Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580029205.01.T01 | XP_003616654.2 | 98.243 | 683 | 12 | 0 | 1 | 683 | 1 | 683 | 0 | 1390 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580029205.01.T01 | Q9XEE6 | 51.076 | 697 | 226 | 21 | 1 | 683 | 1 | 596 | 0 | 601 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580029205.01.T01 | G7K252 | 98.243 | 683 | 12 | 0 | 1 | 683 | 1 | 683 | 0.0 | 1390 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0380015862.01 | MsG0580029205.01 | 0.817864 | 2.643694e-52 | 1.947888e-49 |
| MsG0280007950.01 | MsG0580029205.01 | 0.804050 | 2.601890e-49 | 1.328260e-46 |
| MsG0280008007.01 | MsG0580029205.01 | 0.866671 | 2.403632e-65 | 8.169090e-62 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0580029205.01 | MsG0580028434.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580029205.01.T01 | MTR_5g082830 | 98.243 | 683 | 12 | 0 | 1 | 683 | 1 | 683 | 0.0 | 1390 |
| MsG0580029205.01.T01 | MTR_5g071070 | 48.615 | 722 | 312 | 14 | 1 | 682 | 1 | 703 | 0.0 | 642 |
| MsG0580029205.01.T01 | MTR_5g071070 | 49.375 | 640 | 270 | 13 | 78 | 682 | 1 | 621 | 0.0 | 579 |
| MsG0580029205.01.T01 | MTR_1g075890 | 44.444 | 693 | 289 | 17 | 1 | 643 | 1 | 647 | 1.72e-175 | 516 |
| MsG0580029205.01.T01 | MTR_7g092070 | 43.034 | 725 | 302 | 21 | 30 | 683 | 47 | 731 | 1.04e-168 | 501 |
| MsG0580029205.01.T01 | MTR_3g070880 | 62.500 | 400 | 85 | 7 | 16 | 414 | 1 | 336 | 7.03e-166 | 486 |
| MsG0580029205.01.T01 | MTR_3g070880 | 57.143 | 203 | 62 | 8 | 474 | 674 | 336 | 515 | 5.55e-54 | 194 |
| MsG0580029205.01.T01 | MTR_3g029590 | 40.496 | 726 | 317 | 22 | 28 | 678 | 43 | 728 | 1.85e-146 | 444 |
| MsG0580029205.01.T01 | MTR_3g464260 | 46.712 | 441 | 158 | 10 | 33 | 463 | 28 | 401 | 7.33e-117 | 360 |
| MsG0580029205.01.T01 | MTR_3g464260 | 31.050 | 219 | 105 | 9 | 477 | 683 | 345 | 529 | 1.73e-13 | 73.9 |
| MsG0580029205.01.T01 | MTR_3g464280 | 38.924 | 632 | 236 | 19 | 1 | 624 | 1 | 490 | 2.52e-110 | 342 |
| MsG0580029205.01.T01 | MTR_1g050438 | 37.452 | 526 | 254 | 13 | 30 | 509 | 15 | 511 | 5.48e-104 | 329 |
| MsG0580029205.01.T01 | MTR_0728s0020 | 37.452 | 526 | 254 | 13 | 30 | 509 | 31 | 527 | 1.99e-103 | 328 |
| MsG0580029205.01.T01 | MTR_3g435590 | 43.902 | 410 | 195 | 7 | 1 | 385 | 1 | 400 | 8.25e-103 | 322 |
| MsG0580029205.01.T01 | MTR_3g435680 | 46.048 | 291 | 119 | 6 | 133 | 398 | 44 | 321 | 1.21e-74 | 246 |
| MsG0580029205.01.T01 | MTR_3g464290 | 36.008 | 511 | 209 | 17 | 150 | 640 | 39 | 451 | 6.48e-71 | 238 |
| MsG0580029205.01.T01 | MTR_3g464270 | 36.066 | 427 | 191 | 15 | 216 | 638 | 8 | 356 | 9.53e-59 | 202 |
| MsG0580029205.01.T01 | MTR_8g102100 | 48.826 | 213 | 100 | 4 | 213 | 420 | 77 | 285 | 2.00e-54 | 191 |
| MsG0580029205.01.T01 | MTR_6g090380 | 68.519 | 108 | 34 | 0 | 212 | 319 | 98 | 205 | 2.45e-51 | 182 |
| MsG0580029205.01.T01 | MTR_3g103960 | 52.795 | 161 | 61 | 3 | 207 | 366 | 43 | 189 | 6.87e-49 | 173 |
| MsG0580029205.01.T01 | MTR_2g090605 | 64.865 | 111 | 37 | 1 | 217 | 325 | 77 | 187 | 9.18e-48 | 174 |
| MsG0580029205.01.T01 | MTR_4g078660 | 60.748 | 107 | 42 | 0 | 213 | 319 | 56 | 162 | 7.08e-46 | 166 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580029205.01.T01 | AT2G40140 | 51.076 | 697 | 226 | 21 | 1 | 683 | 1 | 596 | 0.0 | 601 |
| MsG0580029205.01.T01 | AT2G40140 | 51.076 | 697 | 226 | 21 | 1 | 683 | 1 | 596 | 0.0 | 601 |
| MsG0580029205.01.T01 | AT5G58620 | 49.629 | 673 | 245 | 16 | 28 | 683 | 12 | 607 | 0.0 | 589 |
| MsG0580029205.01.T01 | AT3G55980 | 50.072 | 691 | 226 | 17 | 1 | 683 | 1 | 580 | 0.0 | 579 |
| MsG0580029205.01.T01 | AT3G55980 | 47.299 | 685 | 254 | 18 | 1 | 683 | 68 | 647 | 8.16e-179 | 524 |
| MsG0580029205.01.T01 | AT2G41900 | 40.393 | 713 | 319 | 19 | 30 | 683 | 48 | 713 | 3.64e-144 | 437 |
| MsG0580029205.01.T01 | AT5G12850 | 40.608 | 724 | 306 | 25 | 25 | 678 | 37 | 706 | 2.82e-143 | 435 |
| MsG0580029205.01.T01 | AT5G07500 | 62.698 | 126 | 47 | 0 | 194 | 319 | 29 | 154 | 3.97e-55 | 189 |
| MsG0580029205.01.T01 | AT4G29190 | 46.256 | 227 | 110 | 4 | 195 | 420 | 58 | 273 | 1.47e-54 | 191 |
| MsG0580029205.01.T01 | AT2G25900 | 68.224 | 107 | 34 | 0 | 213 | 319 | 86 | 192 | 4.08e-51 | 180 |
| MsG0580029205.01.T01 | AT2G25900 | 68.224 | 107 | 34 | 0 | 213 | 319 | 86 | 192 | 4.08e-51 | 180 |
| MsG0580029205.01.T01 | AT2G19810 | 63.559 | 118 | 43 | 0 | 202 | 319 | 63 | 180 | 1.12e-50 | 180 |
| MsG0580029205.01.T01 | AT1G03790 | 55.263 | 152 | 54 | 3 | 213 | 360 | 78 | 219 | 8.88e-49 | 176 |
| MsG0580029205.01.T01 | AT5G44260 | 62.963 | 108 | 39 | 1 | 213 | 319 | 56 | 163 | 3.73e-44 | 163 |
Find 204 sgRNAs with CRISPR-Local
Find 220 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGCGAAGGTGGTTCATGTTT+TGG | 0.196801 | 5:-93696291 | None:intergenic |
| CTGAGGAAATCCGCTTCTTT+TGG | 0.197101 | 5:+93696595 | MsG0580029205.01.T01:CDS |
| CTGCCACATGTTTCCACTCT+TGG | 0.215837 | 5:-93695903 | None:intergenic |
| ACTCGCAAGAATCCCCTTTC+TGG | 0.236566 | 5:-93695595 | None:intergenic |
| CTTATGATTGCTTCCTTGTT+TGG | 0.250098 | 5:+93695011 | MsG0580029205.01.T01:CDS |
| GACATAAACAACGGTGTATA+TGG | 0.256569 | 5:+93695401 | MsG0580029205.01.T01:CDS |
