Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280007868.01.T01 | XP_003594774.2 | 97.05 | 339 | 6 | 1 | 7 | 345 | 28 | 362 | 0 | 674 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280007868.01.T01 | Q03467 | 75.882 | 340 | 80 | 2 | 7 | 345 | 32 | 370 | 0 | 527 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280007868.01.T01 | G7IG03 | 97.050 | 339 | 6 | 1 | 7 | 345 | 28 | 362 | 0.0 | 674 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0280007868.01 | MsG0280011256.01 | 0.817706 | 2.868759e-52 | 2.104621e-49 |
MsG0280007868.01 | MsG0780040442.01 | 0.804201 | 2.420319e-49 | 1.240306e-46 |
MsG0280007868.01 | MsG0880042832.01 | 0.803031 | 4.233160e-49 | 2.105103e-46 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280007868.01.T01 | MTR_2g034470 | 97.050 | 339 | 6 | 1 | 7 | 345 | 28 | 362 | 0.0 | 674 |
MsG0280007868.01.T01 | MTR_2g034470 | 96.979 | 331 | 6 | 1 | 15 | 345 | 1 | 327 | 0.0 | 654 |
MsG0280007868.01.T01 | MTR_2g034440 | 93.987 | 316 | 18 | 1 | 7 | 321 | 20 | 335 | 0.0 | 603 |
MsG0280007868.01.T01 | MTR_2g034480 | 75.942 | 345 | 82 | 1 | 1 | 345 | 19 | 362 | 0.0 | 537 |
MsG0280007868.01.T01 | MTR_4g076570 | 55.414 | 314 | 136 | 3 | 9 | 320 | 22 | 333 | 3.46e-119 | 348 |
MsG0280007868.01.T01 | MTR_1g052430 | 54.545 | 319 | 138 | 4 | 4 | 317 | 24 | 340 | 1.00e-117 | 346 |
MsG0280007868.01.T01 | MTR_4g076470 | 53.185 | 314 | 138 | 4 | 9 | 321 | 23 | 328 | 3.21e-109 | 322 |
MsG0280007868.01.T01 | MTR_4g076255 | 53.605 | 319 | 136 | 7 | 6 | 321 | 21 | 330 | 2.68e-108 | 320 |
MsG0280007868.01.T01 | MTR_4g076440 | 51.274 | 314 | 144 | 4 | 9 | 321 | 23 | 328 | 1.84e-103 | 307 |
MsG0280007868.01.T01 | MTR_4g076490 | 49.704 | 338 | 157 | 6 | 7 | 342 | 95 | 421 | 2.58e-103 | 310 |
MsG0280007868.01.T01 | MTR_4g076430 | 50.955 | 314 | 145 | 4 | 9 | 321 | 23 | 328 | 5.73e-102 | 303 |
MsG0280007868.01.T01 | MTR_4g076500 | 50.163 | 307 | 143 | 5 | 9 | 311 | 78 | 378 | 4.10e-100 | 301 |
MsG0280007868.01.T01 | MTR_6g088885 | 38.110 | 328 | 191 | 7 | 6 | 324 | 24 | 348 | 4.83e-73 | 235 |
MsG0280007868.01.T01 | MTR_7g081350 | 40.635 | 315 | 177 | 6 | 9 | 319 | 27 | 335 | 1.49e-72 | 228 |
MsG0280007868.01.T01 | MTR_3g080410 | 39.514 | 329 | 186 | 8 | 6 | 323 | 23 | 349 | 2.55e-69 | 221 |
MsG0280007868.01.T01 | MTR_5g085580 | 37.838 | 333 | 194 | 8 | 9 | 330 | 25 | 355 | 2.66e-67 | 219 |
MsG0280007868.01.T01 | MTR_8g012400 | 35.629 | 334 | 201 | 8 | 3 | 324 | 23 | 354 | 2.69e-66 | 216 |
MsG0280007868.01.T01 | MTR_4g069940 | 37.576 | 330 | 195 | 7 | 2 | 322 | 22 | 349 | 3.27e-66 | 216 |
MsG0280007868.01.T01 | MTR_1g056640 | 38.080 | 323 | 188 | 8 | 4 | 317 | 34 | 353 | 4.10e-66 | 216 |
MsG0280007868.01.T01 | MTR_7g053500 | 34.954 | 329 | 200 | 8 | 8 | 324 | 25 | 351 | 9.51e-65 | 212 |
MsG0280007868.01.T01 | MTR_4g052970 | 36.963 | 349 | 199 | 9 | 6 | 345 | 26 | 362 | 1.36e-64 | 209 |
MsG0280007868.01.T01 | MTR_7g081370 | 38.462 | 312 | 175 | 5 | 9 | 319 | 28 | 323 | 3.11e-64 | 207 |
MsG0280007868.01.T01 | MTR_4g088155 | 36.499 | 337 | 196 | 10 | 3 | 324 | 17 | 350 | 4.34e-64 | 210 |
MsG0280007868.01.T01 | MTR_4g010200 | 36.957 | 322 | 194 | 6 | 10 | 323 | 34 | 354 | 1.09e-63 | 207 |
MsG0280007868.01.T01 | MTR_3g116510 | 34.954 | 329 | 203 | 7 | 2 | 321 | 21 | 347 | 1.20e-62 | 206 |
MsG0280007868.01.T01 | MTR_2g086530 | 35.542 | 332 | 194 | 11 | 6 | 325 | 5 | 328 | 1.51e-60 | 198 |
MsG0280007868.01.T01 | MTR_2g086530 | 35.503 | 338 | 197 | 12 | 1 | 325 | 20 | 349 | 2.07e-60 | 199 |
MsG0280007868.01.T01 | MTR_1g077990 | 36.646 | 322 | 193 | 8 | 9 | 322 | 31 | 349 | 2.32e-59 | 196 |
