AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280008067.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280008067.01.T01 MTR_2g437770 95.640 344 14 1 1 344 1 343 0.0 665
MsG0280008067.01.T01 MTR_4g133800 63.699 292 106 0 51 342 42 333 2.22e-143 409
MsG0280008067.01.T01 MTR_2g029750 45.875 303 153 5 50 342 29 330 8.20e-83 255
MsG0280008067.01.T01 MTR_5g017850 43.189 301 162 3 50 342 27 326 5.95e-82 252
MsG0280008067.01.T01 MTR_5g017860 43.522 301 161 3 50 342 27 326 6.84e-82 252
MsG0280008067.01.T01 MTR_5g021060 45.130 308 159 6 44 342 24 330 9.70e-82 252
MsG0280008067.01.T01 MTR_2g029740 44.816 299 154 5 54 342 33 330 4.53e-81 251
MsG0280008067.01.T01 MTR_2g028980 44.000 300 157 6 53 342 32 330 1.55e-79 247
MsG0280008067.01.T01 MTR_8g076820 44.667 300 156 6 54 344 34 332 9.75e-79 244
MsG0280008067.01.T01 MTR_2g029815 39.080 348 182 6 6 343 4 331 1.86e-78 244
MsG0280008067.01.T01 MTR_4g087965 42.857 308 164 4 44 339 36 343 6.75e-78 243
MsG0280008067.01.T01 MTR_2g088770 43.854 301 160 6 50 342 26 325 1.02e-77 241
MsG0280008067.01.T01 MTR_2g029830 42.997 307 164 5 47 343 25 330 1.14e-77 242
MsG0280008067.01.T01 MTR_6g027440 43.624 298 159 5 50 342 21 314 1.60e-77 241
MsG0280008067.01.T01 MTR_2g029560 42.434 304 164 5 50 343 24 326 1.61e-77 241
MsG0280008067.01.T01 MTR_4g114210 43.522 301 161 3 50 342 21 320 8.24e-77 239
MsG0280008067.01.T01 MTR_2g029730 43.092 304 162 5 50 343 25 327 1.38e-76 239
MsG0280008067.01.T01 MTR_1g086320 43.279 305 160 6 50 342 30 333 1.47e-76 239
MsG0280008067.01.T01 MTR_2g029800 42.020 307 167 5 47 343 26 331 1.64e-76 239
MsG0280008067.01.T01 MTR_3g092990 42.434 304 163 6 50 343 26 327 1.52e-75 236
MsG0280008067.01.T01 MTR_2g008710 41.414 297 166 3 53 342 30 325 2.16e-75 235
MsG0280008067.01.T01 MTR_1g054205 40.864 301 166 5 54 343 28 327 2.60e-75 235
MsG0280008067.01.T01 MTR_1g086490 41.667 312 162 6 50 342 30 340 2.95e-75 236
MsG0280008067.01.T01 MTR_4g046713 43.000 300 158 6 53 342 30 326 3.54e-75 235
MsG0280008067.01.T01 MTR_2g029820 42.667 300 161 5 54 343 33 331 6.05e-75 235
MsG0280008067.01.T01 MTR_7g107520 43.919 296 155 6 54 342 29 320 1.31e-74 233
MsG0280008067.01.T01 MTR_1g077000 40.878 296 165 3 50 342 39 327 1.62e-74 233
MsG0280008067.01.T01 MTR_3g466200 41.776 304 158 5 50 342 25 320 1.96e-74 233
MsG0280008067.01.T01 MTR_2g029850 41.456 316 170 6 38 343 21 331 4.21e-74 233
MsG0280008067.01.T01 MTR_1g038680 42.715 302 160 6 53 342 32 332 1.27e-73 231
MsG0280008067.01.T01 MTR_3g072190 42.222 315 166 7 36 342 12 318 1.58e-73 230
MsG0280008067.01.T01 MTR_2g084090 39.937 318 174 6 34 342 9 318 1.71e-73 230
MsG0280008067.01.T01 MTR_8g075100 40.461 304 164 4 48 342 24 319 3.44e-73 229
MsG0280008067.01.T01 MTR_7g093370 40.328 305 170 6 50 343 69 372 5.53e-73 231
MsG0280008067.01.T01 MTR_4g031140 41.472 299 163 5 53 343 31 325 1.97e-72 228
MsG0280008067.01.T01 MTR_5g074970 40.000 305 163 5 50 342 30 326 4.22e-72 227
MsG0280008067.01.T01 MTR_1g025980 40.984 305 168 4 44 341 18 317 8.79e-72 226
MsG0280008067.01.T01 MTR_7g086820 39.867 301 165 6 50 342 20 312 9.44e-72 226
MsG0280008067.01.T01 MTR_2g029860 41.333 300 165 5 54 343 33 331 1.34e-71 226
MsG0280008067.01.T01 MTR_1g022970 42.997 307 160 8 50 342 42 347 2.64e-71 226
MsG0280008067.01.T01 MTR_5g014100 44.805 308 155 7 49 342 25 331 5.89e-71 224
MsG0280008067.01.T01 MTR_4g125940 40.789 304 169 5 50 343 28 330 9.03e-71 224
MsG0280008067.01.T01 MTR_4g083710 39.286 308 168 6 47 342 24 324 9.09e-71 223
MsG0280008067.01.T01 MTR_2g084080 39.731 297 163 5 54 342 29 317 1.29e-70 223
MsG0280008067.01.T01 MTR_2g084110 38.291 316 179 5 35 342 10 317 1.40e-70 223
MsG0280008067.01.T01 MTR_4g029200 38.040 347 191 6 4 342 8 338 1.64e-70 223
MsG0280008067.01.T01 MTR_4g029190 39.244 344 183 6 9 342 13 340 3.18e-70 223
MsG0280008067.01.T01 MTR_3g094650 39.365 315 173 5 34 338 12 318 7.57e-70 221
MsG0280008067.01.T01 MTR_5g022870 40.397 302 163 4 50 342 23 316 2.41e-69 219
MsG0280008067.01.T01 MTR_7g026990 40.741 297 161 5 54 343 35 323 2.44e-69 220
MsG0280008067.01.T01 MTR_1g115900 39.803 304 165 6 50 343 27 322 4.71e-69 219
MsG0280008067.01.T01 MTR_4g074995 38.762 307 158 6 47 342 21 308 6.24e-69 218
MsG0280008067.01.T01 MTR_2g029910 40.333 300 167 5 54 342 34 332 7.60e-69 219
MsG0280008067.01.T01 MTR_4g029170 42.904 303 155 7 50 342 27 321 1.47e-68 218
MsG0280008067.01.T01 MTR_8g062780 39.667 300 168 6 54 342 27 324 1.60e-68 218
MsG0280008067.01.T01 MTR_4g030890 40.268 298 166 6 53 342 103 396 2.24e-68 220
MsG0280008067.01.T01 MTR_4g122640 37.861 346 194 8 6 342 3 336 4.39e-68 217
MsG0280008067.01.T01 MTR_3g094670 41.137 299 158 5 50 338 28 318 5.64e-68 216
MsG0280008067.01.T01 MTR_4g127670 37.710 297 176 5 50 338 24 319 5.68e-68 216
