AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180005337.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005337.01.T01 MTR_1g097420 94.054 185 2 1 1 176 1 185 3.21e-127 357
MsG0180005337.01.T01 MTR_1g097420 82.075 212 2 1 1 176 1 212 1.10e-122 347
MsG0180005337.01.T01 MTR_4g012940 74.054 185 39 1 1 176 1 185 5.07e-100 288
MsG0180005337.01.T01 MTR_2g101890 73.626 182 39 1 4 176 6 187 5.65e-99 286
MsG0180005337.01.T01 MTR_8g092020 71.739 184 43 1 2 176 6 189 1.28e-97 283
MsG0180005337.01.T01 MTR_4g069850 72.432 185 42 1 1 176 1 185 3.26e-96 279
MsG0180005337.01.T01 MTR_6g039490 71.351 185 44 1 1 176 1 185 1.50e-91 268
MsG0180005337.01.T01 MTR_1452s0010 84.211 95 15 0 19 113 1 95 5.20e-56 173
MsG0180005337.01.T01 MTR_1663s0010 85.333 75 11 0 101 175 1 75 1.17e-41 136
MsG0180005337.01.T01 MTR_1686s0010 69.880 83 25 0 19 101 1 83 9.52e-41 134
MsG0180005337.01.T01 MTR_2g005510 38.068 176 86 5 1 160 1 169 1.51e-31 114
MsG0180005337.01.T01 MTR_8g036220 35.176 199 100 6 8 188 16 203 3.32e-31 114
MsG0180005337.01.T01 MTR_1g068730 36.893 206 108 7 8 204 15 207 3.66e-31 113
MsG0180005337.01.T01 MTR_1g068740 36.408 206 109 7 8 204 15 207 1.47e-30 112
MsG0180005337.01.T01 MTR_1g052475 39.394 165 84 4 8 163 15 172 1.47e-30 112
MsG0180005337.01.T01 MTR_1812s0010 64.865 74 26 0 101 174 1 74 1.62e-30 107
MsG0180005337.01.T01 MTR_7g405790 37.791 172 91 4 8 170 15 179 2.10e-30 112
MsG0180005337.01.T01 MTR_4g079350 38.272 162 84 4 8 160 13 167 2.10e-30 111
MsG0180005337.01.T01 MTR_2g096550 37.126 167 91 4 8 165 15 176 2.43e-30 111
MsG0180005337.01.T01 MTR_8g089985 37.576 165 87 4 8 163 17 174 3.16e-30 111
MsG0180005337.01.T01 MTR_6g021790 34.653 202 114 5 8 200 6 198 4.35e-30 110
MsG0180005337.01.T01 MTR_4g088090 37.037 162 86 4 8 160 13 167 6.17e-30 110
MsG0180005337.01.T01 MTR_3g086980 37.576 165 87 4 8 163 16 173 1.21e-29 110
MsG0180005337.01.T01 MTR_4g064897 35.758 165 90 4 8 163 12 169 1.76e-29 109
MsG0180005337.01.T01 MTR_8g006970 33.990 203 113 6 8 200 22 213 2.06e-29 109
MsG0180005337.01.T01 MTR_1g115325 37.126 167 90 4 8 165 15 175 2.65e-29 108
MsG0180005337.01.T01 MTR_8g103550 35.326 184 102 5 10 183 11 187 3.20e-29 108
MsG0180005337.01.T01 MTR_2g014990 37.037 162 86 4 8 160 13 167 3.82e-29 108
MsG0180005337.01.T01 MTR_2g005500 34.940 166 92 4 8 164 9 167 4.07e-29 108
MsG0180005337.01.T01 MTR_2g090865 38.554 166 84 5 8 163 11 168 4.10e-29 108
MsG0180005337.01.T01 MTR_7g100020 37.126 167 90 4 8 165 15 175 4.52e-29 108
MsG0180005337.01.T01 MTR_7g081700 33.663 202 114 6 8 200 8 198 6.16e-29 107
MsG0180005337.01.T01 MTR_3g069510 32.821 195 107 5 8 185 12 199 7.00e-29 107
MsG0180005337.01.T01 MTR_0262s0050 38.788 165 85 4 8 163 15 172 7.04e-29 108
MsG0180005337.01.T01 MTR_8g006970 36.145 166 90 4 8 164 8 166 9.86e-29 106
MsG0180005337.01.T01 MTR_2g075950 37.654 162 85 5 8 160 13 167 2.99e-28 106
MsG0180005337.01.T01 MTR_5g076590 36.970 165 88 4 10 165 12 169 3.30e-28 105
MsG0180005337.01.T01 MTR_8g031680 35.088 171 95 4 9 170 7 170 1.01e-27 104
MsG0180005337.01.T01 MTR_3g064390 36.970 165 88 4 10 165 12 169 1.14e-27 104
MsG0180005337.01.T01 MTR_7g051940 35.465 172 95 4 8 170 13 177 1.25e-27 104
MsG0180005337.01.T01 MTR_4g099470 36.207 174 98 5 28 200 13 174 3.40e-27 102
MsG0180005337.01.T01 MTR_5g013900 32.195 205 114 5 10 200 11 204 5.39e-27 102
MsG0180005337.01.T01 MTR_2g027660 35.119 168 93 4 8 166 6 166 3.42e-26 100
MsG0180005337.01.T01 MTR_2g083860 35.185 162 89 4 8 160 13 167 3.73e-26 100
MsG0180005337.01.T01 MTR_8g031870 32.558 172 100 4 3 165 1 165 5.56e-26 99.8
MsG0180005337.01.T01 MTR_8g090215 36.585 164 88 4 10 164 11 167 5.65e-26 100
MsG0180005337.01.T01 MTR_4g063160 36.095 169 91 5 8 165 15 177 1.07e-25 99.8
MsG0180005337.01.T01 MTR_1g078200 34.731 167 93 3 8 165 14 173 1.28e-25 99.8
MsG0180005337.01.T01 MTR_3g087160 35.366 164 90 3 10 164 11 167 1.36e-25 99.0
MsG0180005337.01.T01 MTR_4g098950 34.756 164 91 3 10 164 11 167 2.47e-25 98.2
MsG0180005337.01.T01 MTR_6g079550 34.969 163 90 4 8 161 12 167 6.04e-25 97.4
MsG0180005337.01.T01 MTR_8g031660 32.584 178 104 4 8 176 6 176 1.65e-24 96.3
MsG0180005337.01.T01 MTR_1g094220 35.928 167 90 5 9 165 32 191 2.01e-24 95.9
MsG0180005337.01.T01 MTR_8g027220 34.969 163 90 4 8 161 26 181 2.26e-24 96.7
MsG0180005337.01.T01 MTR_8g107070 34.637 179 99 5 8 175 14 185 9.16e-24 95.5
MsG0180005337.01.T01 MTR_7g117910 35.811 148 78 4 8 146 20 159 2.94e-23 93.2
MsG0180005337.01.T01 MTR_1g094220 35.185 162 88 5 9 160 32 186 3.40e-23 92.8
MsG0180005337.01.T01 MTR_1g094220 35.185 162 88 5 9 160 32 186 3.97e-23 92.4
MsG0180005337.01.T01 MTR_1g094220 35.185 162 88 5 9 160 32 186 9.69e-23 92.4
MsG0180005337.01.T01 MTR_8g031830 33.537 164 93 5 3 157 1 157 2.72e-22 90.1
MsG0180005337.01.T01 MTR_1g068730 37.398 123 64 2 8 121 15 133 4.11e-22 89.0
MsG0180005337.01.T01 MTR_3g064390 38.017 121 62 2 10 121 12 128 4.97e-22 88.6
MsG0180005337.01.T01 MTR_1g068740 37.398 123 64 2 8 121 15 133 6.13e-22 89.4
MsG0180005337.01.T01 MTR_5g036990 61.429 70 26 1 30 98 32 101 1.19e-21 86.3
MsG0180005337.01.T01 MTR_2g102060 31.515 165 97 4 10 165 12 169 3.92e-21 87.0
MsG0180005337.01.T01 MTR_8g093740 33.951 162 92 5 8 160 13 168 8.46e-21 86.7
MsG0180005337.01.T01 MTR_7g103070 34.568 162 88 6 10 160 18 172 1.13e-20 86.3
MsG0180005337.01.T01 MTR_3g096350 34.969 163 89 6 8 160 12 167 2.54e-20 85.1
MsG0180005337.01.T01 MTR_1g029450 34.969 163 89 6 8 160 17 172 4.84e-20 84.7
MsG0180005337.01.T01 MTR_3g107713 26.341 205 131 5 9 204 14 207 1.16e-19 84.0
MsG0180005337.01.T01 MTR_3g107707 25.854 205 132 5 9 204 14 207 5.05e-19 82.0
MsG0180005337.01.T01 MTR_8g093740 37.121 132 76 4 30 160 10 135 6.52e-19 80.9
MsG0180005337.01.T01 MTR_3g107717 27.108 166 102 4 9 165 14 169 7.66e-19 81.6
MsG0180005337.01.T01 MTR_2g093510 73.077 52 14 0 125 176 776 827 1.55e-18 84.0
MsG0180005337.01.T01 MTR_1g062760 33.540 161 92 5 9 160 15 169 1.72e-18 80.5
MsG0180005337.01.T01 MTR_1g090717 35.583 163 88 6 9 160 16 172 6.31e-18 79.0
MsG0180005337.01.T01 MTR_6g087980 29.101 189 110 6 8 178 6 188 8.22e-17 75.9
MsG0180005337.01.T01 MTR_3g096350 36.066 122 64 4 8 119 12 129 1.71e-16 73.6
MsG0180005337.01.T01 MTR_3g096350 36.066 122 64 4 8 119 12 129 1.71e-16 73.9
MsG0180005337.01.T01 MTR_4g113620 25.926 162 110 3 9 170 14 165 6.40e-15 70.9
MsG0180005337.01.T01 MTR_7g103070 36.066 122 69 5 41 160 2 116 3.63e-14 67.8
MsG0180005337.01.T01 MTR_2g090875 28.495 186 107 7 1 168 1 178 2.97e-13 66.2
MsG0180005337.01.T01 MTR_5g022600 29.775 178 99 8 1 160 1 170 5.35e-13 65.5
MsG0180005337.01.T01 MTR_4g073250 26.455 189 115 6 8 178 6 188 6.43e-13 65.1