MsG0280007868.01.T01 | MTR_4g084480 | 35.583 | 326 | 198 | 8 | 7 | 323 | 30 | 352 | 3.74e-59 | 196 |
MsG0280007868.01.T01 | MTR_4g084480 | 35.802 | 324 | 196 | 8 | 7 | 321 | 23 | 343 | 3.95e-59 | 195 |
MsG0280007868.01.T01 | MTR_4g084480 | 35.583 | 326 | 198 | 8 | 7 | 323 | 30 | 352 | 5.28e-59 | 195 |
MsG0280007868.01.T01 | MTR_4g114850 | 33.642 | 324 | 202 | 8 | 10 | 323 | 27 | 347 | 1.23e-58 | 193 |
MsG0280007868.01.T01 | MTR_4g114850 | 33.642 | 324 | 202 | 8 | 10 | 323 | 27 | 347 | 1.84e-58 | 193 |
MsG0280007868.01.T01 | MTR_4g114850 | 33.437 | 323 | 204 | 7 | 10 | 323 | 27 | 347 | 2.14e-58 | 193 |
MsG0280007868.01.T01 | MTR_1g007810 | 39.062 | 320 | 177 | 11 | 9 | 317 | 16 | 328 | 2.85e-58 | 192 |
MsG0280007868.01.T01 | MTR_1g022160 | 34.877 | 324 | 199 | 8 | 9 | 322 | 24 | 345 | 4.09e-57 | 191 |
MsG0280007868.01.T01 | MTR_1g022160 | 34.877 | 324 | 199 | 8 | 9 | 322 | 24 | 345 | 2.25e-56 | 191 |
MsG0280007868.01.T01 | MTR_1g022160 | 34.877 | 324 | 199 | 8 | 9 | 322 | 24 | 345 | 2.77e-56 | 191 |
MsG0280007868.01.T01 | MTR_4g124440 | 35.110 | 319 | 198 | 5 | 13 | 323 | 32 | 349 | 3.24e-56 | 191 |
MsG0280007868.01.T01 | MTR_1g022160 | 34.877 | 324 | 199 | 8 | 9 | 322 | 24 | 345 | 3.28e-56 | 190 |
MsG0280007868.01.T01 | MTR_1g031900 | 36.890 | 328 | 194 | 7 | 7 | 323 | 22 | 347 | 6.47e-56 | 190 |
MsG0280007868.01.T01 | MTR_1g031900 | 36.890 | 328 | 194 | 7 | 7 | 323 | 22 | 347 | 7.71e-56 | 189 |
MsG0280007868.01.T01 | MTR_7g026340 | 37.267 | 322 | 184 | 13 | 9 | 320 | 23 | 336 | 3.48e-55 | 187 |
MsG0280007868.01.T01 | MTR_3g065460 | 37.309 | 327 | 192 | 7 | 9 | 324 | 24 | 348 | 1.01e-54 | 186 |
MsG0280007868.01.T01 | MTR_5g078200 | 37.920 | 327 | 190 | 7 | 9 | 324 | 23 | 347 | 4.92e-54 | 187 |
MsG0280007868.01.T01 | MTR_3g083580 | 33.234 | 334 | 199 | 7 | 6 | 322 | 23 | 349 | 1.29e-53 | 184 |
MsG0280007868.01.T01 | MTR_8g102340 | 33.819 | 343 | 179 | 11 | 5 | 338 | 24 | 327 | 2.29e-53 | 182 |
MsG0280007868.01.T01 | MTR_8g085720 | 32.955 | 352 | 220 | 7 | 1 | 338 | 18 | 367 | 3.86e-53 | 182 |
MsG0280007868.01.T01 | MTR_2g027560 | 34.268 | 321 | 200 | 6 | 7 | 317 | 26 | 345 | 5.36e-53 | 182 |
MsG0280007868.01.T01 | MTR_4g132280 | 34.139 | 331 | 205 | 7 | 4 | 323 | 40 | 368 | 9.19e-53 | 182 |
MsG0280007868.01.T01 | MTR_5g078200 | 37.975 | 316 | 183 | 7 | 20 | 324 | 1 | 314 | 1.90e-52 | 183 |
MsG0280007868.01.T01 | MTR_8g092070 | 31.790 | 324 | 212 | 5 | 9 | 324 | 34 | 356 | 8.07e-52 | 181 |
MsG0280007868.01.T01 | MTR_4g112025 | 32.931 | 331 | 211 | 6 | 3 | 323 | 25 | 354 | 2.92e-51 | 178 |
MsG0280007868.01.T01 | MTR_7g085390 | 33.435 | 329 | 203 | 7 | 9 | 325 | 26 | 350 | 3.50e-51 | 177 |
MsG0280007868.01.T01 | MTR_2g019345 | 34.146 | 328 | 205 | 8 | 1 | 320 | 16 | 340 | 5.34e-51 | 174 |
MsG0280007868.01.T01 | MTR_1g010120 | 34.385 | 317 | 199 | 6 | 9 | 317 | 26 | 341 | 3.70e-50 | 174 |
MsG0280007868.01.T01 | MTR_8g012400 | 34.545 | 275 | 166 | 8 | 62 | 324 | 2 | 274 | 2.21e-49 | 170 |
MsG0280007868.01.T01 | MTR_6g032820 | 32.919 | 322 | 202 | 6 | 9 | 318 | 26 | 345 | 9.49e-49 | 169 |
MsG0280007868.01.T01 | MTR_1g053320 | 31.832 | 333 | 217 | 6 | 1 | 323 | 22 | 354 | 1.65e-47 | 167 |
MsG0280007868.01.T01 | MTR_7g053500 | 33.818 | 275 | 168 | 8 | 62 | 324 | 2 | 274 | 1.43e-46 | 162 |
MsG0280007868.01.T01 | MTR_3g095050 | 31.804 | 327 | 206 | 8 | 9 | 324 | 34 | 354 | 2.47e-46 | 164 |
MsG0280007868.01.T01 | MTR_4g083500 | 35.455 | 330 | 196 | 12 | 2 | 320 | 37 | 360 | 2.81e-45 | 162 |
MsG0280007868.01.T01 | MTR_3g108600 | 33.228 | 316 | 185 | 6 | 9 | 317 | 31 | 327 | 9.62e-45 | 159 |