MsG0280008067.01.T01 MTR_7g072510 37.874 301 171 5 50 342 20 312 6.33e-68 216
MsG0280008067.01.T01 MTR_7g086870 39.404 302 164 6 50 343 22 312 8.57e-68 215
MsG0280008067.01.T01 MTR_2g084000 39.735 302 165 7 50 342 26 319 9.97e-68 215
MsG0280008067.01.T01 MTR_1g101830 39.262 298 166 4 54 342 31 322 2.84e-67 214
MsG0280008067.01.T01 MTR_2g084010 39.130 299 163 7 54 342 29 318 3.03e-67 214
MsG0280008067.01.T01 MTR_2g040000 40.532 301 167 5 54 343 33 332 5.07e-67 214
MsG0280008067.01.T01 MTR_5g083860 40.924 303 161 6 50 342 31 325 5.14e-67 214
MsG0280008067.01.T01 MTR_1g066380 39.803 304 167 5 50 343 27 324 6.58e-67 214
MsG0280008067.01.T01 MTR_7g072480 38.538 301 169 5 50 342 24 316 7.46e-67 213
MsG0280008067.01.T01 MTR_1g090760 37.171 304 179 5 50 342 28 330 4.66e-66 212
MsG0280008067.01.T01 MTR_1g066710 39.474 304 168 5 50 343 27 324 7.41e-66 211
MsG0280008067.01.T01 MTR_6g043280 37.458 299 174 4 50 342 41 332 1.07e-65 211
MsG0280008067.01.T01 MTR_5g016010 37.954 303 176 6 50 341 27 328 1.68e-65 210
MsG0280008067.01.T01 MTR_2g084020 36.909 317 183 6 35 342 10 318 3.69e-65 209
MsG0280008067.01.T01 MTR_4g125940 42.336 274 147 5 80 343 3 275 7.29e-65 207
MsG0280008067.01.T01 MTR_6g043240 38.591 298 172 4 50 343 42 332 1.01e-64 209
MsG0280008067.01.T01 MTR_0155s0040 37.374 297 174 5 50 342 27 315 1.14e-64 207
MsG0280008067.01.T01 MTR_3g092990 40.132 304 159 7 50 343 26 316 2.15e-64 207
MsG0280008067.01.T01 MTR_3g466180 41.860 301 159 5 50 342 31 323 2.60e-64 207
MsG0280008067.01.T01 MTR_1g009750 36.928 306 176 7 50 342 27 328 7.00e-64 206
MsG0280008067.01.T01 MTR_1g066640 38.487 304 171 5 50 343 27 324 8.23e-64 206
MsG0280008067.01.T01 MTR_0286s0010 37.705 305 174 8 50 342 34 334 1.78e-63 205
MsG0280008067.01.T01 MTR_6g008075 37.705 305 174 8 50 342 34 334 1.78e-63 205
MsG0280008067.01.T01 MTR_5g049280 38.889 306 173 6 50 342 33 337 2.01e-63 205
MsG0280008067.01.T01 MTR_4g074990 38.065 310 159 8 44 342 18 305 2.73e-63 204
MsG0280008067.01.T01 MTR_6g043460 38.176 296 169 5 50 338 36 324 3.05e-63 205
MsG0280008067.01.T01 MTR_2g008160 40.066 302 170 5 50 342 24 323 5.99e-63 203
MsG0280008067.01.T01 MTR_3g094630 40.594 303 162 6 50 342 28 322 9.14e-63 203
MsG0280008067.01.T01 MTR_4g029180 41.472 299 157 7 54 342 31 321 1.17e-62 202
MsG0280008067.01.T01 MTR_2g067440 36.585 328 171 6 50 341 60 386 1.53e-62 204
MsG0280008067.01.T01 MTR_2g029830 42.471 259 138 5 95 343 5 262 2.25e-62 201
MsG0280008067.01.T01 MTR_2g078610 36.170 329 170 6 50 339 76 403 6.43e-62 203
MsG0280008067.01.T01 MTR_2g077990 36.280 328 169 6 50 338 76 402 2.63e-61 201
MsG0280008067.01.T01 MTR_5g074710 40.984 305 160 9 50 342 25 321 1.14e-60 197
MsG0280008067.01.T01 MTR_3g467600 41.060 302 157 10 54 342 31 324 2.05e-60 197
MsG0280008067.01.T01 MTR_5g033470 37.134 307 177 6 50 342 73 377 5.99e-60 197
MsG0280008067.01.T01 MTR_4g132110 36.928 306 177 5 47 342 29 328 1.08e-59 195
MsG0280008067.01.T01 MTR_1g066680 39.145 304 168 7 50 343 27 323 5.51e-59 193
MsG0280008067.01.T01 MTR_5g074760 40.328 305 162 9 50 342 25 321 1.21e-58 192
MsG0280008067.01.T01 MTR_4g074980 35.873 315 169 8 33 342 8 294 1.39e-58 191
MsG0280008067.01.T01 MTR_2g078280 36.278 317 163 5 50 327 76 392 3.47e-58 193
MsG0280008067.01.T01 MTR_4g132490 36.721 305 179 6 48 342 27 327 4.83e-58 191
MsG0280008067.01.T01 MTR_4g095450 35.333 300 177 6 50 338 27 320 9.26e-58 190
MsG0280008067.01.T01 MTR_4g132110 36.334 311 177 6 47 342 29 333 1.35e-57 190
MsG0280008067.01.T01 MTR_2g099175 38.944 303 172 5 50 342 36 335 2.00e-57 189
MsG0280008067.01.T01 MTR_5g074740 40.000 305 163 9 50 342 25 321 3.31e-57 188
MsG0280008067.01.T01 MTR_3g072190 42.023 257 133 7 94 342 3 251 1.91e-56 184
MsG0280008067.01.T01 MTR_2g008730 36.700 297 156 4 53 342 30 301 2.85e-56 185
MsG0280008067.01.T01 MTR_5g074860 38.033 305 169 8 49 341 28 324 1.75e-55 184
MsG0280008067.01.T01 MTR_7g029030 36.027 297 177 5 54 342 29 320 4.13e-55 183
MsG0280008067.01.T01 MTR_4g074980 37.698 252 140 5 33 273 8 253 5.49e-55 181
MsG0280008067.01.T01 MTR_1g066380 39.080 261 143 5 93 343 2 256 7.29e-54 177
MsG0280008067.01.T01 MTR_1g009750 33.882 304 171 8 50 342 27 311 1.33e-53 179
MsG0280008067.01.T01 MTR_2g067450 34.304 309 176 8 50 341 11 309 2.40e-51 173
MsG0280008067.01.T01 MTR_3g105790 36.789 299 182 5 50 342 25 322 5.95e-49 167
MsG0280008067.01.T01 MTR_0147s0010 33.438 317 176 6 49 341 76 381 1.53e-48 167
MsG0280008067.01.T01 MTR_2g008160 36.755 302 145 7 50 342 24 288 2.89e-48 164
MsG0280008067.01.T01 MTR_2g008160 48.193 166 85 1 50 214 24 189 3.62e-45 154
MsG0280008067.01.T01 MTR_2g029880 42.021 188 98 4 158 342 9 188 4.21e-39 138
MsG0280008067.01.T01 MTR_5g074860 33.663 303 146 10 49 341 28 285 5.29e-37 135
MsG0280008067.01.T01 MTR_5g074700 37.607 234 118 9 116 342 2 214 3.27e-34 125
