Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280007950.01.T01 | XP_013463202.1 | 93.75 | 288 | 17 | 1 | 1 | 287 | 1 | 288 | 0 | 518 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280007950.01.T01 | Q8L9T5 | 46.503 | 286 | 118 | 10 | 1 | 263 | 1 | 274 | 1.33E-62 | 202 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280007950.01.T01 | A0A072V5V7 | 93.750 | 288 | 17 | 1 | 1 | 287 | 1 | 288 | 0.0 | 518 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0280007950.01 | MsG0580029205.01 | 0.804050 | 2.601890e-49 | 1.328260e-46 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280007950.01.T01 | MTR_2g436100 | 93.750 | 288 | 17 | 1 | 1 | 287 | 1 | 288 | 0.0 | 518 |
MsG0280007950.01.T01 | MTR_4g120270 | 50.195 | 257 | 113 | 7 | 26 | 271 | 14 | 266 | 4.38e-66 | 207 |
MsG0280007950.01.T01 | MTR_8g023400 | 37.430 | 179 | 104 | 4 | 23 | 196 | 19 | 194 | 6.10e-32 | 120 |
MsG0280007950.01.T01 | MTR_7g117540 | 42.657 | 143 | 71 | 3 | 23 | 164 | 14 | 146 | 2.72e-30 | 115 |
MsG0280007950.01.T01 | MTR_2g090950 | 43.827 | 162 | 74 | 4 | 28 | 183 | 29 | 179 | 1.24e-28 | 110 |
MsG0280007950.01.T01 | MTR_3g464780 | 38.953 | 172 | 79 | 3 | 27 | 175 | 20 | 188 | 3.68e-27 | 106 |
MsG0280007950.01.T01 | MTR_3g008320 | 69.663 | 89 | 27 | 0 | 18 | 106 | 33 | 121 | 4.51e-24 | 94.7 |
MsG0280007950.01.T01 | MTR_6g087150 | 34.416 | 154 | 76 | 4 | 16 | 164 | 31 | 164 | 1.29e-23 | 99.4 |
MsG0280007950.01.T01 | MTR_8g089880 | 32.683 | 205 | 106 | 6 | 32 | 208 | 46 | 246 | 3.56e-23 | 96.3 |
MsG0280007950.01.T01 | MTR_1g082550 | 37.870 | 169 | 72 | 5 | 12 | 167 | 27 | 175 | 8.73e-23 | 97.1 |
MsG0280007950.01.T01 | MTR_5g071930 | 41.176 | 136 | 62 | 3 | 33 | 161 | 7 | 131 | 1.24e-22 | 93.2 |
MsG0280007950.01.T01 | MTR_3g071300 | 30.435 | 161 | 97 | 3 | 20 | 176 | 14 | 163 | 4.71e-22 | 90.9 |
MsG0280007950.01.T01 | MTR_3g100400 | 51.351 | 74 | 36 | 0 | 93 | 166 | 130 | 203 | 6.56e-22 | 94.7 |
MsG0280007950.01.T01 | MTR_3g110190 | 33.099 | 142 | 87 | 2 | 24 | 165 | 5 | 138 | 3.07e-21 | 92.0 |
MsG0280007950.01.T01 | MTR_5g064990 | 35.294 | 170 | 92 | 7 | 17 | 180 | 49 | 206 | 3.22e-21 | 92.8 |
MsG0280007950.01.T01 | MTR_2g090905 | 51.899 | 79 | 32 | 1 | 94 | 166 | 40 | 118 | 5.03e-21 | 86.7 |
MsG0280007950.01.T01 | MTR_5g066250 | 50.000 | 74 | 37 | 0 | 93 | 166 | 134 | 207 | 5.55e-21 | 92.4 |
MsG0280007950.01.T01 | MTR_7g113800 | 38.760 | 129 | 72 | 3 | 42 | 167 | 44 | 168 | 8.15e-21 | 91.3 |
MsG0280007950.01.T01 | MTR_3g086730 | 31.351 | 185 | 99 | 7 | 34 | 211 | 1 | 164 | 5.90e-20 | 86.7 |
MsG0280007950.01.T01 | MTR_3g086700 | 32.065 | 184 | 93 | 7 | 34 | 210 | 1 | 159 | 7.55e-20 | 85.5 |
MsG0280007950.01.T01 | MTR_3g091620 | 49.333 | 75 | 38 | 0 | 88 | 162 | 96 | 170 | 1.25e-19 | 87.8 |
MsG0280007950.01.T01 | MTR_1g074190 | 34.328 | 134 | 70 | 4 | 38 | 164 | 54 | 176 | 2.54e-19 | 87.0 |
MsG0280007950.01.T01 | MTR_4g106680 | 29.348 | 184 | 104 | 4 | 39 | 208 | 43 | 214 | 4.95e-19 | 85.5 |
MsG0280007950.01.T01 | MTR_3g094000 | 34.959 | 123 | 73 | 3 | 41 | 161 | 44 | 161 | 5.50e-19 | 82.8 |
MsG0280007950.01.T01 | MTR_7g108855 | 39.456 | 147 | 68 | 4 | 27 | 168 | 13 | 143 | 7.36e-19 | 82.8 |
MsG0280007950.01.T01 | MTR_2g041200 | 35.766 | 137 | 78 | 2 | 37 | 167 | 25 | 157 | 1.48e-18 | 81.6 |
MsG0280007950.01.T01 | MTR_4g063070 | 33.793 | 145 | 79 | 4 | 34 | 164 | 240 | 381 | 1.65e-18 | 85.1 |
MsG0280007950.01.T01 | MTR_8g073120 | 40.777 | 103 | 55 | 3 | 92 | 191 | 69 | 168 | 1.67e-18 | 82.0 |
MsG0280007950.01.T01 | MTR_3g099650 | 34.058 | 138 | 77 | 3 | 32 | 166 | 57 | 183 | 2.04e-18 | 84.7 |
MsG0280007950.01.T01 | MTR_5g026730 | 31.690 | 142 | 79 | 3 | 30 | 166 | 13 | 141 | 2.28e-18 | 80.9 |
MsG0280007950.01.T01 | MTR_7g073200 | 31.788 | 151 | 86 | 3 | 13 | 161 | 14 | 149 | 6.80e-18 | 79.7 |
MsG0280007950.01.T01 | MTR_5g030010 | 35.714 | 112 | 72 | 0 | 91 | 202 | 120 | 231 | 8.08e-18 | 82.8 |
MsG0280007950.01.T01 | MTR_4g093830 | 28.205 | 195 | 126 | 5 | 11 | 191 | 35 | 229 | 1.02e-17 | 82.4 |
MsG0280007950.01.T01 | MTR_1g043410 | 32.609 | 138 | 80 | 5 | 31 | 164 | 40 | 168 | 1.03e-17 | 82.0 |
MsG0280007950.01.T01 | MTR_5g082940 | 37.500 | 96 | 58 | 1 | 83 | 176 | 65 | 160 | 1.44e-17 | 78.6 |
MsG0280007950.01.T01 | MTR_1g492830 | 31.325 | 166 | 102 | 3 | 26 | 190 | 5 | 159 | 1.44e-17 | 80.1 |
MsG0280007950.01.T01 | MTR_5g064980 | 44.186 | 86 | 42 | 2 | 91 | 173 | 106 | 188 | 1.63e-17 | 82.0 |
MsG0280007950.01.T01 | MTR_4g129420 | 52.113 | 71 | 33 | 1 | 93 | 162 | 117 | 187 | 1.88e-17 | 82.4 |
MsG0280007950.01.T01 | MTR_5g064890 | 31.579 | 152 | 94 | 3 | 33 | 175 | 60 | 210 | 2.20e-17 | 81.6 |
MsG0280007950.01.T01 | MTR_5g076990 | 32.857 | 140 | 82 | 3 | 39 | 170 | 22 | 157 | 3.20e-17 | 80.5 |
MsG0280007950.01.T01 | MTR_8g066740 | 48.718 | 78 | 36 | 2 | 92 | 165 | 75 | 152 | 3.85e-17 | 80.1 |