MsG0280007868.01.T01 | MTR_3g031770 | 31.013 | 316 | 209 | 6 | 9 | 317 | 27 | 340 | 1.32e-43 | 157 |
MsG0280007868.01.T01 | MTR_5g081720 | 33.227 | 313 | 187 | 13 | 35 | 337 | 63 | 363 | 7.86e-37 | 136 |
MsG0280007868.01.T01 | MTR_4g134280 | 35.065 | 231 | 141 | 5 | 96 | 319 | 2 | 230 | 3.22e-36 | 135 |
MsG0280007868.01.T01 | MTR_3g116510 | 35.047 | 214 | 129 | 6 | 117 | 321 | 1 | 213 | 1.11e-35 | 132 |
MsG0280007868.01.T01 | MTR_4g036680 | 48.936 | 94 | 46 | 2 | 226 | 317 | 80 | 173 | 5.52e-24 | 98.6 |
MsG0280007868.01.T01 | MTR_4g036680 | 65.672 | 67 | 22 | 1 | 6 | 71 | 18 | 84 | 1.31e-22 | 94.7 |
MsG0280007868.01.T01 | MTR_4g036775 | 48.936 | 94 | 46 | 2 | 226 | 317 | 80 | 173 | 2.60e-23 | 96.7 |
MsG0280007868.01.T01 | MTR_4g036775 | 64.286 | 70 | 24 | 1 | 3 | 71 | 15 | 84 | 1.50e-22 | 94.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280007868.01.T01 | AT4G16260 | 61.538 | 325 | 117 | 4 | 5 | 326 | 20 | 339 | 1.00e-146 | 418 |
MsG0280007868.01.T01 | AT4G16260 | 61.587 | 315 | 113 | 4 | 15 | 326 | 1 | 310 | 1.56e-140 | 401 |
MsG0280007868.01.T01 | AT3G57270 | 51.250 | 320 | 150 | 3 | 5 | 321 | 23 | 339 | 1.45e-110 | 326 |
MsG0280007868.01.T01 | AT3G57240 | 52.012 | 323 | 144 | 6 | 1 | 321 | 27 | 340 | 1.22e-105 | 313 |
MsG0280007868.01.T01 | AT3G57260 | 48.137 | 322 | 157 | 4 | 2 | 321 | 25 | 338 | 1.33e-101 | 303 |
MsG0280007868.01.T01 | AT3G57260 | 48.137 | 322 | 157 | 4 | 2 | 321 | 41 | 354 | 2.04e-101 | 303 |
MsG0280007868.01.T01 | AT5G56590 | 38.602 | 329 | 190 | 7 | 6 | 324 | 23 | 349 | 6.15e-75 | 240 |
MsG0280007868.01.T01 | AT2G16230 | 39.939 | 328 | 186 | 7 | 3 | 321 | 19 | 344 | 8.25e-71 | 229 |
MsG0280007868.01.T01 | AT5G20390 | 38.750 | 320 | 183 | 7 | 2 | 315 | 26 | 338 | 1.80e-70 | 223 |
MsG0280007868.01.T01 | AT4G29360 | 40.059 | 337 | 190 | 7 | 6 | 333 | 24 | 357 | 1.55e-67 | 221 |
MsG0280007868.01.T01 | AT4G29360 | 40.059 | 337 | 190 | 7 | 6 | 333 | 34 | 367 | 1.85e-67 | 221 |
MsG0280007868.01.T01 | AT5G20340 | 38.558 | 319 | 185 | 6 | 2 | 315 | 36 | 348 | 4.01e-67 | 215 |
MsG0280007868.01.T01 | AT2G26600 | 35.826 | 321 | 195 | 7 | 10 | 321 | 35 | 353 | 2.95e-66 | 214 |
MsG0280007868.01.T01 | AT4G34480 | 38.720 | 328 | 190 | 7 | 3 | 321 | 20 | 345 | 2.95e-65 | 210 |
MsG0280007868.01.T01 | AT5G20330 | 38.558 | 319 | 185 | 6 | 2 | 315 | 27 | 339 | 3.88e-65 | 210 |
MsG0280007868.01.T01 | AT2G05790 | 36.310 | 336 | 201 | 8 | 7 | 331 | 23 | 356 | 6.65e-65 | 213 |
MsG0280007868.01.T01 | AT1G77790 | 38.318 | 321 | 183 | 7 | 5 | 317 | 26 | 339 | 6.44e-64 | 206 |
MsG0280007868.01.T01 | AT5G55180 | 37.423 | 326 | 191 | 8 | 9 | 324 | 27 | 349 | 1.12e-63 | 209 |
MsG0280007868.01.T01 | AT5G55180 | 37.423 | 326 | 191 | 8 | 9 | 324 | 27 | 349 | 1.19e-63 | 209 |
MsG0280007868.01.T01 | AT5G42720 | 35.821 | 335 | 205 | 7 | 2 | 327 | 19 | 352 | 1.23e-63 | 209 |
MsG0280007868.01.T01 | AT3G07320 | 34.036 | 332 | 203 | 9 | 10 | 328 | 26 | 354 | 1.24e-63 | 209 |
MsG0280007868.01.T01 | AT4G34480 | 38.720 | 328 | 190 | 7 | 3 | 321 | 20 | 345 | 1.31e-63 | 210 |
MsG0280007868.01.T01 | AT4G26830 | 35.484 | 341 | 202 | 9 | 3 | 331 | 23 | 357 | 4.48e-63 | 207 |
MsG0280007868.01.T01 | AT4G26830 | 35.821 | 335 | 197 | 9 | 9 | 331 | 25 | 353 | 5.27e-63 | 207 |
MsG0280007868.01.T01 | AT2G27500 | 36.061 | 330 | 198 | 9 | 6 | 325 | 26 | 352 | 5.88e-63 | 205 |
MsG0280007868.01.T01 | AT2G27500 | 36.061 | 330 | 198 | 9 | 6 | 325 | 26 | 352 | 9.39e-63 | 205 |
MsG0280007868.01.T01 | AT1G32860 | 35.385 | 325 | 196 | 8 | 8 | 321 | 28 | 349 | 2.52e-62 | 205 |
MsG0280007868.01.T01 | AT3G15800 | 35.494 | 324 | 197 | 8 | 10 | 323 | 44 | 365 | 7.62e-61 | 200 |