MsG0180005337.01.T01 MTR_4g088055 28.495 186 107 7 1 168 1 178 7.07e-13 65.1
MsG0180005337.01.T01 MTR_8g075240 30.337 178 98 8 1 160 1 170 1.01e-12 64.7
MsG0180005337.01.T01 MTR_3g078260 26.455 189 115 6 8 178 8 190 1.33e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005337.01.T01 AT1G22740 81.622 185 25 1 1 176 1 185 2.50e-109 312
MsG0180005337.01.T01 AT4G09720 78.919 185 30 1 1 176 1 185 3.68e-107 306
MsG0180005337.01.T01 AT4G09720 76.842 190 30 2 1 176 1 190 1.20e-103 298
MsG0180005337.01.T01 AT4G09720 74.490 196 30 2 1 176 1 196 2.26e-103 297
MsG0180005337.01.T01 AT1G52280 74.457 184 38 1 1 175 1 184 1.85e-99 287
MsG0180005337.01.T01 AT3G16100 72.432 185 42 1 1 176 1 185 1.51e-97 282
MsG0180005337.01.T01 AT2G21880 71.429 182 43 1 2 174 3 184 1.07e-95 278
MsG0180005337.01.T01 AT3G18820 71.351 185 44 1 1 176 1 185 8.08e-95 275
MsG0180005337.01.T01 AT1G49300 68.649 185 49 1 1 176 1 185 3.25e-92 269
MsG0180005337.01.T01 AT1G49300 68.649 185 49 1 1 176 1 185 3.25e-92 269
MsG0180005337.01.T01 AT4G09720 82.667 150 26 0 27 176 2 151 3.45e-92 267
MsG0180005337.01.T01 AT4G09720 82.667 150 26 0 27 176 2 151 3.45e-92 267
MsG0180005337.01.T01 AT4G09720 82.667 150 26 0 27 176 2 151 3.45e-92 267
MsG0180005337.01.T01 AT2G21880 73.718 156 41 0 19 174 4 159 2.68e-87 256
MsG0180005337.01.T01 AT2G21880 73.718 156 41 0 19 174 4 159 2.68e-87 256
MsG0180005337.01.T01 AT2G21880 67.033 182 43 2 2 174 3 176 5.88e-86 253
MsG0180005337.01.T01 AT5G39620 56.983 179 68 1 6 175 3 181 1.13e-69 211
MsG0180005337.01.T01 AT3G12160 40.606 165 82 4 8 163 15 172 4.82e-32 116
MsG0180005337.01.T01 AT5G47960 38.182 165 86 4 8 163 15 172 2.35e-31 114
MsG0180005337.01.T01 AT2G33870 38.889 162 83 5 8 160 13 167 5.32e-31 113
MsG0180005337.01.T01 AT1G28550 38.889 162 83 4 8 160 13 167 2.35e-30 111
MsG0180005337.01.T01 AT1G09630 37.576 165 87 4 8 163 12 169 2.90e-30 111
MsG0180005337.01.T01 AT5G60860 37.654 162 85 4 8 160 13 167 4.64e-30 110
MsG0180005337.01.T01 AT5G45750 37.654 162 85 4 8 160 13 167 5.73e-30 110
MsG0180005337.01.T01 AT5G59840 37.725 167 89 4 8 165 15 175 6.51e-30 110
MsG0180005337.01.T01 AT3G15060 38.272 162 84 4 8 160 13 167 9.29e-30 110
MsG0180005337.01.T01 AT3G53610 37.126 167 90 4 8 165 15 175 9.88e-30 110
MsG0180005337.01.T01 AT3G53610 37.126 167 90 4 8 165 15 175 9.88e-30 110
MsG0180005337.01.T01 AT3G53610 37.126 167 90 4 8 165 15 175 9.88e-30 110
MsG0180005337.01.T01 AT3G11730 32.857 210 121 6 1 200 1 200 3.66e-29 108
MsG0180005337.01.T01 AT4G17530 35.227 176 95 5 8 171 8 176 7.65e-29 107
MsG0180005337.01.T01 AT1G05810 37.349 166 88 4 4 160 8 166 7.70e-29 107
MsG0180005337.01.T01 AT3G46060 36.527 167 91 4 8 165 15 175 1.10e-28 107
MsG0180005337.01.T01 AT3G46060 36.527 167 91 4 8 165 15 175 1.10e-28 107
MsG0180005337.01.T01 AT3G46060 36.527 167 91 4 8 165 15 175 1.10e-28 107
MsG0180005337.01.T01 AT5G47200 35.227 176 95 5 8 171 8 176 1.15e-28 107
MsG0180005337.01.T01 AT1G02130 33.005 203 115 6 8 200 8 199 1.52e-28 106
MsG0180005337.01.T01 AT5G59150 34.545 165 92 4 8 163 12 169 1.55e-28 107
MsG0180005337.01.T01 AT1G05810 37.349 166 88 4 4 160 54 212 1.80e-28 108
MsG0180005337.01.T01 AT2G31680 34.302 172 97 4 8 170 12 176 3.28e-28 106
MsG0180005337.01.T01 AT4G35860 30.769 208 126 5 8 204 6 206 5.66e-28 105
MsG0180005337.01.T01 AT1G16920 36.420 162 87 4 8 160 13 167 6.11e-28 105
MsG0180005337.01.T01 AT5G65270 36.970 165 88 4 8 163 17 174 6.65e-28 105
MsG0180005337.01.T01 AT4G18800 35.802 162 88 4 8 160 13 167 7.29e-28 105
MsG0180005337.01.T01 AT1G18200 36.364 165 89 5 8 163 13 170 8.35e-28 105
MsG0180005337.01.T01 AT2G43130 34.884 172 96 4 8 170 12 176 8.73e-28 105
MsG0180005337.01.T01 AT1G07410 33.939 165 93 4 8 163 12 169 1.73e-27 104
MsG0180005337.01.T01 AT3G46830 34.545 165 92 4 8 163 12 169 1.85e-27 104
MsG0180005337.01.T01 AT3G46830 34.545 165 92 4 8 163 12 169 1.85e-27 104
MsG0180005337.01.T01 AT1G73640 35.758 165 90 4 8 163 13 170 3.71e-27 103
MsG0180005337.01.T01 AT3G09900 38.323 167 88 4 8 165 15 175 3.95e-27 103
MsG0180005337.01.T01 AT2G44610 33.702 181 99 4 10 176 11 184 7.54e-27 102
MsG0180005337.01.T01 AT4G18430 32.121 165 96 4 8 163 13 170 8.37e-27 102
MsG0180005337.01.T01 AT4G39990 35.185 162 89 4 8 160 17 171 1.22e-26 102
MsG0180005337.01.T01 AT5G03520 37.725 167 89 4 8 165 15 175 1.52e-26 101
MsG0180005337.01.T01 AT4G17170 35.119 168 93 4 8 166 6 166 2.75e-26 100
MsG0180005337.01.T01 AT5G45130 36.364 165 89 4 10 165 12 169 7.05e-26 99.8
MsG0180005337.01.T01 AT4G17160 34.731 167 93 4 9 166 7 166 7.94e-26 99.8
MsG0180005337.01.T01 AT4G39890 34.545 165 93 4 9 164 10 168 8.79e-26 99.8
MsG0180005337.01.T01 AT4G19640 35.758 165 90 4 10 165 12 169 1.52e-25 99.0
MsG0180005337.01.T01 AT1G06400 34.568 162 90 3 8 160 13 167 4.01e-25 98.2
MsG0180005337.01.T01 AT1G01200 35.583 163 90 4 8 161 28 184 4.10e-25 98.6
MsG0180005337.01.T01 AT3G07410 34.302 172 97 3 8 170 12 176 5.18e-25 97.8
MsG0180005337.01.T01 AT5G45130 36.196 163 88 4 12 165 22 177 6.00e-25 97.4
MsG0180005337.01.T01 AT5G64990 36.000 175 88 5 10 171 9 172 7.71e-25 97.1
MsG0180005337.01.T01 AT5G03520 40.458 131 72 3 35 165 41 165 2.63e-24 95.9
MsG0180005337.01.T01 AT5G10260 31.579 190 105 5 10 183 11 191 3.51e-24 95.5
MsG0180005337.01.T01 AT5G47520 34.132 167 94 4 8 165 14 173 4.99e-24 95.5
MsG0180005337.01.T01 AT2G22290 34.756 164 91 4 10 164 11 167 2.82e-23 93.2
MsG0180005337.01.T01 AT3G54840 34.146 164 91 5 9 162 34 190 7.16e-23 91.7
MsG0180005337.01.T01 AT3G54840 34.132 167 93 5 9 165 34 193 1.59e-22 90.9
MsG0180005337.01.T01 AT4G35860 31.928 166 104 4 41 204 2 160 2.56e-22 89.4
MsG0180005337.01.T01 AT5G64990 34.615 182 88 6 10 171 9 179 3.41e-22 90.5
MsG0180005337.01.T01 AT3G54840 33.939 165 92 5 11 165 2 159 3.75e-22 89.0
MsG0180005337.01.T01 AT1G43890 36.810 163 86 6 8 160 13 168 8.60e-22 89.4
MsG0180005337.01.T01 AT1G43890 36.810 163 86 6 8 160 13 168 8.60e-22 89.4
MsG0180005337.01.T01 AT1G43890 36.810 163 86 6 8 160 13 168 8.60e-22 89.4
MsG0180005337.01.T01 AT4G19640 35.766 137 74 3 10 137 12 143 1.55e-21 87.0
MsG0180005337.01.T01 AT4G19640 37.500 120 62 2 10 120 12 127 7.94e-21 86.3
MsG0180005337.01.T01 AT5G03530 34.568 162 89 6 9 160 14 168 1.40e-19 83.6
MsG0180005337.01.T01 AT5G03530 34.568 162 89 6 9 160 14 168 1.40e-19 83.6
MsG0180005337.01.T01 AT5G55190 26.341 205 131 5 9 204 14 207 2.23e-19 83.2
MsG0180005337.01.T01 AT5G20010 25.366 205 133 5 9 204 14 207 3.91e-19 82.4
MsG0180005337.01.T01 AT5G59150 34.146 123 74 3 41 163 3 118 9.23e-19 80.1
MsG0180005337.01.T01 AT5G20020 27.108 166 102 4 9 165 14 169 9.77e-19 81.3