MsG0280007950.01.T01 | MTR_1g070140 | 31.852 | 135 | 81 | 4 | 33 | 164 | 49 | 175 | 5.52e-17 | 80.1 |
MsG0280007950.01.T01 | MTR_2g009310 | 47.297 | 74 | 39 | 0 | 91 | 164 | 133 | 206 | 6.39e-17 | 80.5 |
MsG0280007950.01.T01 | MTR_6g055030 | 32.432 | 148 | 77 | 6 | 19 | 161 | 39 | 168 | 8.34e-17 | 79.3 |
MsG0280007950.01.T01 | MTR_7g116220 | 47.368 | 76 | 37 | 2 | 90 | 162 | 67 | 142 | 8.45e-17 | 77.0 |
MsG0280007950.01.T01 | MTR_4g056590 | 45.333 | 75 | 34 | 2 | 89 | 161 | 96 | 165 | 1.01e-16 | 77.0 |
MsG0280007950.01.T01 | MTR_8g066780 | 30.909 | 165 | 81 | 6 | 11 | 164 | 45 | 187 | 1.48e-16 | 79.0 |
MsG0280007950.01.T01 | MTR_5g024730 | 35.385 | 130 | 60 | 5 | 34 | 161 | 40 | 147 | 1.99e-16 | 76.6 |
MsG0280007950.01.T01 | MTR_2g096350 | 36.792 | 106 | 62 | 2 | 94 | 194 | 108 | 213 | 2.29e-16 | 76.6 |
MsG0280007950.01.T01 | MTR_5g034790 | 28.977 | 176 | 94 | 5 | 8 | 164 | 24 | 187 | 2.31e-16 | 78.6 |
MsG0280007950.01.T01 | MTR_7g116180 | 44.595 | 74 | 38 | 1 | 92 | 162 | 66 | 139 | 3.95e-16 | 75.1 |
MsG0280007950.01.T01 | MTR_5g026720 | 40.741 | 81 | 43 | 1 | 91 | 166 | 60 | 140 | 4.49e-16 | 74.3 |
MsG0280007950.01.T01 | MTR_6g007680 | 33.333 | 114 | 58 | 1 | 92 | 205 | 39 | 134 | 6.10e-16 | 73.9 |
MsG0280007950.01.T01 | MTR_1g070425 | 44.595 | 74 | 38 | 1 | 92 | 162 | 67 | 140 | 6.24e-16 | 74.3 |
MsG0280007950.01.T01 | MTR_6g007737 | 32.414 | 145 | 72 | 4 | 34 | 165 | 74 | 205 | 8.02e-16 | 77.0 |
MsG0280007950.01.T01 | MTR_8g063660 | 46.377 | 69 | 37 | 0 | 93 | 161 | 68 | 136 | 1.52e-15 | 75.9 |
MsG0280007950.01.T01 | MTR_8g093010 | 39.080 | 87 | 49 | 2 | 76 | 161 | 93 | 176 | 1.95e-15 | 73.9 |
MsG0280007950.01.T01 | MTR_8g009190 | 33.566 | 143 | 83 | 4 | 28 | 166 | 18 | 152 | 2.49e-15 | 75.1 |
MsG0280007950.01.T01 | MTR_2g035800 | 27.879 | 165 | 81 | 4 | 10 | 165 | 13 | 148 | 3.19e-15 | 72.0 |
MsG0280007950.01.T01 | MTR_2g044570 | 48.485 | 66 | 31 | 1 | 102 | 164 | 63 | 128 | 3.61e-15 | 74.7 |
MsG0280007950.01.T01 | MTR_8g092985 | 41.892 | 74 | 42 | 1 | 89 | 161 | 107 | 180 | 4.91e-15 | 72.8 |
MsG0280007950.01.T01 | MTR_4g030070 | 34.545 | 110 | 70 | 2 | 57 | 166 | 50 | 157 | 5.21e-15 | 72.8 |
MsG0280007950.01.T01 | MTR_3g078450 | 39.326 | 89 | 42 | 2 | 93 | 169 | 76 | 164 | 5.73e-15 | 72.8 |
MsG0280007950.01.T01 | MTR_3g078470 | 44.444 | 72 | 38 | 1 | 93 | 162 | 76 | 147 | 5.97e-15 | 72.8 |
MsG0280007950.01.T01 | MTR_8g092960 | 43.662 | 71 | 39 | 1 | 92 | 161 | 102 | 172 | 6.11e-15 | 72.8 |
MsG0280007950.01.T01 | MTR_2g055790 | 41.333 | 75 | 41 | 1 | 92 | 166 | 76 | 147 | 6.20e-15 | 72.0 |
MsG0280007950.01.T01 | MTR_8g092840 | 43.662 | 71 | 39 | 1 | 92 | 161 | 112 | 182 | 6.69e-15 | 72.8 |
MsG0280007950.01.T01 | MTR_3g078120 | 32.609 | 138 | 76 | 5 | 34 | 165 | 5 | 131 | 7.13e-15 | 70.9 |
MsG0280007950.01.T01 | MTR_7g096690 | 40.506 | 79 | 41 | 2 | 91 | 164 | 68 | 145 | 8.37e-15 | 73.9 |
MsG0280007950.01.T01 | MTR_3g095560 | 30.573 | 157 | 93 | 5 | 8 | 161 | 35 | 178 | 8.58e-15 | 72.8 |
MsG0280007950.01.T01 | MTR_3g116000 | 44.286 | 70 | 38 | 1 | 92 | 161 | 78 | 146 | 1.58e-14 | 70.9 |
MsG0280007950.01.T01 | MTR_6g007670 | 36.264 | 91 | 57 | 1 | 92 | 182 | 7 | 96 | 1.75e-14 | 72.0 |
MsG0280007950.01.T01 | MTR_6g007670 | 39.189 | 74 | 44 | 1 | 92 | 164 | 144 | 217 | 8.80e-12 | 64.3 |
MsG0280007950.01.T01 | MTR_8g092930 | 42.254 | 71 | 40 | 1 | 92 | 161 | 111 | 181 | 1.81e-14 | 71.2 |
MsG0280007950.01.T01 | MTR_8g071815 | 45.833 | 72 | 34 | 1 | 119 | 190 | 90 | 156 | 2.44e-14 | 70.1 |
MsG0280007950.01.T01 | MTR_7g059360 | 43.023 | 86 | 38 | 2 | 107 | 191 | 145 | 220 | 3.33e-14 | 70.9 |
MsG0280007950.01.T01 | MTR_1g100737 | 39.474 | 76 | 41 | 1 | 92 | 162 | 91 | 166 | 3.92e-14 | 69.7 |
MsG0280007950.01.T01 | MTR_5g022920 | 42.466 | 73 | 40 | 1 | 91 | 161 | 159 | 231 | 4.38e-14 | 70.5 |
MsG0280007950.01.T01 | MTR_7g116200 | 43.662 | 71 | 39 | 1 | 92 | 162 | 67 | 136 | 6.89e-14 | 68.6 |
MsG0280007950.01.T01 | MTR_8g092970 | 52.941 | 51 | 24 | 0 | 111 | 161 | 123 | 173 | 1.52e-13 | 68.6 |
MsG0280007950.01.T01 | MTR_8g019710 | 43.077 | 65 | 35 | 1 | 105 | 167 | 38 | 102 | 1.87e-13 | 66.6 |
MsG0280007950.01.T01 | MTR_8g072020 | 38.889 | 90 | 50 | 4 | 74 | 161 | 362 | 448 | 1.90e-13 | 70.5 |
MsG0280007950.01.T01 | MTR_8g072020 | 38.889 | 90 | 50 | 4 | 74 | 161 | 401 | 487 | 1.97e-13 | 70.5 |
MsG0280007950.01.T01 | MTR_5g009210 | 30.645 | 124 | 84 | 2 | 40 | 161 | 234 | 357 | 2.08e-13 | 70.1 |
MsG0280007950.01.T01 | MTR_8g092990 | 52.941 | 51 | 24 | 0 | 111 | 161 | 133 | 183 | 2.24e-13 | 68.6 |
MsG0280007950.01.T01 | MTR_3g012550 | 31.250 | 128 | 82 | 4 | 37 | 161 | 26 | 150 | 3.50e-13 | 67.0 |
MsG0280007950.01.T01 | MTR_8g099495 | 32.500 | 120 | 67 | 4 | 44 | 161 | 282 | 389 | 5.44e-13 | 68.9 |
MsG0280007950.01.T01 | MTR_5g092750 | 40.789 | 76 | 43 | 1 | 91 | 164 | 155 | 230 | 5.67e-13 | 67.4 |
