chr2:20052805-20052824 MsG0280007752.01.T01:intron 25.0%
!! ACTTTTAATAGAGAAACACT+CGG - Chr2:20053583-20053602 MsG0280007752.01.T01:intron 25.0%
!! ATACTGTTATAAACTTTTGG+AGG + Chr2:20050921-20050940 None:intergenic 25.0%
!! CAGTCTTATGAATATCTTAT+TGG - Chr2:20051424-20051443 MsG0280007752.01.T01:intron 25.0%
!! CTAAACTTTATCCTCTTTTT+GGG - Chr2:20049772-20049791 MsG0280007752.01.T01:intron 25.0%
!! GTCATACTGTTATAAACTTT+TGG + Chr2:20050924-20050943 None:intergenic 25.0%
!! TAAACTTTATCCTCTTTTTG+GGG - Chr2:20049773-20049792 MsG0280007752.01.T01:intron 25.0%
!! TAGACTTCTGATTTTACTTT+GGG - Chr2:20052040-20052059 MsG0280007752.01.T01:intron 25.0%
!! TATCTAGAAGGAAGATTTTA+TGG + Chr2:20051860-20051879 None:intergenic 25.0%
!!! AGCTTCTATTTGATTTGTTA+AGG + Chr2:20054503-20054522 None:intergenic 25.0%
!!! ATTAAAAGAGTATTAACTGC+TGG - Chr2:20049523-20049542 MsG0280007752.01.T01:intron 25.0%
!!! CTAAAGTCTAGTTTTTCATT+TGG - Chr2:20051906-20051925 MsG0280007752.01.T01:intron 25.0%
!!! CTTTTGCTATATTATCCTAT+TGG - Chr2:20054250-20054269 MsG0280007752.01.T01:intron 25.0%
!!! GCTTCTATTTGATTTGTTAA+GGG + Chr2:20054502-20054521 None:intergenic 25.0%
!!! TAACTTTTTTGTTAAGACAG+TGG - Chr2:20051023-20051042 MsG0280007752.01.T01:intron 25.0%
AAAAGTTGAGCAAGCATTAT+AGG - Chr2:20050750-20050769 MsG0280007752.01.T01:intron 30.0%
AACTAAACAAGCTCAACATT+TGG - Chr2:20052146-20052165 MsG0280007752.01.T01:intron 30.0%
AATCAAATCAAGCACATATC+AGG - Chr2:20049822-20049841 MsG0280007752.01.T01:intron 30.0%
AATCAATAACATCCATGAGA+TGG + Chr2:20054413-20054432 None:intergenic 30.0%
ACCAATCAAATAAAACCAGA+AGG + Chr2:20051218-20051237 None:intergenic 30.0%
ACGAAATGGTTTGAAGAATA+TGG + Chr2:20052667-20052686 None:intergenic 30.0%
ACTATCCTATTCGTAACTTA+GGG - Chr2:20051105-20051124 MsG0280007752.01.T01:intron 30.0%
AGATATGTAGATGGGTAAAA+AGG + Chr2:20050180-20050199 None:intergenic 30.0%
AGATGTTATAATGAGACAGT+TGG - Chr2:20052928-20052947 MsG0280007752.01.T01:intron 30.0%
AGATTACCAAGATTATATGC+AGG - Chr2:20054584-20054603 MsG0280007752.01.T01:CDS 30.0%
ATAATGTATTTCACAAGCCA+TGG + Chr2:20049630-20049649 None:intergenic 30.0%
ATATATTGTCCATGGTGTTT+AGG + Chr2:20050389-20050408 None:intergenic 30.0%
ATGAGAGATATTGTTCTCTT+GGG + Chr2:20050567-20050586 None:intergenic 30.0%
ATTGATATAAAGCATAGCCA+TGG - Chr2:20049610-20049629 MsG0280007752.01.T01:intron 30.0%
CACATTAGAACAAGAAATAC+TGG - Chr2:20049578-20049597 MsG0280007752.01.T01:intron 30.0%
CGAAATGGTTTGAAGAATAT+GGG + Chr2:20052666-20052685 None:intergenic 30.0%
CTGGTAAGATAAGTTAATCA+AGG + Chr2:20052893-20052912 None:intergenic 30.0%
CTTTGTCAAATGTTAAGATC+AGG - Chr2:20050198-20050217 MsG0280007752.01.T01:CDS 30.0%
GAAACTAGGAAATGAAAGAA+TGG + Chr2:20051132-20051151 None:intergenic 30.0%
GATAATATCAGAATGATCTG+TGG - Chr2:20052198-20052217 MsG0280007752.01.T01:intron 30.0%
GTATTGTGTATGAAATGAGA+AGG + Chr2:20054011-20054030 None:intergenic 30.0%
TACTTTAGTTGAAACCAATG+GGG + Chr2:20053951-20053970 None:intergenic 30.0%
TATATTAACTGCAGACAGAA+TGG - Chr2:20049356-20049375 MsG0280007752.01.T01:intron 30.0%
TATGTAATCCATTATACCCT+TGG + Chr2:20050886-20050905 None:intergenic 30.0%
TCATGCAATAGTTCTTAGAA+TGG - Chr2:20054034-20054053 MsG0280007752.01.T01:intron 30.0%
TCCTAAAAGGTTTATCTAGA+AGG + Chr2:20051872-20051891 None:intergenic 30.0%