MsG0280007868.01.T01 | AT1G33220 | 37.748 | 302 | 177 | 6 | 2 | 298 | 27 | 322 | 2.61e-60 | 197 |
MsG0280007868.01.T01 | AT5G20560 | 36.688 | 308 | 185 | 6 | 9 | 311 | 34 | 336 | 4.42e-59 | 194 |
MsG0280007868.01.T01 | AT5G42100 | 38.298 | 329 | 186 | 11 | 7 | 322 | 25 | 349 | 5.65e-59 | 196 |
MsG0280007868.01.T01 | AT5G42100 | 38.298 | 329 | 186 | 11 | 7 | 322 | 25 | 349 | 6.66e-59 | 196 |
MsG0280007868.01.T01 | AT2G01630 | 36.503 | 326 | 194 | 6 | 9 | 323 | 23 | 346 | 2.65e-58 | 193 |
MsG0280007868.01.T01 | AT2G01630 | 36.503 | 326 | 194 | 6 | 9 | 323 | 23 | 346 | 1.15e-57 | 193 |
MsG0280007868.01.T01 | AT3G61810 | 34.969 | 326 | 192 | 7 | 9 | 322 | 55 | 372 | 1.75e-57 | 191 |
MsG0280007868.01.T01 | AT1G77780 | 35.577 | 312 | 191 | 7 | 10 | 317 | 25 | 330 | 5.86e-57 | 189 |
MsG0280007868.01.T01 | AT2G01630 | 36.503 | 326 | 194 | 6 | 9 | 323 | 23 | 346 | 6.75e-57 | 192 |
MsG0280007868.01.T01 | AT4G14080 | 33.233 | 331 | 206 | 9 | 6 | 324 | 39 | 366 | 4.20e-56 | 190 |
MsG0280007868.01.T01 | AT4G18340 | 35.650 | 331 | 193 | 9 | 4 | 321 | 29 | 352 | 6.26e-56 | 187 |
MsG0280007868.01.T01 | AT3G23770 | 33.239 | 355 | 220 | 10 | 6 | 345 | 34 | 386 | 6.27e-56 | 189 |
MsG0280007868.01.T01 | AT4G18340 | 35.542 | 332 | 194 | 9 | 4 | 322 | 29 | 353 | 7.59e-56 | 187 |
MsG0280007868.01.T01 | AT1G30080 | 34.146 | 328 | 206 | 7 | 1 | 320 | 28 | 353 | 1.02e-55 | 186 |
MsG0280007868.01.T01 | AT1G30080 | 34.146 | 328 | 206 | 7 | 1 | 320 | 28 | 353 | 2.49e-55 | 186 |
MsG0280007868.01.T01 | AT1G66250 | 35.714 | 322 | 195 | 6 | 6 | 317 | 29 | 348 | 5.41e-55 | 187 |
MsG0280007868.01.T01 | AT5G18220 | 34.154 | 325 | 203 | 6 | 7 | 323 | 28 | 349 | 2.58e-54 | 185 |
MsG0280007868.01.T01 | AT1G11820 | 33.033 | 333 | 209 | 7 | 9 | 329 | 44 | 374 | 1.29e-53 | 181 |
MsG0280007868.01.T01 | AT5G58090 | 33.437 | 323 | 206 | 5 | 3 | 317 | 16 | 337 | 2.54e-53 | 182 |
MsG0280007868.01.T01 | AT3G04010 | 34.663 | 326 | 200 | 7 | 9 | 324 | 33 | 355 | 1.04e-52 | 181 |
MsG0280007868.01.T01 | AT1G11820 | 33.333 | 327 | 205 | 6 | 9 | 324 | 44 | 368 | 2.80e-52 | 180 |
MsG0280007868.01.T01 | AT5G24318 | 35.061 | 328 | 189 | 11 | 7 | 320 | 28 | 345 | 3.43e-52 | 177 |
MsG0280007868.01.T01 | AT1G11820 | 33.333 | 327 | 205 | 6 | 9 | 324 | 44 | 368 | 5.31e-52 | 180 |
MsG0280007868.01.T01 | AT4G31140 | 34.069 | 317 | 200 | 5 | 9 | 317 | 27 | 342 | 1.54e-51 | 178 |
MsG0280007868.01.T01 | AT5G24318 | 35.152 | 330 | 186 | 12 | 7 | 320 | 28 | 345 | 3.69e-51 | 176 |
MsG0280007868.01.T01 | AT5G24318 | 35.061 | 328 | 189 | 11 | 7 | 320 | 28 | 345 | 4.08e-51 | 176 |
MsG0280007868.01.T01 | AT5G58480 | 32.716 | 324 | 209 | 5 | 9 | 324 | 26 | 348 | 1.58e-50 | 175 |
MsG0280007868.01.T01 | AT2G19440 | 33.436 | 326 | 204 | 8 | 9 | 324 | 21 | 343 | 3.82e-50 | 174 |
MsG0280007868.01.T01 | AT2G19440 | 33.436 | 326 | 204 | 8 | 9 | 324 | 21 | 343 | 3.82e-50 | 174 |
MsG0280007868.01.T01 | AT2G26600 | 36.398 | 261 | 155 | 7 | 70 | 321 | 1 | 259 | 5.16e-50 | 169 |
MsG0280007868.01.T01 | AT3G24330 | 32.229 | 332 | 214 | 7 | 3 | 324 | 33 | 363 | 1.32e-49 | 173 |
MsG0280007868.01.T01 | AT2G27500 | 35.145 | 276 | 168 | 7 | 59 | 325 | 1 | 274 | 1.33e-49 | 169 |
MsG0280007868.01.T01 | AT3G13560 | 33.951 | 324 | 201 | 7 | 6 | 318 | 23 | 344 | 5.19e-49 | 172 |
MsG0280007868.01.T01 | AT3G13560 | 33.951 | 324 | 201 | 7 | 6 | 318 | 23 | 344 | 5.19e-49 | 172 |
MsG0280007868.01.T01 | AT3G13560 | 33.951 | 324 | 201 | 7 | 6 | 318 | 23 | 344 | 5.19e-49 | 172 |
MsG0280007868.01.T01 | AT3G13560 | 33.951 | 324 | 201 | 7 | 6 | 318 | 23 | 344 | 5.19e-49 | 172 |