| CGATTTGGACAACGAATTAA+AGG | 0.268967 | 5:-93695243 | None:intergenic |
| ATCTGTTGTGTGGGTGTTGA+TGG | 0.282762 | 5:-93696223 | None:intergenic |
| TGTAGTTGAGATCGTAAATT+AGG | 0.287165 | 5:-93696184 | None:intergenic |
| GTCGTCCGGCCTTTCAGATT+GGG | 0.298046 | 5:+93696519 | MsG0580029205.01.T01:CDS |
| TACACAGGGCGCAGCTCTTC+GGG | 0.300339 | 5:-93695725 | None:intergenic |
| TGTCGTCCGGCCTTTCAGAT+TGG | 0.305721 | 5:+93696518 | MsG0580029205.01.T01:CDS |
| GCTCTTCATTGTGCTGTTGC+TGG | 0.308167 | 5:+93695113 | MsG0580029205.01.T01:CDS |
| CAACACCTTCCTACGCGATT+TGG | 0.321673 | 5:-93695258 | None:intergenic |
| CGGAGTTTGTGGTTCCGATA+TGG | 0.322011 | 5:+93695085 | MsG0580029205.01.T01:CDS |
| CACGACCCCTTGCGAAACTC+TGG | 0.328143 | 5:-93695572 | None:intergenic |
| TTGGGTTAATTCATTGGTTA+AGG | 0.328824 | 5:+93696678 | MsG0580029205.01.T01:CDS |
| TGCCACATGTTTCCACTCTT+GGG | 0.340074 | 5:-93695902 | None:intergenic |
| AAGAATTGGATCGAAGAAAA+TGG | 0.341157 | 5:+93694968 | MsG0580029205.01.T01:CDS |
| CAGCTGCAGTGATGAATTCT+AGG | 0.343853 | 5:+93696395 | MsG0580029205.01.T01:CDS |
| TGTCTCTTGGGTTAATTCAT+TGG | 0.351526 | 5:+93696672 | MsG0580029205.01.T01:CDS |
| TCTGAGAATTCCGGTGTATA+TGG | 0.353483 | 5:+93696709 | MsG0580029205.01.T01:CDS |
| TTTGGCCCATGTTCATGTTT+TGG | 0.358068 | 5:-93696273 | None:intergenic |
| CGCCTTCCAACCCTTCCTGC+AGG | 0.359580 | 5:+93696494 | MsG0580029205.01.T01:CDS |
| ATACACAGGGCGCAGCTCTT+CGG | 0.370872 | 5:-93695726 | None:intergenic |
| TATATGGATCAGATGAGTTT+AGG | 0.370932 | 5:+93695417 | MsG0580029205.01.T01:CDS |
| AGAAGTAGATGAGAAGGGTT+TGG | 0.379368 | 5:+93694914 | MsG0580029205.01.T01:CDS |
| GACATCAGGCTCAGCATGTT+GGG | 0.385432 | 5:-93696653 | None:intergenic |
| CTCCTCCTTGCATTCTCACC+TGG | 0.394967 | 5:-93695512 | None:intergenic |
| TAGGATCAGCTGATGCTAAT+AGG | 0.402231 | 5:-93696165 | None:intergenic |
| ATGCTGAGCCTGATGTCTCT+TGG | 0.404935 | 5:+93696659 | MsG0580029205.01.T01:CDS |
| AATAGGTCATCAAGGTTAGT+TGG | 0.407177 | 5:-93696148 | None:intergenic |
| CCCCACTGGGAAACTCGATT+GGG | 0.408358 | 5:+93696546 | MsG0580029205.01.T01:CDS |
| TTCTGTTGAATTCGCTGTTA+CGG | 0.410177 | 5:-93696111 | None:intergenic |
| GTCAATTCCACTAGCTGAAT+AGG | 0.414997 | 5:-93695783 | None:intergenic |
| GAGGAAGGCATATTGTTTGA+TGG | 0.415999 | 5:-93696322 | None:intergenic |
| TGGGATGCAGTTGGTGCTGC+TGG | 0.418675 | 5:-93696634 | None:intergenic |
| GTCAAGCTCTTGCTTGATGC+CGG | 0.418825 | 5:+93695161 | MsG0580029205.01.T01:CDS |
| TATGGTGAGGGCTTCCTCAC+TGG | 0.419808 | 5:-93696346 | None:intergenic |
| CGCAAGGGGTCGTGCCAGAA+AGG | 0.421946 | 5:+93695581 | MsG0580029205.01.T01:CDS |
| CGTCCTTGCAAAGCCTTGTT+CGG | 0.424614 | 5:-93695661 | None:intergenic |
| CAGCTGTAAGGGTATTTCCT+TGG | 0.426047 | 5:-93695539 | None:intergenic |
| ATTGATGTCAACGGAGTTTG+TGG | 0.428144 | 5:+93695074 | MsG0580029205.01.T01:CDS |
| TCGGGCAACGATATATCAAT+AGG | 0.428410 | 5:-93695380 | None:intergenic |
| GTCGAGTATATTCTTTCGAC+AGG | 0.429694 | 5:+93695047 | MsG0580029205.01.T01:CDS |
| CTGCAGCTGCCGCATATTCT+CGG | 0.430426 | 5:-93696734 | None:intergenic |
| GTGAGGAAGCCCTCACCATA+TGG | 0.432783 | 5:+93696349 | MsG0580029205.01.T01:CDS |
| GCACTCTTCAAACGGCTACC+TGG | 0.432870 | 5:-93695962 | None:intergenic |
| CGCCCTGTGTATGCCTCCAC+TGG | 0.433195 | 5:+93695737 | MsG0580029205.01.T01:CDS |
| AGCTGTAAGGGTATTTCCTT+GGG | 0.442755 | 5:-93695538 | None:intergenic |
| CCACTAGCTGAATAGGACTT+TGG | 0.443786 | 5:-93695776 | None:intergenic |
| CCCCTTGCGAAACTCTGGGC+AGG | 0.444998 | 5:-93695567 | None:intergenic |
| GATGTTCCATCTGAGAATTC+CGG | 0.446112 | 5:+93696700 | MsG0580029205.01.T01:CDS |
| AATTCGCTGTTACGGAAAGA+TGG | 0.453909 | 5:-93696103 | None:intergenic |
| GGGCAGGGAACACAGCTGTA+AGG | 0.457289 | 5:-93695551 | None:intergenic |
| GTTTAGGATGTACAGTTTCA+AGG | 0.458638 | 5:+93695433 | MsG0580029205.01.T01:CDS |
| ATGTGAATGAAGAAGGCTTT+TGG | 0.459210 | 5:+93694937 | MsG0580029205.01.T01:CDS |
| TGCTGAGCCTGATGTCTCTT+GGG | 0.461989 | 5:+93696660 | MsG0580029205.01.T01:CDS |
| TATACACCGTTGTTTATGTC+GGG | 0.462321 | 5:-93695398 | None:intergenic |
| CACTCAAAGCACTCTTCAAA+CGG | 0.468740 | 5:-93695970 | None:intergenic |
| TGAGATGGAATTGCTCGGTC+TGG | 0.469920 | 5:+93696009 | MsG0580029205.01.T01:CDS |
| GGCTTCCTCACTGGAGAGGA+AGG | 0.472160 | 5:-93696337 | None:intergenic |
| CTACCTGGGAGCTGCAACGA+TGG | 0.472506 | 5:-93695947 | None:intergenic |
| CAAGAGAGAAGTAGATGAGA+AGG | 0.474046 | 5:+93694908 | MsG0580029205.01.T01:CDS |
| TGGCGCATCTGCATTGCACT+TGG | 0.475619 | 5:-93696253 | None:intergenic |
| TTCTCACCTGGATGAACAAA+GGG | 0.476487 | 5:-93695500 | None:intergenic |
| AAGAGAGAAGTAGATGAGAA+GGG | 0.478152 | 5:+93694909 | MsG0580029205.01.T01:CDS |
| AACAAGGAAGCAATCATAAG+AGG | 0.482396 | 5:-93695008 | None:intergenic |
| CATGGAGGATAAGCTTCAAA+AGG | 0.484482 | 5:+93694827 | MsG0580029205.01.T01:CDS |
| GCTGGCGCAATCAGATCAAC+CGG | 0.486158 | 5:-93695221 | None:intergenic |
| CACTCTTCAAACGGCTACCT+GGG | 0.486258 | 5:-93695961 | None:intergenic |
| AGGCTTTGCAAGGACGAGAC+TGG | 0.489002 | 5:+93695668 | MsG0580029205.01.T01:CDS |
| CACCACGGTCAATGAAACTT+TGG | 0.491260 | 5:-93696444 | None:intergenic |