TGAAAAACTAGACTTTAGAC+GGG + Chr2:20051904-20051923 None:intergenic 30.0%
TGATGCAATTATAGTGACAA+TGG + Chr2:20053145-20053164 None:intergenic 30.0%
TGGAGAGAAAAATGAACATA+CGG + Chr2:20053830-20053849 None:intergenic 30.0%
TGTATGATTATGACCACTAT+AGG - Chr2:20052998-20053017 MsG0280007752.01.T01:CDS 30.0%
TTCTCTTGGGCTATTATTAA+TGG + Chr2:20050554-20050573 None:intergenic 30.0%
TTGAATTGGAGTAGATTTAC+TGG - Chr2:20051461-20051480 MsG0280007752.01.T01:intron 30.0%
TTGGGCTATTATTAATGGTA+AGG + Chr2:20050549-20050568 None:intergenic 30.0%
! AATAATGTTCAATAGCTCTG+AGG - Chr2:20054124-20054143 MsG0280007752.01.T01:intron 30.0%
! AGAAGGAAGATTTTATGGTT+AGG + Chr2:20051855-20051874 None:intergenic 30.0%
! AGATTTTATGGTTAGGACTT+TGG + Chr2:20051848-20051867 None:intergenic 30.0%
! CAATTTGTTTATCAGGCTTA+TGG + Chr2:20053794-20053813 None:intergenic 30.0%
! CTAGACTTCTGATTTTACTT+TGG - Chr2:20052039-20052058 MsG0280007752.01.T01:intron 30.0%
! GACTTTATCTTGTTTCTCAT+TGG - Chr2:20049420-20049439 MsG0280007752.01.T01:intron 30.0%
! GCTAAACTTTATCCTCTTTT+TGG - Chr2:20049771-20049790 MsG0280007752.01.T01:intron 30.0%
! TCCTTCTAGATAAACCTTTT+AGG - Chr2:20051868-20051887 MsG0280007752.01.T01:intron 30.0%
! TTGCTGTTAATGAGTTGAAT+TGG - Chr2:20051447-20051466 MsG0280007752.01.T01:intron 30.0%
! TTTATTGTGGCTTCTAAAAG+TGG - Chr2:20051696-20051715 MsG0280007752.01.T01:intron 30.0%
!! ATGATAGTGGAATAGTAGAT+TGG - Chr2:20052576-20052595 MsG0280007752.01.T01:intron 30.0%
!! CTCCTTATATTATTTTGTGC+AGG - Chr2:20053301-20053320 MsG0280007752.01.T01:intron 30.0%
!! CTTTAAAGATGTATTTTGCC+TGG - Chr2:20050487-20050506 MsG0280007752.01.T01:intron 30.0%
!! TGATAGTGGAATAGTAGATT+GGG - Chr2:20052577-20052596 MsG0280007752.01.T01:intron 30.0%
!! TTAGCTTTTTACCATAGAAG+CGG - Chr2:20052715-20052734 MsG0280007752.01.T01:intron 30.0%
!!! CTCTATTTTTGATGATGTGT+CGG - Chr2:20052270-20052289 MsG0280007752.01.T01:intron 30.0%
!!! TCTATTTTTGATGATGTGTC+GGG - Chr2:20052271-20052290 MsG0280007752.01.T01:intron 30.0%
!!! TGGATGTTATTGATTTTGTG+AGG - Chr2:20054418-20054437 MsG0280007752.01.T01:intron 30.0%
AAGCAAGGGATTATTATGGA+AGG - Chr2:20051789-20051808 MsG0280007752.01.T01:intron 35.0%
AATGGCAGATGGAAATATGT+CGG + Chr2:20053127-20053146 None:intergenic 35.0%
ACCACAGTCAAGAAACAAAA+AGG + Chr2:20054319-20054338 None:intergenic 35.0%
ATACACCTAACCACATTCTA+GGG - Chr2:20053448-20053467 MsG0280007752.01.T01:intron 35.0%
ATAGGATAGTCATGCAAAAC+AGG + Chr2:20051095-20051114 None:intergenic 35.0%
ATATTTGCTTGAAACTGTCG+TGG - Chr2:20049925-20049944 MsG0280007752.01.T01:intron 35.0%
ATCAAGCTATAACAGGCATT+TGG + Chr2:20052181-20052200 None:intergenic 35.0%
ATCCATGAGATGGAATAAGT+AGG + Chr2:20054403-20054422 None:intergenic 35.0%
ATGTCAATGGAAGTGAAACT+AGG + Chr2:20051146-20051165 None:intergenic 35.0%
ATTACTTGATGTTCTCCATG+AGG - Chr2:20053853-20053872 MsG0280007752.01.T01:intron 35.0%
ATTATAGTGACAATGGCAGA+TGG + Chr2:20053138-20053157 None:intergenic 35.0%
ATTTGTTCTCTCCTTTACAG+GGG - Chr2:20052336-20052355 MsG0280007752.01.T01:CDS 35.0%
CAAGAGAACAATATCTCTCA+TGG - Chr2:20050566-20050585 MsG0280007752.01.T01:CDS 35.0%
CAGATTTATGAAATTGGTGG+TGG - Chr2:20050846-20050865 MsG0280007752.01.T01:intron 35.0%
CATGAGAGATATTGTTCTCT+TGG + Chr2:20050568-20050587 None:intergenic 35.0%