MsG0280007950.01.T01 | MTR_7g116210 | 42.254 | 71 | 40 | 1 | 92 | 162 | 9 | 78 | 6.28e-13 | 64.7 |
MsG0280007950.01.T01 | MTR_7g076250 | 32.432 | 74 | 49 | 1 | 93 | 165 | 63 | 136 | 7.58e-13 | 66.2 |
MsG0280007950.01.T01 | MTR_4g022410 | 33.846 | 130 | 68 | 3 | 41 | 164 | 41 | 158 | 8.75e-13 | 65.9 |
MsG0280007950.01.T01 | MTR_3g091200 | 40.476 | 84 | 48 | 2 | 89 | 170 | 299 | 382 | 8.80e-13 | 68.2 |
MsG0280007950.01.T01 | MTR_5g009190 | 31.200 | 125 | 71 | 3 | 39 | 161 | 225 | 336 | 1.03e-12 | 67.8 |
MsG0280007950.01.T01 | MTR_5g092790 | 39.474 | 76 | 44 | 1 | 91 | 164 | 155 | 230 | 1.07e-12 | 66.6 |
MsG0280007950.01.T01 | MTR_3g078520 | 42.105 | 76 | 43 | 1 | 88 | 162 | 71 | 146 | 1.84e-12 | 64.7 |
MsG0280007950.01.T01 | MTR_4g116460 | 43.056 | 72 | 36 | 3 | 97 | 164 | 459 | 529 | 2.41e-12 | 67.4 |
MsG0280007950.01.T01 | MTR_4g116460 | 43.056 | 72 | 36 | 3 | 97 | 164 | 416 | 486 | 2.48e-12 | 67.4 |
MsG0280007950.01.T01 | MTR_8g074900 | 55.319 | 47 | 21 | 0 | 115 | 161 | 176 | 222 | 3.48e-12 | 65.1 |
MsG0280007950.01.T01 | MTR_1g056350 | 38.356 | 73 | 42 | 1 | 93 | 162 | 74 | 146 | 3.96e-12 | 63.5 |
MsG0280007950.01.T01 | MTR_8g099515 | 37.113 | 97 | 43 | 2 | 93 | 187 | 309 | 389 | 4.15e-12 | 66.2 |
MsG0280007950.01.T01 | MTR_4g108830 | 50.000 | 46 | 23 | 0 | 119 | 164 | 174 | 219 | 5.92e-12 | 64.3 |
MsG0280007950.01.T01 | MTR_5g009200 | 36.145 | 83 | 51 | 2 | 81 | 161 | 310 | 392 | 6.05e-12 | 65.9 |
MsG0280007950.01.T01 | MTR_4g108830 | 50.000 | 46 | 23 | 0 | 119 | 164 | 146 | 191 | 6.20e-12 | 63.5 |
MsG0280007950.01.T01 | MTR_3g081030 | 42.857 | 77 | 41 | 2 | 92 | 166 | 91 | 166 | 7.32e-12 | 63.9 |
MsG0280007950.01.T01 | MTR_8g032690 | 31.731 | 104 | 66 | 2 | 106 | 205 | 6 | 108 | 7.37e-12 | 61.2 |
MsG0280007950.01.T01 | MTR_1g026070 | 46.000 | 50 | 27 | 0 | 117 | 166 | 69 | 118 | 8.94e-12 | 62.0 |
MsG0280007950.01.T01 | MTR_7g079280 | 33.696 | 92 | 54 | 2 | 72 | 161 | 64 | 150 | 1.97e-11 | 62.0 |
MsG0280007950.01.T01 | MTR_2g079320 | 52.273 | 44 | 21 | 0 | 118 | 161 | 158 | 201 | 2.21e-11 | 62.4 |
MsG0280007950.01.T01 | MTR_3g114500 | 46.939 | 49 | 26 | 0 | 118 | 166 | 70 | 118 | 2.38e-11 | 60.5 |
MsG0280007950.01.T01 | MTR_8g027745 | 39.506 | 81 | 47 | 2 | 88 | 166 | 281 | 361 | 3.01e-11 | 63.5 |
MsG0280007950.01.T01 | MTR_6g055030 | 37.647 | 85 | 40 | 2 | 90 | 161 | 53 | 137 | 3.55e-11 | 62.8 |
MsG0280007950.01.T01 | MTR_7g117350 | 26.190 | 168 | 104 | 5 | 1 | 161 | 210 | 364 | 3.70e-11 | 63.5 |
MsG0280007950.01.T01 | MTR_1g090480 | 30.323 | 155 | 90 | 6 | 16 | 166 | 9 | 149 | 5.67e-11 | 60.5 |
MsG0280007950.01.T01 | MTR_4g077570 | 44.068 | 59 | 29 | 2 | 114 | 169 | 6 | 63 | 6.89e-11 | 57.8 |
MsG0280007950.01.T01 | MTR_8g098770 | 31.613 | 155 | 89 | 7 | 49 | 196 | 15 | 159 | 6.94e-11 | 60.1 |
MsG0280007950.01.T01 | MTR_4g094725 | 55.814 | 43 | 19 | 0 | 119 | 161 | 106 | 148 | 7.21e-11 | 59.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280007950.01.T01 | AT3G16720 | 46.503 | 286 | 118 | 10 | 1 | 263 | 1 | 274 | 1.35e-63 | 202 |
MsG0280007950.01.T01 | AT3G62690 | 47.742 | 155 | 76 | 3 | 27 | 178 | 22 | 174 | 4.61e-39 | 137 |
MsG0280007950.01.T01 | AT4G15975 | 40.000 | 200 | 89 | 9 | 51 | 242 | 18 | 194 | 5.31e-36 | 129 |
MsG0280007950.01.T01 | AT2G47560 | 41.277 | 235 | 105 | 8 | 26 | 255 | 21 | 227 | 6.26e-36 | 129 |
MsG0280007950.01.T01 | AT2G42360 | 34.146 | 246 | 117 | 8 | 23 | 265 | 21 | 224 | 3.15e-31 | 117 |
MsG0280007950.01.T01 | AT1G72310 | 34.896 | 192 | 102 | 5 | 23 | 195 | 14 | 201 | 6.43e-28 | 110 |
MsG0280007950.01.T01 | AT5G05810 | 55.405 | 74 | 33 | 0 | 93 | 166 | 120 | 193 | 4.76e-24 | 100 |
MsG0280007950.01.T01 | AT1G53820 | 35.802 | 162 | 80 | 5 | 25 | 169 | 16 | 170 | 9.04e-24 | 98.6 |
MsG0280007950.01.T01 | AT4G28890 | 38.037 | 163 | 93 | 4 | 14 | 176 | 25 | 179 | 1.26e-22 | 97.1 |
MsG0280007950.01.T01 | AT1G04360 | 30.625 | 160 | 93 | 3 | 12 | 164 | 31 | 179 | 1.30e-22 | 96.7 |
MsG0280007950.01.T01 | AT2G42350 | 37.241 | 145 | 77 | 3 | 26 | 170 | 21 | 151 | 2.36e-21 | 90.1 |
MsG0280007950.01.T01 | AT5G58580 | 50.562 | 89 | 40 | 2 | 80 | 164 | 95 | 183 | 3.19e-21 | 91.7 |
MsG0280007950.01.T01 | AT5G27420 | 47.917 | 96 | 44 | 2 | 83 | 175 | 88 | 180 | 4.32e-21 | 92.0 |
MsG0280007950.01.T01 | AT2G35000 | 34.756 | 164 | 79 | 5 | 34 | 190 | 51 | 193 | 5.72e-21 | 92.0 |
MsG0280007950.01.T01 | AT2G35420 | 31.765 | 170 | 99 | 4 | 39 | 205 | 30 | 185 | 5.93e-21 | 90.1 |
MsG0280007950.01.T01 | AT4G33565 | 54.054 | 74 | 34 | 0 | 91 | 164 | 189 | 262 | 1.00e-20 | 91.3 |
MsG0280007950.01.T01 | AT3G05200 | 42.105 | 114 | 51 | 4 | 83 | 181 | 89 | 202 | 1.26e-20 | 91.3 |
MsG0280007950.01.T01 | AT2G20030 | 35.948 | 153 | 74 | 4 | 93 | 245 | 98 | 226 | 1.56e-20 | 90.9 |
MsG0280007950.01.T01 | AT1G23980 | 33.553 | 152 | 75 | 2 | 26 | 161 | 45 | 186 | 1.67e-20 | 90.5 |
MsG0280007950.01.T01 | AT3G18773 | 34.810 | 158 | 85 | 4 | 9 | 161 | 28 | 172 | 2.83e-20 | 87.4 |