MsG0280008067.01.T01 MTR_3g105790 36.290 248 149 6 102 342 1 246 4.79e-32 120
MsG0280008067.01.T01 MTR_3g072260 47.154 123 61 1 36 154 12 134 8.78e-32 116
MsG0280008067.01.T01 MTR_7g072490 33.621 232 89 6 96 321 2 174 1.44e-28 110
MsG0280008067.01.T01 MTR_2g078560 32.143 224 116 5 151 339 95 317 1.38e-27 110
MsG0280008067.01.T01 MTR_3g072210 38.144 194 106 8 155 342 53 238 2.85e-26 105
MsG0280008067.01.T01 MTR_7g086790 35.625 160 80 5 97 252 17 157 5.27e-22 92.4
MsG0280008067.01.T01 MTR_5g058120 34.375 160 92 3 181 338 7 155 1.65e-20 89.7
MsG0280008067.01.T01 MTR_4g114220 49.412 85 37 1 69 153 22 100 3.62e-20 85.9
MsG0280008067.01.T01 MTR_1g089005 38.983 118 63 2 49 157 14 131 1.85e-19 84.3
MsG0280008067.01.T01 MTR_6g048160 53.030 66 31 0 89 154 22 87 2.52e-19 82.0
MsG0280008067.01.T01 MTR_7g086810 36.522 115 51 1 50 164 6 98 2.46e-16 77.8
MsG0280008067.01.T01 MTR_7g086785 34.058 138 82 3 95 228 3 135 4.81e-16 74.3
MsG0280008067.01.T01 MTR_1g098320 45.570 79 42 1 264 342 47 124 1.30e-15 73.2
MsG0280008067.01.T01 MTR_4g031040 33.846 130 65 4 155 280 24 136 8.77e-15 70.9
MsG0280008067.01.T01 MTR_3g462850 34.965 143 84 4 209 343 9 150 1.23e-12 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280008067.01.T01 AT1G30870 61.000 300 115 2 46 343 47 346 1.11e-133 385
MsG0280008067.01.T01 AT3G03670 42.667 300 164 4 50 342 23 321 3.50e-88 268
MsG0280008067.01.T01 AT5G17820 41.980 293 167 3 50 342 24 313 2.63e-87 265
MsG0280008067.01.T01 AT5G17820 41.980 293 167 3 50 342 77 366 9.06e-86 263
MsG0280008067.01.T01 AT1G49570 45.364 302 153 6 50 340 48 348 4.65e-85 261
MsG0280008067.01.T01 AT4G36430 44.333 300 157 7 53 343 33 331 4.41e-82 253
MsG0280008067.01.T01 AT2G18150 43.144 299 160 6 53 342 39 336 2.14e-81 251
MsG0280008067.01.T01 AT1G05240 42.384 302 165 5 49 342 25 325 8.57e-81 249
MsG0280008067.01.T01 AT1G05250 42.384 302 165 5 49 342 25 325 8.57e-81 249
MsG0280008067.01.T01 AT5G15180 45.485 299 156 5 50 342 32 329 1.51e-80 249
MsG0280008067.01.T01 AT2G41480 43.894 303 161 3 48 342 27 328 1.12e-79 246
MsG0280008067.01.T01 AT5G64120 41.837 294 166 3 52 342 37 328 3.45e-79 245
MsG0280008067.01.T01 AT2G18140 42.675 314 161 7 47 342 23 335 3.78e-79 245
MsG0280008067.01.T01 AT4G11290 44.262 305 155 7 50 342 25 326 4.03e-79 245
MsG0280008067.01.T01 AT2G39040 44.444 306 156 6 50 342 46 350 4.90e-79 246
MsG0280008067.01.T01 AT1G05260 44.040 302 160 6 50 343 26 326 2.65e-78 243
MsG0280008067.01.T01 AT3G01190 45.151 299 155 6 50 342 26 321 5.83e-78 242
MsG0280008067.01.T01 AT2G38390 43.333 300 158 6 54 342 35 333 3.87e-77 241
MsG0280008067.01.T01 AT3G21770 43.771 297 158 6 50 338 29 324 4.43e-77 240
MsG0280008067.01.T01 AT5G66390 43.624 298 158 6 54 342 37 333 4.45e-77 240
MsG0280008067.01.T01 AT4G08770 43.137 306 161 6 50 343 24 328 7.06e-77 240
MsG0280008067.01.T01 AT5G06720 40.000 300 169 5 54 343 36 334 1.58e-75 236
MsG0280008067.01.T01 AT4G08780 42.810 306 162 6 50 343 24 328 2.07e-75 236
MsG0280008067.01.T01 AT3G50990 42.384 302 164 6 50 342 41 341 3.62e-75 235
MsG0280008067.01.T01 AT5G64100 41.497 294 166 5 53 342 40 331 5.23e-75 234
MsG0280008067.01.T01 AT4G16270 43.974 307 158 7 46 342 46 348 1.39e-74 234
MsG0280008067.01.T01 AT5G19880 40.523 306 168 6 50 342 25 329 2.44e-74 233
MsG0280008067.01.T01 AT2G34060 44.371 302 156 5 50 339 42 343 3.90e-74 233
MsG0280008067.01.T01 AT2G38380 43.333 300 158 6 54 342 35 333 5.95e-74 233
MsG0280008067.01.T01 AT5G19890 41.528 301 165 4 50 342 30 327 7.04e-74 231
MsG0280008067.01.T01 AT5G06730 39.333 300 171 6 54 343 37 335 8.43e-74 232
MsG0280008067.01.T01 AT3G49110 41.424 309 168 6 47 343 30 337 4.21e-73 230
MsG0280008067.01.T01 AT3G49120 41.391 302 164 6 54 343 36 336 5.72e-73 230
MsG0280008067.01.T01 AT3G32980 42.715 302 160 7 54 343 35 335 3.62e-72 228
MsG0280008067.01.T01 AT5G05340 39.274 303 166 5 50 342 30 324 4.26e-72 227
MsG0280008067.01.T01 AT4G33420 41.216 296 164 3 50 342 37 325 1.69e-71 225
MsG0280008067.01.T01 AT2G22420 41.414 297 162 6 54 342 27 319 2.90e-71 225
MsG0280008067.01.T01 AT4G33420 41.216 296 164 3 50 342 84 372 9.35e-71 225
MsG0280008067.01.T01 AT5G39580 40.339 295 170 4 52 342 27 319 1.20e-70 223
MsG0280008067.01.T01 AT1G44970 42.475 299 161 6 54 342 49 346 1.47e-70 224
MsG0280008067.01.T01 AT5G42180 36.494 348 179 6 3 341 2 316 1.39e-69 220
MsG0280008067.01.T01 AT1G71695 39.498 319 172 7 39 342 27 339 2.03e-69 221
MsG0280008067.01.T01 AT5G64110 40.203 296 169 4 53 342 37 330 4.20e-69 219
MsG0280008067.01.T01 AT1G68850 40.391 307 168 6 50 342 30 335 5.75e-69 219
MsG0280008067.01.T01 AT5G51890 40.000 300 162 5 54 342 30 322 2.12e-68 217
MsG0280008067.01.T01 AT1G14550 42.295 305 155 8 50 342 26 321 2.38e-67 214
MsG0280008067.01.T01 AT4G30170 36.545 301 181 6 50 342 27 325 2.94e-67 214