CATTTGTTCTCTCCTTTACA+GGG - Chr2:20052335-20052354 MsG0280007752.01.T01:CDS 35.0%
CGGTTAATACACAAAGCAAA+TGG + Chr2:20054069-20054088 None:intergenic 35.0%
CTAAGAAAACAAAACTCCCT+TGG - Chr2:20052512-20052531 MsG0280007752.01.T01:intron 35.0%
CTAAGAAAACATAACTCCCT+TGG - Chr2:20052484-20052503 MsG0280007752.01.T01:intron 35.0%
CTATCCTATTCGTAACTTAG+GGG - Chr2:20051106-20051125 MsG0280007752.01.T01:intron 35.0%
CTTATGCATTGCAGAAAGAT+GGG - Chr2:20054553-20054572 MsG0280007752.01.T01:CDS 35.0%
GAAAAACTAGACTTTAGACG+GGG + Chr2:20051903-20051922 None:intergenic 35.0%
GAAGCAATCAAAGACATCTT+TGG + Chr2:20053884-20053903 None:intergenic 35.0%
GACTATCCTATTCGTAACTT+AGG - Chr2:20051104-20051123 MsG0280007752.01.T01:intron 35.0%
GAGGAAGAGATAGTGAAAAT+TGG - Chr2:20052092-20052111 MsG0280007752.01.T01:intron 35.0%
GATATAGCATGTCAACGAAA+TGG + Chr2:20052681-20052700 None:intergenic 35.0%
GATTGAATTACCCTGTAGTA+GGG - Chr2:20051732-20051751 MsG0280007752.01.T01:intron 35.0%
GGAGAACATCAAGTAATTTC+TGG + Chr2:20053850-20053869 None:intergenic 35.0%
GGTAAGGGACAATAATAATG+AGG + Chr2:20054656-20054675 None:intergenic 35.0%
GTAACAAGTGAATCTTGCAA+TGG + Chr2:20053622-20053641 None:intergenic 35.0%
GTGGCACTAACACTATAATT+TGG + Chr2:20050995-20051014 None:intergenic 35.0%
TACAAGAAGAAAGATCGGTA+TGG + Chr2:20051343-20051362 None:intergenic 35.0%
TAGGAAAATATTAGAGCAGG+AGG + Chr2:20052427-20052446 None:intergenic 35.0%
TAGGATAGTCATGCAAAACA+GGG + Chr2:20051094-20051113 None:intergenic 35.0%
TATATTAAGGACCAACTACC+AGG + Chr2:20050508-20050527 None:intergenic 35.0%
TATGCAGGATATATTGTCCA+TGG + Chr2:20050397-20050416 None:intergenic 35.0%
TCATTTGTTCTCTCCTTTAC+AGG - Chr2:20052334-20052353 MsG0280007752.01.T01:CDS 35.0%
TCTAGGGATTCGATAGTTAA+TGG - Chr2:20053464-20053483 MsG0280007752.01.T01:intron 35.0%
TCTGAATAGACAACATCATG+CGG + Chr2:20053341-20053360 None:intergenic 35.0%
TGCATATAAGAAAGATGGCA+AGG + Chr2:20054167-20054186 None:intergenic 35.0%
TGTCAGCTAATGTGAACAAA+GGG - Chr2:20051248-20051267 MsG0280007752.01.T01:intron 35.0%
TTACTATTCCTAGAAAGACC+CGG + Chr2:20052784-20052803 None:intergenic 35.0%
TTCTTGACTGTGGTACTTAT+TGG - Chr2:20054325-20054344 MsG0280007752.01.T01:intron 35.0%
TTGCAAGCAAGGGATTATTA+TGG - Chr2:20051785-20051804 MsG0280007752.01.T01:intron 35.0%
TTGTCAGCTAATGTGAACAA+AGG - Chr2:20051247-20051266 MsG0280007752.01.T01:intron 35.0%
TTGTCATAACCTATGTTACC+AGG + Chr2:20051758-20051777 None:intergenic 35.0%
TTGTGCAGTGTAGAAATGAT+CGG + Chr2:20054089-20054108 None:intergenic 35.0%
! ATGAGGAGTGTAGATTGAAA+AGG + Chr2:20054639-20054658 None:intergenic 35.0%
! GCTTTGGTATGCAATTTTTC+TGG - Chr2:20049850-20049869 MsG0280007752.01.T01:intron 35.0%
! TAAGTAGTGACTTCTGAAGA+TGG + Chr2:20054472-20054491 None:intergenic 35.0%
! TCTTTGTTTCAGTCTAGATC+TGG - Chr2:20050154-20050173 MsG0280007752.01.T01:intron 35.0%
! TGTTTTCTTAGAACCACCAA+GGG + Chr2:20052503-20052522 None:intergenic 35.0%
! TTGTTTTCTTAGAACCACCA+AGG + Chr2:20052504-20052523 None:intergenic 35.0%
!! ACAAAAAAGTGTTGCAAGCA+AGG - Chr2:20051774-20051793 MsG0280007752.01.T01:intron 35.0%
!! ACCTTTTTGTTTCTTGACTG+TGG - Chr2:20054315-20054334 MsG0280007752.01.T01:intron 35.0%
!! CAAAAAAGTGTTGCAAGCAA+GGG - Chr2:20051775-20051794 MsG0280007752.01.T01:intron 35.0%