MsG0280007950.01.T01 | AT1G72200 | 35.570 | 149 | 75 | 4 | 39 | 177 | 65 | 202 | 8.97e-20 | 89.0 |
MsG0280007950.01.T01 | AT4G10160 | 34.109 | 129 | 82 | 2 | 38 | 166 | 19 | 144 | 1.02e-19 | 85.9 |
MsG0280007950.01.T01 | AT3G18930 | 51.220 | 82 | 30 | 1 | 93 | 164 | 120 | 201 | 1.92e-19 | 87.8 |
MsG0280007950.01.T01 | AT3G18930 | 51.220 | 82 | 30 | 1 | 93 | 164 | 120 | 201 | 1.92e-19 | 87.8 |
MsG0280007950.01.T01 | AT3G18930 | 51.220 | 82 | 30 | 1 | 93 | 164 | 120 | 201 | 1.92e-19 | 87.8 |
MsG0280007950.01.T01 | AT1G76410 | 34.667 | 150 | 77 | 5 | 13 | 161 | 17 | 146 | 4.16e-19 | 83.2 |
MsG0280007950.01.T01 | AT5G17600 | 38.211 | 123 | 65 | 3 | 87 | 201 | 110 | 229 | 4.27e-19 | 86.7 |
MsG0280007950.01.T01 | AT4G40070 | 45.122 | 82 | 42 | 1 | 93 | 171 | 95 | 176 | 5.89e-19 | 85.5 |
MsG0280007950.01.T01 | AT2G18650 | 38.333 | 120 | 56 | 3 | 51 | 162 | 60 | 169 | 6.77e-19 | 86.3 |
MsG0280007950.01.T01 | AT4G17905 | 36.296 | 135 | 72 | 6 | 80 | 204 | 142 | 272 | 1.15e-18 | 85.1 |
MsG0280007950.01.T01 | AT2G34990 | 34.328 | 134 | 77 | 3 | 33 | 162 | 13 | 139 | 1.37e-18 | 84.3 |
MsG0280007950.01.T01 | AT2G27940 | 47.887 | 71 | 36 | 1 | 92 | 162 | 114 | 183 | 1.39e-18 | 83.2 |
MsG0280007950.01.T01 | AT2G34990 | 34.328 | 134 | 77 | 3 | 33 | 162 | 35 | 161 | 1.49e-18 | 84.3 |
MsG0280007950.01.T01 | AT4G17905 | 36.296 | 135 | 72 | 6 | 80 | 204 | 116 | 246 | 1.57e-18 | 84.3 |
MsG0280007950.01.T01 | AT3G10910 | 32.418 | 182 | 90 | 6 | 7 | 174 | 7 | 169 | 1.72e-18 | 81.6 |
MsG0280007950.01.T01 | AT5G43420 | 34.416 | 154 | 65 | 7 | 33 | 164 | 44 | 183 | 1.73e-18 | 84.7 |
MsG0280007950.01.T01 | AT1G20823 | 37.984 | 129 | 67 | 4 | 34 | 161 | 37 | 153 | 3.19e-18 | 81.3 |
MsG0280007950.01.T01 | AT4G30400 | 52.857 | 70 | 32 | 1 | 93 | 161 | 107 | 176 | 3.75e-18 | 84.3 |
MsG0280007950.01.T01 | AT4G09120 | 31.737 | 167 | 78 | 6 | 28 | 183 | 45 | 186 | 5.84e-18 | 83.2 |
MsG0280007950.01.T01 | AT3G60220 | 47.222 | 72 | 35 | 1 | 96 | 164 | 91 | 162 | 1.47e-17 | 81.6 |
MsG0280007950.01.T01 | AT4G10150 | 26.147 | 218 | 129 | 6 | 5 | 202 | 7 | 212 | 2.35e-17 | 79.7 |
MsG0280007950.01.T01 | AT1G22500 | 33.333 | 156 | 82 | 4 | 20 | 167 | 25 | 166 | 2.80e-17 | 81.6 |
MsG0280007950.01.T01 | AT1G32361 | 47.826 | 69 | 34 | 1 | 93 | 161 | 130 | 196 | 2.84e-17 | 80.9 |
MsG0280007950.01.T01 | AT4G09110 | 30.435 | 161 | 88 | 5 | 28 | 183 | 45 | 186 | 2.99e-17 | 80.5 |
MsG0280007950.01.T01 | AT3G14320 | 33.333 | 141 | 85 | 3 | 93 | 225 | 63 | 202 | 3.65e-17 | 78.6 |
MsG0280007950.01.T01 | AT5G10380 | 40.625 | 96 | 56 | 1 | 91 | 185 | 107 | 202 | 3.97e-17 | 80.1 |
MsG0280007950.01.T01 | AT4G09100 | 46.154 | 78 | 39 | 1 | 92 | 166 | 55 | 132 | 5.70e-17 | 76.3 |
MsG0280007950.01.T01 | AT1G49220 | 35.507 | 138 | 72 | 6 | 28 | 161 | 53 | 177 | 7.51e-17 | 78.6 |
MsG0280007950.01.T01 | AT3G03550 | 47.059 | 68 | 36 | 0 | 94 | 161 | 134 | 201 | 8.94e-17 | 79.7 |
MsG0280007950.01.T01 | AT5G01880 | 42.708 | 96 | 54 | 1 | 67 | 161 | 52 | 147 | 9.20e-17 | 76.3 |
MsG0280007950.01.T01 | AT1G35330 | 45.000 | 80 | 41 | 1 | 90 | 166 | 97 | 176 | 1.13e-16 | 79.3 |
MsG0280007950.01.T01 | AT5G57750 | 34.307 | 137 | 81 | 3 | 34 | 161 | 28 | 164 | 1.24e-16 | 77.0 |
MsG0280007950.01.T01 | AT3G48030 | 37.607 | 117 | 68 | 2 | 93 | 208 | 102 | 214 | 1.35e-16 | 78.2 |
MsG0280007950.01.T01 | AT5G46650 | 30.942 | 223 | 116 | 12 | 8 | 214 | 2 | 202 | 2.09e-16 | 77.8 |
MsG0280007950.01.T01 | AT1G49200 | 32.609 | 138 | 76 | 5 | 28 | 161 | 54 | 178 | 2.17e-16 | 77.0 |
MsG0280007950.01.T01 | AT3G48030 | 37.607 | 117 | 68 | 2 | 93 | 208 | 180 | 292 | 2.32e-16 | 78.6 |
MsG0280007950.01.T01 | AT1G72220 | 29.167 | 144 | 86 | 1 | 37 | 164 | 79 | 222 | 2.56e-16 | 79.0 |
MsG0280007950.01.T01 | AT5G40250 | 30.457 | 197 | 94 | 8 | 26 | 192 | 38 | 221 | 3.55e-16 | 78.2 |
MsG0280007950.01.T01 | AT4G17920 | 30.055 | 183 | 108 | 7 | 33 | 204 | 25 | 198 | 7.08e-16 | 76.6 |
MsG0280007950.01.T01 | AT5G05280 | 37.302 | 126 | 63 | 5 | 41 | 161 | 41 | 155 | 7.59e-16 | 74.3 |
MsG0280007950.01.T01 | AT1G33480 | 30.864 | 162 | 101 | 5 | 37 | 194 | 25 | 179 | 8.69e-16 | 75.9 |
MsG0280007950.01.T01 | AT2G34000 | 34.028 | 144 | 84 | 4 | 37 | 175 | 10 | 147 | 9.04e-16 | 73.6 |
MsG0280007950.01.T01 | AT3G19140 | 39.326 | 89 | 53 | 1 | 82 | 170 | 43 | 130 | 1.35e-15 | 72.8 |
MsG0280007950.01.T01 | AT4G09130 | 47.368 | 76 | 37 | 1 | 90 | 162 | 88 | 163 | 2.33e-15 | 75.9 |
MsG0280007950.01.T01 | AT2G46495 | 32.468 | 154 | 87 | 7 | 22 | 169 | 228 | 370 | 4.81e-15 | 75.1 |
MsG0280007950.01.T01 | AT1G49210 | 32.609 | 138 | 76 | 5 | 28 | 161 | 53 | 177 | 4.91e-15 | 73.2 |
MsG0280007950.01.T01 | AT5G07040 | 35.000 | 140 | 76 | 7 | 25 | 161 | 9 | 136 | 5.94e-15 | 71.2 |
MsG0280007950.01.T01 | AT3G20395 | 41.429 | 70 | 39 | 2 | 92 | 161 | 146 | 213 | 6.87e-15 | 72.8 |