MsG0280008067.01.T01 AT2G35380 41.776 304 162 8 53 342 33 335 4.08e-66 212
MsG0280008067.01.T01 AT4G25980 39.735 302 172 4 50 342 26 326 6.10e-66 211
MsG0280008067.01.T01 AT2G18980 37.542 301 178 6 50 342 25 323 1.01e-65 211
MsG0280008067.01.T01 AT5G22410 39.189 296 171 5 50 338 28 321 1.34e-65 210
MsG0280008067.01.T01 AT1G77100 39.604 303 166 7 50 342 24 319 5.15e-65 208
MsG0280008067.01.T01 AT2G24800 41.196 301 167 5 50 342 31 329 6.03e-65 209
MsG0280008067.01.T01 AT4G17690 36.789 299 173 6 54 342 30 322 1.37e-64 207
MsG0280008067.01.T01 AT3G49960 36.184 304 182 5 50 342 27 329 3.71e-64 207
MsG0280008067.01.T01 AT4G26010 37.919 298 170 6 50 342 22 309 5.14e-64 206
MsG0280008067.01.T01 AT4G26010 37.919 298 170 6 50 342 50 337 1.11e-63 206
MsG0280008067.01.T01 AT5G40150 37.954 303 172 6 50 342 32 328 1.27e-63 205
MsG0280008067.01.T01 AT4G31760 39.404 302 170 5 50 342 29 326 2.74e-63 204
MsG0280008067.01.T01 AT5G47000 37.255 306 173 7 49 342 32 330 4.08e-63 204
MsG0280008067.01.T01 AT5G58390 39.189 296 161 5 54 338 25 312 6.80e-63 203
MsG0280008067.01.T01 AT3G28200 37.294 303 173 6 50 342 21 316 8.43e-63 202
MsG0280008067.01.T01 AT5G14130 37.000 300 181 5 50 342 32 330 8.51e-63 203
MsG0280008067.01.T01 AT1G14540 38.742 302 169 7 50 342 21 315 1.15e-62 202
MsG0280008067.01.T01 AT5G14130 37.000 300 181 5 50 342 73 371 6.55e-62 202
MsG0280008067.01.T01 AT5G24070 36.877 301 177 4 54 343 38 336 8.45e-62 201
MsG0280008067.01.T01 AT5G58400 35.435 333 195 6 22 342 1 325 3.49e-61 199
MsG0280008067.01.T01 AT2G43480 34.111 343 203 6 10 342 6 335 1.78e-60 197
MsG0280008067.01.T01 AT2G37130 38.158 304 171 6 50 342 30 327 2.24e-60 197
MsG0280008067.01.T01 AT2G37130 38.079 302 170 6 52 342 1 296 3.76e-60 195
MsG0280008067.01.T01 AT4G37530 34.333 300 185 5 54 342 31 329 3.37e-59 194
MsG0280008067.01.T01 AT5G67400 34.375 320 197 6 34 342 12 329 3.79e-59 194
MsG0280008067.01.T01 AT4G37520 34.539 304 187 6 50 342 27 329 4.00e-59 194
MsG0280008067.01.T01 AT4G37520 34.539 304 184 7 50 342 27 326 3.85e-58 191
MsG0280008067.01.T01 AT4G33870 31.755 359 195 7 23 339 48 398 4.35e-58 193
MsG0280008067.01.T01 AT1G34510 38.255 298 169 6 50 342 22 309 1.21e-57 189
MsG0280008067.01.T01 AT4G21960 36.246 309 181 5 44 342 25 327 5.03e-57 188
MsG0280008067.01.T01 AT1G24110 39.216 306 172 7 50 344 22 324 1.40e-56 187
MsG0280008067.01.T01 AT3G17070 36.482 307 176 7 50 342 38 339 5.78e-56 186
MsG0280008067.01.T01 AT4G37530 34.127 252 155 4 54 294 31 282 5.38e-50 169
MsG0280008067.01.T01 AT2G35380 40.928 237 129 6 116 342 12 247 7.51e-47 159
MsG0280008067.01.T01 AT2G24800 45.679 162 87 1 50 210 31 192 7.29e-42 146
MsG0280008067.01.T01 AT4G25980 45.732 164 88 1 50 212 71 234 1.17e-41 147
MsG0280008067.01.T01 AT5G39580 41.071 168 99 0 52 219 27 194 9.51e-41 143
MsG0280008067.01.T01 AT3G17070 34.483 261 152 7 96 342 21 276 1.00e-38 139

Find 66 sgRNAs with CRISPR-Local

Find 175 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCAAGAAGTTAAGGTATTT+TGG 0.131323 2:-25008341 None:intergenic
CCTCCGATTGTTGCTTCTTT+TGG 0.213392 2:+25006334 MsG0280008067.01.T01:CDS
ACTTCCATGATTGCTCTGTT+AGG 0.266056 2:+25006582 MsG0280008067.01.T01:CDS
TGAAGTTATTGATGATATTA+AGG 0.280197 2:+25007253 MsG0280008067.01.T01:CDS
CCATATTGGTCAGTCCCTTA+TGG 0.281860 2:+25007365 MsG0280008067.01.T01:CDS
GGTGTCATTGATGTTCTTAC+TGG 0.290141 2:+25008581 MsG0280008067.01.T01:CDS
AACATTAGAGGATACAGATT+TGG 0.336587 2:+25006436 MsG0280008067.01.T01:CDS
TATTCAGGGGCACATACTAT+TGG 0.363846 2:+25008242 MsG0280008067.01.T01:intron
TCTTGCAAAGAAAATGTAGA+TGG 0.363928 2:+25008357 MsG0280008067.01.T01:CDS
TTGGATAATCTCTTATCCTT+TGG 0.369990 2:+25006455 MsG0280008067.01.T01:CDS
TCTACAAGTCCCAACATTAG+AGG 0.388107 2:+25006424 MsG0280008067.01.T01:CDS
TTTCCATCTTTCCTCCCATA+AGG 0.389130 2:-25007380 None:intergenic
GCTGTTTCAATGTCAAAGTT+TGG 0.390316 2:+25008560 MsG0280008067.01.T01:CDS
TTCCATCTTTCCTCCCATAA+GGG 0.402901 2:-25007379 None:intergenic
TTTGGATCTAATGATGGGTC+TGG 0.404975 2:-25008323 None:intergenic
CTTGACTTAGTTGTTCTCTC+AGG 0.406767 2:+25007497 MsG0280008067.01.T01:CDS
CATATTGGTCAGTCCCTTAT+GGG 0.409021 2:+25007366 MsG0280008067.01.T01:CDS
AGCATTGACAAAATTGCAAT+TGG 0.413153 2:-25008627 None:intergenic
TATTGACAAAGAAGCTGAAA+TGG 0.416623 2:+25007409 MsG0280008067.01.T01:CDS
GTCAAGGACAGTCAAGCCTT+TGG 0.419581 2:-25007480 None:intergenic
ATATTCTTACAACTGCTTCA+AGG 0.425738 2:+25007318 MsG0280008067.01.T01:CDS
GAAACAAGTGGAGAAGTTCT+TGG 0.427170 2:-25008497 None:intergenic
CTTCCATGATTGCTCTGTTA+GGG 0.430268 2:+25006583 MsG0280008067.01.T01:CDS
CCATAAGGGACTGACCAATA+TGG 0.445922 2:-25007365 None:intergenic
TTCTCCACTTGTTTCAGCAT+TGG 0.449242 2:+25008505 MsG0280008067.01.T01:CDS
GGTCTGGTTTGCCTGTTCCT+TGG 0.453569 2:-25008307 None:intergenic
CCACCCTAACAGAGCAATCA+TGG 0.454699 2:-25006586 None:intergenic