| GCAAGGGGTCGTGCCAGAAA+GGG | 0.492458 | 5:+93695582 | MsG0580029205.01.T01:CDS |
| GGTGCTGCAACTCACCATCT+TGG | 0.497686 | 5:+93696463 | MsG0580029205.01.T01:CDS |
| GGTTTGGATGTGAATGAAGA+AGG | 0.500120 | 5:+93694930 | MsG0580029205.01.T01:CDS |
| CCTTCCTGCAGGGTGTCGTC+CGG | 0.501860 | 5:+93696505 | MsG0580029205.01.T01:CDS |
| AACACCACCCATGTCTCCCT+TGG | 0.506352 | 5:+93695865 | MsG0580029205.01.T01:CDS |
| AAACTCGATTGGGGTGTAAA+CGG | 0.506355 | 5:+93696556 | MsG0580029205.01.T01:CDS |
| ATGAAGAGCAGTGGCCATAT+CGG | 0.506470 | 5:-93695099 | None:intergenic |
| CACTCTAGTGCTTCCAAACA+AGG | 0.508719 | 5:-93695024 | None:intergenic |
| TGAAGAGTGCTTTGAGTGCA+AGG | 0.510749 | 5:+93695975 | MsG0580029205.01.T01:CDS |
| TTGGCTGCGCTGCTTTGCAA+AGG | 0.511458 | 5:-93696425 | None:intergenic |
| CTTCATTGTGCTGTTGCTGG+TGG | 0.512690 | 5:+93695116 | MsG0580029205.01.T01:CDS |
| TCGTCCGGCCTTTCAGATTG+GGG | 0.513214 | 5:+93696520 | MsG0580029205.01.T01:CDS |
| AGCCTTGTTCGGTATTGTGC+GGG | 0.515045 | 5:-93695650 | None:intergenic |
| GCCTTCCAACCCTTCCTGCA+GGG | 0.517193 | 5:+93696495 | MsG0580029205.01.T01:CDS |
| CCACCCATGTCTCCCTTGGC+AGG | 0.517296 | 5:+93695869 | MsG0580029205.01.T01:CDS |
| AGACATCAGGCTCAGCATGT+TGG | 0.517932 | 5:-93696654 | None:intergenic |
| TTGTACATCTGCTCCACCCA+TGG | 0.518688 | 5:-93696787 | None:intergenic |
| TGATGCTAGTGGAAACAAAC+CGG | 0.520501 | 5:+93695202 | MsG0580029205.01.T01:CDS |
| CCCTGCCCAGAGTTTCGCAA+GGG | 0.522429 | 5:+93695566 | MsG0580029205.01.T01:CDS |
| TCGAGACGTGCTTCCACCAT+GGG | 0.522786 | 5:+93696771 | MsG0580029205.01.T01:CDS |
| TTCATCCAGGTGAGAATGCA+AGG | 0.523324 | 5:+93695507 | MsG0580029205.01.T01:CDS |
| ATTCGCTGTTACGGAAAGAT+GGG | 0.523731 | 5:-93696102 | None:intergenic |
| TCCCTGCCCAGAGTTTCGCA+AGG | 0.526817 | 5:+93695565 | MsG0580029205.01.T01:CDS |
| GGAACCCCAATCTGAAAGGC+CGG | 0.526956 | 5:-93696524 | None:intergenic |
| CGACACCCTGCAGGAAGGGT+TGG | 0.530365 | 5:-93696500 | None:intergenic |
| TGTGGGTGTTGATGGTTGCA+TGG | 0.532531 | 5:-93696215 | None:intergenic |
| GTACAAAGAGCAGGAGCAGA+TGG | 0.534247 | 5:+93696804 | MsG0580029205.01.T01:CDS |
| CCACCATCGTTGCAGCTCCC+AGG | 0.534409 | 5:+93695944 | MsG0580029205.01.T01:CDS |
| GAATTAACCCAAGAGACATC+AGG | 0.537150 | 5:-93696667 | None:intergenic |
| GGAGCAGATGTACAAAGAGC+AGG | 0.537466 | 5:+93696795 | MsG0580029205.01.T01:CDS |
| ACGACCCCTTGCGAAACTCT+GGG | 0.538237 | 5:-93695571 | None:intergenic |
| CGGACGACACCCTGCAGGAA+GGG | 0.538863 | 5:-93696504 | None:intergenic |
| CCAAAGTCCTATTCAGCTAG+TGG | 0.541639 | 5:+93695776 | MsG0580029205.01.T01:CDS |
| TCAAGGTGAAGCCATGCTCA+AGG | 0.542484 | 5:+93695450 | MsG0580029205.01.T01:CDS |
| GAGTGTCCCTTTGTTCATCC+AGG | 0.543113 | 5:+93695494 | MsG0580029205.01.T01:CDS |
| AGAAAATGGAATCCGAAAAG+AGG | 0.548081 | 5:+93694982 | MsG0580029205.01.T01:CDS |
| ATTTCTGAACCCAAAAGAAG+CGG | 0.548536 | 5:-93696605 | None:intergenic |
| GTTGTCCAAATCGCGTAGGA+AGG | 0.549554 | 5:+93695253 | MsG0580029205.01.T01:CDS |
| GGGAGATGATGAACCTGCCA+AGG | 0.553827 | 5:-93695882 | None:intergenic |
| ACCCTGCAGGAAGGGTTGGA+AGG | 0.554901 | 5:-93696496 | None:intergenic |
| TTGGACAACGAATTAAAGGC+TGG | 0.557548 | 5:-93695239 | None:intergenic |
| TGGAGAGTGCATCTGTTGTG+TGG | 0.558672 | 5:-93696233 | None:intergenic |
| GGCAGGGAACACAGCTGTAA+GGG | 0.559340 | 5:-93695550 | None:intergenic |
| ATATACACCGTTGTTTATGT+CGG | 0.561652 | 5:-93695399 | None:intergenic |
| GCTGATGAATCAAATCCATA+TGG | 0.562833 | 5:-93696364 | None:intergenic |
| AAGCCTTGTTCGGTATTGTG+CGG | 0.563056 | 5:-93695651 | None:intergenic |
| TTCTTCATCAGACTGTGCCA+TGG | 0.563892 | 5:+93694809 | MsG0580029205.01.T01:CDS |
| GAACCAGTGGAGGCATACAC+AGG | 0.565086 | 5:-93695740 | None:intergenic |
| CATCACTGCAGCTGCTACTG+CGG | 0.565349 | 5:-93696386 | None:intergenic |
| AAGGCCGGACGACACCCTGC+AGG | 0.568796 | 5:-93696509 | None:intergenic |
| GATCTTGAGATGGAATTGCT+CGG | 0.572830 | 5:+93696004 | MsG0580029205.01.T01:CDS |
| CCTGGGAGCTGCAACGATGG+TGG | 0.572925 | 5:-93695944 | None:intergenic |
| GATGCGCCAAAACATGAACA+TGG | 0.573046 | 5:+93696267 | MsG0580029205.01.T01:CDS |
| AGACGTGCTTCCACCATGGG+TGG | 0.573955 | 5:+93696774 | MsG0580029205.01.T01:CDS |
| AATTTACGATCTCAACTACA+TGG | 0.575156 | 5:+93696187 | MsG0580029205.01.T01:CDS |
| CTTGTTTGGAAGCACTAGAG+TGG | 0.576155 | 5:+93695025 | MsG0580029205.01.T01:CDS |
| CCCTTGCGAAACTCTGGGCA+GGG | 0.576535 | 5:-93695566 | None:intergenic |
| TGAACCTGCCAAGGGAGACA+TGG | 0.576779 | 5:-93695873 | None:intergenic |
| AGACAATTCAAGCAAGATTG+AGG | 0.577524 | 5:-93694862 | None:intergenic |
| ATGGAGGATAAGCTTCAAAA+GGG | 0.579380 | 5:+93694828 | MsG0580029205.01.T01:CDS |
| ATCCCGCACAATACCGAACA+AGG | 0.579739 | 5:+93695648 | MsG0580029205.01.T01:CDS |
| AAGACAATCAGCATCTGCAC+CGG | 0.580324 | 5:-93695180 | None:intergenic |
| CAAGGGCTTACTCTCACGAT+TGG | 0.580426 | 5:+93695468 | MsG0580029205.01.T01:CDS |
| GTCGAGACGTGCTTCCACCA+TGG | 0.580527 | 5:+93696770 | MsG0580029205.01.T01:CDS |
| GGAGAGTGCATCTGTTGTGT+GGG | 0.581542 | 5:-93696232 | None:intergenic |
| ATGGATAACTTGCGCGAAGG+TGG | 0.584205 | 5:-93696303 | None:intergenic |
| AAGGAGCGTCCATCTCCCCT+TGG | 0.584326 | 5:-93695319 | None:intergenic |