MsG0180005337.01.T01 AT4G28950 29.843 191 112 7 8 182 6 190 4.04e-18 79.3
MsG0180005337.01.T01 AT5G55080 25.301 166 105 4 9 165 14 169 7.22e-17 76.3
MsG0180005337.01.T01 AT3G09910 31.515 165 90 6 9 160 14 168 3.70e-16 74.3
MsG0180005337.01.T01 AT3G09910 31.515 165 90 6 9 160 14 168 3.70e-16 74.3
MsG0180005337.01.T01 AT3G09910 31.515 165 90 6 9 160 14 168 3.70e-16 74.3
MsG0180005337.01.T01 AT3G09910 31.515 165 90 6 9 160 14 168 6.16e-16 73.2
MsG0180005337.01.T01 AT3G09910 31.515 165 90 6 9 160 14 168 6.16e-16 73.2
MsG0180005337.01.T01 AT5G45970 27.933 179 105 6 8 168 6 178 1.93e-13 66.6
MsG0180005337.01.T01 AT1G20090 28.492 179 104 6 8 168 5 177 4.52e-13 65.5
MsG0180005337.01.T01 AT1G75840 29.032 186 106 7 1 168 1 178 4.98e-13 65.5
MsG0180005337.01.T01 AT4G35020 28.495 186 107 7 1 168 1 178 2.07e-12 63.9
MsG0180005337.01.T01 AT4G35020 28.495 186 107 7 1 168 1 178 2.07e-12 63.9
MsG0180005337.01.T01 AT4G35020 28.495 186 107 7 1 168 1 178 2.07e-12 63.9
MsG0180005337.01.T01 AT3G51300 28.652 178 101 7 1 160 1 170 2.57e-12 63.5
MsG0180005337.01.T01 AT3G48040 28.090 178 104 6 1 160 1 172 1.24e-11 62.0
MsG0180005337.01.T01 AT2G44690 27.485 171 100 6 8 160 18 182 1.35e-11 62.0
MsG0180005337.01.T01 AT2G17800 28.090 178 102 7 1 160 1 170 1.42e-11 61.6
MsG0180005337.01.T01 AT2G17800 28.090 178 102 7 1 160 1 170 1.42e-11 61.6
MsG0180005337.01.T01 AT4G35950 28.090 178 102 7 1 160 1 170 1.78e-11 61.2
MsG0180005337.01.T01 AT5G62880 27.528 178 105 6 1 160 1 172 1.98e-11 61.6
MsG0180005337.01.T01 AT5G62880 27.222 180 107 6 1 162 1 174 6.61e-11 59.7

Find 89 sgRNAs with CRISPR-Local

Find 357 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGTTTCCAAGCAATATAAA+TGG 0.260081 1:-90511003 None:intergenic
AAACAATAGTACTATCAAAA+AGG 0.261754 1:-90513781 None:intergenic
TGAAGCACTGCACAAATTAA+TGG 0.298156 1:-90513964 None:intergenic
AATGGAAATGCCCTTGTATC+AGG 0.343477 1:-90510985 None:intergenic
GGTGGATGTGCATGCTGATA+TGG 0.355032 1:+90513632 MsG0180005337.01.T01:three_prime_UTR
CTCGAACTACCTATGTATAA+TGG 0.355553 1:-90509091 None:intergenic
CAAGTTTAGTCAGCAGTATA+AGG 0.371559 1:+90509901 MsG0180005337.01.T01:CDS
GCATTTCCATTTATATTGCT+TGG 0.372285 1:+90510997 MsG0180005337.01.T01:CDS
TGATTTACCACGAATTAGAT+AGG 0.376006 1:+90513855 MsG0180005337.01.T01:three_prime_UTR
CGTTTGATTCACTTGACAAC+TGG 0.386540 1:+90510200 MsG0180005337.01.T01:CDS
TGCGTGAAATTGAGCTTAAT+TGG 0.388931 1:-90509285 None:intergenic
CCACCACTTTGCTCACTCTC+TGG 0.394400 1:-90513608 None:intergenic
CAGGCTGAGCAAGACCTAAC+TGG 0.395676 1:-90512072 None:intergenic
GGAAACAAGATTGATATTGA+TGG 0.401120 1:+90511018 MsG0180005337.01.T01:CDS
CCTGTTCACGCTCATTGGCC+AGG 0.406113 1:-90511248 None:intergenic
CTTTGAGACATCTGCAAAAG+AGG 0.406390 1:+90511182 MsG0180005337.01.T01:CDS
TTGCTCAAGGTCATTGTTCT+CGG 0.416277 1:+90509347 MsG0180005337.01.T01:CDS
CATGTCCTGTTCACGCTCAT+TGG 0.416752 1:-90511253 None:intergenic
CGTAGTTTGATTGTAACATA+AGG 0.419529 1:-90512122 None:intergenic
CAGCCTGTAGCTCAAGATGC+GGG 0.419613 1:+90512088 MsG0180005337.01.T01:CDS
CTCAAAAGGGGAAAAGGAAA+AGG 0.427399 1:-90509169 None:intergenic
ACTATCTTAGAATTCCAGTT+AGG 0.428027 1:+90512058 MsG0180005337.01.T01:CDS
CTGGAATTCTAAGATAGTAT+TGG 0.429430 1:-90512053 None:intergenic
TCACTCTCTGGAACCGCCTC+AGG 0.429595 1:-90513596 None:intergenic
CTTGAGAATGTCGCACTCCT+AGG 0.429629 1:+90513817 MsG0180005337.01.T01:three_prime_UTR
TTTGATTGTAACATAAGGCT+TGG 0.437320 1:-90512117 None:intergenic
AAGGACTGGTGTGCTTCAAA+AGG 0.438389 1:+90511147 MsG0180005337.01.T01:CDS
ATGATGATTCTGTATTGTAT+TGG 0.441236 1:-90509210 None:intergenic
CCTGGCCAATGAGCGTGAAC+AGG 0.444323 1:+90511248 MsG0180005337.01.T01:CDS
TCATTGTTCTCGGCGATAGC+GGG 0.448213 1:+90509357 MsG0180005337.01.T01:CDS
TTATGAATGAAAACGATTGA+AGG 0.448624 1:+90509128 MsG0180005337.01.T01:five_prime_UTR
ATGTCAACTTCGAACTCAAA+AGG 0.448824 1:-90509183 None:intergenic
TGGAAGTACTGAATAATTGC+AGG 0.450628 1:+90513652 MsG0180005337.01.T01:three_prime_UTR
TTCGAACTCAAAAGGGGAAA+AGG 0.453130 1:-90509175 None:intergenic
TTGATTGTAACATAAGGCTT+GGG 0.453437 1:-90512116 None:intergenic
AAAACGCAACTCCAAGACTT+TGG 0.454601 1:-90510126 None:intergenic
TCTAATTCGTGGTAAATCAA+TGG 0.457966 1:-90513851 None:intergenic
GCACGAGGAGTTTCTCAAAC+AGG 0.463788 1:+90510222 MsG0180005337.01.T01:CDS
TGTCATTTCTTTGTTTATGT+CGG 0.468037 1:+90509064 MsG0180005337.01.T01:five_prime_UTR
CAGCAGTATAAGGCAACAAT+TGG 0.468961 1:+90509911 MsG0180005337.01.T01:CDS
CGCAATGACATAGCTGGTTA+CGG 0.471076 1:-90509314 None:intergenic
TGTCAACTTCGAACTCAAAA+GGG 0.471997 1:-90509182 None:intergenic
AGTGAGCAAAGTGGTGGTGG+TGG 0.473564 1:+90513614 MsG0180005337.01.T01:three_prime_UTR
CAAGAGAGATTCCAAAGTCT+TGG 0.473805 1:+90510115 MsG0180005337.01.T01:CDS
AATTTGAAACACAGCATTGA+AGG 0.485101 1:-90513680 None:intergenic
CAGTGCTTCACATAGTTGAA+TGG 0.491680 1:+90513977 MsG0180005337.01.T01:three_prime_UTR
AGGCAAACCCTCCTGATACA+AGG 0.497414 1:+90510974 MsG0180005337.01.T01:intron
CTGTTCACGCTCATTGGCCA+GGG 0.503718 1:-90511247 None:intergenic
TGCTGAGTACATCATTCAAA+TGG 0.507107 1:-90513940 None:intergenic
CTTCAAGCCTATCTAATTCG+TGG 0.509000 1:-90513862 None:intergenic
TTTGCAGATGTCTCAAAGTA+GGG 0.510999 1:-90511177 None:intergenic
GAACTCTTAATGTTATAGGT+TGG 0.511384 1:+90514033 MsG0180005337.01.T01:three_prime_UTR
ACAATTTACCCACACAATCA+TGG 0.519807 1:-90513744 None:intergenic
CACTGTATGCCATGATTGTG+TGG 0.520653 1:+90513735 MsG0180005337.01.T01:three_prime_UTR
GTCATTGTTCTCGGCGATAG+CGG 0.540348 1:+90509356 MsG0180005337.01.T01:CDS
AGGACTGGTGTGCTTCAAAA+GGG 0.543802 1:+90511148 MsG0180005337.01.T01:CDS
TTGAGAATGTCGCACTCCTA+GGG 0.559696 1:+90513818 MsG0180005337.01.T01:three_prime_UTR
CGTCTGCGCAATGACATAGC+TGG 0.563049 1:-90509320 None:intergenic
ATTTGAAACACAGCATTGAA+GGG 0.563465 1:-90513679 None:intergenic
ATGAATTGTTTAGCGTTGAG+AGG 0.565012 1:-90509259 None:intergenic
CTGAGAAGAAAGCAAAGGAC+TGG 0.565046 1:+90511133 MsG0180005337.01.T01:CDS
ATGACATAGCTGGTTACGGT+GGG 0.565949 1:-90509310 None:intergenic
TGGTAGATATGGGACACTGC+TGG 0.568483 1:+90510091 MsG0180005337.01.T01:intron
GGCAAACCCTCCTGATACAA+GGG 0.575107 1:+90510975 MsG0180005337.01.T01:intron
ACAAGATTGATATTGATGGC+GGG 0.576782 1:+90511022 MsG0180005337.01.T01:CDS
AGCCTGTAGCTCAAGATGCG+GGG 0.577185 1:+90512089 MsG0180005337.01.T01:CDS
GTGTATTGCAAAGACTGCCC+TGG 0.577400 1:+90511230 MsG0180005337.01.T01:CDS
GAGAGTGAGCAAAGTGGTGG+TGG 0.590052 1:+90513611 MsG0180005337.01.T01:three_prime_UTR
TCAAAAGGGGAAAAGGAAAA+GGG 0.595793 1:-90509168 None:intergenic
GCCTGTAGCTCAAGATGCGG+GGG 0.598348 1:+90512090 MsG0180005337.01.T01:CDS
GTCGGTAATCCATTATACAT+AGG 0.607162 1:+90509082 MsG0180005337.01.T01:five_prime_UTR