!! GATAGTGGAATAGTAGATTG+GGG - Chr2:20052578-20052597 MsG0280007752.01.T01:intron 35.0%
!! TGCAGTAAGCTTACTTTTAG+AGG + Chr2:20050120-20050139 None:intergenic 35.0%
!!! GCCTTCTGGTTTTATTTGAT+TGG - Chr2:20051214-20051233 MsG0280007752.01.T01:intron 35.0%
AAAACTAGATCGACCACCAA+GGG + Chr2:20052531-20052550 None:intergenic 40.0%
AACTTCCAGCACAAGTGTTT+AGG + Chr2:20053085-20053104 None:intergenic 40.0%
ACAGACAACCAATGTAGTCA+GGG + Chr2:20049325-20049344 None:intergenic 40.0%
ACTATCGAATCCCTAGAATG+TGG + Chr2:20053461-20053480 None:intergenic 40.0%
ACTTCCAGCACAAGTGTTTA+GGG + Chr2:20053084-20053103 None:intergenic 40.0%
ACTTTGGGCAACATTGATCT+GGG - Chr2:20052055-20052074 MsG0280007752.01.T01:intron 40.0%
AGAAAACAAAACTCCCTTGG+TGG - Chr2:20052515-20052534 MsG0280007752.01.T01:intron 40.0%
AGAAAACATAACTCCCTTGG+TGG - Chr2:20052487-20052506 MsG0280007752.01.T01:intron 40.0%
ATCAATTCCACCCCAAAAAG+AGG + Chr2:20049786-20049805 None:intergenic 40.0%
ATGGCAGATGGAAATATGTC+GGG + Chr2:20053126-20053145 None:intergenic 40.0%
ATGTTGGGTAATAATGCTCG+AGG - Chr2:20052375-20052394 MsG0280007752.01.T01:intron 40.0%
CATACACCTAACCACATTCT+AGG - Chr2:20053447-20053466 MsG0280007752.01.T01:intron 40.0%
CCAAGATTATATGCAGGCTA+AGG - Chr2:20054590-20054609 MsG0280007752.01.T01:CDS 40.0%
CCATCTTTCTGCAATGCATA+AGG + Chr2:20054555-20054574 None:intergenic 40.0%
CCTTAGCCTGCATATAATCT+TGG + Chr2:20054593-20054612 None:intergenic 40.0%
CCTTATGCATTGCAGAAAGA+TGG - Chr2:20054552-20054571 MsG0280007752.01.T01:CDS 40.0%
CGATGAAGTGAAAAACTAGC+AGG - Chr2:20051185-20051204 MsG0280007752.01.T01:intron 40.0%
CGATTGAATTACCCTGTAGT+AGG - Chr2:20051731-20051750 MsG0280007752.01.T01:intron 40.0%
CTCCTACTTATTCCATCTCA+TGG - Chr2:20054398-20054417 MsG0280007752.01.T01:intron 40.0%
GAGGTGCAAAAAGAAACAGT+TGG - Chr2:20051563-20051582 MsG0280007752.01.T01:intron 40.0%
GATTTAAATAATCTGCGGGC+AGG - Chr2:20049731-20049750 MsG0280007752.01.T01:intron 40.0%
GCTAATGTGAACAAAGGGTT+TGG - Chr2:20051253-20051272 MsG0280007752.01.T01:intron 40.0%
GGATAAAGTTTAGCATCCCA+AGG + Chr2:20049765-20049784 None:intergenic 40.0%
GTGAAAATTGGTATGCTGAG+TGG - Chr2:20052104-20052123 MsG0280007752.01.T01:intron 40.0%
TAAAACCTGCCTAAACACCA+TGG - Chr2:20050377-20050396 MsG0280007752.01.T01:intron 40.0%
TACACGTTGTGTTGAGATCA+TGG - Chr2:20053639-20053658 MsG0280007752.01.T01:intron 40.0%
TACAGACAACCAATGTAGTC+AGG + Chr2:20049326-20049345 None:intergenic 40.0%
TACTTTGGGCAACATTGATC+TGG - Chr2:20052054-20052073 MsG0280007752.01.T01:intron 40.0%
TAGGGCCAATAGATGTCAAA+TGG + Chr2:20053066-20053085 None:intergenic 40.0%
TCGAGCATTATTACCCAACA+TGG + Chr2:20052376-20052395 None:intergenic 40.0%
TGACATTTCTGCAGTTACAG+TGG + Chr2:20050351-20050370 None:intergenic 40.0%
TTGTGTTGAGATCATGGACT+TGG - Chr2:20053645-20053664 MsG0280007752.01.T01:intron 40.0%
TTTGTTCTCCAAAGGCAAAC+AGG - Chr2:20053038-20053057 MsG0280007752.01.T01:CDS 40.0%
! AACATGTGCCAAGGGTATAA+TGG - Chr2:20050875-20050894 MsG0280007752.01.T01:intron 40.0%
! GATGTATTTTGCCTGGTAGT+TGG - Chr2:20050494-20050513 MsG0280007752.01.T01:intron 40.0%
! TTGAGAGTGATGATGTCGTA+GGG - Chr2:20052751-20052770 MsG0280007752.01.T01:intron 40.0%
! TTGCCTTTGGAGAACAAACT+GGG + Chr2:20053036-20053055 None:intergenic 40.0%
! TTTGAGAGTGATGATGTCGT+AGG - Chr2:20052750-20052769 MsG0280007752.01.T01:intron 40.0%