| TGAACTCATCCAAGGGGAGA+TGG | 0.584869 | 5:+93695310 | MsG0580029205.01.T01:CDS |
| CAAATCGCGTAGGAAGGTGT+TGG | 0.585250 | 5:+93695259 | MsG0580029205.01.T01:CDS |
| GCTGATTGTCTTGATGCTAG+TGG | 0.585414 | 5:+93695191 | MsG0580029205.01.T01:CDS |
| CTGATGCTAATAGGTCATCA+AGG | 0.586548 | 5:-93696156 | None:intergenic |
| CCGGACGACACCCTGCAGGA+AGG | 0.586791 | 5:-93696505 | None:intergenic |
| GAAGAGTGCTTTGAGTGCAA+GGG | 0.591839 | 5:+93695976 | MsG0580029205.01.T01:CDS |
| CAAGGTGAAGCCATGCTCAA+GGG | 0.594043 | 5:+93695451 | MsG0580029205.01.T01:CDS |
| CAAGGGGTCGTGCCAGAAAG+GGG | 0.599774 | 5:+93695583 | MsG0580029205.01.T01:CDS |
| ATACCGAACAAGGCTTTGCA+AGG | 0.600596 | 5:+93695658 | MsG0580029205.01.T01:CDS |
| TGCTGCTGCTGTTGACGACG+AGG | 0.602651 | 5:-93696037 | None:intergenic |
| GAATCAAATCCATATGGTGA+GGG | 0.607337 | 5:-93696358 | None:intergenic |
| AGGATTTGGATTATGTGCAG+TGG | 0.608930 | 5:+93694771 | None:intergenic |
| GTAAGTGCTGAACTCATCCA+AGG | 0.609847 | 5:+93695302 | MsG0580029205.01.T01:CDS |
| TGAGAGTAAGCCCTTGAGCA+TGG | 0.609898 | 5:-93695461 | None:intergenic |
| CCTGCCCAGAGTTTCGCAAG+GGG | 0.612209 | 5:+93695567 | MsG0580029205.01.T01:CDS |
| ATTCTCACCTGGATGAACAA+AGG | 0.616516 | 5:-93695501 | None:intergenic |
| TGGATGAACAAAGGGACACT+CGG | 0.617153 | 5:-93695492 | None:intergenic |
| GGTTCATCATCTCCCAAGAG+TGG | 0.617657 | 5:+93695890 | MsG0580029205.01.T01:CDS |
| CTGCAGGAAGGGTTGGAAGG+CGG | 0.621056 | 5:-93696493 | None:intergenic |
| GGTGTTGAAACAGTTGACAT+AGG | 0.621294 | 5:-93695848 | None:intergenic |
| ATTCGTTGTCCAAATCGCGT+AGG | 0.621353 | 5:+93695249 | MsG0580029205.01.T01:CDS |
| TCAGCATGTTGGGATGCAGT+TGG | 0.624317 | 5:-93696643 | None:intergenic |
| TGAATCAAATCCATATGGTG+AGG | 0.627563 | 5:-93696359 | None:intergenic |
| GCTGAATAGGACTTTGGTGA+AGG | 0.628923 | 5:-93695770 | None:intergenic |
| TATACACCGGAATTCTCAGA+TGG | 0.629638 | 5:-93696706 | None:intergenic |
| AGGCATAGCTGAACCAGTGG+AGG | 0.631941 | 5:-93695750 | None:intergenic |
| CCCACTGGGAAACTCGATTG+GGG | 0.632471 | 5:+93696547 | MsG0580029205.01.T01:CDS |
| TACATCTGCTCCACCCATGG+TGG | 0.632978 | 5:-93696784 | None:intergenic |
| ATGCAAGGAGGAGAGACCCA+AGG | 0.635278 | 5:+93695522 | MsG0580029205.01.T01:CDS |
| GGAGATGATGAACCTGCCAA+GGG | 0.637245 | 5:-93695881 | None:intergenic |
| GAACCTGCCAAGGGAGACAT+GGG | 0.638207 | 5:-93695872 | None:intergenic |
| AGCCAAAGTTTCATTGACCG+TGG | 0.638346 | 5:+93696442 | MsG0580029205.01.T01:CDS |
| TATATGGTGCCGAGAATATG+CGG | 0.638645 | 5:+93696725 | MsG0580029205.01.T01:CDS |
| TGAGGGCTTCCTCACTGGAG+AGG | 0.638650 | 5:-93696341 | None:intergenic |
| TTCATCAGACTGTGCCATGG+AGG | 0.642039 | 5:+93694812 | MsG0580029205.01.T01:CDS |
| AACAGCACAATGAAGAGCAG+TGG | 0.643629 | 5:-93695108 | None:intergenic |
| TAAGTGCTGAACTCATCCAA+GGG | 0.645605 | 5:+93695303 | MsG0580029205.01.T01:CDS |
| AACCAGTGGAGGCATACACA+GGG | 0.645864 | 5:-93695739 | None:intergenic |
| CCCCAATCGAGTTTCCCAGT+GGG | 0.652420 | 5:-93696547 | None:intergenic |
| GCTGCAACGATGGTGGAGTG+AGG | 0.652628 | 5:-93695937 | None:intergenic |
| ACAGGGAAGATTGATGTCAA+CGG | 0.653698 | 5:+93695065 | MsG0580029205.01.T01:CDS |
| CCCAATCGAGTTTCCCAGTG+GGG | 0.653880 | 5:-93696546 | None:intergenic |
| ATGCGCCAAAACATGAACAT+GGG | 0.661793 | 5:+93696268 | MsG0580029205.01.T01:CDS |
| CCAATCGAGTTTCCCAGTGG+GGG | 0.662085 | 5:-93696545 | None:intergenic |
| CTCCCAAGAGTGGAAACATG+TGG | 0.663242 | 5:+93695900 | MsG0580029205.01.T01:CDS |
| AAGGGATCTCGATCTTGAGA+TGG | 0.663328 | 5:+93695994 | MsG0580029205.01.T01:CDS |
| TGAAGGCATAGCTGAACCAG+TGG | 0.664738 | 5:-93695753 | None:intergenic |
| GCTGTTACGGAAAGATGGGG+AGG | 0.665128 | 5:-93696098 | None:intergenic |
| ACCCCAATCGAGTTTCCCAG+TGG | 0.665168 | 5:-93696548 | None:intergenic |
| AAGGCGGAGAAAGTCCAAGA+TGG | 0.665195 | 5:-93696477 | None:intergenic |
| GATTCTTGCGAGTATGCACA+TGG | 0.665419 | 5:+93695605 | MsG0580029205.01.T01:CDS |
| TTCGCTGTTACGGAAAGATG+GGG | 0.672071 | 5:-93696101 | None:intergenic |
| GTGACGAGCTGAACAAGCTG+AGG | 0.679618 | 5:+93696578 | MsG0580029205.01.T01:CDS |
| GATGAGGAGCTAAGAGACAA+CGG | 0.680167 | 5:-93695821 | None:intergenic |
| GATGGTGAGTTGCAGCACCA+CGG | 0.682458 | 5:-93696459 | None:intergenic |
| AGTTGACATAGGCAAAGATG+AGG | 0.688585 | 5:-93695837 | None:intergenic |
| ATTCTCGGCACCATATACAC+CGG | 0.692075 | 5:-93696719 | None:intergenic |
| TCGAGTATATTCTTTCGACA+GGG | 0.693087 | 5:+93695048 | MsG0580029205.01.T01:CDS |
| TTGATGGATAACTTGCGCGA+AGG | 0.700054 | 5:-93696306 | None:intergenic |
| AAGTGCTGAACTCATCCAAG+GGG | 0.716976 | 5:+93695304 | MsG0580029205.01.T01:CDS |
| ATATGCCTTCCTCTCCAGTG+AGG | 0.717918 | 5:+93696332 | MsG0580029205.01.T01:CDS |
| TCGTTGCCCGACATAAACAA+CGG | 0.735153 | 5:+93695392 | MsG0580029205.01.T01:CDS |
| CCTGCCAAGGGAGACATGGG+TGG | 0.744203 | 5:-93695869 | None:intergenic |
| ATCCAGGTGAGAATGCAAGG+AGG | 0.764804 | 5:+93695510 | MsG0580029205.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| AAGAATTGGATCGAAGAAAA+TGG | + | Chr5:93694968-93694987 | MsG0580029205.01.T01:CDS | 30.0% | |
| AATTTACGATCTCAACTACA+TGG | + | Chr5:93696187-93696206 | MsG0580029205.01.T01:CDS | 30.0% | |