CGTATGACGTGAACGTCATG+AGG 0.607447 1:+90510176 MsG0180005337.01.T01:CDS
AACAAGATTGATATTGATGG+CGG 0.609685 1:+90511021 MsG0180005337.01.T01:CDS
TTGGTGTTCAAATTGAGATG+TGG 0.611490 1:+90513900 MsG0180005337.01.T01:three_prime_UTR
GAGAACAATGACCTTGAGCA+AGG 0.617108 1:-90509345 None:intergenic
TCAGCCTGTAGCTCAAGATG+CGG 0.618783 1:+90512087 MsG0180005337.01.T01:CDS
GGAAATGCCCTTGTATCAGG+AGG 0.623997 1:-90510982 None:intergenic
GCGCAGACGAACCTTGCTCA+AGG 0.628869 1:+90509334 MsG0180005337.01.T01:CDS
GTCAACTTCGAACTCAAAAG+GGG 0.633038 1:-90509181 None:intergenic
TTCACTTGACAACTGGCACG+AGG 0.633292 1:+90510207 MsG0180005337.01.T01:CDS
GAAATGCCCTTGTATCAGGA+GGG 0.644750 1:-90510981 None:intergenic
CCAGAGAGTGAGCAAAGTGG+TGG 0.665389 1:+90513608 MsG0180005337.01.T01:three_prime_UTR
AAGTGATTTATAGCTAAACA+AGG 0.666523 1:-90509021 None:intergenic
GGTTTCTGAGAAGAAAGCAA+AGG 0.667441 1:+90511128 MsG0180005337.01.T01:intron
ACTGTATGCCATGATTGTGT+GGG 0.672430 1:+90513736 MsG0180005337.01.T01:three_prime_UTR
TGACATAGCTGGTTACGGTG+GGG 0.672648 1:-90509309 None:intergenic
AATGACATAGCTGGTTACGG+TGG 0.700311 1:-90509311 None:intergenic
TGATGGCGGGAATAGTCGAG+TGG 0.710562 1:+90511035 MsG0180005337.01.T01:CDS
GTTCCAGAGAGTGAGCAAAG+TGG 0.720662 1:+90513605 MsG0180005337.01.T01:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATAAAAACTTTATAAGA+TGG - Chr1:90509602-90509621 None:intergenic 10.0%
!! AAATAAAAACTTTATAAGAT+GGG - Chr1:90509601-90509620 None:intergenic 10.0%
!! ACAAATATTTAACAAATTAA+AGG - Chr1:90511418-90511437 None:intergenic 10.0%
!!! ACTAATTATAATGTTTTTAT+TGG + Chr1:90511369-90511388 MsG0180005337.01.T01:intron 10.0%
!! AGGATTGTTTATATAATAAT+AGG + Chr1:90510498-90510517 MsG0180005337.01.T01:intron 15.0%
!! ATAAGATAATTAGACATTTA+TGG - Chr1:90511103-90511122 None:intergenic 15.0%
!! TTTAAAAATTCCTATTTGAA+AGG + Chr1:90513277-90513296 MsG0180005337.01.T01:intron 15.0%
!!! AAAATTTTGTTTATTTGAGT+GGG + Chr1:90510053-90510072 MsG0180005337.01.T01:intron 15.0%
!!! AAAGTTTTGACTTTATTTTT+TGG + Chr1:90509759-90509778 MsG0180005337.01.T01:intron 15.0%
!!! AAGTTTTGACTTTATTTTTT+GGG + Chr1:90509760-90509779 MsG0180005337.01.T01:intron 15.0%
!!! AATAAATACATGCTTTTTTT+AGG + Chr1:90510478-90510497 MsG0180005337.01.T01:intron 15.0%
!!! ATAGATATTTTTTCCTTATT+GGG + Chr1:90509833-90509852 MsG0180005337.01.T01:intron 15.0%
!!! GAAATATTTTTTGTCAATAT+AGG - Chr1:90511710-90511729 None:intergenic 15.0%
!!! TATAGATATTTTTTCCTTAT+TGG + Chr1:90509832-90509851 MsG0180005337.01.T01:intron 15.0%
!!! TATTTTTTTTAGAAACAAAC+AGG - Chr1:90510759-90510778 None:intergenic 15.0%
!!! TCTTGATATTTTATAGTTTA+TGG + Chr1:90510334-90510353 MsG0180005337.01.T01:intron 15.0%
!!! TGAATATGATTTTAAGAAAA+TGG - Chr1:90511659-90511678 None:intergenic 15.0%
!!! TTTGTTTCTAAAAAAAATAC+TGG + Chr1:90510760-90510779 MsG0180005337.01.T01:intron 15.0%
!! AAACAATAGTACTATCAAAA+AGG - Chr1:90513784-90513803 None:intergenic 20.0%
!! AACAATAGTACTATCAAAAA+GGG - Chr1:90513783-90513802 None:intergenic 20.0%
!! ACATTTATGGACATAAATTA+AGG - Chr1:90511090-90511109 None:intergenic 20.0%
!! ACTCAATTTGAAAATTTAGA+AGG - Chr1:90513499-90513518 None:intergenic 20.0%
!! ATATATTAAAACAACGATGA+TGG - Chr1:90511835-90511854 None:intergenic 20.0%
!! ATCAAAGAAGTCTTTATATT+TGG - Chr1:90511865-90511884 None:intergenic 20.0%
!! ATGAAAAAGATAAGAGTTAT+TGG + Chr1:90513084-90513103 MsG0180005337.01.T01:intron 20.0%
!! CAATGAAAATGAAAGAAAAT+GGG - Chr1:90509460-90509479 None:intergenic 20.0%
!! CACATATCTAATTTAGTTAA+GGG - Chr1:90509876-90509895 None:intergenic 20.0%
!! GTTATAAAAAGATGAAAGAA+GGG - Chr1:90510808-90510827 None:intergenic 20.0%
!! TAAGTGATAATTAGTTAGTT+TGG + Chr1:90509688-90509707 MsG0180005337.01.T01:intron 20.0%
!! TATTAACAAAATACCAAGTT+AGG + Chr1:90512804-90512823 MsG0180005337.01.T01:intron 20.0%
!! TATTTCATAAAAAGTAAGAG+CGG + Chr1:90511625-90511644 MsG0180005337.01.T01:intron 20.0%
!! TCAAAGAAGTCTTTATATTT+GGG - Chr1:90511864-90511883 None:intergenic 20.0%
!! TCAAGAAAAAAATTAATAGC+AGG - Chr1:90510320-90510339 None:intergenic 20.0%
!! TTAAGTGTGAAATTAACAAA+CGG - Chr1:90509539-90509558 None:intergenic 20.0%
!!! AACTTCTGTTGTTTTTATTA+TGG + Chr1:90509724-90509743 MsG0180005337.01.T01:intron 20.0%
!!! ACATTCATTTTAATGTCTAT+TGG - Chr1:90510407-90510426 None:intergenic 20.0%
!!! AGTGTTCTATCTTTTAAATT+GGG + Chr1:90510726-90510745 MsG0180005337.01.T01:intron 20.0%
!!! CAAATTCTTCAAATTCTTTT+TGG + Chr1:90513697-90513716 MsG0180005337.01.T01:three_prime_UTR 20.0%
!!! CTCTTACTTTTTATGAAATA+AGG - Chr1:90511625-90511644 None:intergenic 20.0%
!!! GAAAATTTTGTTTATTTGAG+TGG + Chr1:90510052-90510071 MsG0180005337.01.T01:intron 20.0%
!!! GTTTTTATTTTTAACTCATC+TGG + Chr1:90509611-90509630 MsG0180005337.01.T01:intron 20.0%
!!! TAAAATTTTCTTCCTTTTCT+GGG + Chr1:90513448-90513467 MsG0180005337.01.T01:intron 20.0%
!!! TAATCAACTGATAAAGTTTT+GGG + Chr1:90510663-90510682 MsG0180005337.01.T01:intron 20.0%
!!! TAGGAATTTTTAAAGATGAT+TGG - Chr1:90513271-90513290 None:intergenic 20.0%
!!! TCATCGTTGTTTTAATATAT+TGG + Chr1:90511835-90511854 MsG0180005337.01.T01:intron 20.0%
!!! TTATGATACTACTAATTTTG+AGG - Chr1:90512331-90512350 None:intergenic 20.0%
!!! TTTGATAGTACTATTGTTTT+GGG + Chr1:90513785-90513804 MsG0180005337.01.T01:three_prime_UTR 20.0%
!!! TTTTGAACTCTTAATGTTAT+AGG + Chr1:90514029-90514048 MsG0180005337.01.T01:three_prime_UTR 20.0%
!!! TTTTGATAGTACTATTGTTT+TGG + Chr1:90513784-90513803 MsG0180005337.01.T01:three_prime_UTR 20.0%
! AAAGAAGTCTTTATATTTGG+GGG - Chr1:90511862-90511881 None:intergenic 25.0%
! AAGTGATTTATAGCTAAACA+AGG - Chr1:90509024-90509043 None:intergenic 25.0%
! AATAGGTTTATGTTAGTTGA+GGG + Chr1:90510515-90510534 MsG0180005337.01.T01:intron 25.0%
! AGATAATTTGATTCAGATGA+TGG + Chr1:90512265-90512284 MsG0180005337.01.T01:intron 25.0%
! ATATATTAGTCAGATTGTGA+AGG + Chr1:90510632-90510651 MsG0180005337.01.T01:intron 25.0%
! ATGATGATTCTGTATTGTAT+TGG - Chr1:90509213-90509232 None:intergenic 25.0%
! ATTATTACGATTTGAATGGA+AGG - Chr1:90509428-90509447 None:intergenic 25.0%
! ATTGAAAGATCAATGTCTTT+CGG - Chr1:90513182-90513201 None:intergenic 25.0%
! ATTTCACACTTAATTGTTCA+CGG + Chr1:90509546-90509565 MsG0180005337.01.T01:intron 25.0%
! CAAAGAAGTCTTTATATTTG+GGG - Chr1:90511863-90511882 None:intergenic 25.0%
! CATAATGATCAAATTAAGTG+TGG - Chr1:90510384-90510403 None:intergenic 25.0%
! CTAAAAGAGGATAAATTAGA+TGG - Chr1:90511732-90511751 None:intergenic 25.0%
! CTAAATAAGATAGGTTTAGA+AGG + Chr1:90513411-90513430 MsG0180005337.01.T01:intron 25.0%
! GAATCAAATTATCTTCTAGA+AGG - Chr1:90512259-90512278 None:intergenic 25.0%
! GAATGGAAGGAAAAAAAATA+CGG - Chr1:90509415-90509434 None:intergenic 25.0%
