Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007897.01.T01 | XP_003594813.1 | 74.419 | 129 | 23 | 4 | 1 | 128 | 16 | 135 | 4.23E-13 | 75.9 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007897.01.T01 | G7IMW9 | 74.419 | 129 | 23 | 4 | 1 | 128 | 16 | 135 | 2.02e-13 | 75.9 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180005337.01 | MsG0280007897.01 | 0.843288 | 1.536221e-58 | 2.392393e-55 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007897.01.T01 | MTR_2g034910 | 74.419 | 129 | 23 | 4 | 1 | 128 | 16 | 135 | 5.13e-17 | 75.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 87 sgRNAs with CRISPR-Local
Find 99 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGTGCACTTAACTTCATCTT+TGG | 0.247021 | 2:+22674408 | None:intergenic |
| ATCTTTAACCGTTACTAAAT+CGG | 0.318617 | 2:-22674479 | MsG0280007897.01.T01:CDS |
| CTTGTGATCTATTACTAAAT+CGG | 0.340493 | 2:+22674447 | None:intergenic |
| GGTGGTGGAGGTGGAGGTGG+TGG | 0.343944 | 2:-22674181 | MsG0280007897.01.T01:CDS |
| AAAGGAAAATAAGGTACAAT+AGG | 0.353189 | 2:+22674084 | None:intergenic |
| TGGTAATAGAAAGGAAAATA+AGG | 0.358544 | 2:+22674075 | None:intergenic |
| AGCTCCAGTGGTGGTGGTGG+TGG | 0.358828 | 2:-22674274 | MsG0280007897.01.T01:CDS |
| GGAGGTGGTGGAGGTGGAGG+TGG | 0.379853 | 2:-22674184 | MsG0280007897.01.T01:CDS |
| AAATAAGGTACAATAGGATT+TGG | 0.393540 | 2:+22674090 | None:intergenic |
| AGGAGGAGGAGGACAGTTGT+TGG | 0.410386 | 2:+22674306 | None:intergenic |
| TAGGATTTGGTGGGCGGCGG+AGG | 0.410904 | 2:+22674103 | None:intergenic |
| TCTACCGGAGGTGGTGGAGG+TGG | 0.411658 | 2:-22674190 | MsG0280007897.01.T01:CDS |
| GGCGGCACCACCGTCTTTGA+AGG | 0.414476 | 2:-22674034 | MsG0280007897.01.T01:CDS |
| TTATATTATCCTCCGCCAAC+TGG | 0.421888 | 2:-22674157 | MsG0280007897.01.T01:CDS |
| GACGGTGGTGCCGCCGAGCC+CGG | 0.430042 | 2:+22674042 | None:intergenic |
| ACCGGAGGTGGTGGAGGTGG+AGG | 0.432678 | 2:-22674187 | MsG0280007897.01.T01:CDS |
| GGTGCCGCCGAGCCCGGTGG+TGG | 0.442797 | 2:+22674048 | None:intergenic |
| ACCTCCACCTCCACCACCTC+CGG | 0.448917 | 2:+22674186 | None:intergenic |
| AGTGGCGGTGACGGTGGTGG+TGG | 0.454915 | 2:+22674349 | None:intergenic |
| GGAGAAGGTGGTGGCGGCGA+CGG | 0.458678 | 2:+22674370 | None:intergenic |
| GACAGTGGCGGTGACGGTGG+TGG | 0.466762 | 2:+22674346 | None:intergenic |
| CCTCCGGTAGACGCCGGTGG+CGG | 0.466924 | 2:+22674202 | None:intergenic |
| CCAACTGGTGGTAGTGGTAG+TGG | 0.469708 | 2:-22674142 | MsG0280007897.01.T01:CDS |