CTTGTGGCTCTATTCAATAC+AGG 0.457006 2:+25008273 MsG0280008067.01.T01:CDS
AGGGATGCCACTGTTGAGTT+GGG 0.457543 2:+25007338 MsG0280008067.01.T01:CDS
GTCCCTTATGGGAGGAAAGA+TGG 0.458270 2:+25007377 MsG0280008067.01.T01:CDS
AAATCTGTATCCTCTAATGT+TGG 0.458659 2:-25006434 None:intergenic
TTTGACTTTGCTATGCAAGA+TGG 0.467791 2:-25006510 None:intergenic
TGCATAGCAAAGTCAAAGAA+TGG 0.476889 2:+25006516 MsG0280008067.01.T01:CDS
AAGGGATGCCACTGTTGAGT+TGG 0.488094 2:+25007337 MsG0280008067.01.T01:CDS
AATCTGTATCCTCTAATGTT+GGG 0.489759 2:-25006433 None:intergenic
TGCAAGATGGATTCAAATTG+AGG 0.491467 2:-25006497 None:intergenic
TTGAGTTGGGTGGACCATAT+TGG 0.502726 2:+25007351 MsG0280008067.01.T01:CDS
AATCATGGAAGTGCAACCTT+AGG 0.505171 2:-25006571 None:intergenic
TTATACAACTACCAAGGAAC+AGG 0.505330 2:+25008296 MsG0280008067.01.T01:CDS
TATTCTTACAACTGCTTCAA+GGG 0.505713 2:+25007319 MsG0280008067.01.T01:CDS
CTTTAGCAGCTAGTCTCCTA+AGG 0.506408 2:+25006555 MsG0280008067.01.T01:CDS
AGAAGCTGAAATGGTACCAA+TGG 0.515929 2:+25007418 MsG0280008067.01.T01:CDS
GGATTGAAAATATTCAATCA+AGG 0.521519 2:-25007459 None:intergenic
GAGATGATGAAGGAGAAATC+AGG 0.533880 2:+25008603 MsG0280008067.01.T01:CDS
GAAGCTGAAATGGTACCAAT+GGG 0.535263 2:+25007419 MsG0280008067.01.T01:CDS
GAACCAAAAGAAGCAACAAT+CGG 0.537109 2:-25006337 None:intergenic
GCAAGATGGATTCAAATTGA+GGG 0.538287 2:-25006496 None:intergenic
ACCTTATGATGAAAACTATG+AGG 0.539825 2:+25006388 MsG0280008067.01.T01:CDS
AGTCAAAGAATGGATTAAGA+AGG 0.547241 2:+25006526 MsG0280008067.01.T01:CDS
TAGATGGGCCTCAGAATATG+TGG 0.552895 2:+25008373 MsG0280008067.01.T01:CDS
TCAAGGAAGTAATGTTCTCA+TGG 0.568582 2:-25007442 None:intergenic
GTAATGTTCTCATGGCCCAT+TGG 0.578787 2:-25007434 None:intergenic
CTTGCAAAGAAAATGTAGAT+GGG 0.583573 2:+25008358 MsG0280008067.01.T01:CDS
CAAGTAAGCAAGACATTGAG+AGG 0.601262 2:+25007227 MsG0280008067.01.T01:CDS
TGAATCATGAAGGAAGTGAA+AGG 0.602756 2:+25007198 MsG0280008067.01.T01:CDS
GTTCTTACTGGAGATGATGA+AGG 0.609230 2:+25008593 MsG0280008067.01.T01:CDS
CAGGGGCACATACTATTGGA+AGG 0.617965 2:+25008246 MsG0280008067.01.T01:intron
CTGAGAGAACAACTAAGTCA+AGG 0.638471 2:-25007496 None:intergenic
ATCAAGATCCACATATTCTG+AGG 0.649365 2:-25008381 None:intergenic
ACTATTGGAAGGACTACTTG+TGG 0.665121 2:+25008257 MsG0280008067.01.T01:CDS
CCAAAAGAAGCAACAATCGG+AGG 0.665472 2:-25006334 None:intergenic
GATGCCACTGTTGAGTTGGG+TGG 0.668142 2:+25007341 MsG0280008067.01.T01:CDS
GTGGCCAATGCTGAAACAAG+TGG 0.669223 2:-25008509 None:intergenic
ATTGGTCAGTCCCTTATGGG+AGG 0.681509 2:+25007369 MsG0280008067.01.T01:CDS
TACAGGTTATACAACTACCA+AGG 0.683064 2:+25008290 MsG0280008067.01.T01:CDS
TGGTCCACCCAACTCAACAG+TGG 0.695362 2:-25007345 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATTAATATAGAAAACAAT+TGG - Chr2:25008225-25008244 None:intergenic 10.0%
!! TATATAGTAAAAAATGAATA+TGG - Chr2:25007124-25007143 None:intergenic 10.0%
!! TTAAAAGTCAAAAAAAATTT+CGG + Chr2:25007837-25007856 MsG0280008067.01.T01:intron 10.0%
!!! AAAACTGAATTTTTTTTTTA+AGG + Chr2:25007923-25007942 MsG0280008067.01.T01:intron 10.0%
!!! AATTAAAACTGAAAAATTTT+CGG + Chr2:25007874-25007893 MsG0280008067.01.T01:intron 10.0%
!!! ATTGTTAATCATTTAAAATT+TGG + Chr2:25007675-25007694 MsG0280008067.01.T01:intron 10.0%
!!! ATTGTTAATCATTTAAAATT+TGG - Chr2:25007694-25007675 None:intergenic 10.0%
!!! ATTTGATTTATATATTTGAA+AGG + Chr2:25007567-25007586 MsG0280008067.01.T01:intron 10.0%
!! AAAAATCGTAAAAAAAATTC+GGG + Chr2:25007898-25007917 MsG0280008067.01.T01:intron 15.0%
!! ACTCTATTAATATTTCAAAT+AGG - Chr2:25008145-25008164 None:intergenic 15.0%
!! ATAAATCTCAAAAAGAAAAT+GGG + Chr2:25008440-25008459 MsG0280008067.01.T01:CDS 15.0%
!! GAAAAATCGTAAAAAAAATT+CGG + Chr2:25007897-25007916 MsG0280008067.01.T01:intron 15.0%
!!! ATATACTTATTTGAACTTTT+TGG + Chr2:25007139-25007158 MsG0280008067.01.T01:intron 15.0%
!!! ATTAAAACTGAAAAATTTTC+GGG + Chr2:25007875-25007894 MsG0280008067.01.T01:intron 15.0%
!!! GTTTTCTATATTAATATTCA+GGG + Chr2:25008228-25008247 MsG0280008067.01.T01:intron 15.0%
!!! TGTTTTCTATATTAATATTC+AGG + Chr2:25008227-25008246 MsG0280008067.01.T01:intron 15.0%
!!! TTTTCTATATTAATATTCAG+GGG + Chr2:25008229-25008248 MsG0280008067.01.T01:intron 15.0%
!! AATATTTCAAATAGGCTTAA+TGG - Chr2:25008137-25008156 None:intergenic 20.0%
!! ATGCAAAACATATAAATACA+CGG - Chr2:25006823-25006842 None:intergenic 20.0%
!! CATAAATCTCAAAAAGAAAA+TGG + Chr2:25008439-25008458 MsG0280008067.01.T01:CDS 20.0%
!! TATTAGATTAAGTGCATATT+TGG - Chr2:25007063-25007082 None:intergenic 20.0%
!! TTAAATGATTAACAATTGCA+GGG + Chr2:25008041-25008060 MsG0280008067.01.T01:intron 20.0%
!! TTAAATGATTAACAATTGCA+GGG - Chr2:25008060-25008041 None:intergenic 20.0%
!! TTTAAATGATTAACAATTGC+AGG + Chr2:25008040-25008059 MsG0280008067.01.T01:intron 20.0%
!! TTTAAATGATTAACAATTGC+AGG - Chr2:25008059-25008040 None:intergenic 20.0%