! GAATTGTATTAACCATTGTA+TGG + Chr1:90511391-90511410 MsG0180005337.01.T01:intron 25.0%
! GCAATGAAAATGAAAGAAAA+TGG - Chr1:90509461-90509480 None:intergenic 25.0%
! GCACATATCTAATTTAGTTA+AGG - Chr1:90509877-90509896 None:intergenic 25.0%
! GGTTATAAAAAGATGAAAGA+AGG - Chr1:90510809-90510828 None:intergenic 25.0%
! TAAGTGTGAAATTAACAAAC+GGG - Chr1:90509538-90509557 None:intergenic 25.0%
! TAATAGGTTTATGTTAGTTG+AGG + Chr1:90510514-90510533 MsG0180005337.01.T01:intron 25.0%
! TCACAATCTGACTAATATAT+AGG - Chr1:90510632-90510651 None:intergenic 25.0%
! TCGAATTATTACGATTTGAA+TGG - Chr1:90509432-90509451 None:intergenic 25.0%
! TGAGTTAAATGCATCAAAAT+TGG - Chr1:90513212-90513231 None:intergenic 25.0%
! TTATCTGTTAGAAAGAAGAA+TGG + Chr1:90512689-90512708 MsG0180005337.01.T01:intron 25.0%
! TTATGAATGAAAACGATTGA+AGG + Chr1:90509128-90509147 MsG0180005337.01.T01:five_prime_UTR 25.0%
! TTGTTTCCAAGCAATATAAA+TGG - Chr1:90511006-90511025 None:intergenic 25.0%
! TTTCATGCATCATATCTAAA+TGG - Chr1:90512740-90512759 None:intergenic 25.0%
! TTTGTTGATGTAGGTTATTT+AGG - Chr1:90512975-90512994 None:intergenic 25.0%
!! AAAATTTTCTTCCTTTTCTG+GGG + Chr1:90513449-90513468 MsG0180005337.01.T01:intron 25.0%
!! ACTTGGTATTTTGTTAATAG+AGG - Chr1:90512803-90512822 None:intergenic 25.0%
!! CAGTGTTCTATCTTTTAAAT+TGG + Chr1:90510725-90510744 MsG0180005337.01.T01:intron 25.0%
!! CTAAAATTTTCTTCCTTTTC+TGG + Chr1:90513447-90513466 MsG0180005337.01.T01:intron 25.0%
!! CTAATCAACTGATAAAGTTT+TGG + Chr1:90510662-90510681 MsG0180005337.01.T01:intron 25.0%
!! GTGTTCTATCTTTTAAATTG+GGG + Chr1:90510727-90510746 MsG0180005337.01.T01:intron 25.0%
!! TGAATTGCAGATATTTTCAA+GGG + Chr1:90513570-90513589 MsG0180005337.01.T01:intron 25.0%
!! TGTCATTTCTTTGTTTATGT+CGG + Chr1:90509064-90509083 MsG0180005337.01.T01:five_prime_UTR 25.0%
!! TTGAATTGCAGATATTTTCA+AGG + Chr1:90513569-90513588 MsG0180005337.01.T01:intron 25.0%
!! TTTTTCTCTGAATTTACAAC+AGG - Chr1:90511446-90511465 None:intergenic 25.0%
!!! AATTTCTTTTTCAGTTGCTA+AGG - Chr1:90512895-90512914 None:intergenic 25.0%
!!! ATTTCTTTTTCAGTTGCTAA+GGG - Chr1:90512894-90512913 None:intergenic 25.0%
!!! ATTTTTTGTCAATATAGGTG+TGG - Chr1:90511705-90511724 None:intergenic 25.0%
!!! GAAGTGATTTTTGTTTTCTT+TGG + Chr1:90513881-90513900 MsG0180005337.01.T01:three_prime_UTR 25.0%
AAATTGGGAGCAAAAGAAAA+TGG - Chr1:90512435-90512454 None:intergenic 30.0%
AACAAGATTGATATTGATGG+CGG + Chr1:90511021-90511040 MsG0180005337.01.T01:CDS 30.0%
AACCTTAAACAAGTCAAATC+AGG - Chr1:90509794-90509813 None:intergenic 30.0%
AAGAAGGGAAGTCAAATATA+AGG - Chr1:90510793-90510812 None:intergenic 30.0%
AATCAAACTACGTAGTATGT+AGG + Chr1:90512133-90512152 MsG0180005337.01.T01:intron 30.0%
AATTGGGAGCAAAAGAAAAT+GGG - Chr1:90512434-90512453 None:intergenic 30.0%
ACTATCTTAGAATTCCAGTT+AGG + Chr1:90512058-90512077 MsG0180005337.01.T01:CDS 30.0%
ACTCATTCATTGTTTACAAC+TGG + Chr1:90511771-90511790 MsG0180005337.01.T01:intron 30.0%
ACTCCTATTACAAACATCAA+TGG + Chr1:90513335-90513354 MsG0180005337.01.T01:intron 30.0%
ATTAAGGAAACTTAGAAGTG+AGG - Chr1:90511074-90511093 None:intergenic 30.0%
ATTACAAACATCAATGGTGA+AGG + Chr1:90513341-90513360 MsG0180005337.01.T01:intron 30.0%
CAAATTAAAGGTCCATACAA+TGG - Chr1:90511406-90511425 None:intergenic 30.0%
CGTAGTTTGATTGTAACATA+AGG - Chr1:90512125-90512144 None:intergenic 30.0%
CTAAATAGAAAGGAACTGTA+AGG + Chr1:90513309-90513328 MsG0180005337.01.T01:intron 30.0%
CTTACAAAAAGTCAGAATCT+TGG + Chr1:90510441-90510460 MsG0180005337.01.T01:intron 30.0%
CTTCATTATCCCTATGAAAT+AGG + Chr1:90512358-90512377 MsG0180005337.01.T01:intron 30.0%
GAACTCTTAATGTTATAGGT+TGG + Chr1:90514033-90514052 MsG0180005337.01.T01:three_prime_UTR 30.0%
GACATTAAAATGAATGTAGC+TGG + Chr1:90510410-90510429 MsG0180005337.01.T01:intron 30.0%
GAGGAGATTCTAAATAAGAT+AGG + Chr1:90513402-90513421 MsG0180005337.01.T01:intron 30.0%
GATCATATCTCTAATTAACG+TGG + Chr1:90511882-90511901 MsG0180005337.01.T01:intron 30.0%
GCATTTCCATTTATATTGCT+TGG + Chr1:90510997-90511016 MsG0180005337.01.T01:CDS 30.0%
GGAAACAAGATTGATATTGA+TGG + Chr1:90511018-90511037 MsG0180005337.01.T01:CDS 30.0%
GTATCTGCATCTAAATAGAA+AGG + Chr1:90513299-90513318 MsG0180005337.01.T01:intron 30.0%
TACGATCTTGTAAATCTCTA+TGG - Chr1:90511597-90511616 None:intergenic 30.0%
TCACCATTGATGTTTGTAAT+AGG - Chr1:90513341-90513360 None:intergenic 30.0%
TCTAATTCGTGGTAAATCAA+TGG - Chr1:90513854-90513873 None:intergenic 30.0%
TCTACCTAATGAGTTATTGA+CGG + Chr1:90512914-90512933 MsG0180005337.01.T01:intron 30.0%
TGATTTACCACGAATTAGAT+AGG + Chr1:90513855-90513874 MsG0180005337.01.T01:three_prime_UTR 30.0%
TGTCTAATTATCTTATGTGC+AGG + Chr1:90511107-90511126 MsG0180005337.01.T01:intron 30.0%
TTATGGTTATGACGAGAAAA+AGG + Chr1:90510351-90510370 MsG0180005337.01.T01:intron 30.0%
TTGATTGTAACATAAGGCTT+GGG - Chr1:90512119-90512138 None:intergenic 30.0%
TTGCTTTCTGTTCCAATAAT+AGG - Chr1:90512842-90512861 None:intergenic 30.0%
TTTCACACTTAATTGTTCAC+GGG + Chr1:90509547-90509566 MsG0180005337.01.T01:intron 30.0%
TTTGATTGTAACATAAGGCT+TGG - Chr1:90512120-90512139 None:intergenic 30.0%
! AAATTTTCTTCCTTTTCTGG+GGG + Chr1:90513450-90513469 MsG0180005337.01.T01:intron 30.0%
! AACACTTTTGTTGCATTTTG+TGG + Chr1:90510268-90510287 MsG0180005337.01.T01:intron 30.0%
! AATTTGAAACACAGCATTGA+AGG - Chr1:90513683-90513702 None:intergenic 30.0%
! AGTTTTCATTCCCATGAAAT+AGG + Chr1:90512298-90512317 MsG0180005337.01.T01:intron 30.0%
! ATTTGAAACACAGCATTGAA+GGG - Chr1:90513682-90513701 None:intergenic 30.0%
! TCTTGTGAAGATTCTAAAAG+AGG - Chr1:90511745-90511764 None:intergenic 30.0%
! TTCTTTCATTTTCATTGCCA+GGG + Chr1:90509463-90509482 MsG0180005337.01.T01:intron 30.0%
! TTTCTTTCATTTTCATTGCC+AGG + Chr1:90509462-90509481 MsG0180005337.01.T01:intron 30.0%
! TTTGTTGCATTTTGTGGTTT+AGG + Chr1:90510274-90510293 MsG0180005337.01.T01:intron 30.0%
!! AGACCTATTGGTTCAAAAAT+TGG - Chr1:90512451-90512470 None:intergenic 30.0%
!! ATGATATGGTTGGTAGATAT+GGG + Chr1:90510081-90510100 MsG0180005337.01.T01:intron 30.0%
!! CAACAAAAGTGTTGTTTACA+AGG - Chr1:90510261-90510280 None:intergenic 30.0%
!! CTGGAATTCTAAGATAGTAT+TGG - Chr1:90512056-90512075 None:intergenic 30.0%
!! GACCTATTGGTTCAAAAATT+GGG - Chr1:90512450-90512469 None:intergenic 30.0%
!! TATGATATGGTTGGTAGATA+TGG + Chr1:90510080-90510099 MsG0180005337.01.T01:intron 30.0%
!!! ATAGTACTATTGTTTTGGGA+AGG + Chr1:90513789-90513808 MsG0180005337.01.T01:three_prime_UTR 30.0%
!!! GCTTTTGTTTTTTCTGTTCT+TGG + Chr1:90510021-90510040 MsG0180005337.01.T01:intron 30.0%
!!! TGTTTTAGCATGCCTATTAT+TGG + Chr1:90512827-90512846 MsG0180005337.01.T01:intron 30.0%
!!! TTTCTTTTTCAGTTGCTAAG+GGG - Chr1:90512893-90512912 None:intergenic 30.0%