| GGTGACGGTGGTGGTGGAGA+AGG | 0.472035 | 2:+22674355 | None:intergenic |
| GCGTCTACCGGAGGTGGTGG+AGG | 0.473091 | 2:-22674193 | MsG0280007897.01.T01:CDS |
| CTCCGGTAGACGCCGGTGGC+GGG | 0.473116 | 2:+22674203 | None:intergenic |
| GGTGGTAGTGGTAGTGGAAG+TGG | 0.474853 | 2:-22674136 | MsG0280007897.01.T01:CDS |
| CTATTACCACACTCCACCAC+CGG | 0.475844 | 2:-22674061 | MsG0280007897.01.T01:CDS |
| GGTGGTGACAGTGGCGGTGA+CGG | 0.476993 | 2:+22674340 | None:intergenic |
| AGGAGGAGGACAGTTGTTGG+TGG | 0.478995 | 2:+22674309 | None:intergenic |
| TCACCAAGCTCCAGTGGTGG+TGG | 0.481111 | 2:-22674280 | MsG0280007897.01.T01:CDS |
| GCACTTAACTTCATCTTTGG+AGG | 0.482328 | 2:+22674411 | None:intergenic |
| CCTCCGCCAACTGGTGGTAG+TGG | 0.486928 | 2:-22674148 | MsG0280007897.01.T01:CDS |
| CCGGCGTCTACCGGAGGTGG+TGG | 0.492152 | 2:-22674196 | MsG0280007897.01.T01:CDS |
| CCACACTCCACCACCGGGCT+CGG | 0.494506 | 2:-22674055 | MsG0280007897.01.T01:CDS |
| GGACAGTTGTTGGTGGAAGC+AGG | 0.499833 | 2:+22674316 | None:intergenic |
| TAATACACTGAAGGCGGCGG+TGG | 0.500200 | 2:+22674229 | None:intergenic |
| TACCCGCCACCGGCGTCTAC+CGG | 0.500551 | 2:-22674205 | MsG0280007897.01.T01:CDS |
| TTAACCGTTACTAAATCGGT+TGG | 0.502986 | 2:-22674475 | MsG0280007897.01.T01:CDS |
| CCACTGGAGCTTGGTGAAGA+AGG | 0.503960 | 2:+22674286 | None:intergenic |
| CAATAGGATTTGGTGGGCGG+CGG | 0.508983 | 2:+22674100 | None:intergenic |
| CCAAGCTCCAGTGGTGGTGG+TGG | 0.512660 | 2:-22674277 | MsG0280007897.01.T01:CDS |
| TAAGGTACAATAGGATTTGG+TGG | 0.516914 | 2:+22674093 | None:intergenic |
| CCTTCTTCACCAAGCTCCAG+TGG | 0.518715 | 2:-22674286 | MsG0280007897.01.T01:CDS |
| CTTGGTGAAGAAGGAGGAGG+AGG | 0.519665 | 2:+22674295 | None:intergenic |
| GGTGGTGGAGAAGGTGGTGG+CGG | 0.527068 | 2:+22674364 | None:intergenic |
| ATGGAAAGAAAATGGAAGGA+AGG | 0.529742 | 2:-22673945 | MsG0280007897.01.T01:CDS |
| GGTGGTGGTGGAGAAGGTGG+TGG | 0.530964 | 2:+22674361 | None:intergenic |
| CCACCACCACCACTGGAGCT+TGG | 0.531942 | 2:+22674277 | None:intergenic |
| CCACCGGCGTCTACCGGAGG+TGG | 0.533129 | 2:-22674199 | MsG0280007897.01.T01:CDS |
| GACGGTGGTGGTGGAGAAGG+TGG | 0.541980 | 2:+22674358 | None:intergenic |
| CCGAGCCCGGTGGTGGAGTG+TGG | 0.543137 | 2:+22674055 | None:intergenic |
| GAAGCAGGTGGTGGTGACAG+TGG | 0.546482 | 2:+22674331 | None:intergenic |
| GGTGACAGTGGCGGTGACGG+TGG | 0.559541 | 2:+22674343 | None:intergenic |