| ATATACACCGTTGTTTATGT+CGG | - | Chr5:93695402-93695421 | None:intergenic | 30.0% | |
| CCTTTCTCATTGAAAAAAGA+AGG | + | Chr5:93695338-93695357 | MsG0580029205.01.T01:CDS | 30.0% | |
| TATATGGATCAGATGAGTTT+AGG | + | Chr5:93695417-93695436 | MsG0580029205.01.T01:CDS | 30.0% | |
| TGTAGTTGAGATCGTAAATT+AGG | - | Chr5:93696187-93696206 | None:intergenic | 30.0% | |
| TTCTCATTGAAAAAAGAAGG+TGG | + | Chr5:93695341-93695360 | MsG0580029205.01.T01:CDS | 30.0% | |
| ! | TTGGGTTAATTCATTGGTTA+AGG | + | Chr5:93696678-93696697 | MsG0580029205.01.T01:CDS | 30.0% |
| ! | TTTTGGTATGGTAGAAGAAT+TGG | + | Chr5:93694954-93694973 | MsG0580029205.01.T01:CDS | 30.0% |
| !!! | CCTTCTTTTTTCAATGAGAA+AGG | - | Chr5:93695341-93695360 | None:intergenic | 30.0% |
| !!! | TCTTTTGGGTTCAGAAATAA+TGG | + | Chr5:93696610-93696629 | MsG0580029205.01.T01:CDS | 30.0% |
| AACAAGGAAGCAATCATAAG+AGG | - | Chr5:93695011-93695030 | None:intergenic | 35.0% | |
| AAGAGAGAAGTAGATGAGAA+GGG | + | Chr5:93694909-93694928 | MsG0580029205.01.T01:CDS | 35.0% | |
| AATAGGTCATCAAGGTTAGT+TGG | - | Chr5:93696151-93696170 | None:intergenic | 35.0% | |
| AGAAAATGGAATCCGAAAAG+AGG | + | Chr5:93694982-93695001 | MsG0580029205.01.T01:CDS | 35.0% | |
| AGACAATTCAAGCAAGATTG+AGG | - | Chr5:93694865-93694884 | None:intergenic | 35.0% | |
| ATGGAGGATAAGCTTCAAAA+GGG | + | Chr5:93694828-93694847 | MsG0580029205.01.T01:CDS | 35.0% | |
| ATTTCTGAACCCAAAAGAAG+CGG | - | Chr5:93696608-93696627 | None:intergenic | 35.0% | |
| CTTATGATTGCTTCCTTGTT+TGG | + | Chr5:93695011-93695030 | MsG0580029205.01.T01:CDS | 35.0% | |
| GAATCAAATCCATATGGTGA+GGG | - | Chr5:93696361-93696380 | None:intergenic | 35.0% | |
| GACATAAACAACGGTGTATA+TGG | + | Chr5:93695401-93695420 | MsG0580029205.01.T01:CDS | 35.0% | |
| GCTGATGAATCAAATCCATA+TGG | - | Chr5:93696367-93696386 | None:intergenic | 35.0% | |
| TATACACCGTTGTTTATGTC+GGG | - | Chr5:93695401-93695420 | None:intergenic | 35.0% | |
| TCGAGTATATTCTTTCGACA+GGG | + | Chr5:93695048-93695067 | MsG0580029205.01.T01:CDS | 35.0% | |
| TGAATCAAATCCATATGGTG+AGG | - | Chr5:93696362-93696381 | None:intergenic | 35.0% | |
| TGTCTCTTGGGTTAATTCAT+TGG | + | Chr5:93696672-93696691 | MsG0580029205.01.T01:CDS | 35.0% | |
| TTCTGTTGAATTCGCTGTTA+CGG | - | Chr5:93696114-93696133 | None:intergenic | 35.0% | |
| ! | AATGAAGAAGGCTTTTGGTA+TGG | + | Chr5:93694942-93694961 | MsG0580029205.01.T01:CDS | 35.0% |
| ! | ATGTGAATGAAGAAGGCTTT+TGG | + | Chr5:93694937-93694956 | MsG0580029205.01.T01:CDS | 35.0% |
| ! | CGATTTGGACAACGAATTAA+AGG | - | Chr5:93695246-93695265 | None:intergenic | 35.0% |
| ! | GTTTAGGATGTACAGTTTCA+AGG | + | Chr5:93695433-93695452 | MsG0580029205.01.T01:CDS | 35.0% |
| AAACTCGATTGGGGTGTAAA+CGG | + | Chr5:93696556-93696575 | MsG0580029205.01.T01:CDS | 40.0% | |
| AATTCGCTGTTACGGAAAGA+TGG | - | Chr5:93696106-93696125 | None:intergenic | 40.0% | |
| ACAGGGAAGATTGATGTCAA+CGG | + | Chr5:93695065-93695084 | MsG0580029205.01.T01:CDS | 40.0% | |
| AGAAGTAGATGAGAAGGGTT+TGG | + | Chr5:93694914-93694933 | MsG0580029205.01.T01:CDS | 40.0% | |
| AGTTGACATAGGCAAAGATG+AGG | - | Chr5:93695840-93695859 | None:intergenic | 40.0% | |
| ATGCGCCAAAACATGAACAT+GGG | + | Chr5:93696268-93696287 | MsG0580029205.01.T01:CDS | 40.0% | |
| ATTCGCTGTTACGGAAAGAT+GGG | - | Chr5:93696105-93696124 | None:intergenic | 40.0% | |
| ATTCTCACCTGGATGAACAA+AGG | - | Chr5:93695504-93695523 | None:intergenic | 40.0% | |
| ATTGATGTCAACGGAGTTTG+TGG | + | Chr5:93695074-93695093 | MsG0580029205.01.T01:CDS | 40.0% | |
| CAAGAGAGAAGTAGATGAGA+AGG | + | Chr5:93694908-93694927 | MsG0580029205.01.T01:CDS | 40.0% | |
| CATGGAGGATAAGCTTCAAA+AGG | + | Chr5:93694827-93694846 | MsG0580029205.01.T01:CDS | 40.0% | |
| CTGATGCTAATAGGTCATCA+AGG | - | Chr5:93696159-93696178 | None:intergenic | 40.0% | |
| GAATTAACCCAAGAGACATC+AGG | - | Chr5:93696670-93696689 | None:intergenic | 40.0% | |
| GATCTTGAGATGGAATTGCT+CGG | + | Chr5:93696004-93696023 | MsG0580029205.01.T01:CDS | 40.0% | |
| GATGTTCCATCTGAGAATTC+CGG | + | Chr5:93696700-93696719 | MsG0580029205.01.T01:CDS | 40.0% | |
| GGTTTGGATGTGAATGAAGA+AGG | + | Chr5:93694930-93694949 | MsG0580029205.01.T01:CDS | 40.0% | |
| GTCAATTCCACTAGCTGAAT+AGG | - | Chr5:93695786-93695805 | None:intergenic | 40.0% | |
| GTCGAGTATATTCTTTCGAC+AGG | + | Chr5:93695047-93695066 | MsG0580029205.01.T01:CDS | 40.0% | |
| TAGGATCAGCTGATGCTAAT+AGG | - | Chr5:93696168-93696187 | None:intergenic | 40.0% | |
| TATACACCGGAATTCTCAGA+TGG | - | Chr5:93696709-93696728 | None:intergenic | 40.0% | |
| TCGGGCAACGATATATCAAT+AGG | - | Chr5:93695383-93695402 | None:intergenic | 40.0% | |
| TCTGAGAATTCCGGTGTATA+TGG | + | Chr5:93696709-93696728 | MsG0580029205.01.T01:CDS | 40.0% | |
| TGATGCTAGTGGAAACAAAC+CGG | + | Chr5:93695202-93695221 | MsG0580029205.01.T01:CDS | 40.0% | |
| TTCTCACCTGGATGAACAAA+GGG | - | Chr5:93695503-93695522 | None:intergenic | 40.0% | |
| TTGGACAACGAATTAAAGGC+TGG | - | Chr5:93695242-93695261 | None:intergenic | 40.0% | |
| ! | CACTCAAAGCACTCTTCAAA+CGG | - | Chr5:93695973-93695992 | None:intergenic | 40.0% |
| ! | CATAAGAGGAGTCCTCTTTT+CGG | - | Chr5:93694997-93695016 | None:intergenic | 40.0% |