! TTTGCCTTTGGAGAACAAAC+TGG + Chr2:20053037-20053056 None:intergenic 40.0%
!! ACTTTATCCTCTTTTTGGGG+TGG - Chr2:20049776-20049795 MsG0280007752.01.T01:intron 40.0%
!! AGGTGCCATTTGACATCTAT+TGG - Chr2:20053058-20053077 MsG0280007752.01.T01:CDS 40.0%
!! TATGAAATTGGTGGTGGATC+AGG - Chr2:20050852-20050871 MsG0280007752.01.T01:intron 40.0%
!!! TGCACTGCTTTGTGTTGTTT+TGG + Chr2:20053677-20053696 None:intergenic 40.0%
!!! TTTTTTGCTTTTGGCAGCCT+TGG - Chr2:20050043-20050062 MsG0280007752.01.T01:CDS 40.0%
AAACCAGACTTCCATCCATG+GGG + Chr2:20053375-20053394 None:intergenic 45.0%
AAATGGCACCTGTTTGCCTT+TGG + Chr2:20053049-20053068 None:intergenic 45.0%
ACTCTTACCAAGCAACCAGT+TGG + Chr2:20053759-20053778 None:intergenic 45.0%
ATCTCACACTGCTGATATGC+TGG + Chr2:20052912-20052931 None:intergenic 45.0%
ATGGCCCCTAAGTTACGAAT+AGG + Chr2:20051113-20051132 None:intergenic 45.0%
ATGTGGAGCAACAACCATGT+TGG - Chr2:20052359-20052378 MsG0280007752.01.T01:CDS 45.0%
ATGTGTCGGGACTTCTATGT+GGG - Chr2:20052284-20052303 MsG0280007752.01.T01:CDS 45.0%
ATTGTCCATGGTGTTTAGGC+AGG + Chr2:20050385-20050404 None:intergenic 45.0%
CAAAACTAGATCGACCACCA+AGG + Chr2:20052532-20052551 None:intergenic 45.0%
CAAACCAGACTTCCATCCAT+GGG + Chr2:20053376-20053395 None:intergenic 45.0%
CAGCCATATTCCGAAGTTCA+GGG - Chr2:20051595-20051614 MsG0280007752.01.T01:intron 45.0%
CAGGTATCTTCACATCTGGT+AGG + Chr2:20053919-20053938 None:intergenic 45.0%
CAGTTCTTCTTCCGCTTCTA+TGG + Chr2:20052729-20052748 None:intergenic 45.0%
CCTATGCAAATCGACACGTA+TGG - Chr2:20049271-20049290 MsG0280007752.01.T01:CDS 45.0%
CGAATCCCTAGAATGTGGTT+AGG + Chr2:20053456-20053475 None:intergenic 45.0%
CGACATTCTACCCTGAACTT+CGG + Chr2:20051608-20051627 None:intergenic 45.0%
CTACCAGATGTGAAGATACC+TGG - Chr2:20053917-20053936 MsG0280007752.01.T01:intron 45.0%
CTACCCTGAACTTCGGAATA+TGG + Chr2:20051601-20051620 None:intergenic 45.0%
CTTCATCCACACAAACCTAC+CGG + Chr2:20053412-20053431 None:intergenic 45.0%
CTTTGGGCAACATTGATCTG+GGG - Chr2:20052056-20052075 MsG0280007752.01.T01:intron 45.0%
GAAATTTGCAGTGCGCATGA+TGG + Chr2:20050091-20050110 None:intergenic 45.0%
GCCAGATAGACACAAGGTAA+GGG + Chr2:20054671-20054690 None:intergenic 45.0%
GGTTTGAGAAACAGCATGAC+CGG - Chr2:20053390-20053409 MsG0280007752.01.T01:intron 45.0%
GTGAGACTCGAATTGTATGC+AGG + Chr2:20050412-20050431 None:intergenic 45.0%
TCAAACCAGACTTCCATCCA+TGG + Chr2:20053377-20053396 None:intergenic 45.0%
TCACCAGGTATCTTCACATC+TGG + Chr2:20053923-20053942 None:intergenic 45.0%
TCCCTTACCTTGTGTCTATC+TGG - Chr2:20054667-20054686 MsG0280007752.01.T01:CDS 45.0%
TGGCAGATGGAAATATGTCG+GGG + Chr2:20053125-20053144 None:intergenic 45.0%
TGTGGAGCAACAACCATGTT+GGG - Chr2:20052360-20052379 MsG0280007752.01.T01:CDS 45.0%
TTGGTATGCTGAGTGGTTGA+TGG - Chr2:20052111-20052130 MsG0280007752.01.T01:intron 45.0%
TTTGCACCTCAGCAAGTGAA+GGG + Chr2:20051553-20051572 None:intergenic 45.0%
TTTGGGCAACATTGATCTGG+GGG - Chr2:20052057-20052076 MsG0280007752.01.T01:intron 45.0%
! ACACCCAGTTTGTTCTCCAA+AGG - Chr2:20053030-20053049 MsG0280007752.01.T01:CDS 45.0%
! ACATCTTTGGTAGCACCTCA+TGG + Chr2:20053871-20053890 None:intergenic 45.0%
! CGGGGCTTTTACTTCCTAAA+AGG + Chr2:20051885-20051904 None:intergenic 45.0%
! GTGATGATGTCGTAGGGAAA+AGG - Chr2:20052757-20052776 MsG0280007752.01.T01:intron 45.0%