MsG0280007868.01.T01 | AT3G13560 | 33.951 | 324 | 201 | 7 | 6 | 318 | 23 | 344 | 5.19e-49 | 172 |
MsG0280007868.01.T01 | AT4G17180 | 33.750 | 320 | 196 | 8 | 7 | 317 | 23 | 335 | 8.80e-49 | 171 |
MsG0280007868.01.T01 | AT1G64760 | 32.822 | 326 | 206 | 8 | 9 | 324 | 25 | 347 | 9.24e-49 | 171 |
MsG0280007868.01.T01 | AT1G64760 | 32.822 | 326 | 206 | 8 | 9 | 324 | 25 | 347 | 9.24e-49 | 171 |
MsG0280007868.01.T01 | AT3G55430 | 36.000 | 325 | 190 | 13 | 7 | 321 | 27 | 343 | 1.90e-47 | 166 |
MsG0280007868.01.T01 | AT3G46570 | 34.650 | 329 | 196 | 13 | 4 | 320 | 22 | 343 | 7.14e-45 | 157 |
MsG0280007868.01.T01 | AT5G64790 | 30.341 | 323 | 216 | 6 | 10 | 324 | 29 | 350 | 1.74e-44 | 159 |
MsG0280007868.01.T01 | AT5G20870 | 32.209 | 326 | 201 | 9 | 13 | 321 | 34 | 356 | 1.41e-43 | 157 |
MsG0280007868.01.T01 | AT2G39640 | 32.515 | 326 | 204 | 12 | 2 | 320 | 23 | 339 | 3.72e-41 | 151 |
MsG0280007868.01.T01 | AT3G55780 | 32.024 | 331 | 201 | 13 | 9 | 322 | 31 | 354 | 4.02e-39 | 142 |
MsG0280007868.01.T01 | AT4G34480 | 38.462 | 234 | 133 | 7 | 97 | 321 | 3 | 234 | 5.17e-36 | 135 |
MsG0280007868.01.T01 | AT5G24318 | 34.112 | 214 | 120 | 8 | 120 | 320 | 1 | 206 | 1.28e-26 | 107 |
Find 69 sgRNAs with CRISPR-Local
Find 78 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCCATTGAAACTTATATATT+TGG | 0.075979 | 2:-22042722 | MsG0280007868.01.T01:CDS |
ACAAAGCATCAAATAAATTT+TGG | 0.183195 | 2:+22042918 | None:intergenic |
CCTGAGTTAGAGAAACATTT+TGG | 0.189107 | 2:-22042674 | MsG0280007868.01.T01:CDS |
ATTTGGATTTGAAGGGAAAA+TGG | 0.227616 | 2:-22042618 | MsG0280007868.01.T01:CDS |
AAGTGATGTGAGGTCATATT+TGG | 0.246765 | 2:-22043095 | MsG0280007868.01.T01:CDS |
TATTGAAGTGAGATGTCTTT+TGG | 0.257327 | 2:+22042992 | None:intergenic |
CTTCTCCAAATGTTGTGGTT+TGG | 0.271577 | 2:-22042958 | MsG0280007868.01.T01:CDS |
TATACTAAGTAGCCTATAAT+TGG | 0.277041 | 2:+22043070 | None:intergenic |
TTCTCCAAATGTTGTGGTTT+GGG | 0.280883 | 2:-22042957 | MsG0280007868.01.T01:CDS |
TCATATTTGGATCCAATTAT+AGG | 0.286433 | 2:-22043082 | MsG0280007868.01.T01:CDS |
AATTTGATTAGGCATGTTAA+AGG | 0.330111 | 2:-22042767 | MsG0280007868.01.T01:CDS |
CCATTGAAACTTATATATTT+GGG | 0.335024 | 2:-22042721 | MsG0280007868.01.T01:CDS |
AAATTTATTTGATGCTTTGT+TGG | 0.344765 | 2:-22042915 | MsG0280007868.01.T01:CDS |
ATTCGCAAAATTTGTTCTTC+CGG | 0.345878 | 2:-22043239 | MsG0280007868.01.T01:CDS |
CCCAAATATATAAGTTTCAA+TGG | 0.347808 | 2:+22042721 | None:intergenic |
GCAATTGATAATACTGGAAT+TGG | 0.351863 | 2:-22042878 | MsG0280007868.01.T01:CDS |
TCACAAGCAGGTGCTCAAAT+AGG | 0.357040 | 2:-22043565 | MsG0280007868.01.T01:CDS |
GAGTAAATATTTGCAAATAA+AGG | 0.360502 | 2:+22043037 | None:intergenic |
TCTGGCATTGAACTTATGTT+AGG | 0.373181 | 2:-22043412 | MsG0280007868.01.T01:CDS |
GCTATTGACATGACCATGAT+AGG | 0.381065 | 2:-22043151 | MsG0280007868.01.T01:CDS |
CATGCTGCAATTGATAATAC+TGG | 0.383359 | 2:-22042884 | MsG0280007868.01.T01:CDS |
TTTATCTTGATAATTTGATT+AGG | 0.386954 | 2:-22042778 | MsG0280007868.01.T01:CDS |
GCTTCAAGAGCAGCTTGGTT+TGG | 0.388792 | 2:+22043445 | None:intergenic |
TTGTGGTTTGGGATGGTTCA+AGG | 0.389750 | 2:-22042946 | MsG0280007868.01.T01:CDS |
AATTGAGAATTGCCGCCAAC+TGG | 0.393043 | 2:+22043259 | None:intergenic |
CCATCCCAAACCACAACATT+TGG | 0.400777 | 2:+22042953 | None:intergenic |
ACAATGACATTGCAATTCAA+TGG | 0.401193 | 2:-22043354 | MsG0280007868.01.T01:CDS |
AAGTATCCATTTGGATTTGA+AGG | 0.411654 | 2:-22042626 | MsG0280007868.01.T01:CDS |
TGTGGTTTGGGATGGTTCAA+GGG | 0.420618 | 2:-22042945 | MsG0280007868.01.T01:CDS |
CCAAAATGTTTCTCTAACTC+AGG | 0.430512 | 2:+22042674 | None:intergenic |