AAAAGTTGGCAAATGCCATA+TGG + Chr1:90513130-90513149 MsG0180005337.01.T01:intron 35.0%
AAAGTTGGCAAATGCCATAT+GGG + Chr1:90513131-90513150 MsG0180005337.01.T01:intron 35.0%
AAGAATGGAAGTTAGTTCAC+GGG + Chr1:90512704-90512723 MsG0180005337.01.T01:intron 35.0%
AAGTGCCTCAAAATTAATGC+CGG + Chr1:90512383-90512402 MsG0180005337.01.T01:intron 35.0%
AATAGGTCTGTCTTACTCAA+AGG + Chr1:90512462-90512481 MsG0180005337.01.T01:intron 35.0%
AATCTGTTCTTTCATGTTGC+TGG - Chr1:90513382-90513401 None:intergenic 35.0%
ACAATCTGATCAGTAAGAGA+CGG - Chr1:90510845-90510864 None:intergenic 35.0%
ACAATTTACCCACACAATCA+TGG - Chr1:90513747-90513766 None:intergenic 35.0%
ACTGATATGAATTGAAGCTG+TGG + Chr1:90511297-90511316 MsG0180005337.01.T01:intron 35.0%
AGGCACTTAACCTATTTCAT+AGG - Chr1:90512311-90512330 None:intergenic 35.0%
AGGCACTTAACCTATTTCAT+GGG - Chr1:90512311-90512330 None:intergenic 35.0%
AGGGACACAATGTGATAATT+TGG + Chr1:90510595-90510614 MsG0180005337.01.T01:intron 35.0%
ATAGCAGAAACAATGTGCAA+TGG - Chr1:90511810-90511829 None:intergenic 35.0%
ATAGGTCTGTCTTACTCAAA+GGG + Chr1:90512463-90512482 MsG0180005337.01.T01:intron 35.0%
ATGTCAACTTCGAACTCAAA+AGG - Chr1:90509186-90509205 None:intergenic 35.0%
ATTAGTCAGATTGTGAAGGA+GGG + Chr1:90510636-90510655 MsG0180005337.01.T01:intron 35.0%
CAAAAGGCTAAATCCCAATA+AGG - Chr1:90509849-90509868 None:intergenic 35.0%
CAACATGAAAGAACAGATTG+AGG + Chr1:90513383-90513402 MsG0180005337.01.T01:intron 35.0%
CAAGTTTAGTCAGCAGTATA+AGG + Chr1:90509901-90509920 MsG0180005337.01.T01:CDS 35.0%
CAGTATCTATTGAAAGTCTG+CGG + Chr1:90512178-90512197 MsG0180005337.01.T01:intron 35.0%
CTATCAAAAAGGGAACATCA+AGG - Chr1:90513773-90513792 None:intergenic 35.0%
CTCGAACTACCTATGTATAA+TGG - Chr1:90509094-90509113 None:intergenic 35.0%
CTTATCCTAGATCTGTCATA+TGG - Chr1:90512031-90512050 None:intergenic 35.0%
GAAGAATGGAAGTTAGTTCA+CGG + Chr1:90512703-90512722 MsG0180005337.01.T01:intron 35.0%
GAGTTGGGATGAAATTATAC+AGG + Chr1:90512636-90512655 MsG0180005337.01.T01:intron 35.0%
GATGCAGATACCTTTCAAAT+AGG - Chr1:90513290-90513309 None:intergenic 35.0%
GATGCATGTACTAAGATTTG+AGG - Chr1:90513477-90513496 None:intergenic 35.0%
GGCACTTAACCTATTTCATA+GGG - Chr1:90512370-90512389 None:intergenic 35.0%
GTCGGTAATCCATTATACAT+AGG + Chr1:90509082-90509101 MsG0180005337.01.T01:five_prime_UTR 35.0%
TATAATTTCATCCCAACTCC+AGG - Chr1:90512635-90512654 None:intergenic 35.0%
TATTAGTCAGATTGTGAAGG+AGG + Chr1:90510635-90510654 MsG0180005337.01.T01:intron 35.0%
TCAAAAGGGGAAAAGGAAAA+GGG - Chr1:90509171-90509190 None:intergenic 35.0%
TCTCTGAATTTACAACAGGA+TGG - Chr1:90511442-90511461 None:intergenic 35.0%
TGCGTGAAATTGAGCTTAAT+TGG - Chr1:90509288-90509307 None:intergenic 35.0%
TGCTGAGTACATCATTCAAA+TGG - Chr1:90513943-90513962 None:intergenic 35.0%
TGTCAACTTCGAACTCAAAA+GGG - Chr1:90509185-90509204 None:intergenic 35.0%
TTATGTTCTTCTTGTGACAC+AGG + Chr1:90510954-90510973 MsG0180005337.01.T01:intron 35.0%
TTCAAAAGATTAGAGTGCAC+AGG + Chr1:90513107-90513126 MsG0180005337.01.T01:intron 35.0%
TTCATAGACTTCACTTGAGA+CGG - Chr1:90513069-90513088 None:intergenic 35.0%
TTTAGTTAAGGGTCCACAAA+AGG - Chr1:90509865-90509884 None:intergenic 35.0%
TTTGAGTAAGACAGACCTAT+TGG - Chr1:90512463-90512482 None:intergenic 35.0%
TTTGCAGATGTCTCAAAGTA+GGG - Chr1:90511180-90511199 None:intergenic 35.0%
! AATTTTCTTCCTTTTCTGGG+GGG + Chr1:90513451-90513470 MsG0180005337.01.T01:intron 35.0%
! ACAAGATTGATATTGATGGC+GGG + Chr1:90511022-90511041 MsG0180005337.01.T01:CDS 35.0%
! ATGAATTGTTTAGCGTTGAG+AGG - Chr1:90509262-90509281 None:intergenic 35.0%
! ATTGAGTGTTTTCAGCTTGT+GGG - Chr1:90511534-90511553 None:intergenic 35.0%
! CTCCCAATTTTTGAACCAAT+AGG + Chr1:90512445-90512464 MsG0180005337.01.T01:intron 35.0%
! CTTGTTTAAGGTTGTGTTTG+AGG + Chr1:90509801-90509820 MsG0180005337.01.T01:intron 35.0%
! GGTTGGGTTAAACAAGTTTT+TGG + Chr1:90513029-90513048 MsG0180005337.01.T01:intron 35.0%
! TCAACTTGCTTTGTTGATGT+AGG - Chr1:90512984-90513003 None:intergenic 35.0%
! TGCAATCCAACTTGTAGTTT+TGG + Chr1:90513008-90513027 MsG0180005337.01.T01:intron 35.0%
! TTGAGTGGGTTTGTATGATA+TGG + Chr1:90510067-90510086 MsG0180005337.01.T01:intron 35.0%
! TTGGAGTTGCGTTTTATAGA+GGG + Chr1:90510134-90510153 MsG0180005337.01.T01:CDS 35.0%
! TTGGTGTTCAAATTGAGATG+TGG + Chr1:90513900-90513919 MsG0180005337.01.T01:three_prime_UTR 35.0%
! TTTTGCAGATGTCTCAAAGT+AGG - Chr1:90511181-90511200 None:intergenic 35.0%
!! ATATTTTCAAGGGATTCCTG+AGG + Chr1:90513580-90513599 MsG0180005337.01.T01:exon 35.0%
!! CACCTGATTTGACTTGTTTA+AGG + Chr1:90509789-90509808 MsG0180005337.01.T01:intron 35.0%
!! TATTGGGATTTAGCCTTTTG+TGG + Chr1:90509849-90509868 MsG0180005337.01.T01:intron 35.0%
!! TGAAGCACTGCACAAATTAA+TGG - Chr1:90513967-90513986 None:intergenic 35.0%
!! TGGAAGTACTGAATAATTGC+AGG + Chr1:90513652-90513671 MsG0180005337.01.T01:three_prime_UTR 35.0%
!!! ATCCAACTTGTAGTTTTGGT+TGG + Chr1:90513012-90513031 MsG0180005337.01.T01:intron 35.0%
!!! ATCTAGTTTTCGACGTGAAA+GGG - Chr1:90511920-90511939 None:intergenic 35.0%
!!! TCCAACTTGTAGTTTTGGTT+GGG + Chr1:90513013-90513032 MsG0180005337.01.T01:intron 35.0%
AAAACGCAACTCCAAGACTT+TGG - Chr1:90510129-90510148 None:intergenic 40.0%
AACAAACGGGTAAGAAACCA+AGG - Chr1:90509525-90509544 None:intergenic 40.0%
AAGACAATAGATGCTTAGCC+TGG + Chr1:90512614-90512633 MsG0180005337.01.T01:intron 40.0%
AAGTTGGCAAATGCCATATG+GGG + Chr1:90513132-90513151 MsG0180005337.01.T01:intron 40.0%
AATGGAAATGCCCTTGTATC+AGG - Chr1:90510988-90511007 None:intergenic 40.0%
ACCCAACCAAAACTACAAGT+TGG - Chr1:90513017-90513036 None:intergenic 40.0%
ACTACGTAGTATGTAGGAAG+AGG + Chr1:90512139-90512158 MsG0180005337.01.T01:intron 40.0%
ACTGTATGCCATGATTGTGT+GGG + Chr1:90513736-90513755 MsG0180005337.01.T01:three_prime_UTR 40.0%
ACTTGTAGTTGAGACTTGAG+AGG + Chr1:90510575-90510594 MsG0180005337.01.T01:intron 40.0%
AGAACACTGCTGATGTTTGA+GGG - Chr1:90510714-90510733 None:intergenic 40.0%
AGTGAACATATCAGTGACTG+AGG - Chr1:90511574-90511593 None:intergenic 40.0%
ATAGGCATGCTATACTAGGA+TGG + Chr1:90512950-90512969 MsG0180005337.01.T01:intron 40.0%
ATGTCTAGTCCTAGACATGA+GGG - Chr1:90511983-90512002 None:intergenic 40.0%
ATTACAACACCCTCATGTCT+AGG + Chr1:90511971-90511990 MsG0180005337.01.T01:intron 40.0%
ATTGAAAGTCTGCGGTAATG+TGG + Chr1:90512186-90512205 MsG0180005337.01.T01:intron 40.0%
CAAGAGAGATTCCAAAGTCT+TGG + Chr1:90510115-90510134 MsG0180005337.01.T01:CDS 40.0%
CACAATAGGCATGCTATACT+AGG + Chr1:90512946-90512965 MsG0180005337.01.T01:intron 40.0%
CAGCAGTATAAGGCAACAAT+TGG + Chr1:90509911-90509930 MsG0180005337.01.T01:CDS 40.0%
CAGTGCTTCACATAGTTGAA+TGG + Chr1:90513977-90513996 MsG0180005337.01.T01:three_prime_UTR 40.0%