! TTTTGCACCTCAGCAAGTGA+AGG + Chr2:20051554-20051573 None:intergenic 45.0%
!! AAGAGTATTAACTGCTGGCC+AGG - Chr2:20049528-20049547 MsG0280007752.01.T01:intron 45.0%
!! CCATACGTGTCGATTTGCAT+AGG + Chr2:20049274-20049293 None:intergenic 45.0%
!! AAAAAAATAAAAAACATATA+TGG + Chr2:20049879-20049898 None:intergenic 5.0%
!! AAAAAATAAAAAACATATAT+GGG + Chr2:20049878-20049897 None:intergenic 5.0%
AATGTCGTGATGCTGCTGAC+CGG - Chr2:20051621-20051640 MsG0280007752.01.T01:intron 50.0%
AATTACCCTGTAGTAGGGCC+TGG - Chr2:20051737-20051756 MsG0280007752.01.T01:intron 50.0%
AGCCAACATCTACGGGGTTT+GGG + Chr2:20053735-20053754 None:intergenic 50.0%
AGTTGGCAGCCAACATCTAC+GGG + Chr2:20053742-20053761 None:intergenic 50.0%
ATGTAGTCAGGGTCAAGTGC+CGG + Chr2:20049314-20049333 None:intergenic 50.0%
ATGTCGGCCAGATAGACACA+AGG + Chr2:20054677-20054696 None:intergenic 50.0%
ATGTCGTAGGGAAAAGGACC+GGG - Chr2:20052763-20052782 MsG0280007752.01.T01:intron 50.0%
ATGTTACCAGGCCCTACTAC+AGG + Chr2:20051746-20051765 None:intergenic 50.0%
CAAGATGCACCGAATGCTTG+TGG + Chr2:20052954-20052973 None:intergenic 50.0%
CACATATCAGGCGTGAGCTT+TGG - Chr2:20049834-20049853 MsG0280007752.01.T01:intron 50.0%
CAGAGAGTCAAATCTCCCCA+TGG - Chr2:20053357-20053376 MsG0280007752.01.T01:intron 50.0%
CAGTTGGCAGCCAACATCTA+CGG + Chr2:20053743-20053762 None:intergenic 50.0%
CGGGCAGGATAGTATACCTT+GGG - Chr2:20049746-20049765 MsG0280007752.01.T01:intron 50.0%
GAAAAGGACCGGGTCTTTCT+AGG - Chr2:20052773-20052792 MsG0280007752.01.T01:intron 50.0%
GACAGTTGGCCACAAGCATT+CGG - Chr2:20052942-20052961 MsG0280007752.01.T01:intron 50.0%
GAGAACAAACTGGGTGTGCA+GGG + Chr2:20053027-20053046 None:intergenic 50.0%
GAGTCAAATCTCCCCATGGA+TGG - Chr2:20053361-20053380 MsG0280007752.01.T01:intron 50.0%
GATGGCTTCAGCAATGGCAT+GGG + Chr2:20050073-20050092 None:intergenic 50.0%
GATGTCGTAGGGAAAAGGAC+CGG - Chr2:20052762-20052781 MsG0280007752.01.T01:intron 50.0%
GATGTGTCGGGACTTCTATG+TGG - Chr2:20052283-20052302 MsG0280007752.01.T01:CDS 50.0%
GCACTTGACCCTGACTACAT+TGG - Chr2:20049314-20049333 MsG0280007752.01.T01:CDS 50.0%
GCAGCCATATTCCGAAGTTC+AGG - Chr2:20051594-20051613 MsG0280007752.01.T01:intron 50.0%
GGATCAGGAACATGTGCCAA+GGG - Chr2:20050867-20050886 MsG0280007752.01.T01:intron 50.0%
GGCCAGATAGACACAAGGTA+AGG + Chr2:20054672-20054691 None:intergenic 50.0%
GGCCGACATTGTATGACTAG+TGG - Chr2:20054688-20054707 MsG0280007752.01.T01:CDS 50.0%
GGTCATACAATCCTACGACC+CGG - Chr2:20049292-20049311 MsG0280007752.01.T01:CDS 50.0%
GTAGTAGGGCCTGGTAACAT+AGG - Chr2:20051746-20051765 MsG0280007752.01.T01:intron 50.0%
GTATTAACTGCTGGCCAGGA+AGG - Chr2:20049532-20049551 MsG0280007752.01.T01:intron 50.0%
GTGTGCAGGGTTTCCTATAG+TGG + Chr2:20053014-20053033 None:intergenic 50.0%
TACCCAAACCCCGTAGATGT+TGG - Chr2:20053730-20053749 MsG0280007752.01.T01:intron 50.0%
TCTCTCCTTTACAGGGGATG+TGG - Chr2:20052342-20052361 MsG0280007752.01.T01:CDS 50.0%
TGAGAAACAGCATGACCGGT+AGG - Chr2:20053394-20053413 MsG0280007752.01.T01:intron 50.0%
TGATGGCTTCAGCAATGGCA+TGG + Chr2:20050074-20050093 None:intergenic 50.0%
TGGATCAGGAACATGTGCCA+AGG - Chr2:20050866-20050885 MsG0280007752.01.T01:intron 50.0%
TGTTACCAGGCCCTACTACA+GGG + Chr2:20051745-20051764 None:intergenic 50.0%