| ! | GAGGAAGGCATATTGTTTGA+TGG | - | Chr5:93696325-93696344 | None:intergenic | 40.0% |
| ! | GGTGTTGAAACAGTTGACAT+AGG | - | Chr5:93695851-93695870 | None:intergenic | 40.0% |
| ! | TATATGGTGCCGAGAATATG+CGG | + | Chr5:93696725-93696744 | MsG0580029205.01.T01:CDS | 40.0% |
| ! | TGAGGAAATCCGCTTCTTTT+GGG | + | Chr5:93696596-93696615 | MsG0580029205.01.T01:CDS | 40.0% |
| ! | TTTGGCCCATGTTCATGTTT+TGG | - | Chr5:93696276-93696295 | None:intergenic | 40.0% |
| !! | AGCTGTAAGGGTATTTCCTT+GGG | - | Chr5:93695541-93695560 | None:intergenic | 40.0% |
| !! | GTGTTGGAGATGTTTTTGAG+AGG | + | Chr5:93695275-93695294 | MsG0580029205.01.T01:CDS | 40.0% |
| !! | TAAGTGCTGAACTCATCCAA+GGG | + | Chr5:93695303-93695322 | MsG0580029205.01.T01:CDS | 40.0% |
| !!! | CTTTTGAAGCTTATCCTCCA+TGG | - | Chr5:93694829-93694848 | None:intergenic | 40.0% |
| AACAGCACAATGAAGAGCAG+TGG | - | Chr5:93695111-93695130 | None:intergenic | 45.0% | |
| AAGACAATCAGCATCTGCAC+CGG | - | Chr5:93695183-93695202 | None:intergenic | 45.0% | |
| AAGGGATCTCGATCTTGAGA+TGG | + | Chr5:93695994-93696013 | MsG0580029205.01.T01:CDS | 45.0% | |
| AGCCAAAGTTTCATTGACCG+TGG | + | Chr5:93696442-93696461 | MsG0580029205.01.T01:CDS | 45.0% | |
| ATACCGAACAAGGCTTTGCA+AGG | + | Chr5:93695658-93695677 | MsG0580029205.01.T01:CDS | 45.0% | |
| ATGAAGAGCAGTGGCCATAT+CGG | - | Chr5:93695102-93695121 | None:intergenic | 45.0% | |
| ATTCGTTGTCCAAATCGCGT+AGG | + | Chr5:93695249-93695268 | MsG0580029205.01.T01:CDS | 45.0% | |
| ATTCTCGGCACCATATACAC+CGG | - | Chr5:93696722-93696741 | None:intergenic | 45.0% | |
| CACCACGGTCAATGAAACTT+TGG | - | Chr5:93696447-93696466 | None:intergenic | 45.0% | |
| CACTCTAGTGCTTCCAAACA+AGG | - | Chr5:93695027-93695046 | None:intergenic | 45.0% | |
| CAGCTGCAGTGATGAATTCT+AGG | + | Chr5:93696395-93696414 | MsG0580029205.01.T01:CDS | 45.0% | |
| CCAAAGTCCTATTCAGCTAG+TGG | + | Chr5:93695776-93695795 | MsG0580029205.01.T01:CDS | 45.0% | |
| CCACTAGCTGAATAGGACTT+TGG | - | Chr5:93695779-93695798 | None:intergenic | 45.0% | |
| GATGAGGAGCTAAGAGACAA+CGG | - | Chr5:93695824-93695843 | None:intergenic | 45.0% | |
| GATGCGCCAAAACATGAACA+TGG | + | Chr5:93696267-93696286 | MsG0580029205.01.T01:CDS | 45.0% | |
| GATTCTTGCGAGTATGCACA+TGG | + | Chr5:93695605-93695624 | MsG0580029205.01.T01:CDS | 45.0% | |
| GCTGAATAGGACTTTGGTGA+AGG | - | Chr5:93695773-93695792 | None:intergenic | 45.0% | |
| GCTGATTGTCTTGATGCTAG+TGG | + | Chr5:93695191-93695210 | MsG0580029205.01.T01:CDS | 45.0% | |
| TCGTTGCCCGACATAAACAA+CGG | + | Chr5:93695392-93695411 | MsG0580029205.01.T01:CDS | 45.0% | |
| TGCCACATGTTTCCACTCTT+GGG | - | Chr5:93695905-93695924 | None:intergenic | 45.0% | |
| TGGATGAACAAAGGGACACT+CGG | - | Chr5:93695495-93695514 | None:intergenic | 45.0% | |
| TTCATCCAGGTGAGAATGCA+AGG | + | Chr5:93695507-93695526 | MsG0580029205.01.T01:CDS | 45.0% | |
| TTCGCTGTTACGGAAAGATG+GGG | - | Chr5:93696104-93696123 | None:intergenic | 45.0% | |
| TTCTTCATCAGACTGTGCCA+TGG | + | Chr5:93694809-93694828 | MsG0580029205.01.T01:CDS | 45.0% | |
| ! | CTGAGGAAATCCGCTTCTTT+TGG | + | Chr5:93696595-93696614 | MsG0580029205.01.T01:CDS | 45.0% |
| ! | TTGATGGATAACTTGCGCGA+AGG | - | Chr5:93696309-93696328 | None:intergenic | 45.0% |
| !! | AAGCCTTGTTCGGTATTGTG+CGG | - | Chr5:93695654-93695673 | None:intergenic | 45.0% |
| !! | AAGTGCTGAACTCATCCAAG+GGG | + | Chr5:93695304-93695323 | MsG0580029205.01.T01:CDS | 45.0% |
| !! | ATCTGTTGTGTGGGTGTTGA+TGG | - | Chr5:93696226-93696245 | None:intergenic | 45.0% |
| !! | CAGCTGTAAGGGTATTTCCT+TGG | - | Chr5:93695542-93695561 | None:intergenic | 45.0% |
| !! | CTTGTTTGGAAGCACTAGAG+TGG | + | Chr5:93695025-93695044 | MsG0580029205.01.T01:CDS | 45.0% |
| !! | GAAGAGTGCTTTGAGTGCAA+GGG | + | Chr5:93695976-93695995 | MsG0580029205.01.T01:CDS | 45.0% |
| !! | GGAGATGTTTTTGAGAGGTG+AGG | + | Chr5:93695280-93695299 | MsG0580029205.01.T01:CDS | 45.0% |
| !! | GTAAGTGCTGAACTCATCCA+AGG | + | Chr5:93695302-93695321 | MsG0580029205.01.T01:CDS | 45.0% |
| !! | TGAAGAGTGCTTTGAGTGCA+AGG | + | Chr5:93695975-93695994 | MsG0580029205.01.T01:CDS | 45.0% |
| !!! | CACATGGTGTTTTCGAGTCA+TGG | + | Chr5:93695621-93695640 | MsG0580029205.01.T01:CDS | 45.0% |
| AAGGCGGAGAAAGTCCAAGA+TGG | - | Chr5:93696480-93696499 | None:intergenic | 50.0% | |
| ACTCGCAAGAATCCCCTTTC+TGG | - | Chr5:93695598-93695617 | None:intergenic | 50.0% | |
| AGACATCAGGCTCAGCATGT+TGG | - | Chr5:93696657-93696676 | None:intergenic | 50.0% | |
| ATATGCCTTCCTCTCCAGTG+AGG | + | Chr5:93696332-93696351 | MsG0580029205.01.T01:CDS | 50.0% | |
| ATCCAGGTGAGAATGCAAGG+AGG | + | Chr5:93695510-93695529 | MsG0580029205.01.T01:CDS | 50.0% | |
| ATCCCGCACAATACCGAACA+AGG | + | Chr5:93695648-93695667 | MsG0580029205.01.T01:CDS | 50.0% | |
| ATGCTGAGCCTGATGTCTCT+TGG | + | Chr5:93696659-93696678 | MsG0580029205.01.T01:CDS | 50.0% | |
| CAACACCTTCCTACGCGATT+TGG | - | Chr5:93695261-93695280 | None:intergenic | 50.0% | |
| CAAGGGCTTACTCTCACGAT+TGG | + | Chr5:93695468-93695487 | MsG0580029205.01.T01:CDS | 50.0% | |
| CAAGGTGAAGCCATGCTCAA+GGG | + | Chr5:93695451-93695470 | MsG0580029205.01.T01:CDS | 50.0% | |