MsG0280007950.01.T01 | AT2G17730 | 38.636 | 88 | 51 | 1 | 80 | 164 | 154 | 241 | 8.10e-15 | 72.8 |
MsG0280007950.01.T01 | AT5G53110 | 43.421 | 76 | 41 | 2 | 88 | 161 | 297 | 372 | 9.25e-15 | 74.3 |
MsG0280007950.01.T01 | AT2G17450 | 41.667 | 84 | 42 | 1 | 92 | 168 | 68 | 151 | 1.37e-14 | 70.9 |
MsG0280007950.01.T01 | AT1G74410 | 36.486 | 74 | 47 | 0 | 92 | 165 | 149 | 222 | 2.45e-14 | 71.2 |
MsG0280007950.01.T01 | AT5G47610 | 34.091 | 132 | 64 | 5 | 37 | 164 | 40 | 152 | 2.53e-14 | 69.7 |
MsG0280007950.01.T01 | AT2G35910 | 42.857 | 70 | 40 | 0 | 93 | 162 | 121 | 190 | 9.18e-14 | 69.3 |
MsG0280007950.01.T01 | AT4G35840 | 40.541 | 74 | 41 | 1 | 91 | 161 | 160 | 233 | 1.44e-13 | 69.3 |
MsG0280007950.01.T01 | AT5G42200 | 28.571 | 140 | 85 | 4 | 30 | 166 | 24 | 151 | 1.61e-13 | 67.4 |
MsG0280007950.01.T01 | AT1G28040 | 35.398 | 113 | 64 | 4 | 51 | 161 | 190 | 295 | 1.73e-13 | 69.7 |
MsG0280007950.01.T01 | AT2G46494 | 33.846 | 130 | 69 | 4 | 44 | 161 | 234 | 358 | 1.81e-13 | 70.1 |
MsG0280007950.01.T01 | AT2G46495 | 40.964 | 83 | 46 | 2 | 90 | 169 | 260 | 342 | 1.89e-13 | 70.1 |
MsG0280007950.01.T01 | AT1G53010 | 42.857 | 77 | 37 | 2 | 92 | 161 | 96 | 172 | 2.34e-13 | 67.4 |
MsG0280007950.01.T01 | AT2G25410 | 38.298 | 94 | 52 | 3 | 79 | 169 | 287 | 377 | 4.45e-13 | 69.3 |
MsG0280007950.01.T01 | AT5G66070 | 38.824 | 85 | 44 | 2 | 80 | 161 | 139 | 218 | 4.63e-13 | 67.4 |
MsG0280007950.01.T01 | AT5G66070 | 38.824 | 85 | 44 | 2 | 80 | 161 | 139 | 218 | 4.63e-13 | 67.4 |
MsG0280007950.01.T01 | AT5G66070 | 38.824 | 85 | 44 | 2 | 80 | 161 | 163 | 242 | 5.22e-13 | 67.8 |
MsG0280007950.01.T01 | AT2G46493 | 41.667 | 72 | 40 | 1 | 92 | 161 | 109 | 180 | 8.05e-13 | 66.2 |
MsG0280007950.01.T01 | AT3G60966 | 47.458 | 59 | 31 | 0 | 109 | 167 | 52 | 110 | 8.85e-13 | 64.7 |
MsG0280007950.01.T01 | AT4G24015 | 56.522 | 46 | 20 | 0 | 119 | 164 | 105 | 150 | 2.14e-12 | 64.7 |
MsG0280007950.01.T01 | AT3G61550 | 30.973 | 113 | 60 | 3 | 74 | 171 | 80 | 189 | 2.62e-12 | 65.1 |
MsG0280007950.01.T01 | AT1G49230 | 40.506 | 79 | 46 | 1 | 84 | 161 | 95 | 173 | 3.49e-12 | 65.1 |
MsG0280007950.01.T01 | AT3G61460 | 50.794 | 63 | 29 | 2 | 106 | 166 | 80 | 142 | 3.57e-12 | 63.9 |
MsG0280007950.01.T01 | AT3G11110 | 28.105 | 153 | 83 | 5 | 20 | 164 | 19 | 152 | 3.63e-12 | 63.5 |
MsG0280007950.01.T01 | AT4G30370 | 37.500 | 72 | 45 | 0 | 93 | 164 | 89 | 160 | 4.45e-12 | 63.9 |
MsG0280007950.01.T01 | AT4G35480 | 45.455 | 55 | 30 | 0 | 114 | 168 | 108 | 162 | 4.55e-12 | 64.3 |
MsG0280007950.01.T01 | AT5G06490 | 34.579 | 107 | 59 | 3 | 78 | 174 | 82 | 187 | 4.55e-12 | 64.3 |
MsG0280007950.01.T01 | AT5G66160 | 35.227 | 88 | 55 | 2 | 89 | 175 | 202 | 288 | 4.84e-12 | 65.5 |
MsG0280007950.01.T01 | AT4G17245 | 47.887 | 71 | 35 | 2 | 94 | 162 | 76 | 146 | 5.22e-12 | 63.5 |
MsG0280007950.01.T01 | AT5G66160 | 26.282 | 156 | 90 | 4 | 7 | 161 | 143 | 274 | 8.79e-12 | 65.1 |
MsG0280007950.01.T01 | AT5G36001 | 46.032 | 63 | 33 | 1 | 109 | 170 | 253 | 315 | 1.14e-11 | 64.7 |
MsG0280007950.01.T01 | AT2G18670 | 34.568 | 81 | 52 | 1 | 93 | 172 | 83 | 163 | 1.74e-11 | 62.4 |
MsG0280007950.01.T01 | AT2G46160 | 35.000 | 80 | 44 | 1 | 90 | 161 | 101 | 180 | 2.03e-11 | 62.8 |
MsG0280007950.01.T01 | AT2G46160 | 35.000 | 80 | 44 | 1 | 90 | 161 | 101 | 180 | 2.03e-11 | 62.8 |
MsG0280007950.01.T01 | AT3G19910 | 40.506 | 79 | 45 | 2 | 87 | 164 | 255 | 332 | 2.21e-11 | 63.9 |
MsG0280007950.01.T01 | AT2G17730 | 39.241 | 79 | 45 | 1 | 80 | 155 | 154 | 232 | 3.50e-11 | 62.8 |
Find 84 sgRNAs with CRISPR-Local
Find 99 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCGGAACTTGAACCCGTTTC+CGG | 0.243677 | 2:+23570583 | None:intergenic |
CCGTTGAGATTGTAACCTTT+TGG | 0.249649 | 2:+23571051 | None:intergenic |
AGAGAATTCTTAGTATGAAT+TGG | 0.284188 | 2:-23570372 | MsG0280007950.01.T01:CDS |
CGAAAACCTTCGTTTCTTGT+AGG | 0.286101 | 2:+23570454 | None:intergenic |
GTGGTGACGGCGGCGTTTGT+TGG | 0.291543 | 2:+23570877 | None:intergenic |
AAATGTTTACGAACCGGAAA+CGG | 0.331044 | 2:-23570596 | MsG0280007950.01.T01:CDS |
GGTACCAACGAGCGTAAATA+TGG | 0.336153 | 2:+23570968 | None:intergenic |
TGGAAACTATGTTTACATTT+CGG | 0.336174 | 2:+23570715 | None:intergenic |
TCGAATTACAATCAAAATAA+AGG | 0.340381 | 2:-23570286 | MsG0280007950.01.T01:CDS |
CCGGAAACGGGTTCAAGTTC+CGG | 0.342535 | 2:-23570583 | MsG0280007950.01.T01:CDS |
ACATATCAATACACTCAGTA+TGG | 0.349540 | 2:+23570695 | None:intergenic |
ATCTCTGGGGAATTTGGGTA+TGG | 0.352008 | 2:+23571098 | None:intergenic |
GTTCGAGTTCGGTTGGCTTA+AGG | 0.358938 | 2:-23570513 | MsG0280007950.01.T01:CDS |
TCGTGCGACGGTGGTGGTGG+TGG | 0.371476 | 2:-23570331 | MsG0280007950.01.T01:CDS |
AGGAGAAAGCCGTCATTTGC+GGG | 0.376034 | 2:-23570493 | MsG0280007950.01.T01:CDS |
GGAATGTGCTGTTTGTTTAT+CGG | 0.378322 | 2:-23570770 | MsG0280007950.01.T01:CDS |