GCTCAAATAGGTGTTTGTTA+TGG | 0.432274 | 2:-22043553 | MsG0280007868.01.T01:CDS |
AATTAAATGTCACTCTTAAG+AGG | 0.439107 | 2:+22042554 | None:intergenic |
ACTTCGTATCCGCCGTCTAA+AGG | 0.439251 | 2:-22043127 | MsG0280007868.01.T01:CDS |
GATTTGAAGGGAAAATGGAT+TGG | 0.448353 | 2:-22042613 | MsG0280007868.01.T01:CDS |
ATTTGAAGGGAAAATGGATT+GGG | 0.457784 | 2:-22042612 | MsG0280007868.01.T01:CDS |
CAATGACATTGCAATTCAAT+GGG | 0.471685 | 2:-22043353 | MsG0280007868.01.T01:CDS |
AAATCTTCACGATCAAATCA+AGG | 0.476242 | 2:-22043182 | MsG0280007868.01.T01:CDS |
TTGAATTGCAATGTCATTGT+TGG | 0.477945 | 2:+22043357 | None:intergenic |
CCAAATGTTGTGGTTTGGGA+TGG | 0.482378 | 2:-22042953 | MsG0280007868.01.T01:CDS |
AGGTGTTTGTTATGGTATGA+TGG | 0.484462 | 2:-22043545 | MsG0280007868.01.T01:CDS |
GTGGTTTGGGATGGTTCAAG+GGG | 0.489821 | 2:-22042944 | MsG0280007868.01.T01:CDS |
ATTCACTTCTCCAAATGTTG+TGG | 0.493787 | 2:-22042963 | MsG0280007868.01.T01:CDS |
TGATTAGGCATGTTAAAGGT+GGG | 0.513293 | 2:-22042763 | MsG0280007868.01.T01:CDS |
GGTGGGACACCAATGAGGTC+TGG | 0.514579 | 2:-22042746 | MsG0280007868.01.T01:CDS |
AGATCTATTGCTTCACGTTG+TGG | 0.516948 | 2:+22043508 | None:intergenic |
CCAAATATATAAGTTTCAAT+GGG | 0.518047 | 2:+22042722 | None:intergenic |
AAGGTTGTTGTGTCTGAAAG+TGG | 0.522952 | 2:-22042848 | MsG0280007868.01.T01:CDS |
CTTGAAGCACTTAGAAACTC+TGG | 0.524132 | 2:-22043430 | MsG0280007868.01.T01:CDS |
AGTATCCATTTGGATTTGAA+GGG | 0.525147 | 2:-22042625 | MsG0280007868.01.T01:CDS |
TTGATTAGGCATGTTAAAGG+TGG | 0.546182 | 2:-22042764 | MsG0280007868.01.T01:CDS |
TCAATGGGTCCAGACCTCAT+TGG | 0.548344 | 2:+22042737 | None:intergenic |
AAAATGGATTGGGAAATTGA+TGG | 0.551523 | 2:-22042602 | MsG0280007868.01.T01:CDS |
AACGAAGTTAATCCAGTTGG+CGG | 0.564618 | 2:-22043271 | MsG0280007868.01.T01:CDS |
CGATCAAATCAAGGTTTCAA+CGG | 0.570099 | 2:-22043173 | MsG0280007868.01.T01:CDS |
CAAACAACATCAAAAGAATG+AGG | 0.570130 | 2:-22043477 | MsG0280007868.01.T01:CDS |
CGGATACGAAGTTCCTATCA+TGG | 0.570657 | 2:+22043138 | None:intergenic |
GAAAGTGGTTGGCCTTCAGA+TGG | 0.571089 | 2:-22042833 | MsG0280007868.01.T01:CDS |
GGTGTTTGTTATGGTATGAT+GGG | 0.574240 | 2:-22043544 | MsG0280007868.01.T01:CDS |
AGTGGTTGGCCTTCAGATGG+TGG | 0.591010 | 2:-22042830 | MsG0280007868.01.T01:CDS |
TTGTTGTGTCTGAAAGTGGT+TGG | 0.599923 | 2:-22042844 | MsG0280007868.01.T01:CDS |
TCTATTGCTTCACGTTGTGG+TGG | 0.611423 | 2:+22043511 | None:intergenic |
TAAGTGCTTCAAGAGCAGCT+TGG | 0.628533 | 2:+22043440 | None:intergenic |
GGTAACGAAGTTAATCCAGT+TGG | 0.636313 | 2:-22043274 | MsG0280007868.01.T01:CDS |
AAAATCAAATACATCGCGGT+CGG | 0.638139 | 2:-22043295 | MsG0280007868.01.T01:CDS |
GTTCATTTAAAAGTGATGTG+AGG | 0.641856 | 2:-22043105 | MsG0280007868.01.T01:CDS |
GTTGCAAATCCACCATCTGA+AGG | 0.643788 | 2:+22042821 | None:intergenic |
TTAAATGAACCTTTAGACGG+CGG | 0.669154 | 2:+22043118 | None:intergenic |
TTAAAGGTGGGACACCAATG+AGG | 0.687393 | 2:-22042751 | MsG0280007868.01.T01:CDS |
TGTCAAAATCAAATACATCG+CGG | 0.787139 | 2:-22043299 | MsG0280007868.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTATCTTGATAATTTGATT+AGG | - | Chr2:22043349-22043368 | MsG0280007868.01.T01:CDS | 15.0% |
!! | AAATTTATTTGATGCTTTGT+TGG | - | Chr2:22043212-22043231 | MsG0280007868.01.T01:CDS | 20.0% |
!! | CCAAATATATAAGTTTCAAT+GGG | + | Chr2:22043408-22043427 | None:intergenic | 20.0% |
!! | CCATTGAAACTTATATATTT+GGG | - | Chr2:22043406-22043425 | MsG0280007868.01.T01:CDS | 20.0% |
!! | GAGTAAATATTTGCAAATAA+AGG | + | Chr2:22043093-22043112 | None:intergenic | 20.0% |
!!! | ACAAAGCATCAAATAAATTT+TGG | + | Chr2:22043212-22043231 | None:intergenic | 20.0% |