| GGTAATGCTCTGCGCCGTGT+CGG | 0.563500 | 2:-22674007 | MsG0280007897.01.T01:CDS |
| GCGGCACCACCGTCTTTGAA+GGG | 0.568498 | 2:-22674033 | MsG0280007897.01.T01:CDS |
| GGTGGAGTGTGGTAATAGAA+AGG | 0.568658 | 2:+22674066 | None:intergenic |
| TATTACCACACTCCACCACC+GGG | 0.586579 | 2:-22674060 | MsG0280007897.01.T01:CDS |
| CCACTACCACTACCACCAGT+TGG | 0.588334 | 2:+22674142 | None:intergenic |
| AAGGTACAATAGGATTTGGT+GGG | 0.588944 | 2:+22674094 | None:intergenic |
| GGTAGTGGTAGTGGAAGTGG+TGG | 0.589059 | 2:-22674133 | MsG0280007897.01.T01:CDS |
| TCTTCACCAAGCTCCAGTGG+TGG | 0.593643 | 2:-22674283 | MsG0280007897.01.T01:CDS |
| TATTATCCTCCGCCAACTGG+TGG | 0.593836 | 2:-22674154 | MsG0280007897.01.T01:CDS |
| TGCTCCAACCGATTTAGTAA+CGG | 0.594986 | 2:+22674471 | None:intergenic |
| GAGCTTGGTGAAGAAGGAGG+AGG | 0.596029 | 2:+22674292 | None:intergenic |
| AAGGAAGGAAAATAAGTGCA+TGG | 0.602965 | 2:-22673930 | MsG0280007897.01.T01:CDS |
| CACTCCACCACCGGGCTCGG+CGG | 0.615089 | 2:-22674052 | MsG0280007897.01.T01:CDS |
| CTACCACTACCACCAGTTGG+CGG | 0.617051 | 2:+22674145 | None:intergenic |
| TTGTTGGTGGAAGCAGGTGG+TGG | 0.620686 | 2:+22674322 | None:intergenic |
| GTACAATAGGATTTGGTGGG+CGG | 0.621187 | 2:+22674097 | None:intergenic |
| GAAGTTAAGTGCACGCCTTG+TGG | 0.627211 | 2:-22674400 | MsG0280007897.01.T01:CDS |
| CCGCCACCGGCGTCTACCGG+AGG | 0.627924 | 2:-22674202 | MsG0280007897.01.T01:CDS |
| CCACTACCACCAGTTGGCGG+AGG | 0.628033 | 2:+22674148 | None:intergenic |
| CTGGAGCTTGGTGAAGAAGG+AGG | 0.628307 | 2:+22674289 | None:intergenic |
| CCACCTCCGGTAGACGCCGG+TGG | 0.631389 | 2:+22674199 | None:intergenic |
| GGTGGTGCCGCCGAGCCCGG+TGG | 0.645314 | 2:+22674045 | None:intergenic |
| ACCACCGTCTTTGAAGGGAT+CGG | 0.646652 | 2:-22674028 | MsG0280007897.01.T01:CDS |
| CCACCACCTCCGGTAGACGC+CGG | 0.647696 | 2:+22674196 | None:intergenic |
| ATTACCGATCCCTTCAAAGA+CGG | 0.656268 | 2:+22674024 | None:intergenic |
| ACCGATCCCTTCAAAGACGG+TGG | 0.659115 | 2:+22674027 | None:intergenic |
| GCAGGTGGTGGTGACAGTGG+CGG | 0.662016 | 2:+22674334 | None:intergenic |
| GGCGGGTAGTAATACACTGA+AGG | 0.664968 | 2:+22674220 | None:intergenic |
| AGTGTATTACTACCCGCCAC+CGG | 0.669063 | 2:-22674215 | MsG0280007897.01.T01:CDS |
| CAGTTGTTGGTGGAAGCAGG+TGG | 0.669166 | 2:+22674319 | None:intergenic |
| TAGTAATACACTGAAGGCGG+CGG | 0.672350 | 2:+22674226 | None:intergenic |
| GGCGACGGAACTTGACCACA+AGG | 0.691922 | 2:+22674385 | None:intergenic |