AATGTTTACGAACCGGAAAC+GGG | 0.392861 | 2:-23570595 | MsG0280007950.01.T01:CDS |
GATGAAGAAGAGAAGGATAA+TGG | 0.397855 | 2:+23571011 | None:intergenic |
TAAAGAGGTTGGTTCGAGTT+CGG | 0.402472 | 2:-23570524 | MsG0280007950.01.T01:CDS |
ACTCGAACCAACCTCTTTAC+CGG | 0.407531 | 2:+23570528 | None:intergenic |
ATTCATATCTTCGGTCGAAC+CGG | 0.420761 | 2:+23570564 | None:intergenic |
TGTTATAAATGTTTACGAAC+CGG | 0.426231 | 2:-23570602 | MsG0280007950.01.T01:CDS |
TGGTGACGGCGGCGTTTGTT+GGG | 0.426240 | 2:+23570878 | None:intergenic |
GGAGTTTGAACCCGGTGAAA+CGG | 0.431723 | 2:-23570749 | MsG0280007950.01.T01:CDS |
TTGATTGTAATTCGAAGCTT+CGG | 0.436173 | 2:+23570294 | None:intergenic |
GGTTTCTCCGGCGACGAGAT+TGG | 0.443793 | 2:+23570941 | None:intergenic |
GAGTTTGAACCCGGTGAAAC+GGG | 0.451664 | 2:-23570748 | MsG0280007950.01.T01:CDS |
ATGACACGTGTCCTCTTTGT+CGG | 0.452785 | 2:-23570660 | MsG0280007950.01.T01:CDS |
CGACTCAGTCATCGTCGTTC+CGG | 0.453016 | 2:-23570423 | MsG0280007950.01.T01:CDS |
TAAACATTTATAACAACATC+GGG | 0.454846 | 2:+23570610 | None:intergenic |
TGAACCCGGTGAAACGGGTC+GGG | 0.461784 | 2:-23570743 | MsG0280007950.01.T01:CDS |
AAGGAGAAAGCCGTCATTTG+CGG | 0.462103 | 2:-23570494 | MsG0280007950.01.T01:CDS |
GGCGGCGTTTGTTGGGTCAT+CGG | 0.470672 | 2:+23570885 | None:intergenic |
TGGTGGTGGTGGGTGTAGCT+CGG | 0.480612 | 2:-23570320 | MsG0280007950.01.T01:CDS |
GATAAACAAACAGCACATTC+CGG | 0.481033 | 2:+23570772 | None:intergenic |
TCCTCGTGTAACGGTGGTGA+CGG | 0.488429 | 2:+23570864 | None:intergenic |
AACCAACCTCTTTACCGGCT+CGG | 0.493277 | 2:+23570533 | None:intergenic |
GTTCTCATGATTCATATCTT+CGG | 0.493287 | 2:+23570555 | None:intergenic |
GTCTCCATATTTACGCTCGT+TGG | 0.498327 | 2:-23570972 | MsG0280007950.01.T01:CDS |
TAAAACCCGACCCGTTTCAC+CGG | 0.498785 | 2:+23570738 | None:intergenic |
ATTCTTAGTATGAATTGGAA+AGG | 0.505211 | 2:-23570367 | MsG0280007950.01.T01:CDS |
GAGGTTGGTTCGAGTTCGGT+TGG | 0.508439 | 2:-23570520 | MsG0280007950.01.T01:CDS |
TTCTTAGTATGAATTGGAAA+GGG | 0.510438 | 2:-23570366 | MsG0280007950.01.T01:CDS |
ATACTGAGTGTATTGATATG+TGG | 0.514838 | 2:-23570693 | MsG0280007950.01.T01:CDS |
CGTGCGACGGTGGTGGTGGT+GGG | 0.519737 | 2:-23570330 | MsG0280007950.01.T01:CDS |
TGTTTATCGGAGTTTGAACC+CGG | 0.519869 | 2:-23570757 | MsG0280007950.01.T01:CDS |
GACGGCGGATACGGTTTCTC+CGG | 0.522297 | 2:+23570929 | None:intergenic |
ACATTCTACTCATCGGCGAC+CGG | 0.524422 | 2:+23570404 | None:intergenic |
ACCTTCTCCAATCTCGTCGC+CGG | 0.525239 | 2:-23570948 | MsG0280007950.01.T01:CDS |
TCTCTGGGGAATTTGGGTAT+GGG | 0.527541 | 2:+23571099 | None:intergenic |
TCTCCGTCGTGCGACGGTGG+TGG | 0.532122 | 2:-23570337 | MsG0280007950.01.T01:CDS |
CCGTCGTGCGACGGTGGTGG+TGG | 0.538153 | 2:-23570334 | MsG0280007950.01.T01:CDS |
CAACGGAAGAGAAGCGATGA+CGG | 0.541755 | 2:+23570831 | None:intergenic |
AATGTTTCTCCGTCGTGCGA+CGG | 0.548559 | 2:-23570343 | MsG0280007950.01.T01:CDS |
TTGGGTCAAAATCGTTGGGA+GGG | 0.550055 | 2:+23571070 | None:intergenic |
GGCGTCGAGTCCTCGTGTAA+CGG | 0.552298 | 2:+23570855 | None:intergenic |
GCTGAGTACGACGGCGGATA+CGG | 0.553426 | 2:+23570920 | None:intergenic |
GTTTCTCCGTCGTGCGACGG+TGG | 0.561280 | 2:-23570340 | MsG0280007950.01.T01:CDS |
AAAACCCGACCCGTTTCACC+GGG | 0.561423 | 2:+23570739 | None:intergenic |
AAACGATGATGAAGAAGAGA+AGG | 0.562317 | 2:+23571004 | None:intergenic |
CATTTATAACAACATCGGGT+CGG | 0.570153 | 2:+23570614 | None:intergenic |
GTAAACATTTATAACAACAT+CGG | 0.575509 | 2:+23570609 | None:intergenic |
TCCGGCGACGAGATTGGAGA+AGG | 0.576614 | 2:+23570947 | None:intergenic |
ACTGTCACTCCCGCAAATGA+CGG | 0.578676 | 2:+23570484 | None:intergenic |
TGAGAACCGAGCCGGTAAAG+AGG | 0.581945 | 2:-23570539 | MsG0280007950.01.T01:CDS |
TCAACGGGCGTCCGACAAAG+AGG | 0.599142 | 2:+23570649 | None:intergenic |
AACCGAGCCGGTAAAGAGGT+TGG | 0.600483 | 2:-23570535 | MsG0280007950.01.T01:CDS |
TTTGGGTCAAAATCGTTGGG+AGG | 0.604453 | 2:+23571069 | None:intergenic |
AACGAGGACATTCTACTCAT+CGG | 0.605034 | 2:+23570397 | None:intergenic |
TTGAACCCGGTGAAACGGGT+CGG | 0.605348 | 2:-23570744 | MsG0280007950.01.T01:CDS |
GAATCACCCGGAAAACGCAC+CGG | 0.609243 | 2:-23570791 | MsG0280007950.01.T01:CDS |
TTACGATGCGAAGAATCACC+CGG | 0.618070 | 2:-23570803 | MsG0280007950.01.T01:CDS |
ATGAATCATGAGAACCGAGC+CGG | 0.622623 | 2:-23570547 | MsG0280007950.01.T01:CDS |
TCGTGTAACGGTGGTGACGG+CGG | 0.631472 | 2:+23570867 | None:intergenic |
CCACCACCACCGTCGCACGA+CGG | 0.636807 | 2:+23570334 | None:intergenic |
GTCGAGTCCTCGTGTAACGG+TGG | 0.638220 | 2:+23570858 | None:intergenic |
CCAAAAGGTTACAATCTCAA+CGG | 0.650816 | 2:-23571051 | MsG0280007950.01.T01:CDS |
GCCGTCACCACCGTTACACG+AGG | 0.682353 | 2:-23570865 | MsG0280007950.01.T01:CDS |
GATGTGCCTACAAGAAACGA+AGG | 0.695363 | 2:-23570460 | MsG0280007950.01.T01:CDS |
TTCGCATCGTAAAAGAACAA+CGG | 0.699917 | 2:+23570814 | None:intergenic |
AGAAAACGAGCTGAGTACGA+CGG | 0.731058 | 2:+23570911 | None:intergenic |