!!! | TGATATATATTTTGAATTGC+CGG | + | Chr2:22042910-22042929 | None:intergenic | 20.0% |
! | AATTTGATTAGGCATGTTAA+AGG | - | Chr2:22043360-22043379 | MsG0280007868.01.T01:CDS | 25.0% |
! | CCCAAATATATAAGTTTCAA+TGG | + | Chr2:22043409-22043428 | None:intergenic | 25.0% |
! | CCCATTGAAACTTATATATT+TGG | - | Chr2:22043405-22043424 | MsG0280007868.01.T01:CDS | 25.0% |
! | TATACTAAGTAGCCTATAAT+TGG | + | Chr2:22043060-22043079 | None:intergenic | 25.0% |
! | TCATATTTGGATCCAATTAT+AGG | - | Chr2:22043045-22043064 | MsG0280007868.01.T01:CDS | 25.0% |
!! | CTTTTAAATGAACCTTTAGA+CGG | + | Chr2:22043015-22043034 | None:intergenic | 25.0% |
!!! | AAACAGAAAAAGTATCCATT+TGG | - | Chr2:22043492-22043511 | MsG0280007868.01.T01:CDS | 25.0% |
!!! | ATGTATTTGATTTTGACACT+AGG | + | Chr2:22042826-22042845 | None:intergenic | 25.0% |
!!! | ATGTTTTGAAGATCAGAATT+TGG | + | Chr2:22042745-22042764 | None:intergenic | 25.0% |
!!! | GGATACTTTTTCTGTTTATT+AGG | + | Chr2:22043489-22043508 | None:intergenic | 25.0% |
!!! | TGTATTTGATTTTGACACTA+GGG | + | Chr2:22042825-22042844 | None:intergenic | 25.0% |
AAATCTTCACGATCAAATCA+AGG | - | Chr2:22042945-22042964 | MsG0280007868.01.T01:CDS | 30.0% | |
AAGTATCCATTTGGATTTGA+AGG | - | Chr2:22043501-22043520 | MsG0280007868.01.T01:CDS | 30.0% | |
ACAATGACATTGCAATTCAA+TGG | - | Chr2:22042773-22042792 | MsG0280007868.01.T01:CDS | 30.0% | |
AGTATCCATTTGGATTTGAA+GGG | - | Chr2:22043502-22043521 | MsG0280007868.01.T01:CDS | 30.0% | |
ATTTGGATTTGAAGGGAAAA+TGG | - | Chr2:22043509-22043528 | MsG0280007868.01.T01:CDS | 30.0% | |
CAAACAACATCAAAAGAATG+AGG | - | Chr2:22042650-22042669 | MsG0280007868.01.T01:CDS | 30.0% | |
CAATGACATTGCAATTCAAT+GGG | - | Chr2:22042774-22042793 | MsG0280007868.01.T01:CDS | 30.0% | |
GTTCATTTAAAAGTGATGTG+AGG | - | Chr2:22043022-22043041 | MsG0280007868.01.T01:CDS | 30.0% | |
TGTCAAAATCAAATACATCG+CGG | - | Chr2:22042828-22042847 | MsG0280007868.01.T01:CDS | 30.0% | |
TTGAATTGCAATGTCATTGT+TGG | + | Chr2:22042773-22042792 | None:intergenic | 30.0% | |
! | ATTCGCAAAATTTGTTCTTC+CGG | - | Chr2:22042888-22042907 | MsG0280007868.01.T01:CDS | 30.0% |
! | ATTGAAGTGAGATGTCTTTT+GGG | + | Chr2:22043137-22043156 | None:intergenic | 30.0% |
! | ATTTGAAGGGAAAATGGATT+GGG | - | Chr2:22043515-22043534 | MsG0280007868.01.T01:CDS | 30.0% |
! | ATTTTCCCTTCAAATCCAAA+TGG | + | Chr2:22043510-22043529 | None:intergenic | 30.0% |
! | GCAATTGATAATACTGGAAT+TGG | - | Chr2:22043249-22043268 | MsG0280007868.01.T01:CDS | 30.0% |
! | TATTGAAGTGAGATGTCTTT+TGG | + | Chr2:22043138-22043157 | None:intergenic | 30.0% |
!! | AAAATGGATTGGGAAATTGA+TGG | - | Chr2:22043525-22043544 | MsG0280007868.01.T01:CDS | 30.0% |
!!! | TACTGGAATTGGTTTTGTTA+AGG | - | Chr2:22043260-22043279 | MsG0280007868.01.T01:CDS | 30.0% |
AAAATCAAATACATCGCGGT+CGG | - | Chr2:22042832-22042851 | MsG0280007868.01.T01:CDS | 35.0% | |
AAGTGATGTGAGGTCATATT+TGG | - | Chr2:22043032-22043051 | MsG0280007868.01.T01:CDS | 35.0% | |
ATTCACTTCTCCAAATGTTG+TGG | - | Chr2:22043164-22043183 | MsG0280007868.01.T01:CDS | 35.0% | |
CCAAAATGTTTCTCTAACTC+AGG | + | Chr2:22043456-22043475 | None:intergenic | 35.0% | |
CGATCAAATCAAGGTTTCAA+CGG | - | Chr2:22042954-22042973 | MsG0280007868.01.T01:CDS | 35.0% | |
GATTTGAAGGGAAAATGGAT+TGG | - | Chr2:22043514-22043533 | MsG0280007868.01.T01:CDS | 35.0% | |
TGATTAGGCATGTTAAAGGT+GGG | - | Chr2:22043364-22043383 | MsG0280007868.01.T01:CDS | 35.0% | |
TTAAATGAACCTTTAGACGG+CGG | + | Chr2:22043012-22043031 | None:intergenic | 35.0% | |
TTCTCCAAATGTTGTGGTTT+GGG | - | Chr2:22043170-22043189 | MsG0280007868.01.T01:CDS | 35.0% | |