| GGGTAGTAATACACTGAAGG+CGG | 0.704304 | 2:+22674223 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTTTGATGGAACAAAAA+TGG | - | Chr2:22674418-22674437 | MsG0280007897.01.T01:CDS | 20.0% |
| ! | AAAAATGGAAAGAAAATGGA+AGG | - | Chr2:22674433-22674452 | MsG0280007897.01.T01:CDS | 25.0% |
| ! | AAAGGAAAATAAGGTACAAT+AGG | + | Chr2:22674301-22674320 | None:intergenic | 25.0% |
| ! | AAATAAGGTACAATAGGATT+TGG | + | Chr2:22674295-22674314 | None:intergenic | 25.0% |
| ! | ATCTTTAACCGTTACTAAAT+CGG | - | Chr2:22673903-22673922 | MsG0280007897.01.T01:CDS | 25.0% |
| ! | CAAAATAACGCCATAAAAAT+AGG | + | Chr2:22674406-22674425 | None:intergenic | 25.0% |
| ! | CTTGTGATCTATTACTAAAT+CGG | + | Chr2:22673938-22673957 | None:intergenic | 25.0% |
| ! | GAACAAAAATGGAAAGAAAA+TGG | - | Chr2:22674429-22674448 | MsG0280007897.01.T01:CDS | 25.0% |
| ! | TGGTAATAGAAAGGAAAATA+AGG | + | Chr2:22674310-22674329 | None:intergenic | 25.0% |
| !!! | TTTTTATGGCGTTATTTTGA+TGG | - | Chr2:22674407-22674426 | MsG0280007897.01.T01:CDS | 25.0% |
| AAAAATAGGTAAAACCGACA+CGG | + | Chr2:22674392-22674411 | None:intergenic | 30.0% | |
| !!! | GTCGGTTTTACCTATTTTTA+TGG | - | Chr2:22674393-22674412 | MsG0280007897.01.T01:CDS | 30.0% |
| AAGGAAGGAAAATAAGTGCA+TGG | - | Chr2:22674452-22674471 | MsG0280007897.01.T01:CDS | 35.0% | |
| ATGGAAAGAAAATGGAAGGA+AGG | - | Chr2:22674437-22674456 | MsG0280007897.01.T01:CDS | 35.0% | |
| TAAGGTACAATAGGATTTGG+TGG | + | Chr2:22674292-22674311 | None:intergenic | 35.0% | |
| TTAACCGTTACTAAATCGGT+TGG | - | Chr2:22673907-22673926 | MsG0280007897.01.T01:CDS | 35.0% | |
| ! | AAGGTACAATAGGATTTGGT+GGG | + | Chr2:22674291-22674310 | None:intergenic | 35.0% |
| ! | CATGGAATTTTTGCAGATCT+TGG | - | Chr2:22674470-22674489 | MsG0280007897.01.T01:CDS | 35.0% |
| ATTACCGATCCCTTCAAAGA+CGG | + | Chr2:22674361-22674380 | None:intergenic | 40.0% | |
| CGTGCACTTAACTTCATCTT+TGG | + | Chr2:22673977-22673996 | None:intergenic | 40.0% | |
| GCACTTAACTTCATCTTTGG+AGG | + | Chr2:22673974-22673993 | None:intergenic | 40.0% | |
| TTATATTATCCTCCGCCAAC+TGG | - | Chr2:22674225-22674244 | MsG0280007897.01.T01:CDS | 40.0% | |
| ! | TGCTCCAACCGATTTAGTAA+CGG | + | Chr2:22673914-22673933 | None:intergenic | 40.0% |
| GGGTAGTAATACACTGAAGG+CGG | + | Chr2:22674162-22674181 | None:intergenic | 45.0% | |
| GGTGGAGTGTGGTAATAGAA+AGG | + | Chr2:22674319-22674338 | None:intergenic | 45.0% | |
| TAGTAATACACTGAAGGCGG+CGG | + | Chr2:22674159-22674178 | None:intergenic | 45.0% | |