CGTTTGATTCACTTGACAAC+TGG + Chr1:90510200-90510219 MsG0180005337.01.T01:CDS 40.0%
CTAGTATAGCATGCCTATTG+TGG - Chr1:90512948-90512967 None:intergenic 40.0%
CTCAAAAGGGGAAAAGGAAA+AGG - Chr1:90509172-90509191 None:intergenic 40.0%
CTTCAAGCCTATCTAATTCG+TGG - Chr1:90513865-90513884 None:intergenic 40.0%
CTTGTAGTTGAGACTTGAGA+GGG + Chr1:90510576-90510595 MsG0180005337.01.T01:intron 40.0%
GCATGCTAAAACACCTAACT+TGG - Chr1:90512820-90512839 None:intergenic 40.0%
GGGAAAATGTGACAAAAGCA+AGG - Chr1:90512414-90512433 None:intergenic 40.0%
GTCAACTTCGAACTCAAAAG+GGG - Chr1:90509184-90509203 None:intergenic 40.0%
GTGGGTTTGTATGATATGGT+TGG + Chr1:90510071-90510090 MsG0180005337.01.T01:intron 40.0%
TACATCTGCCAATGCTCAAA+TGG - Chr1:90510689-90510708 None:intergenic 40.0%
TAGAACACTGCTGATGTTTG+AGG - Chr1:90510715-90510734 None:intergenic 40.0%
TATAGCATGCCTATTGTGGT+AGG - Chr1:90512944-90512963 None:intergenic 40.0%
TCCTTGAATAGTGCTCCTTA+GGG + Chr1:90511493-90511512 MsG0180005337.01.T01:intron 40.0%
TGGAACAGAAAGCAAGCTTT+GGG + Chr1:90512847-90512866 MsG0180005337.01.T01:intron 40.0%
TGTGACCATATGACAGATCT+AGG + Chr1:90512023-90512042 MsG0180005337.01.T01:intron 40.0%
TTAGAGTGCACAGGAAAAGT+TGG + Chr1:90513116-90513135 MsG0180005337.01.T01:intron 40.0%
TTCGAACTCAAAAGGGGAAA+AGG - Chr1:90509178-90509197 None:intergenic 40.0%
TTGAAAGTCTGCGGTAATGT+GGG + Chr1:90512187-90512206 MsG0180005337.01.T01:intron 40.0%
TTGCTCAAGGTCATTGTTCT+CGG + Chr1:90509347-90509366 MsG0180005337.01.T01:CDS 40.0%
TTGGAACAGAAAGCAAGCTT+TGG + Chr1:90512846-90512865 MsG0180005337.01.T01:intron 40.0%
TTGGCCGTCAATAACTCATT+AGG - Chr1:90512921-90512940 None:intergenic 40.0%
! ACTCACCGGCATTAATTTTG+AGG - Chr1:90512391-90512410 None:intergenic 40.0%
! CAATGGAACATGTTTTCCCT+AGG - Chr1:90513837-90513856 None:intergenic 40.0%
! CATTGAGTGTTTTCAGCTTG+TGG - Chr1:90511535-90511554 None:intergenic 40.0%
! CTTGGAGTTGCGTTTTATAG+AGG + Chr1:90510133-90510152 MsG0180005337.01.T01:CDS 40.0%
! GAGGCACTTAACCTATTTCA+TGG - Chr1:90512312-90512331 None:intergenic 40.0%
! GGTTTCTGAGAAGAAAGCAA+AGG + Chr1:90511128-90511147 MsG0180005337.01.T01:intron 40.0%
! TGGAGTTGCGTTTTATAGAG+GGG + Chr1:90510135-90510154 MsG0180005337.01.T01:CDS 40.0%
! TTCATTTTCATTGCCAGGGT+TGG + Chr1:90509467-90509486 MsG0180005337.01.T01:intron 40.0%
!! AAATACGGTGTTGCAGAGAA+AGG - Chr1:90509400-90509419 None:intergenic 40.0%
!! ACGAGGATACTGATTCATCA+AGG - Chr1:90509501-90509520 None:intergenic 40.0%
!! AGACATGAGGGTGTTGTAAT+TGG - Chr1:90511971-90511990 None:intergenic 40.0%
!! AGGATACTGATTCATCAAGG+AGG - Chr1:90509498-90509517 None:intergenic 40.0%
!! CTTTGAGACATCTGCAAAAG+AGG + Chr1:90511182-90511201 MsG0180005337.01.T01:CDS 40.0%
!! GACATGAGGGTGTTGTAATT+GGG - Chr1:90511970-90511989 None:intergenic 40.0%
!! TGATTAGCCTTCCAACTTAC+TGG + Chr1:90510906-90510925 MsG0180005337.01.T01:intron 40.0%
!!! GATCTAGTTTTCGACGTGAA+AGG - Chr1:90511921-90511940 None:intergenic 40.0%
AAATGCCATATGGGGACTTG+GGG + Chr1:90513140-90513159 MsG0180005337.01.T01:intron 45.0%
AATGACATAGCTGGTTACGG+TGG - Chr1:90509314-90509333 None:intergenic 45.0%
AGACTCGTCACACTACAAGT+GGG + Chr1:90509971-90509990 MsG0180005337.01.T01:intron 45.0%
ATAGATGCTTAGCCTGGAGT+TGG + Chr1:90512620-90512639 MsG0180005337.01.T01:intron 45.0%
ATCCGCTGCTTCAAAAGGTT+TGG - Chr1:90512565-90512584 None:intergenic 45.0%
ATGACATAGCTGGTTACGGT+GGG - Chr1:90509313-90509332 None:intergenic 45.0%
CAAATGCCATATGGGGACTT+GGG + Chr1:90513139-90513158 MsG0180005337.01.T01:intron 45.0%
CACTGTATGCCATGATTGTG+TGG + Chr1:90513735-90513754 MsG0180005337.01.T01:three_prime_UTR 45.0%
CAGTTGCTAAGGGGAAAGTA+AGG - Chr1:90512884-90512903 None:intergenic 45.0%
CGCAATGACATAGCTGGTTA+CGG - Chr1:90509317-90509336 None:intergenic 45.0%
CGTAGTATGTAGGAAGAGGA+TGG + Chr1:90512143-90512162 MsG0180005337.01.T01:intron 45.0%
CTCCTTGAATAGTGCTCCTT+AGG + Chr1:90511492-90511511 MsG0180005337.01.T01:intron 45.0%
CTGAGAAGAAAGCAAAGGAC+TGG + Chr1:90511133-90511152 MsG0180005337.01.T01:CDS 45.0%
GAAATGCCCTTGTATCAGGA+GGG - Chr1:90510984-90511003 None:intergenic 45.0%
GAATCAGTATCCTCGTTCCT+TGG + Chr1:90509505-90509524 MsG0180005337.01.T01:intron 45.0%
GAGAACAATGACCTTGAGCA+AGG - Chr1:90509348-90509367 None:intergenic 45.0%
GATGTCTAGTCCTAGACATG+AGG - Chr1:90511984-90512003 None:intergenic 45.0%
GCGGATTCACATGAAAATGC+TGG + Chr1:90512579-90512598 MsG0180005337.01.T01:intron 45.0%
GGAACAGAAAGCAAGCTTTG+GGG + Chr1:90512848-90512867 MsG0180005337.01.T01:intron 45.0%
GGTGAAGGAGTTCTCTAAAC+TGG + Chr1:90513356-90513375 MsG0180005337.01.T01:intron 45.0%
GTGAGACAAGTCCAGTAAGT+TGG - Chr1:90510920-90510939 None:intergenic 45.0%
TAGATGCTTAGCCTGGAGTT+GGG + Chr1:90512621-90512640 MsG0180005337.01.T01:intron 45.0%
TGACAAAAGCAAGGACTCAC+CGG - Chr1:90512405-90512424 None:intergenic 45.0%
TGCAGAGAAAGGAGGGAAAA+AGG - Chr1:90509389-90509408 None:intergenic 45.0%
TGTGAATCCGCTGCTTCAAA+AGG - Chr1:90512570-90512589 None:intergenic 45.0%
TTGAGAATGTCGCACTCCTA+GGG + Chr1:90513818-90513837 MsG0180005337.01.T01:three_prime_UTR 45.0%
! AAGGACTGGTGTGCTTCAAA+AGG + Chr1:90511147-90511166 MsG0180005337.01.T01:CDS 45.0%
! AGAGACGGAGCATTATCACA+AGG - Chr1:90510830-90510849 None:intergenic 45.0%
! AGGACTGGTGTGCTTCAAAA+GGG + Chr1:90511148-90511167 MsG0180005337.01.T01:CDS 45.0%
! AGTTGCGTTTTATAGAGGGG+CGG + Chr1:90510138-90510157 MsG0180005337.01.T01:CDS 45.0%
! GAACAGAAAGCAAGCTTTGG+GGG + Chr1:90512849-90512868 MsG0180005337.01.T01:intron 45.0%
! GACAAGTCCAGTAAGTTGGA+AGG - Chr1:90510916-90510935 None:intergenic 45.0%
!! AACAGAAAGCAAGCTTTGGG+GGG + Chr1:90512850-90512869 MsG0180005337.01.T01:intron 45.0%
!! GTTTTGGGCCATTTGAGCAT+TGG + Chr1:90510678-90510697 MsG0180005337.01.T01:intron 45.0%
!! TCCCTAAGGAGCACTATTCA+AGG - Chr1:90511497-90511516 None:intergenic 45.0%
!! TTTTCAAGGGATTCCTGAGG+CGG + Chr1:90513583-90513602 MsG0180005337.01.T01:three_prime_UTR 45.0%
!!! CACCAAACCTTTTGAAGCAG+CGG + Chr1:90512560-90512579 MsG0180005337.01.T01:intron 45.0%
AGGACTAGACATCTCGAGTG+TGG + Chr1:90511991-90512010 MsG0180005337.01.T01:intron 50.0%
AGGCAAACCCTCCTGATACA+AGG + Chr1:90510974-90510993 MsG0180005337.01.T01:intron 50.0%
CAGACTCGTCACACTACAAG+TGG + Chr1:90509970-90509989 MsG0180005337.01.T01:intron 50.0%
CATGTCCTGTTCACGCTCAT+TGG - Chr1:90511256-90511275 None:intergenic 50.0%
CGTATGACGTGAACGTCATG+AGG + Chr1:90510176-90510195 MsG0180005337.01.T01:CDS 50.0%
CTGAACAGGGATCTTCCCTA+AGG - Chr1:90511511-90511530 None:intergenic 50.0%
CTTGAGAATGTCGCACTCCT+AGG + Chr1:90513817-90513836 MsG0180005337.01.T01:three_prime_UTR 50.0%
GCAAATGCCATATGGGGACT+TGG + Chr1:90513138-90513157 MsG0180005337.01.T01:intron 50.0%
GCACGAGGAGTTTCTCAAAC+AGG + Chr1:90510222-90510241 MsG0180005337.01.T01:CDS 50.0%