TTGATTAGGCATGTTAAAGG+TGG | - | Chr2:22043363-22043382 | MsG0280007868.01.T01:CDS | 35.0% | |
! | CATGCTGCAATTGATAATAC+TGG | - | Chr2:22043243-22043262 | MsG0280007868.01.T01:CDS | 35.0% |
! | CCTGAGTTAGAGAAACATTT+TGG | - | Chr2:22043453-22043472 | MsG0280007868.01.T01:CDS | 35.0% |
! | GCTCAAATAGGTGTTTGTTA+TGG | - | Chr2:22042574-22042593 | MsG0280007868.01.T01:CDS | 35.0% |
! | TCTGGCATTGAACTTATGTT+AGG | - | Chr2:22042715-22042734 | MsG0280007868.01.T01:CDS | 35.0% |
!! | AGGTGTTTGTTATGGTATGA+TGG | - | Chr2:22042582-22042601 | MsG0280007868.01.T01:CDS | 35.0% |
!! | GGTGTTTGTTATGGTATGAT+GGG | - | Chr2:22042583-22042602 | MsG0280007868.01.T01:CDS | 35.0% |
AACGAAGTTAATCCAGTTGG+CGG | - | Chr2:22042856-22042875 | MsG0280007868.01.T01:CDS | 40.0% | |
AAGGTTGTTGTGTCTGAAAG+TGG | - | Chr2:22043279-22043298 | MsG0280007868.01.T01:CDS | 40.0% | |
AGATCTATTGCTTCACGTTG+TGG | + | Chr2:22042622-22042641 | None:intergenic | 40.0% | |
CTTCTCCAAATGTTGTGGTT+TGG | - | Chr2:22043169-22043188 | MsG0280007868.01.T01:CDS | 40.0% | |
GCTATTGACATGACCATGAT+AGG | - | Chr2:22042976-22042995 | MsG0280007868.01.T01:CDS | 40.0% | |
GGTAACGAAGTTAATCCAGT+TGG | - | Chr2:22042853-22042872 | MsG0280007868.01.T01:CDS | 40.0% | |
TTGTTGTGTCTGAAAGTGGT+TGG | - | Chr2:22043283-22043302 | MsG0280007868.01.T01:CDS | 40.0% | |
! | CTTGAAGCACTTAGAAACTC+TGG | - | Chr2:22042697-22042716 | MsG0280007868.01.T01:CDS | 40.0% |
AATTGAGAATTGCCGCCAAC+TGG | + | Chr2:22042871-22042890 | None:intergenic | 45.0% | |
CCATCCCAAACCACAACATT+TGG | + | Chr2:22043177-22043196 | None:intergenic | 45.0% | |
CGGATACGAAGTTCCTATCA+TGG | + | Chr2:22042992-22043011 | None:intergenic | 45.0% | |
GTTGCAAATCCACCATCTGA+AGG | + | Chr2:22043309-22043328 | None:intergenic | 45.0% | |
TAAGTGCTTCAAGAGCAGCT+TGG | + | Chr2:22042690-22042709 | None:intergenic | 45.0% | |
TCACAAGCAGGTGCTCAAAT+AGG | - | Chr2:22042562-22042581 | MsG0280007868.01.T01:CDS | 45.0% | |
TCTATTGCTTCACGTTGTGG+TGG | + | Chr2:22042619-22042638 | None:intergenic | 45.0% | |
TTAAAGGTGGGACACCAATG+AGG | - | Chr2:22043376-22043395 | MsG0280007868.01.T01:CDS | 45.0% | |
! | CCAAATGTTGTGGTTTGGGA+TGG | - | Chr2:22043174-22043193 | MsG0280007868.01.T01:CDS | 45.0% |
! | TGTGGTTTGGGATGGTTCAA+GGG | - | Chr2:22043182-22043201 | MsG0280007868.01.T01:CDS | 45.0% |
! | TTGTGGTTTGGGATGGTTCA+AGG | - | Chr2:22043181-22043200 | MsG0280007868.01.T01:CDS | 45.0% |
ACTTCGTATCCGCCGTCTAA+AGG | - | Chr2:22043000-22043019 | MsG0280007868.01.T01:CDS | 50.0% | |
GCTTCAAGAGCAGCTTGGTT+TGG | + | Chr2:22042685-22042704 | None:intergenic | 50.0% | |
TCAATGGGTCCAGACCTCAT+TGG | + | Chr2:22043393-22043412 | None:intergenic | 50.0% | |
! | GTGGTTTGGGATGGTTCAAG+GGG | - | Chr2:22043183-22043202 | MsG0280007868.01.T01:CDS | 50.0% |
!! | GAAAGTGGTTGGCCTTCAGA+TGG | - | Chr2:22043294-22043313 | MsG0280007868.01.T01:CDS | 50.0% |
!! | AGTGGTTGGCCTTCAGATGG+TGG | - | Chr2:22043297-22043316 | MsG0280007868.01.T01:CDS | 55.0% |
GGTGGGACACCAATGAGGTC+TGG | - | Chr2:22043381-22043400 | MsG0280007868.01.T01:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr2 | gene | 22042556 | 22043593 | 22042556 | ID=MsG0280007868.01;Name=MsG0280007868.01 |
Chr2 | mRNA | 22042556 | 22043593 | 22042556 | ID=MsG0280007868.01.T01;Parent=MsG0280007868.01;Name=MsG0280007868.01.T01;_AED=0.46;_eAED=0.46;_QI=0|-1|0|1|-1|1|1|0|345 |
Chr2 | exon | 22042556 | 22043593 | 22042556 | ID=MsG0280007868.01.T01:exon:18236;Parent=MsG0280007868.01.T01 |
Chr2 | CDS | 22042556 | 22043593 | 22042556 | ID=MsG0280007868.01.T01:cds;Parent=MsG0280007868.01.T01 |
Gene Sequence |
Protein sequence |