| !! | GTACAATAGGATTTGGTGGG+CGG | + | Chr2:22674288-22674307 | None:intergenic | 45.0% |
| AGTGTATTACTACCCGCCAC+CGG | - | Chr2:22674167-22674186 | MsG0280007897.01.T01:CDS | 50.0% | |
| CTATTACCACACTCCACCAC+CGG | - | Chr2:22674321-22674340 | MsG0280007897.01.T01:CDS | 50.0% | |
| GAAGTTAAGTGCACGCCTTG+TGG | - | Chr2:22673982-22674001 | MsG0280007897.01.T01:CDS | 50.0% | |
| GGCGGGTAGTAATACACTGA+AGG | + | Chr2:22674165-22674184 | None:intergenic | 50.0% | |
| TATTACCACACTCCACCACC+GGG | - | Chr2:22674322-22674341 | MsG0280007897.01.T01:CDS | 50.0% | |
| TATTATCCTCCGCCAACTGG+TGG | - | Chr2:22674228-22674247 | MsG0280007897.01.T01:CDS | 50.0% | |
| ! | ACCACCGTCTTTGAAGGGAT+CGG | - | Chr2:22674354-22674373 | MsG0280007897.01.T01:CDS | 50.0% |
| ACCGATCCCTTCAAAGACGG+TGG | + | Chr2:22674358-22674377 | None:intergenic | 55.0% | |
| AGGAGGAGGACAGTTGTTGG+TGG | + | Chr2:22674076-22674095 | None:intergenic | 55.0% | |
| AGGAGGAGGAGGACAGTTGT+TGG | + | Chr2:22674079-22674098 | None:intergenic | 55.0% | |
| CCACTACCACTACCACCAGT+TGG | + | Chr2:22674243-22674262 | None:intergenic | 55.0% | |
| CCTTCTTCACCAAGCTCCAG+TGG | - | Chr2:22674096-22674115 | MsG0280007897.01.T01:CDS | 55.0% | |
| CTACCACTACCACCAGTTGG+CGG | + | Chr2:22674240-22674259 | None:intergenic | 55.0% | |
| CTTGGTGAAGAAGGAGGAGG+AGG | + | Chr2:22674090-22674109 | None:intergenic | 55.0% | |
| TAATACACTGAAGGCGGCGG+TGG | + | Chr2:22674156-22674175 | None:intergenic | 55.0% | |
| TCTTCACCAAGCTCCAGTGG+TGG | - | Chr2:22674099-22674118 | MsG0280007897.01.T01:CDS | 55.0% | |
| ! | CAGTTGTTGGTGGAAGCAGG+TGG | + | Chr2:22674066-22674085 | None:intergenic | 55.0% |
| ! | CCACTGGAGCTTGGTGAAGA+AGG | + | Chr2:22674099-22674118 | None:intergenic | 55.0% |
| ! | CTGGAGCTTGGTGAAGAAGG+AGG | + | Chr2:22674096-22674115 | None:intergenic | 55.0% |
| ! | GAGCTTGGTGAAGAAGGAGG+AGG | + | Chr2:22674093-22674112 | None:intergenic | 55.0% |
| ! | GGACAGTTGTTGGTGGAAGC+AGG | + | Chr2:22674069-22674088 | None:intergenic | 55.0% |
| ! | TTGTTGGTGGAAGCAGGTGG+TGG | + | Chr2:22674063-22674082 | None:intergenic | 55.0% |
| !! | CAATAGGATTTGGTGGGCGG+CGG | + | Chr2:22674285-22674304 | None:intergenic | 55.0% |
| !! | CCAACTGGTGGTAGTGGTAG+TGG | - | Chr2:22674240-22674259 | MsG0280007897.01.T01:CDS | 55.0% |
| !! | GGTAGTGGTAGTGGAAGTGG+TGG | - | Chr2:22674249-22674268 | MsG0280007897.01.T01:CDS | 55.0% |