GCATGCCTATTGTGGTAGGT+TGG - Chr1:90512940-90512959 None:intergenic 50.0%
GGAAATGCCCTTGTATCAGG+AGG - Chr1:90510985-90511004 None:intergenic 50.0%
GGCAAACCCTCCTGATACAA+GGG + Chr1:90510975-90510994 MsG0180005337.01.T01:intron 50.0%
GGGTAAGAAACCAAGGAACG+AGG - Chr1:90509518-90509537 None:intergenic 50.0%
GGTGGATGTGCATGCTGATA+TGG + Chr1:90513632-90513651 MsG0180005337.01.T01:three_prime_UTR 50.0%
GTCATTGTTCTCGGCGATAG+CGG + Chr1:90509356-90509375 MsG0180005337.01.T01:CDS 50.0%
GTGTATTGCAAAGACTGCCC+TGG + Chr1:90511230-90511249 MsG0180005337.01.T01:CDS 50.0%
GTTCCAGAGAGTGAGCAAAG+TGG + Chr1:90513605-90513624 MsG0180005337.01.T01:three_prime_UTR 50.0%
TCAGCCTGTAGCTCAAGATG+CGG + Chr1:90512087-90512106 MsG0180005337.01.T01:CDS 50.0%
TCATCGACCAACCCTCCTTT+GGG - Chr1:90512778-90512797 None:intergenic 50.0%
TCATTGTTCTCGGCGATAGC+GGG + Chr1:90509357-90509376 MsG0180005337.01.T01:CDS 50.0%
TCTACGTCAACCTAGCCCAA+AGG + Chr1:90512760-90512779 MsG0180005337.01.T01:intron 50.0%
TGACATAGCTGGTTACGGTG+GGG - Chr1:90509312-90509331 None:intergenic 50.0%
TGGTAGATATGGGACACTGC+TGG + Chr1:90510091-90510110 MsG0180005337.01.T01:intron 50.0%
TTCACTTGACAACTGGCACG+AGG + Chr1:90510207-90510226 MsG0180005337.01.T01:CDS 50.0%
TTCATCGACCAACCCTCCTT+TGG - Chr1:90512779-90512798 None:intergenic 50.0%
! CAAGGAGGTTTTTCCAACCC+TGG - Chr1:90509483-90509502 None:intergenic 50.0%
! TCTAGAACGTGATCGAACGC+AGG + Chr1:90511941-90511960 MsG0180005337.01.T01:intron 50.0%
! TTCAGCTTGTGGGCTGAACA+GGG - Chr1:90511524-90511543 None:intergenic 50.0%
! TTTCAGCTTGTGGGCTGAAC+AGG - Chr1:90511525-90511544 None:intergenic 50.0%
!! ACGGTGTTGCAGAGAAAGGA+GGG - Chr1:90509396-90509415 None:intergenic 50.0%
!! TACGGTGTTGCAGAGAAAGG+AGG - Chr1:90509397-90509416 None:intergenic 50.0%
AACCTAGCCCAAAGGAGGGT+TGG + Chr1:90512768-90512787 MsG0180005337.01.T01:intron 55.0%
ACGTCAACCTAGCCCAAAGG+AGG + Chr1:90512763-90512782 MsG0180005337.01.T01:intron 55.0%
AGCCTGTAGCTCAAGATGCG+GGG + Chr1:90512089-90512108 MsG0180005337.01.T01:CDS 55.0%
CAGCCTGTAGCTCAAGATGC+GGG + Chr1:90512088-90512107 MsG0180005337.01.T01:CDS 55.0%
CAGGCTGAGCAAGACCTAAC+TGG - Chr1:90512075-90512094 None:intergenic 55.0%
CCACCACTTTGCTCACTCTC+TGG - Chr1:90513611-90513630 None:intergenic 55.0%
CCAGAGAGTGAGCAAAGTGG+TGG + Chr1:90513608-90513627 MsG0180005337.01.T01:three_prime_UTR 55.0%
CGTCAACCTAGCCCAAAGGA+GGG + Chr1:90512764-90512783 MsG0180005337.01.T01:intron 55.0%
CGTCTGCGCAATGACATAGC+TGG - Chr1:90509323-90509342 None:intergenic 55.0%
CTGTTCACGCTCATTGGCCA+GGG - Chr1:90511250-90511269 None:intergenic 55.0%
GACGGCCAACCTACCACAAT+AGG + Chr1:90512932-90512951 MsG0180005337.01.T01:intron 55.0%
GAGAGTGAGCAAAGTGGTGG+TGG + Chr1:90513611-90513630 MsG0180005337.01.T01:three_prime_UTR 55.0%
! GATTTGAGGCCCCCCAGAAA+AGG - Chr1:90513463-90513482 None:intergenic 55.0%
!! AGTGAGCAAAGTGGTGGTGG+TGG + Chr1:90513614-90513633 MsG0180005337.01.T01:three_prime_UTR 55.0%
!! GAAAGCAAGCTTTGGGGGGT+TGG + Chr1:90512854-90512873 MsG0180005337.01.T01:intron 55.0%
!! TGATGGCGGGAATAGTCGAG+TGG + Chr1:90511035-90511054 MsG0180005337.01.T01:CDS 55.0%
ACCCCCGCATCTTGAGCTAC+AGG - Chr1:90512094-90512113 None:intergenic 60.0%
AGCCTCCCCAAGTCCCCATA+TGG - Chr1:90513148-90513167 None:intergenic 60.0%
CCTGGCCAATGAGCGTGAAC+AGG + Chr1:90511248-90511267 MsG0180005337.01.T01:CDS 60.0%
CCTGTTCACGCTCATTGGCC+AGG - Chr1:90511251-90511270 None:intergenic 60.0%
GACCAACCCTCCTTTGGGCT+AGG - Chr1:90512773-90512792 None:intergenic 60.0%
GCCTGTAGCTCAAGATGCGG+GGG + Chr1:90512090-90512109 MsG0180005337.01.T01:CDS 60.0%
GCGCAGACGAACCTTGCTCA+AGG + Chr1:90509334-90509353 MsG0180005337.01.T01:CDS 60.0%
TGCCATATGGGGACTTGGGG+AGG + Chr1:90513143-90513162 MsG0180005337.01.T01:intron 60.0%
!! TCACTCTCTGGAACCGCCTC+AGG - Chr1:90513599-90513618 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr1 gene 90508975 90514078 90508975 ID=MsG0180005337.01;Name=MsG0180005337.01
Chr1 mRNA 90508975 90514078 90508975 ID=MsG0180005337.01.T01;Parent=MsG0180005337.01;Name=MsG0180005337.01.T01;_AED=0.47;_eAED=0.51;_QI=351|0.5|0.85|1|1|1|7|498|211
Chr1 exon 90508975 90509378 90508975 ID=MsG0180005337.01.T01:exon:48010;Parent=MsG0180005337.01.T01
Chr1 exon 90509889 90509988 90509889 ID=MsG0180005337.01.T01:exon:48011;Parent=MsG0180005337.01.T01
Chr1 exon 90510097 90510243 90510097 ID=MsG0180005337.01.T01:exon:48012;Parent=MsG0180005337.01.T01
Chr1 exon 90510976 90511056 90510976 ID=MsG0180005337.01.T01:exon:48013;Parent=MsG0180005337.01.T01
Chr1 exon 90511129 90511274 90511129 ID=MsG0180005337.01.T01:exon:48014;Parent=MsG0180005337.01.T01
Chr1 exon 90512039 90512146 90512039 ID=MsG0180005337.01.T01:exon:48015;Parent=MsG0180005337.01.T01
Chr1 exon 90513580 90514078 90513580 ID=MsG0180005337.01.T01:exon:48016;Parent=MsG0180005337.01.T01
Chr1 five_prime_UTR 90508975 90509325 90508975 ID=MsG0180005337.01.T01:five_prime_utr;Parent=MsG0180005337.01.T01
Chr1 CDS 90509326 90509378 90509326 ID=MsG0180005337.01.T01:cds;Parent=MsG0180005337.01.T01
Chr1 CDS 90509889 90509988 90509889 ID=MsG0180005337.01.T01:cds;Parent=MsG0180005337.01.T01
Chr1 CDS 90510097 90510243 90510097 ID=MsG0180005337.01.T01:cds;Parent=MsG0180005337.01.T01
Chr1 CDS 90510976 90511056 90510976 ID=MsG0180005337.01.T01:cds;Parent=MsG0180005337.01.T01
Chr1 CDS 90511129 90511274 90511129 ID=MsG0180005337.01.T01:cds;Parent=MsG0180005337.01.T01
Chr1 CDS 90512039 90512146 90512039 ID=MsG0180005337.01.T01:cds;Parent=MsG0180005337.01.T01
Chr1 CDS 90513580 90513580 90513580 ID=MsG0180005337.01.T01:cds;Parent=MsG0180005337.01.T01
Chr1 three_prime_UTR 90513581 90514078 90513581 ID=MsG0180005337.01.T01:three_prime_utr;Parent=MsG0180005337.01.T01
Gene Sequence

>MsG0180005337.01.T01

ATGTCATTGCGCAGACGAACCTTGCTCAAGGTCATTGTTCTCGGCGATAGCGGATATGTGCACAACAAGTTTAGTCAGCAGTATAAGGCAACAATTGGTGCTGATTTTGTCACTAAAGAACTTCAAATTGACGACAGACTCGTCACACTACAAATATGGGACACTGCTGGACAAGAGAGATTCCAAAGTCTTGGAGTTGCGTTTTATAGAGGGGCGGATTGCTGTGTTCTTGCGTATGACGTGAACGTCATGAGGTCGTTTGATTCACTTGACAACTGGCACGAGGAGTTTCTCAAACAGGCAAACCCTCCTGATACAAGGGCATTTCCATTTATATTGCTTGGAAACAAGATTGATATTGATGGCGGGAATAGTCGAGTGGTTTCTGAGAAGAAAGCAAAGGACTGGTGTGCTTCAAAAGGGAATATTCCCTACTTTGAGACATCTGCAAAAGAGGATTACAATGTTGATGCTGCATTCTTGTGTATTGCAAAGACTGCCCTGGCCAATGAGCGTGAACAGGACATATCTAGGATAAGTTCCAATACTATCTTAGAATTCCAGTTAGGTCTTGCTCAGCCTGTAGCTCAAGATGCGGGGGTTGCCCAAGCCTTATGTTACAATCAAACTACGTAA
Protein sequence

>MsG0180005337.01.T01

MSLRRRTLLKVIVLGDSGYVHNKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLAYDVNVMRSFDSLDNWHEEFLKQANPPDTRAFPFILLGNKIDIDGGNSRVVSEKKAKDWCASKGNIPYFETSAKEDYNVDAAFLCIAKTALANEREQDISRISSNTILEFQLGLAQPVAQDAGVAQALCYNQTT*