!!! ACAATAGATTCATAATTTGT+AGG + Chr2:25007095-25007114 MsG0280008067.01.T01:intron 20.0%
!!! ATGTTTTGCATTATTTTTCA+TGG + Chr2:25006832-25006851 MsG0280008067.01.T01:intron 20.0%
!!! ATTGAATATTTTCAATCCAA+AGG + Chr2:25007464-25007483 MsG0280008067.01.T01:CDS 20.0%
!!! TACATTCTGTCAAATTTTTT+TGG - Chr2:25008416-25008435 None:intergenic 20.0%
!!! TCTATTTTATTGAATCATGA+AGG + Chr2:25007188-25007207 MsG0280008067.01.T01:CDS 20.0%
!!! TGAAGTTATTGATGATATTA+AGG + Chr2:25007253-25007272 MsG0280008067.01.T01:CDS 20.0%
!!! TTCAATTTTCAACAAAATCA+CGG + Chr2:25007026-25007045 MsG0280008067.01.T01:intron 20.0%
!!! TTTTTGGCTGTATTTTTAAA+GGG + Chr2:25007155-25007174 MsG0280008067.01.T01:intron 20.0%
! AATTGATGTTCAAAAACAGA+TGG - Chr2:25008539-25008558 None:intergenic 25.0%
! ACATATAAATACACGGATAA+TGG - Chr2:25006816-25006835 None:intergenic 25.0%
! AGAAATCATCTCATCAAAAT+CGG - Chr2:25006683-25006702 None:intergenic 25.0%
! GGATTGAAAATATTCAATCA+AGG - Chr2:25007462-25007481 None:intergenic 25.0%
! TAAATGATTAACAATTGCAG+GGG + Chr2:25008042-25008061 MsG0280008067.01.T01:intron 25.0%
! TAAATGATTAACAATTGCAG+GGG - Chr2:25008061-25008042 None:intergenic 25.0%
! TAAGGAAAAAAAATAAGCCA+GGG + Chr2:25007941-25007960 MsG0280008067.01.T01:intron 25.0%
! TGAAAAAAAAAATTAGCCCA+GGG - Chr2:25007771-25007790 None:intergenic 25.0%
! TTAAGGAAAAAAAATAAGCC+AGG + Chr2:25007940-25007959 MsG0280008067.01.T01:intron 25.0%
! TTGAAAAAAAAAATTAGCCC+AGG - Chr2:25007772-25007791 None:intergenic 25.0%
!! ATTTTCTTTGCAAGAAGTTA+AGG - Chr2:25008352-25008371 None:intergenic 25.0%
!! TTCATGTTTGGTAATTTGAT+TGG - Chr2:25006911-25006930 None:intergenic 25.0%
!!! CTTTTTGGCTGTATTTTTAA+AGG + Chr2:25007154-25007173 MsG0280008067.01.T01:intron 25.0%
!!! TGCATTATTTTTCATGGATT+TGG + Chr2:25006838-25006857 MsG0280008067.01.T01:intron 25.0%
AAATCTGTATCCTCTAATGT+TGG - Chr2:25006437-25006456 None:intergenic 30.0%
AACATTAGAGGATACAGATT+TGG + Chr2:25006436-25006455 MsG0280008067.01.T01:CDS 30.0%
AAGGAAAAAAAATAAGCCAG+GGG + Chr2:25007942-25007961 MsG0280008067.01.T01:intron 30.0%
AATCTGTATCCTCTAATGTT+GGG - Chr2:25006436-25006455 None:intergenic 30.0%
ACCTTATGATGAAAACTATG+AGG + Chr2:25006388-25006407 MsG0280008067.01.T01:CDS 30.0%
ATATTCTTACAACTGCTTCA+AGG + Chr2:25007318-25007337 MsG0280008067.01.T01:CDS 30.0%
CAAACATACACTAGAGTAAA+TGG - Chr2:25006941-25006960 None:intergenic 30.0%
CATTTACTCTAGTGTATGTT+TGG + Chr2:25006939-25006958 MsG0280008067.01.T01:intron 30.0%
CTTGCAAAGAAAATGTAGAT+GGG + Chr2:25008358-25008377 MsG0280008067.01.T01:CDS 30.0%
GAAAAAAAAAATTAGCCCAG+GGG - Chr2:25007770-25007789 None:intergenic 30.0%
GAGAATGACTTACAAAGATA+GGG + Chr2:25008178-25008197 MsG0280008067.01.T01:intron 30.0%
TATTCTTACAACTGCTTCAA+GGG + Chr2:25007319-25007338 MsG0280008067.01.T01:CDS 30.0%
TATTGACAAAGAAGCTGAAA+TGG + Chr2:25007409-25007428 MsG0280008067.01.T01:CDS 30.0%
TCTTGCAAAGAAAATGTAGA+TGG + Chr2:25008357-25008376 MsG0280008067.01.T01:CDS 30.0%
TGAGAATGACTTACAAAGAT+AGG + Chr2:25008177-25008196 MsG0280008067.01.T01:intron 30.0%
TGGTTAGTAAACCATCAAAT+TGG - Chr2:25008205-25008224 None:intergenic 30.0%
TTGGATAATCTCTTATCCTT+TGG + Chr2:25006455-25006474 MsG0280008067.01.T01:CDS 30.0%
TTTGGATTTCCTATAGTAGT+CGG + Chr2:25006856-25006875 MsG0280008067.01.T01:intron 30.0%
! CATAGTTTTCATCATAAGGT+TGG - Chr2:25006388-25006407 None:intergenic 30.0%
! TCCTCATAGTTTTCATCATA+AGG - Chr2:25006392-25006411 None:intergenic 30.0%
!! AGCATTGACAAAATTGCAAT+TGG - Chr2:25008630-25008649 None:intergenic 30.0%
!! AGGTATTTTGGATCTAATGA+TGG - Chr2:25008332-25008351 None:intergenic 30.0%
!! AGTCAAAGAATGGATTAAGA+AGG + Chr2:25006526-25006545 MsG0280008067.01.T01:CDS 30.0%
!! GGTATTTTGGATCTAATGAT+GGG - Chr2:25008331-25008350 None:intergenic 30.0%
!! GTATTTTTAAAGGGATGTGA+TGG + Chr2:25007164-25007183 MsG0280008067.01.T01:intron 30.0%
!! TGCAAGAAGTTAAGGTATTT+TGG - Chr2:25008344-25008363 None:intergenic 30.0%
AAAGATAGGGACCAATTTGA+TGG + Chr2:25008191-25008210 MsG0280008067.01.T01:intron 35.0%
AATAGGCGGCGTTTAAAAAT+TGG + Chr2:25007615-25007634 MsG0280008067.01.T01:intron 35.0%
AATAGGCGGCGTTTAAAAAT+TGG - Chr2:25007634-25007615 None:intergenic 35.0%
AATGGTCTAGACTTCATGTT+TGG - Chr2:25006923-25006942 None:intergenic 35.0%
ATCAAGATCCACATATTCTG+AGG - Chr2:25008384-25008403 None:intergenic 35.0%
CAGATTAGCAAAAATGGCAT+GGG - Chr2:25007982-25008001 None:intergenic 35.0%
GAACCAAAAGAAGCAACAAT+CGG - Chr2:25006340-25006359 None:intergenic 35.0%
TACAGGTTATACAACTACCA+AGG + Chr2:25008290-25008309 MsG0280008067.01.T01:CDS 35.0%
TCAAGGAAGTAATGTTCTCA+TGG - Chr2:25007445-25007464 None:intergenic 35.0%
TCTAGTGTATGTTTGGATTG+TGG + Chr2:25006946-25006965 MsG0280008067.01.T01:intron 35.0%
TGAATCATGAAGGAAGTGAA+AGG + Chr2:25007198-25007217 MsG0280008067.01.T01:CDS 35.0%