TTGCTCCACATCCCCTGTAA+AGG + Chr2:20052350-20052369 None:intergenic 50.0%
TTGGCCCTAAACACTTGTGC+TGG - Chr2:20053077-20053096 MsG0280007752.01.T01:intron 50.0%
TTGGGCAACATTGATCTGGG+GGG - Chr2:20052058-20052077 MsG0280007752.01.T01:intron 50.0%
! AAGGTTAGGTGGCACTGGAA+TGG - Chr2:20049551-20049570 MsG0280007752.01.T01:intron 50.0%
! GATTAGCCCTTCACTTGCTG+AGG - Chr2:20051544-20051563 MsG0280007752.01.T01:CDS 50.0%
! TGCAGCTGCTTTCTTCACAG+AGG + Chr2:20052612-20052631 None:intergenic 50.0%
!! AGTGGTTGATGGTGCGTGTT+TGG - Chr2:20052122-20052141 MsG0280007752.01.T01:intron 50.0%
!! CACAAGCATTCGGTGCATCT+TGG - Chr2:20052952-20052971 MsG0280007752.01.T01:intron 50.0%
!! GTCGGGGATTAGCTTCTCAA+AGG + Chr2:20053109-20053128 None:intergenic 50.0%
AACTGCTGGCCAGGAAGGTT+AGG - Chr2:20049537-20049556 MsG0280007752.01.T01:intron 55.0%
AGATGGCAAGGTCAGCAACG+TGG + Chr2:20054155-20054174 None:intergenic 55.0%
CAGCCAACATCTACGGGGTT+TGG + Chr2:20053736-20053755 None:intergenic 55.0%
CTAGCAGGCTGTTTGCCTTC+TGG - Chr2:20051200-20051219 MsG0280007752.01.T01:intron 55.0%
GCAACATTGATCTGGGGGGA+GGG - Chr2:20052062-20052081 MsG0280007752.01.T01:intron 55.0%
GCAATGGCATGGGCATACCA+AGG + Chr2:20050063-20050082 None:intergenic 55.0%
GCATGACCGGTAGGTTTGTG+TGG - Chr2:20053403-20053422 MsG0280007752.01.T01:intron 55.0%
GCGCATGATGGCTTCAGCAA+TGG + Chr2:20050079-20050098 None:intergenic 55.0%
GCGGGCAGGATAGTATACCT+TGG - Chr2:20049745-20049764 MsG0280007752.01.T01:intron 55.0%
GGAGAACAAACTGGGTGTGC+AGG + Chr2:20053028-20053047 None:intergenic 55.0%
GTTGGCAGCCAACATCTACG+GGG + Chr2:20053741-20053760 None:intergenic 55.0%
TCTCCCCATGGATGGAAGTC+TGG - Chr2:20053369-20053388 MsG0280007752.01.T01:intron 55.0%
TGTAGTCAGGGTCAAGTGCC+GGG + Chr2:20049313-20049332 None:intergenic 55.0%
TTGGCTGCCAACTGGTTGCT+TGG - Chr2:20053749-20053768 MsG0280007752.01.T01:intron 55.0%
! CGTAGATGTTGGCTGCCAAC+TGG - Chr2:20053741-20053760 MsG0280007752.01.T01:intron 55.0%
ACCAATGGGGCTCGTTCACC+AGG + Chr2:20053938-20053957 None:intergenic 60.0%
ACCTGGTGAACGAGCCCCAT+TGG - Chr2:20053934-20053953 MsG0280007752.01.T01:intron 60.0%
ATGCTGCTGACCGGAGTGGA+TGG - Chr2:20051630-20051649 MsG0280007752.01.T01:intron 60.0%
CCAGGAAGGTTAGGTGGCAC+TGG - Chr2:20049546-20049565 MsG0280007752.01.T01:intron 60.0%
CCAGTGCCACCTAACCTTCC+TGG + Chr2:20049549-20049568 None:intergenic 60.0%
GCATCCTACCCCATCCACTC+CGG + Chr2:20051643-20051662 None:intergenic 60.0%
GGCAACATTGATCTGGGGGG+AGG - Chr2:20052061-20052080 MsG0280007752.01.T01:intron 60.0%
TGCTGCTGACCGGAGTGGAT+GGG - Chr2:20051631-20051650 MsG0280007752.01.T01:intron 60.0%
TGCTGGCCAGGAAGGTTAGG+TGG - Chr2:20049540-20049559 MsG0280007752.01.T01:intron 60.0%
CGTGATGCTGCTGACCGGAG+TGG - Chr2:20051626-20051645 MsG0280007752.01.T01:intron 65.0%
CTGACCGGAGTGGATGGGGT+AGG - Chr2:20051636-20051655 MsG0280007752.01.T01:intron 65.0%
GCTGCTGACCGGAGTGGATG+GGG - Chr2:20051632-20051651 MsG0280007752.01.T01:intron 65.0%
!! AGGGTCAAGTGCCGGGTCGT+AGG + Chr2:20049306-20049325 None:intergenic 65.0%
CTGGGGGGAGGGACGAACTG+AGG - Chr2:20052073-20052092 MsG0280007752.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr2 gene 20049219 20054707 20049219 ID=MsG0280007752.01;Name=MsG0280007752.01
Chr2 mRNA 20049219 20054707 20049219 ID=MsG0280007752.01.T01;Parent=MsG0280007752.01;Name=MsG0280007752.01.T01;_AED=0.49;_eAED=0.49;_QI=0|0.62|0.55|1|0.87|1|9|0|333