| !! | GGTGGTAGTGGTAGTGGAAG+TGG | - | Chr2:22674246-22674265 | MsG0280007897.01.T01:CDS | 55.0% |
| GCGGCACCACCGTCTTTGAA+GGG | - | Chr2:22674349-22674368 | MsG0280007897.01.T01:CDS | 60.0% | |
| GGCGACGGAACTTGACCACA+AGG | + | Chr2:22674000-22674019 | None:intergenic | 60.0% | |
| GGTAATGCTCTGCGCCGTGT+CGG | - | Chr2:22674375-22674394 | MsG0280007897.01.T01:CDS | 60.0% | |
| TCACCAAGCTCCAGTGGTGG+TGG | - | Chr2:22674102-22674121 | MsG0280007897.01.T01:CDS | 60.0% | |
| ! | GAAGCAGGTGGTGGTGACAG+TGG | + | Chr2:22674054-22674073 | None:intergenic | 60.0% |
| ACCACCACCACCACCACCAC+TGG | + | Chr2:22674115-22674134 | None:intergenic | 65.0% | |
| ACCTCCACCTCCACCACCTC+CGG | + | Chr2:22674199-22674218 | None:intergenic | 65.0% | |
| CCACCACCACCACTGGAGCT+TGG | + | Chr2:22674108-22674127 | None:intergenic | 65.0% | |
| CCACTACCACCAGTTGGCGG+AGG | + | Chr2:22674237-22674256 | None:intergenic | 65.0% | |
| CCTCCGCCAACTGGTGGTAG+TGG | - | Chr2:22674234-22674253 | MsG0280007897.01.T01:CDS | 65.0% | |
| GGCGGCACCACCGTCTTTGA+AGG | - | Chr2:22674348-22674367 | MsG0280007897.01.T01:CDS | 65.0% | |
| GGTGGTGACAGTGGCGGTGA+CGG | + | Chr2:22674045-22674064 | None:intergenic | 65.0% | |
| ! | GCAGGTGGTGGTGACAGTGG+CGG | + | Chr2:22674051-22674070 | None:intergenic | 65.0% |
| !! | AGCTCCAGTGGTGGTGGTGG+TGG | - | Chr2:22674108-22674127 | MsG0280007897.01.T01:CDS | 65.0% |
| !! | AGTGGTGGTGGTGGTGGTGG+TGG | - | Chr2:22674114-22674133 | MsG0280007897.01.T01:CDS | 65.0% |
| !! | CCAAGCTCCAGTGGTGGTGG+TGG | - | Chr2:22674105-22674124 | MsG0280007897.01.T01:CDS | 65.0% |
| !! | GACGGTGGTGGTGGAGAAGG+TGG | + | Chr2:22674027-22674046 | None:intergenic | 65.0% |
| !! | GGTGACGGTGGTGGTGGAGA+AGG | + | Chr2:22674030-22674049 | None:intergenic | 65.0% |
| !! | GGTGGTGGAGAAGGTGGTGG+CGG | + | Chr2:22674021-22674040 | None:intergenic | 65.0% |
| !! | GGTGGTGGTGGAGAAGGTGG+TGG | + | Chr2:22674024-22674043 | None:intergenic | 65.0% |
| !! | GTGGTGGTGGTGGTGGTGGT+GGG | - | Chr2:22674115-22674134 | MsG0280007897.01.T01:CDS | 65.0% |
| !! | TAGGATTTGGTGGGCGGCGG+AGG | + | Chr2:22674282-22674301 | None:intergenic | 65.0% |
| !! | TCCAGTGGTGGTGGTGGTGG+TGG | - | Chr2:22674111-22674130 | MsG0280007897.01.T01:CDS | 65.0% |
| !! | TCTACCGGAGGTGGTGGAGG+TGG | - | Chr2:22674192-22674211 | MsG0280007897.01.T01:CDS | 65.0% |
| CCACACTCCACCACCGGGCT+CGG | - | Chr2:22674327-22674346 | MsG0280007897.01.T01:CDS | 70.0% | |
| CCACCACCTCCGGTAGACGC+CGG | + | Chr2:22674189-22674208 | None:intergenic | 70.0% | |