TGCATAGCAAAGTCAAAGAA+TGG + Chr2:25006516-25006535 MsG0280008067.01.T01:CDS 35.0%
TGTTTGGATTGTGGTAAGTT+TGG + Chr2:25006955-25006974 MsG0280008067.01.T01:intron 35.0%
TTATACAACTACCAAGGAAC+AGG + Chr2:25008296-25008315 MsG0280008067.01.T01:CDS 35.0%
TTGGATTTCCTATAGTAGTC+GGG + Chr2:25006857-25006876 MsG0280008067.01.T01:intron 35.0%
! GCAAGATGGATTCAAATTGA+GGG - Chr2:25006499-25006518 None:intergenic 35.0%
! GCTGTTTCAATGTCAAAGTT+TGG + Chr2:25008560-25008579 MsG0280008067.01.T01:CDS 35.0%
! GCTTTTATGGTAGTAACCAA+AGG - Chr2:25006474-25006493 None:intergenic 35.0%
! TGCAAGATGGATTCAAATTG+AGG - Chr2:25006500-25006519 None:intergenic 35.0%
! TTCAAAAACAGATGGTGTTG+TGG - Chr2:25008531-25008550 None:intergenic 35.0%
! TTTGACTTTGCTATGCAAGA+TGG - Chr2:25006513-25006532 None:intergenic 35.0%
ACTATTGGAAGGACTACTTG+TGG + Chr2:25008257-25008276 MsG0280008067.01.T01:CDS 40.0%
ACTTCCATGATTGCTCTGTT+AGG + Chr2:25006582-25006601 MsG0280008067.01.T01:CDS 40.0%
AGAAGCTGAAATGGTACCAA+TGG + Chr2:25007418-25007437 MsG0280008067.01.T01:CDS 40.0%
CAAGTAAGCAAGACATTGAG+AGG + Chr2:25007227-25007246 MsG0280008067.01.T01:CDS 40.0%
CAGATTGGCAAAAATGGCAT+GGG + Chr2:25007730-25007749 MsG0280008067.01.T01:intron 40.0%
CATATTGGTCAGTCCCTTAT+GGG + Chr2:25007366-25007385 MsG0280008067.01.T01:CDS 40.0%
CCAGATTAGCAAAAATGGCA+TGG - Chr2:25007983-25008002 None:intergenic 40.0%
CGTCACCAGATTAGCAAAAA+TGG - Chr2:25007988-25008007 None:intergenic 40.0%
CTGAGAGAACAACTAAGTCA+AGG - Chr2:25007499-25007518 None:intergenic 40.0%
CTTCCATGATTGCTCTGTTA+GGG + Chr2:25006583-25006602 MsG0280008067.01.T01:CDS 40.0%
CTTGACTTAGTTGTTCTCTC+AGG + Chr2:25007497-25007516 MsG0280008067.01.T01:CDS 40.0%
GAAACAAGTGGAGAAGTTCT+TGG - Chr2:25008500-25008519 None:intergenic 40.0%
GAAGCTGAAATGGTACCAAT+GGG + Chr2:25007419-25007438 MsG0280008067.01.T01:CDS 40.0%
GAATTGACCAAAATACCCCT+GGG + Chr2:25007752-25007771 MsG0280008067.01.T01:intron 40.0%
GAGATGATGAAGGAGAAATC+AGG + Chr2:25008603-25008622 MsG0280008067.01.T01:CDS 40.0%
GTTCTTACTGGAGATGATGA+AGG + Chr2:25008593-25008612 MsG0280008067.01.T01:CDS 40.0%
TCTACAAGTCCCAACATTAG+AGG + Chr2:25006424-25006443 MsG0280008067.01.T01:CDS 40.0%
TGTCTTTAGTCCCTGCAAAT+AGG + Chr2:25007598-25007617 MsG0280008067.01.T01:intron 40.0%
TTCCATCTTTCCTCCCATAA+GGG - Chr2:25007382-25007401 None:intergenic 40.0%
TTCTCCACTTGTTTCAGCAT+TGG + Chr2:25008505-25008524 MsG0280008067.01.T01:CDS 40.0%
TTTCCATCTTTCCTCCCATA+AGG - Chr2:25007383-25007402 None:intergenic 40.0%
! AACACTGATTGCTAGACTAC+AGG - Chr2:25006886-25006905 None:intergenic 40.0%
! AATCATGGAAGTGCAACCTT+AGG - Chr2:25006574-25006593 None:intergenic 40.0%
! CAAATTGAGGGCAGCTTTTA+TGG - Chr2:25006487-25006506 None:intergenic 40.0%
! CTTGTGGCTCTATTCAATAC+AGG + Chr2:25008273-25008292 MsG0280008067.01.T01:CDS 40.0%
! TATTCAGGGGCACATACTAT+TGG + Chr2:25008242-25008261 MsG0280008067.01.T01:intron 40.0%
! TCAGCACAAGAGACTGTTTT+AGG - Chr2:25007299-25007318 None:intergenic 40.0%
!! GCAGTGATTAAGTTGGTCAA+AGG + Chr2:25008010-25008029 MsG0280008067.01.T01:intron 40.0%
!! GCAGTGATTAAGTTGGTCAA+AGG - Chr2:25008029-25008010 None:intergenic 40.0%
!! GGTGTCATTGATGTTCTTAC+TGG + Chr2:25008581-25008600 MsG0280008067.01.T01:CDS 40.0%
!! TTTGGATCTAATGATGGGTC+TGG - Chr2:25008326-25008345 None:intergenic 40.0%
!! TTTTTGCTAATCTGGTGACG+TGG + Chr2:25007988-25008007 MsG0280008067.01.T01:intron 40.0%
!!! AAATTAGCCCAGGGGTATTT+TGG - Chr2:25007762-25007781 None:intergenic 40.0%
!!! CCATGCCATTTTTGCTAATC+TGG + Chr2:25007980-25007999 MsG0280008067.01.T01:intron 40.0%
AATTGCAGGGGTAAAATGCC+AGG + Chr2:25008054-25008073 MsG0280008067.01.T01:intron 45.0%
AATTGCAGGGGTAAAATGCC+AGG - Chr2:25008073-25008054 None:intergenic 45.0%
ACAGGATTCCCGACTACTAT+AGG - Chr2:25006868-25006887 None:intergenic 45.0%
CATGATTGCTCTGTTAGGGT+GGG + Chr2:25006587-25006606 MsG0280008067.01.T01:intron 45.0%
CCAAAAGAAGCAACAATCGG+AGG - Chr2:25006337-25006356 None:intergenic 45.0%
CCAGATTGGCAAAAATGGCA+TGG + Chr2:25007729-25007748 MsG0280008067.01.T01:intron 45.0%
CCATAAGGGACTGACCAATA+TGG - Chr2:25007368-25007387 None:intergenic 45.0%
CCATATTGGTCAGTCCCTTA+TGG + Chr2:25007365-25007384 MsG0280008067.01.T01:CDS 45.0%
CGTCACCAGATTGGCAAAAA+TGG + Chr2:25007724-25007743 MsG0280008067.01.T01:intron 45.0%
CTTTAGTCCCTGCAAATAGG+CGG + Chr2:25007601-25007620 MsG0280008067.01.T01:intron 45.0%
GGAAATGACGAAATTACCCC+TGG - Chr2:25007961-25007980 None:intergenic 45.0%
GGAATTGACCAAAATACCCC+TGG + Chr2:25007751-25007770 MsG0280008067.01.T01:intron 45.0%
GTAATGTTCTCATGGCCCAT+TGG - Chr2:25007437-25007456 None:intergenic 45.0%
TAGATGGGCCTCAGAATATG+TGG + Chr2:25008373-25008392 MsG0280008067.01.T01:CDS 45.0%
TGACGTGGCAGTGATTAAGT+TGG + Chr2:25008003-25008022 MsG0280008067.01.T01:intron 45.0%
TGACGTGGCAGTGATTAAGT+TGG - Chr2:25008022-25008003 None:intergenic 45.0%