CGGAAGAGAAGCGATGACGG+TGG | 0.735936 | 2:+23570834 | None:intergenic |
ACTAAGAATTCTCTTAAACG+AGG | 0.745427 | 2:+23570381 | None:intergenic |
AAACGAGCTGAGTACGACGG+CGG | 0.753211 | 2:+23570914 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | GTAAACATTTATAACAACAT+CGG | + | Chr2:23570793-23570812 | None:intergenic | 20.0% |
!! | TAAACATTTATAACAACATC+GGG | + | Chr2:23570792-23570811 | None:intergenic | 20.0% |
!! | TCGAATTACAATCAAAATAA+AGG | - | Chr2:23571113-23571132 | MsG0280007950.01.T01:CDS | 20.0% |
! | AGAGAATTCTTAGTATGAAT+TGG | - | Chr2:23571027-23571046 | MsG0280007950.01.T01:CDS | 25.0% |
! | ATTCTTAGTATGAATTGGAA+AGG | - | Chr2:23571032-23571051 | MsG0280007950.01.T01:CDS | 25.0% |
! | TGGAAACTATGTTTACATTT+CGG | + | Chr2:23570687-23570706 | None:intergenic | 25.0% |
! | TGTTATAAATGTTTACGAAC+CGG | - | Chr2:23570797-23570816 | MsG0280007950.01.T01:CDS | 25.0% |
! | TTCTTAGTATGAATTGGAAA+GGG | - | Chr2:23571033-23571052 | MsG0280007950.01.T01:CDS | 25.0% |
ACATATCAATACACTCAGTA+TGG | + | Chr2:23570707-23570726 | None:intergenic | 30.0% | |
ACTAAGAATTCTCTTAAACG+AGG | + | Chr2:23571021-23571040 | None:intergenic | 30.0% | |
GTTCTCATGATTCATATCTT+CGG | + | Chr2:23570847-23570866 | None:intergenic | 30.0% | |
TTGATTGTAATTCGAAGCTT+CGG | + | Chr2:23571108-23571127 | None:intergenic | 30.0% | |
! | ATACTGAGTGTATTGATATG+TGG | - | Chr2:23570706-23570725 | MsG0280007950.01.T01:CDS | 30.0% |
AAACGATGATGAAGAAGAGA+AGG | + | Chr2:23570398-23570417 | None:intergenic | 35.0% | |
AAATGTTTACGAACCGGAAA+CGG | - | Chr2:23570803-23570822 | MsG0280007950.01.T01:CDS | 35.0% | |
CATTTATAACAACATCGGGT+CGG | + | Chr2:23570788-23570807 | None:intergenic | 35.0% | |
CCAAAAGGTTACAATCTCAA+CGG | - | Chr2:23570348-23570367 | MsG0280007950.01.T01:CDS | 35.0% | |
GATAAACAAACAGCACATTC+CGG | + | Chr2:23570630-23570649 | None:intergenic | 35.0% | |
GATGAAGAAGAGAAGGATAA+TGG | + | Chr2:23570391-23570410 | None:intergenic | 35.0% | |
TTCGCATCGTAAAAGAACAA+CGG | + | Chr2:23570588-23570607 | None:intergenic | 35.0% | |
! | CGTTGAGATTGTAACCTTTT+GGG | + | Chr2:23570350-23570369 | None:intergenic | 35.0% |
!! | GGAATGTGCTGTTTGTTTAT+CGG | - | Chr2:23570629-23570648 | MsG0280007950.01.T01:CDS | 35.0% |
!! | TTTTGATCTCTGGGGAATTT+GGG | + | Chr2:23570309-23570328 | None:intergenic | 35.0% |
AACGAGGACATTCTACTCAT+CGG | + | Chr2:23571005-23571024 | None:intergenic | 40.0% | |
AATGTTTACGAACCGGAAAC+GGG | - | Chr2:23570804-23570823 | MsG0280007950.01.T01:CDS | 40.0% | |
ATTCATATCTTCGGTCGAAC+CGG | + | Chr2:23570838-23570857 | None:intergenic | 40.0% | |
CGAAAACCTTCGTTTCTTGT+AGG | + | Chr2:23570948-23570967 | None:intergenic | 40.0% | |
TGTTTATCGGAGTTTGAACC+CGG | - | Chr2:23570642-23570661 | MsG0280007950.01.T01:CDS | 40.0% | |
! | CCGTTGAGATTGTAACCTTT+TGG | + | Chr2:23570351-23570370 | None:intergenic | 40.0% |
!! | ACCTTTTGGGTCAAAATCGT+TGG | + | Chr2:23570337-23570356 | None:intergenic | 40.0% |
!! | CCTTTTGGGTCAAAATCGTT+GGG | + | Chr2:23570336-23570355 | None:intergenic | 40.0% |
!! | GTTTTGATCTCTGGGGAATT+TGG | + | Chr2:23570310-23570329 | None:intergenic | 40.0% |
!! | TAAAGAGGTTGGTTCGAGTT+CGG | - | Chr2:23570875-23570894 | MsG0280007950.01.T01:CDS | 40.0% |
AAGGAGAAAGCCGTCATTTG+CGG | - | Chr2:23570905-23570924 | MsG0280007950.01.T01:CDS | 45.0% | |
ACTCGAACCAACCTCTTTAC+CGG | + | Chr2:23570874-23570893 | None:intergenic | 45.0% | |
AGAAAACGAGCTGAGTACGA+CGG | + | Chr2:23570491-23570510 | None:intergenic | 45.0% | |
ATGAATCATGAGAACCGAGC+CGG | - | Chr2:23570852-23570871 | MsG0280007950.01.T01:CDS | 45.0% | |
ATGACACGTGTCCTCTTTGT+CGG | - | Chr2:23570739-23570758 | MsG0280007950.01.T01:CDS | 45.0% | |
GATGTGCCTACAAGAAACGA+AGG | - | Chr2:23570939-23570958 | MsG0280007950.01.T01:CDS | 45.0% | |
GGTACCAACGAGCGTAAATA+TGG | + | Chr2:23570434-23570453 | None:intergenic | 45.0% | |
GTCTCCATATTTACGCTCGT+TGG | - | Chr2:23570427-23570446 | MsG0280007950.01.T01:CDS | 45.0% | |
TTACGATGCGAAGAATCACC+CGG | - | Chr2:23570596-23570615 | MsG0280007950.01.T01:CDS | 45.0% | |
TTGGGTCAAAATCGTTGGGA+GGG | + | Chr2:23570332-23570351 | None:intergenic | 45.0% | |
TTTGGGTCAAAATCGTTGGG+AGG | + | Chr2:23570333-23570352 | None:intergenic | 45.0% | |
! | ATCTCTGGGGAATTTGGGTA+TGG | + | Chr2:23570304-23570323 | None:intergenic | 45.0% |
! | TCTCTGGGGAATTTGGGTAT+GGG | + | Chr2:23570303-23570322 | None:intergenic | 45.0% |
!! | CCCAACGATTTTGACCCAAA+AGG | - | Chr2:23570333-23570352 | MsG0280007950.01.T01:CDS | 45.0% |
!! | TTGGGAGGGTTTTGATCTCT+GGG | + | Chr2:23570318-23570337 | None:intergenic | 45.0% |
AATGTTTCTCCGTCGTGCGA+CGG | - | Chr2:23571056-23571075 | MsG0280007950.01.T01:CDS | 50.0% | |
ACATTCTACTCATCGGCGAC+CGG | + | Chr2:23570998-23571017 | None:intergenic | 50.0% | |
ACTGTCACTCCCGCAAATGA+CGG | + | Chr2:23570918-23570937 | None:intergenic | 50.0% | |