| TACCCGCCACCGGCGTCTAC+CGG | - | Chr2:22674177-22674196 | MsG0280007897.01.T01:CDS | 70.0% | |
| ! | AGTGGCGGTGACGGTGGTGG+TGG | + | Chr2:22674036-22674055 | None:intergenic | 70.0% |
| ! | GACAGTGGCGGTGACGGTGG+TGG | + | Chr2:22674039-22674058 | None:intergenic | 70.0% |
| ! | GCGTCTACCGGAGGTGGTGG+AGG | - | Chr2:22674189-22674208 | MsG0280007897.01.T01:CDS | 70.0% |
| ! | GGTGACAGTGGCGGTGACGG+TGG | + | Chr2:22674042-22674061 | None:intergenic | 70.0% |
| !! | ACCGGAGGTGGTGGAGGTGG+AGG | - | Chr2:22674195-22674214 | MsG0280007897.01.T01:CDS | 70.0% |
| !! | GGAGAAGGTGGTGGCGGCGA+CGG | + | Chr2:22674015-22674034 | None:intergenic | 70.0% |
| !! | GGAGGTGGTGGAGGTGGAGG+TGG | - | Chr2:22674198-22674217 | MsG0280007897.01.T01:CDS | 70.0% |
| !! | GGTGGTGGAGGTGGAGGTGG+TGG | - | Chr2:22674201-22674220 | MsG0280007897.01.T01:CDS | 70.0% |
| CACTCCACCACCGGGCTCGG+CGG | - | Chr2:22674330-22674349 | MsG0280007897.01.T01:CDS | 75.0% | |
| CCACCGGCGTCTACCGGAGG+TGG | - | Chr2:22674183-22674202 | MsG0280007897.01.T01:CDS | 75.0% | |
| CCACCTCCGGTAGACGCCGG+TGG | + | Chr2:22674186-22674205 | None:intergenic | 75.0% | |
| CCGGCGTCTACCGGAGGTGG+TGG | - | Chr2:22674186-22674205 | MsG0280007897.01.T01:CDS | 75.0% | |
| CCTCCGGTAGACGCCGGTGG+CGG | + | Chr2:22674183-22674202 | None:intergenic | 75.0% | |
| CTCCGGTAGACGCCGGTGGC+GGG | + | Chr2:22674182-22674201 | None:intergenic | 75.0% | |
| !! | CCGAGCCCGGTGGTGGAGTG+TGG | + | Chr2:22674330-22674349 | None:intergenic | 75.0% |
| ! | CCGCCACCGGCGTCTACCGG+AGG | - | Chr2:22674180-22674199 | MsG0280007897.01.T01:CDS | 80.0% |
| !!! | GACGGTGGTGCCGCCGAGCC+CGG | + | Chr2:22674343-22674362 | None:intergenic | 80.0% |
| !! | GGTGCCGCCGAGCCCGGTGG+TGG | + | Chr2:22674337-22674356 | None:intergenic | 85.0% |
| !!! | GGTGGTGCCGCCGAGCCCGG+TGG | + | Chr2:22674340-22674359 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr2 | gene | 22673895 | 22674509 | 22673895 | ID=MsG0280007897.01;Name=MsG0280007897.01 |
| Chr2 | mRNA | 22673895 | 22674509 | 22673895 | ID=MsG0280007897.01.T01;Parent=MsG0280007897.01;Name=MsG0280007897.01.T01;_AED=0.36;_eAED=0.36;_QI=0|-1|0|1|-1|1|1|0|204 |
| Chr2 | exon | 22673895 | 22674509 | 22673895 | ID=MsG0280007897.01.T01:exon:40314;Parent=MsG0280007897.01.T01 |
| Chr2 | CDS | 22673895 | 22674509 | 22673895 | ID=MsG0280007897.01.T01:cds;Parent=MsG0280007897.01.T01 |
| Gene Sequence |
| Protein sequence |