TTAAACGCCGCCTATTTGCA+GGG + Chr2:25008101-25008120 MsG0280008067.01.T01:intron 45.0%
TTAAACGCCGCCTATTTGCA+GGG - Chr2:25008120-25008101 None:intergenic 45.0%
TTTAAACGCCGCCTATTTGC+AGG + Chr2:25008100-25008119 MsG0280008067.01.T01:intron 45.0%
TTTAAACGCCGCCTATTTGC+AGG - Chr2:25008119-25008100 None:intergenic 45.0%
! ATGCCAGGATTAGCGATTAC+AGG + Chr2:25008069-25008088 MsG0280008067.01.T01:intron 45.0%
! ATGCCAGGATTAGCGATTAC+AGG - Chr2:25008088-25008069 None:intergenic 45.0%
! CTTTAGCAGCTAGTCTCCTA+AGG + Chr2:25006555-25006574 MsG0280008067.01.T01:CDS 45.0%
! TGCCAGGATTAGCGATTACA+GGG + Chr2:25008070-25008089 MsG0280008067.01.T01:intron 45.0%
! TGCCAGGATTAGCGATTACA+GGG - Chr2:25008089-25008070 None:intergenic 45.0%
!! CCTCCGATTGTTGCTTCTTT+TGG + Chr2:25006334-25006353 MsG0280008067.01.T01:CDS 45.0%
!! TTGAGTTGGGTGGACCATAT+TGG + Chr2:25007351-25007370 MsG0280008067.01.T01:CDS 45.0%
!! TTTTTGCCAATCTGGTGACG+TGG - Chr2:25007724-25007743 None:intergenic 45.0%
!!! CCATGCCATTTTTGCCAATC+TGG - Chr2:25007732-25007751 None:intergenic 45.0%
AAGGGATGCCACTGTTGAGT+TGG + Chr2:25007337-25007356 MsG0280008067.01.T01:CDS 50.0%
AGGGATGCCACTGTTGAGTT+GGG + Chr2:25007338-25007357 MsG0280008067.01.T01:CDS 50.0%
ATTGGTCAGTCCCTTATGGG+AGG + Chr2:25007369-25007388 MsG0280008067.01.T01:CDS 50.0%
CCACCCTAACAGAGCAATCA+TGG - Chr2:25006589-25006608 None:intergenic 50.0%
CCATGATTGCTCTGTTAGGG+TGG + Chr2:25006586-25006605 MsG0280008067.01.T01:intron 50.0%
GTCAAGGACAGTCAAGCCTT+TGG - Chr2:25007483-25007502 None:intergenic 50.0%
GTCCCTGTAATCGCTAATCC+TGG + Chr2:25007637-25007656 MsG0280008067.01.T01:intron 50.0%
GTCCCTGTAATCGCTAATCC+TGG - Chr2:25007656-25007637 None:intergenic 50.0%
GTCCCTTATGGGAGGAAAGA+TGG + Chr2:25007377-25007396 MsG0280008067.01.T01:CDS 50.0%
GTGGCCAATGCTGAAACAAG+TGG - Chr2:25008512-25008531 None:intergenic 50.0%
TAAACGCCGCCTATTTGCAG+GGG + Chr2:25008102-25008121 MsG0280008067.01.T01:intron 50.0%
TGTGTTTCGCCCCTGCAAAT+AGG - Chr2:25008114-25008133 None:intergenic 50.0%
! CAGGGGCACATACTATTGGA+AGG + Chr2:25008246-25008265 MsG0280008067.01.T01:intron 50.0%
GTTTCGCCCCTGCAAATAGG+CGG - Chr2:25008111-25008130 None:intergenic 55.0%
TCACTGCCACGTCACCAGAT+TGG + Chr2:25007715-25007734 MsG0280008067.01.T01:intron 55.0%
TGGTCCACCCAACTCAACAG+TGG - Chr2:25007348-25007367 None:intergenic 55.0%
! GGTCTGGTTTGCCTGTTCCT+TGG - Chr2:25008310-25008329 None:intergenic 55.0%
!! GATGCCACTGTTGAGTTGGG+TGG + Chr2:25007341-25007360 MsG0280008067.01.T01:CDS 55.0%
Chromosome Type Strat End Strand Name
Chr2 gene 25006320 25008655 25006320 ID=MsG0280008067.01;Name=MsG0280008067.01
Chr2 mRNA 25006320 25008655 25006320 ID=MsG0280008067.01.T01;Parent=MsG0280008067.01;Name=MsG0280008067.01.T01;_AED=0.18;_eAED=0.18;_QI=0|0|0|1|1|1|3|0|344
Chr2 exon 25006320 25006604 25006320 ID=MsG0280008067.01.T01:exon:40630;Parent=MsG0280008067.01.T01
Chr2 exon 25007176 25007518 25007176 ID=MsG0280008067.01.T01:exon:40631;Parent=MsG0280008067.01.T01
Chr2 exon 25008249 25008655 25008249 ID=MsG0280008067.01.T01:exon:40632;Parent=MsG0280008067.01.T01
Chr2 CDS 25006320 25006604 25006320 ID=MsG0280008067.01.T01:cds;Parent=MsG0280008067.01.T01
Chr2 CDS 25007176 25007518 25007176 ID=MsG0280008067.01.T01:cds;Parent=MsG0280008067.01.T01
Chr2 CDS 25008249 25008655 25008249 ID=MsG0280008067.01.T01:cds;Parent=MsG0280008067.01.T01
Gene Sequence

>MsG0280008067.01.T01

ATGTCAAATTCTTACCTCCGATTGTTGCTTCTTTTGGTTCTTTACATAATTTCAGCTAATTCAATCCAACCTTATGATGAAAACTATGAGGATGCTGAGTTCACTCTACAAGTCCCAACATTAGAGGATACAGATTTGGATAATCTCTTATCCTTTGGTTACTACCATAAAAGCTGCCCTCAATTTGAATCCATCTTGCATAGCAAAGTCAAAGAATGGATTAAGAAGGATTACACTTTAGCAGCTAGTCTCCTAAGGTTGCACTTCCATGATTGCTCTGTTAGGGGATGTGATGGCTCTATTTTATTGAATCATGAAGGAAGTGAAAGGAAATCACAAGTAAGCAAGACATTGAGAGGTTATGAAGTTATTGATGATATTAAGGCAGAGATAGAGAAACAATGTCCTAAAACAGTCTCTTGTGCTGATATTCTTACAACTGCTTCAAGGGATGCCACTGTTGAGTTGGGTGGACCATATTGGTCAGTCCCTTATGGGAGGAAAGATGGAAAAGTTTCTATTGACAAAGAAGCTGAAATGGTACCAATGGGCCATGAGAACATTACTTCCTTGATTGAATATTTTCAATCCAAAGGCTTGACTGTCCTTGACTTAGTTGTTCTCTCAGGGGCACATACTATTGGAAGGACTACTTGTGGCTCTATTCAATACAGGTTATACAACTACCAAGGAACAGGCAAACCAGACCCATCATTAGATCCAAAATACCTTAACTTCTTGCAAAGAAAATGTAGATGGGCCTCAGAATATGTGGATCTTGATGCAACAACACCAAAAAAATTTGACAGAATGTACTACATAAATCTCAAAAAGAAAATGGGATTGTTAACAACAGATCAATTGTTATATTCTGATCCAAGAACTTCTCCACTTGTTTCAGCATTGGCCACAACACCATCTGTTTTTGAACATCAATTTGCTGTTTCAATGTCAAAGTTTGGTGTCATTGATGTTCTTACTGGAGATGATGAAGGAGAAATCAGGACCAATTGCAATTTTGTCAATGCTTATTGA
Protein sequence

>MsG0280008067.01.T01

MSNSYLRLLLLLVLYIISANSIQPYDENYEDAEFTLQVPTLEDTDLDNLLSFGYYHKSCPQFESILHSKVKEWIKKDYTLAASLLRLHFHDCSVRGCDGSILLNHEGSERKSQVSKTLRGYEVIDDIKAEIEKQCPKTVSCADILTTASRDATVELGGPYWSVPYGRKDGKVSIDKEAEMVPMGHENITSLIEYFQSKGLTVLDLVVLSGAHTIGRTTCGSIQYRLYNYQGTGKPDPSLDPKYLNFLQRKCRWASEYVDLDATTPKKFDRMYYINLKKKMGLLTTDQLLYSDPRTSPLVSALATTPSVFEHQFAVSMSKFGVIDVLTGDDEGEIRTNCNFVNAY*