Chr2 exon 20054549 20054707 20054549 ID=MsG0280007752.01.T01:exon:10342;Parent=MsG0280007752.01.T01
Chr2 exon 20053801 20053866 20053801 ID=MsG0280007752.01.T01:exon:10341;Parent=MsG0280007752.01.T01
Chr2 exon 20052977 20053077 20052977 ID=MsG0280007752.01.T01:exon:10340;Parent=MsG0280007752.01.T01
Chr2 exon 20052273 20052391 20052273 ID=MsG0280007752.01.T01:exon:10339;Parent=MsG0280007752.01.T01
Chr2 exon 20051530 20051570 20051530 ID=MsG0280007752.01.T01:exon:10338;Parent=MsG0280007752.01.T01
Chr2 exon 20050515 20050603 20050515 ID=MsG0280007752.01.T01:exon:10337;Parent=MsG0280007752.01.T01
Chr2 exon 20050164 20050332 20050164 ID=MsG0280007752.01.T01:exon:10336;Parent=MsG0280007752.01.T01
Chr2 exon 20049959 20050075 20049959 ID=MsG0280007752.01.T01:exon:10335;Parent=MsG0280007752.01.T01
Chr2 exon 20049219 20049359 20049219 ID=MsG0280007752.01.T01:exon:10334;Parent=MsG0280007752.01.T01
Chr2 CDS 20054549 20054707 20054549 ID=MsG0280007752.01.T01:cds;Parent=MsG0280007752.01.T01
Chr2 CDS 20053801 20053866 20053801 ID=MsG0280007752.01.T01:cds;Parent=MsG0280007752.01.T01
Chr2 CDS 20052977 20053077 20052977 ID=MsG0280007752.01.T01:cds;Parent=MsG0280007752.01.T01
Chr2 CDS 20052273 20052391 20052273 ID=MsG0280007752.01.T01:cds;Parent=MsG0280007752.01.T01
Chr2 CDS 20051530 20051570 20051530 ID=MsG0280007752.01.T01:cds;Parent=MsG0280007752.01.T01
Chr2 CDS 20050515 20050603 20050515 ID=MsG0280007752.01.T01:cds;Parent=MsG0280007752.01.T01
Chr2 CDS 20050164 20050332 20050164 ID=MsG0280007752.01.T01:cds;Parent=MsG0280007752.01.T01
Chr2 CDS 20049959 20050075 20049959 ID=MsG0280007752.01.T01:cds;Parent=MsG0280007752.01.T01
Chr2 CDS 20049219 20049359 20049219 ID=MsG0280007752.01.T01:cds;Parent=MsG0280007752.01.T01
Gene Sequence

>MsG0280007752.01.T01

ATGAGCAAAAATAGAGGAAACAGAGAAACAGAAGAAAAACAGAGCAAACAATCCTATGCAAATCGACACGTATGGTCATACAATCCTACGACCCGGCACTTGACCCTGACTACATTGGTTGTCTGTATGATGATATTTATATTAACTGCAGACAGAATGCCTTGGTATGCCCATGCCATTGCTGAAGCCATCATGCGCACTGCAAATTTCTCTGTTCCTCTAAAAATTTATGAAATTGGTGGTGGATCAGGAACATGTGCCAAGGGTATAATGGATTACATAATGTTGAATGCTCCTCCAAAAGTTTATAACAGTATGACTTACACCTCAGTTGAGATTAGCCCTTCACTTGCTGAGGTGCAAAAAGAAACAGTTGGCGAAGTGCGCAGCCATATTCCGAAGTTCAGGGTAGAATGTCGTGATGCTGCTGACCGGAGTGGATGGGGGGATGTGGAGCAACAACCATGTTGGGTAATAATGCTCGAGGTACTTGATAATCTTCCGCATGATGTTGTCTATTCAGAGAGTCAAATCTCCCCATGGATGGAAGTCTGGTTTGAGAAACAGCATGACCGAGAAACACTCGGTGAGTTATACAAGCCATTGCAAGATTCACTTGTTACACGTTGTGTTGAGATCATGGACTTGGATAAAACCAAAACAACACAAAGCAGTGCAGCATCAATACTTAAAAGTATTTGGTCTAAAGTTTACCCAAACCCCGTAGATGTTGGCTGCCAACTGAAATTACTTGATGTTCTCCATGAGGTGCTACCAAAGATGTCTTTGATTGCTTCTGATTTCAGCTACCTACCAGATGTGAAGATACCTGGTGAACGAGCCCCATTGGTTTCAACTAAAAAAGATGGGAGCAGCACAGATTACCAAGATTATATGCAGGCTAAGGTTTTGTTTAGCACTGATTTATTTCCTTTTCAATCTACACTCCTCATTATTATTGTCCCTTACCTTGTGTCTATCTGGCCGACATTGTATGACTAG
Protein sequence

>MsG0280007752.01.T01

MSKNRGNRETEEKQSKQSYANRHVWSYNPTTRHLTLTTLVVCMMIFILTADRMPWYAHAIAEAIMRTANFSVPLKIYEIGGGSGTCAKGIMDYIMLNAPPKVYNSMTYTSVEISPSLAEVQKETVGEVRSHIPKFRVECRDAADRSGWGDVEQQPCWVIMLEVLDNLPHDVVYSESQISPWMEVWFEKQHDRETLGELYKPLQDSLVTRCVEIMDLDKTKTTQSSAASILKSIWSKVYPNPVDVGCQLKLLDVLHEVLPKMSLIASDFSYLPDVKIPGERAPLVSTKKDGSSTDYQDYMQAKVLFSTDLFPFQSTLLIIIVPYLVSIWPTLYD*