AGGAGAAAGCCGTCATTTGC+GGG | - | Chr2:23570906-23570925 | MsG0280007950.01.T01:CDS | 50.0% | |
CAACGGAAGAGAAGCGATGA+CGG | + | Chr2:23570571-23570590 | None:intergenic | 50.0% | |
GAGTTTGAACCCGGTGAAAC+GGG | - | Chr2:23570651-23570670 | MsG0280007950.01.T01:CDS | 50.0% | |
GGAGTTTGAACCCGGTGAAA+CGG | - | Chr2:23570650-23570669 | MsG0280007950.01.T01:CDS | 50.0% | |
TAAAACCCGACCCGTTTCAC+CGG | + | Chr2:23570664-23570683 | None:intergenic | 50.0% | |
! | AACCAACCTCTTTACCGGCT+CGG | + | Chr2:23570869-23570888 | None:intergenic | 50.0% |
! | TCGGTTTTGCATGGGCTCAA+CGG | + | Chr2:23570769-23570788 | None:intergenic | 50.0% |
!! | AACATCGGGTCGGTTTTGCA+TGG | + | Chr2:23570778-23570797 | None:intergenic | 50.0% |
!! | ACATCGGGTCGGTTTTGCAT+GGG | + | Chr2:23570777-23570796 | None:intergenic | 50.0% |
!! | GTTCGAGTTCGGTTGGCTTA+AGG | - | Chr2:23570886-23570905 | MsG0280007950.01.T01:CDS | 50.0% |
!! | GTTGGGAGGGTTTTGATCTC+TGG | + | Chr2:23570319-23570338 | None:intergenic | 50.0% |
!! | TGGGAGGGTTTTGATCTCTG+GGG | + | Chr2:23570317-23570336 | None:intergenic | 50.0% |
AAAACCCGACCCGTTTCACC+GGG | + | Chr2:23570663-23570682 | None:intergenic | 55.0% | |
AAACGAGCTGAGTACGACGG+CGG | + | Chr2:23570488-23570507 | None:intergenic | 55.0% | |
AACCGAGCCGGTAAAGAGGT+TGG | - | Chr2:23570864-23570883 | MsG0280007950.01.T01:CDS | 55.0% | |
ACCTTCTCCAATCTCGTCGC+CGG | - | Chr2:23570451-23570470 | MsG0280007950.01.T01:CDS | 55.0% | |
CCGGAACTTGAACCCGTTTC+CGG | + | Chr2:23570819-23570838 | None:intergenic | 55.0% | |
CGACTCAGTCATCGTCGTTC+CGG | - | Chr2:23570976-23570995 | MsG0280007950.01.T01:CDS | 55.0% | |
GAATCACCCGGAAAACGCAC+CGG | - | Chr2:23570608-23570627 | MsG0280007950.01.T01:CDS | 55.0% | |
TCCTCGTGTAACGGTGGTGA+CGG | + | Chr2:23570538-23570557 | None:intergenic | 55.0% | |
TGAGAACCGAGCCGGTAAAG+AGG | - | Chr2:23570860-23570879 | MsG0280007950.01.T01:CDS | 55.0% | |
TTGAACCCGGTGAAACGGGT+CGG | - | Chr2:23570655-23570674 | MsG0280007950.01.T01:CDS | 55.0% | |
! | CACATTCCGGTGCGTTTTCC+GGG | + | Chr2:23570617-23570636 | None:intergenic | 55.0% |
! | CCGGAAACGGGTTCAAGTTC+CGG | - | Chr2:23570816-23570835 | MsG0280007950.01.T01:CDS | 55.0% |
! | CGGTTTTGCATGGGCTCAAC+GGG | + | Chr2:23570768-23570787 | None:intergenic | 55.0% |
! | GCACATTCCGGTGCGTTTTC+CGG | + | Chr2:23570618-23570637 | None:intergenic | 55.0% |
!! | GAGGTTGGTTCGAGTTCGGT+TGG | - | Chr2:23570879-23570898 | MsG0280007950.01.T01:CDS | 55.0% |
GACGGCGGATACGGTTTCTC+CGG | + | Chr2:23570473-23570492 | None:intergenic | 60.0% | |
GCTGAGTACGACGGCGGATA+CGG | + | Chr2:23570482-23570501 | None:intergenic | 60.0% | |
GGTTTCTCCGGCGACGAGAT+TGG | + | Chr2:23570461-23570480 | None:intergenic | 60.0% | |
GTCGAGTCCTCGTGTAACGG+TGG | + | Chr2:23570544-23570563 | None:intergenic | 60.0% | |
TCAACGGGCGTCCGACAAAG+AGG | + | Chr2:23570753-23570772 | None:intergenic | 60.0% | |
TCCGGCGACGAGATTGGAGA+AGG | + | Chr2:23570455-23570474 | None:intergenic | 60.0% | |
TGAACCCGGTGAAACGGGTC+GGG | - | Chr2:23570656-23570675 | MsG0280007950.01.T01:CDS | 60.0% | |
! | CGGAAGAGAAGCGATGACGG+TGG | + | Chr2:23570568-23570587 | None:intergenic | 60.0% |
! | GGCGGCGTTTGTTGGGTCAT+CGG | + | Chr2:23570517-23570536 | None:intergenic | 60.0% |
! | GGCGTCGAGTCCTCGTGTAA+CGG | + | Chr2:23570547-23570566 | None:intergenic | 60.0% |
!! | TCGTGTAACGGTGGTGACGG+CGG | + | Chr2:23570535-23570554 | None:intergenic | 60.0% |
!! | TGGTGACGGCGGCGTTTGTT+GGG | + | Chr2:23570524-23570543 | None:intergenic | 60.0% |
!! | TGGTGGTGGTGGGTGTAGCT+CGG | - | Chr2:23571079-23571098 | MsG0280007950.01.T01:CDS | 60.0% |
GCCGTCACCACCGTTACACG+AGG | - | Chr2:23570534-23570553 | MsG0280007950.01.T01:CDS | 65.0% | |
GTTTCTCCGTCGTGCGACGG+TGG | - | Chr2:23571059-23571078 | MsG0280007950.01.T01:CDS | 65.0% | |
!! | GTGGTGACGGCGGCGTTTGT+TGG | + | Chr2:23570525-23570544 | None:intergenic | 65.0% |
CCACCACCACCGTCGCACGA+CGG | + | Chr2:23571068-23571087 | None:intergenic | 70.0% | |
TCTCCGTCGTGCGACGGTGG+TGG | - | Chr2:23571062-23571081 | MsG0280007950.01.T01:CDS | 70.0% | |
!! | CGTGCGACGGTGGTGGTGGT+GGG | - | Chr2:23571069-23571088 | MsG0280007950.01.T01:CDS | 70.0% |
!! | TCGTGCGACGGTGGTGGTGG+TGG | - | Chr2:23571068-23571087 | MsG0280007950.01.T01:CDS | 70.0% |
! | CCGTCGTGCGACGGTGGTGG+TGG | - | Chr2:23571065-23571084 | MsG0280007950.01.T01:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr2 | gene | 23570279 | 23571142 | 23570279 | ID=MsG0280007950.01;Name=MsG0280007950.01 |
Chr2 | mRNA | 23570279 | 23571142 | 23570279 | ID=MsG0280007950.01.T01;Parent=MsG0280007950.01;Name=MsG0280007950.01.T01;_AED=0.29;_eAED=0.29;_QI=0|-1|0|1|-1|1|1|0|287 |
Chr2 | exon | 23570279 | 23571142 | 23570279 | ID=MsG0280007950.01.T01:exon:18538;Parent=MsG0280007950.01.T01 |
Chr2 | CDS | 23570279 | 23571142 | 23570279 | ID=MsG0280007950.01.T01:cds;Parent=MsG0280007950.01.T01 |
Gene Sequence |
Protein sequence |