| CACTCTTCAAACGGCTACCT+GGG | - | Chr5:93695964-93695983 | None:intergenic | 50.0% | |
| CGGAGTTTGTGGTTCCGATA+TGG | + | Chr5:93695085-93695104 | MsG0580029205.01.T01:CDS | 50.0% | |
| CTCCCAAGAGTGGAAACATG+TGG | + | Chr5:93695900-93695919 | MsG0580029205.01.T01:CDS | 50.0% | |
| CTGCCACATGTTTCCACTCT+TGG | - | Chr5:93695906-93695925 | None:intergenic | 50.0% | |
| GACATCAGGCTCAGCATGTT+GGG | - | Chr5:93696656-93696675 | None:intergenic | 50.0% | |
| GAGTGTCCCTTTGTTCATCC+AGG | + | Chr5:93695494-93695513 | MsG0580029205.01.T01:CDS | 50.0% | |
| GGAGATGATGAACCTGCCAA+GGG | - | Chr5:93695884-93695903 | None:intergenic | 50.0% | |
| GGAGCAGATGTACAAAGAGC+AGG | + | Chr5:93696795-93696814 | MsG0580029205.01.T01:CDS | 50.0% | |
| GGTTCATCATCTCCCAAGAG+TGG | + | Chr5:93695890-93695909 | MsG0580029205.01.T01:CDS | 50.0% | |
| GTACAAAGAGCAGGAGCAGA+TGG | + | Chr5:93696804-93696823 | MsG0580029205.01.T01:CDS | 50.0% | |
| GTCAAGCTCTTGCTTGATGC+CGG | + | Chr5:93695161-93695180 | MsG0580029205.01.T01:CDS | 50.0% | |
| GTTGTCCAAATCGCGTAGGA+AGG | + | Chr5:93695253-93695272 | MsG0580029205.01.T01:CDS | 50.0% | |
| TCAAGGTGAAGCCATGCTCA+AGG | + | Chr5:93695450-93695469 | MsG0580029205.01.T01:CDS | 50.0% | |
| TCAGCATGTTGGGATGCAGT+TGG | - | Chr5:93696646-93696665 | None:intergenic | 50.0% | |
| TGAACTCATCCAAGGGGAGA+TGG | + | Chr5:93695310-93695329 | MsG0580029205.01.T01:CDS | 50.0% | |
| TGAGAGTAAGCCCTTGAGCA+TGG | - | Chr5:93695464-93695483 | None:intergenic | 50.0% | |
| TGAGATGGAATTGCTCGGTC+TGG | + | Chr5:93696009-93696028 | MsG0580029205.01.T01:CDS | 50.0% | |
| TGCTGAGCCTGATGTCTCTT+GGG | + | Chr5:93696660-93696679 | MsG0580029205.01.T01:CDS | 50.0% | |
| TTCATCAGACTGTGCCATGG+AGG | + | Chr5:93694812-93694831 | MsG0580029205.01.T01:CDS | 50.0% | |
| TTGTACATCTGCTCCACCCA+TGG | - | Chr5:93696790-93696809 | None:intergenic | 50.0% | |
| ! | AACCAGTGGAGGCATACACA+GGG | - | Chr5:93695742-93695761 | None:intergenic | 50.0% |
| ! | ATGGATAACTTGCGCGAAGG+TGG | - | Chr5:93696306-93696325 | None:intergenic | 50.0% |
| ! | CAAATCGCGTAGGAAGGTGT+TGG | + | Chr5:93695259-93695278 | MsG0580029205.01.T01:CDS | 50.0% |
| ! | CGCGAAGGTGGTTCATGTTT+TGG | - | Chr5:93696294-93696313 | None:intergenic | 50.0% |
| ! | CTTCATTGTGCTGTTGCTGG+TGG | + | Chr5:93695116-93695135 | MsG0580029205.01.T01:CDS | 50.0% |
| ! | GCTCTTCATTGTGCTGTTGC+TGG | + | Chr5:93695113-93695132 | MsG0580029205.01.T01:CDS | 50.0% |
| ! | GGAGAGTGCATCTGTTGTGT+GGG | - | Chr5:93696235-93696254 | None:intergenic | 50.0% |
| ! | TGAAGGCATAGCTGAACCAG+TGG | - | Chr5:93695756-93695775 | None:intergenic | 50.0% |
| ! | TGGAGAGTGCATCTGTTGTG+TGG | - | Chr5:93696236-93696255 | None:intergenic | 50.0% |
| !! | AGCCTTGTTCGGTATTGTGC+GGG | - | Chr5:93695653-93695672 | None:intergenic | 50.0% |
| !! | CGTCCTTGCAAAGCCTTGTT+CGG | - | Chr5:93695664-93695683 | None:intergenic | 50.0% |
| !! | TGTGGGTGTTGATGGTTGCA+TGG | - | Chr5:93696218-93696237 | None:intergenic | 50.0% |
| !!! | TGGTTCTGAGTTTTCGCTCG+AGG | + | Chr5:93695136-93695155 | MsG0580029205.01.T01:CDS | 50.0% |
| AACACCACCCATGTCTCCCT+TGG | + | Chr5:93695865-93695884 | MsG0580029205.01.T01:CDS | 55.0% | |
| ACCCCAATCGAGTTTCCCAG+TGG | - | Chr5:93696551-93696570 | None:intergenic | 55.0% | |
| ACGACCCCTTGCGAAACTCT+GGG | - | Chr5:93695574-93695593 | None:intergenic | 55.0% | |
| AGGCATAGCTGAACCAGTGG+AGG | - | Chr5:93695753-93695772 | None:intergenic | 55.0% | |
| AGGCTTTGCAAGGACGAGAC+TGG | + | Chr5:93695668-93695687 | MsG0580029205.01.T01:CDS | 55.0% | |
| ATACACAGGGCGCAGCTCTT+CGG | - | Chr5:93695729-93695748 | None:intergenic | 55.0% | |
| ATGCAAGGAGGAGAGACCCA+AGG | + | Chr5:93695522-93695541 | MsG0580029205.01.T01:CDS | 55.0% | |
| CATCACTGCAGCTGCTACTG+CGG | - | Chr5:93696389-93696408 | None:intergenic | 55.0% | |
| CCAATCGAGTTTCCCAGTGG+GGG | - | Chr5:93696548-93696567 | None:intergenic | 55.0% | |
| CCCAATCGAGTTTCCCAGTG+GGG | - | Chr5:93696549-93696568 | None:intergenic | 55.0% | |
| CCCACTGGGAAACTCGATTG+GGG | + | Chr5:93696547-93696566 | MsG0580029205.01.T01:CDS | 55.0% | |
| CCCCAATCGAGTTTCCCAGT+GGG | - | Chr5:93696550-93696569 | None:intergenic | 55.0% | |
| CCCCACTGGGAAACTCGATT+GGG | + | Chr5:93696546-93696565 | MsG0580029205.01.T01:CDS | 55.0% | |
| CTCCTCCTTGCATTCTCACC+TGG | - | Chr5:93695515-93695534 | None:intergenic | 55.0% | |
| CTGCAGCTGCCGCATATTCT+CGG | - | Chr5:93696737-93696756 | None:intergenic | 55.0% | |
| GAACCTGCCAAGGGAGACAT+GGG | - | Chr5:93695875-93695894 | None:intergenic | 55.0% | |
| GATGGTGAGTTGCAGCACCA+CGG | - | Chr5:93696462-93696481 | None:intergenic | 55.0% | |
| GCACTCTTCAAACGGCTACC+TGG | - | Chr5:93695965-93695984 | None:intergenic | 55.0% | |
| GCTGGCGCAATCAGATCAAC+CGG | - | Chr5:93695224-93695243 | None:intergenic | 55.0% | |
| GCTGTTACGGAAAGATGGGG+AGG | - | Chr5:93696101-93696120 | None:intergenic | 55.0% | |
| GGAACCCCAATCTGAAAGGC+CGG | - | Chr5:93696527-93696546 | None:intergenic | 55.0% | |
| GGCAGGGAACACAGCTGTAA+GGG | - | Chr5:93695553-93695572 | None:intergenic | 55.0% | |
| GGGAGATGATGAACCTGCCA+AGG | - | Chr5:93695885-93695904 | None:intergenic | 55.0% | |
| GTCGTCCGGCCTTTCAGATT+GGG | + | Chr5:93696519-93696538 | MsG0580029205.01.T01:CDS | 55.0% | |
| GTGACGAGCTGAACAAGCTG+AGG | + | Chr5:93696578-93696597 | MsG0580029205.01.T01:CDS | 55.0% | |
| GTGAGGAAGCCCTCACCATA+TGG | + | Chr5:93696349-93696368 | MsG0580029205.01.T01:CDS | 55.0% | |
| TACATCTGCTCCACCCATGG+TGG | - | Chr5:93696787-93696806 | None:intergenic | 55.0% | |
| TATGGTGAGGGCTTCCTCAC+TGG | - | Chr5:93696349-93696368 | None:intergenic | 55.0% | |
| TCGAGACGTGCTTCCACCAT+GGG | + | Chr5:93696771-93696790 | MsG0580029205.01.T01:CDS | 55.0% | |
| TCGTCCGGCCTTTCAGATTG+GGG | + | Chr5:93696520-93696539 | MsG0580029205.01.T01:CDS | 55.0% | |
| TGAACCTGCCAAGGGAGACA+TGG | - | Chr5:93695876-93695895 | None:intergenic | 55.0% | |
| TGGCGCATCTGCATTGCACT+TGG | - | Chr5:93696256-93696275 | None:intergenic | 55.0% | |
| TGGGGGAACCCCAATCTGAA+AGG | - | Chr5:93696531-93696550 | None:intergenic | 55.0% | |
| TGTCGTCCGGCCTTTCAGAT+TGG | + | Chr5:93696518-93696537 | MsG0580029205.01.T01:CDS | 55.0% | |
| ! | GAACCAGTGGAGGCATACAC+AGG | - | Chr5:93695743-93695762 | None:intergenic | 55.0% |
| ! | GGTGCTGCAACTCACCATCT+TGG | + | Chr5:93696463-93696482 | MsG0580029205.01.T01:CDS | 55.0% |
| ! | TTGGCTGCGCTGCTTTGCAA+AGG | - | Chr5:93696428-93696447 | None:intergenic | 55.0% |
| ACCCTGCAGGAAGGGTTGGA+AGG | - | Chr5:93696499-93696518 | None:intergenic | 60.0% | |
| AGACGTGCTTCCACCATGGG+TGG | + | Chr5:93696774-93696793 | MsG0580029205.01.T01:CDS | 60.0% | |
| CAAGGGGTCGTGCCAGAAAG+GGG | + | Chr5:93695583-93695602 | MsG0580029205.01.T01:CDS | 60.0% | |
| CACGACCCCTTGCGAAACTC+TGG | - | Chr5:93695575-93695594 | None:intergenic | 60.0% | |
| CAGATTGGGGTTCCCCCACT+GGG | + | Chr5:93696533-93696552 | MsG0580029205.01.T01:CDS | 60.0% | |
| CCCCCACTGGGAAACTCGAT+TGG | + | Chr5:93696545-93696564 | MsG0580029205.01.T01:CDS | 60.0% | |
| CCCTGCCCAGAGTTTCGCAA+GGG | + | Chr5:93695566-93695585 | MsG0580029205.01.T01:CDS | 60.0% | |
| CCCTTGCGAAACTCTGGGCA+GGG | - | Chr5:93695569-93695588 | None:intergenic | 60.0% | |
| CCTGCCCAGAGTTTCGCAAG+GGG | + | Chr5:93695567-93695586 | MsG0580029205.01.T01:CDS | 60.0% | |
| CTACCTGGGAGCTGCAACGA+TGG | - | Chr5:93695950-93695969 | None:intergenic | 60.0% | |
| CTGCAGGAAGGGTTGGAAGG+CGG | - | Chr5:93696496-93696515 | None:intergenic | 60.0% | |
| GCAAGGGGTCGTGCCAGAAA+GGG | + | Chr5:93695582-93695601 | MsG0580029205.01.T01:CDS | 60.0% | |
| GCCTTCCAACCCTTCCTGCA+GGG | + | Chr5:93696495-93696514 | MsG0580029205.01.T01:CDS | 60.0% | |
| GGCTTCCTCACTGGAGAGGA+AGG | - | Chr5:93696340-93696359 | None:intergenic | 60.0% | |
| GGGCAGGGAACACAGCTGTA+AGG | - | Chr5:93695554-93695573 | None:intergenic | 60.0% | |
| GTCGAGACGTGCTTCCACCA+TGG | + | Chr5:93696770-93696789 | MsG0580029205.01.T01:CDS | 60.0% | |
| TACACAGGGCGCAGCTCTTC+GGG | - | Chr5:93695728-93695747 | None:intergenic | 60.0% | |
| TCAGATTGGGGTTCCCCCAC+TGG | + | Chr5:93696532-93696551 | MsG0580029205.01.T01:CDS | 60.0% | |
| TCCCTGCCCAGAGTTTCGCA+AGG | + | Chr5:93695565-93695584 | MsG0580029205.01.T01:CDS | 60.0% | |
| TGAGGGCTTCCTCACTGGAG+AGG | - | Chr5:93696344-93696363 | None:intergenic | 60.0% | |
| TGCTGCTGCTGTTGACGACG+AGG | - | Chr5:93696040-93696059 | None:intergenic | 60.0% | |
| !! | AAGGAGCGTCCATCTCCCCT+TGG | - | Chr5:93695322-93695341 | None:intergenic | 60.0% |
| !! | GCTGCAACGATGGTGGAGTG+AGG | - | Chr5:93695940-93695959 | None:intergenic | 60.0% |
| !! | TGGGATGCAGTTGGTGCTGC+TGG | - | Chr5:93696637-93696656 | None:intergenic | 60.0% |
| CCACCATCGTTGCAGCTCCC+AGG | + | Chr5:93695944-93695963 | MsG0580029205.01.T01:CDS | 65.0% | |
| CCACCCATGTCTCCCTTGGC+AGG | + | Chr5:93695869-93695888 | MsG0580029205.01.T01:CDS | 65.0% | |
| CCCCTTGCGAAACTCTGGGC+AGG | - | Chr5:93695570-93695589 | None:intergenic | 65.0% | |
| CCTGCCAAGGGAGACATGGG+TGG | - | Chr5:93695872-93695891 | None:intergenic | 65.0% | |
| CCTGGGAGCTGCAACGATGG+TGG | - | Chr5:93695947-93695966 | None:intergenic | 65.0% | |
| CGACACCCTGCAGGAAGGGT+TGG | - | Chr5:93696503-93696522 | None:intergenic | 65.0% | |
| CGCAAGGGGTCGTGCCAGAA+AGG | + | Chr5:93695581-93695600 | MsG0580029205.01.T01:CDS | 65.0% | |
| CGCCCTGTGTATGCCTCCAC+TGG | + | Chr5:93695737-93695756 | MsG0580029205.01.T01:CDS | 65.0% | |
| CGCCTTCCAACCCTTCCTGC+AGG | + | Chr5:93696494-93696513 | MsG0580029205.01.T01:CDS | 65.0% | |
| CGGACGACACCCTGCAGGAA+GGG | - | Chr5:93696507-93696526 | None:intergenic | 65.0% | |
| !! | CCTTCCTGCAGGGTGTCGTC+CGG | + | Chr5:93696505-93696524 | MsG0580029205.01.T01:CDS | 65.0% |
| AAGGCCGGACGACACCCTGC+AGG | - | Chr5:93696512-93696531 | None:intergenic | 70.0% | |
| CCGGACGACACCCTGCAGGA+AGG | - | Chr5:93696508-93696527 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr5 | gene | 93694783 | 93696834 | 93694783 | ID=MsG0580029205.01;Name=MsG0580029205.01 |
| Chr5 | mRNA | 93694783 | 93696834 | 93694783 | ID=MsG0580029205.01.T01;Parent=MsG0580029205.01;Name=MsG0580029205.01.T01;_AED=0.18;_eAED=0.18;_QI=0|-1|0|1|-1|1|1|0|683 |
| Chr5 | exon | 93694783 | 93696834 | 93694783 | ID=MsG0580029205.01.T01:exon:49678;Parent=MsG0580029205.01.T01 |
| Chr5 | CDS | 93694783 | 93696834 | 93694783 | ID=MsG0580029205.01.T01:cds;Parent=MsG0580029205.01.T01 |
| Gene Sequence |
| Protein sequence |
