AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280008640.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280008640.01.T01 MTR_2g046710 99.490 392 2 0 1 392 1 392 0.0 810
MsG0280008640.01.T01 MTR_4g123810 94.087 389 23 0 1 389 1 389 0.0 741
MsG0280008640.01.T01 MTR_7g110310 93.316 389 26 0 4 392 3 391 0.0 738
MsG0280008640.01.T01 MTR_7g102120 90.415 386 37 0 4 389 2 387 0.0 704
MsG0280008640.01.T01 MTR_1g063060 87.824 386 47 0 4 389 2 387 0.0 693
MsG0280008640.01.T01 MTR_1g063060 87.824 386 47 0 4 389 20 405 0.0 693
MsG0280008640.01.T01 MTR_5g034470 93.220 59 4 0 397 455 74 132 5.08e-29 117
MsG0280008640.01.T01 MTR_5g034470 94.828 58 3 0 398 455 75 132 7.78e-29 117
MsG0280008640.01.T01 MTR_8g063940 89.655 58 6 0 398 455 74 131 9.25e-27 111
MsG0280008640.01.T01 MTR_3g078190 74.576 59 15 0 397 455 63 121 3.03e-24 103
MsG0280008640.01.T01 MTR_3g091090 80.000 55 11 0 399 453 90 144 5.14e-22 97.8
MsG0280008640.01.T01 MTR_1g028360 74.545 55 14 0 399 453 95 149 1.68e-20 93.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280008640.01.T01 AT3G17390 94.344 389 22 0 4 392 2 390 0.0 744
MsG0280008640.01.T01 AT1G02500 92.545 389 29 0 4 392 2 390 0.0 724
MsG0280008640.01.T01 AT1G02500 92.545 389 29 0 4 392 2 390 0.0 724
MsG0280008640.01.T01 AT4G01850 91.003 389 35 0 4 392 2 390 0.0 722
MsG0280008640.01.T01 AT4G01850 91.003 389 35 0 4 392 2 390 0.0 722
MsG0280008640.01.T01 AT2G36880 90.415 386 37 0 4 389 2 387 0.0 707
MsG0280008640.01.T01 AT2G36880 90.415 386 37 0 4 389 2 387 0.0 707
MsG0280008640.01.T01 AT1G23820 94.828 58 3 0 398 455 67 124 4.30e-29 117
MsG0280008640.01.T01 AT1G23820 93.220 59 4 0 397 455 110 168 5.75e-29 117
MsG0280008640.01.T01 AT1G70310 93.103 58 4 0 398 455 71 128 5.02e-28 115
MsG0280008640.01.T01 AT5G53120 57.471 87 22 1 389 460 66 152 3.27e-23 102
MsG0280008640.01.T01 AT5G53120 61.250 80 16 1 389 453 66 145 7.85e-23 100
MsG0280008640.01.T01 AT5G53120 61.250 80 16 1 389 453 66 145 7.85e-23 100
MsG0280008640.01.T01 AT5G53120 61.250 80 16 1 389 453 66 145 7.85e-23 100
MsG0280008640.01.T01 AT5G53120 61.250 80 16 1 389 453 66 145 7.85e-23 100
MsG0280008640.01.T01 AT5G53120 61.250 80 16 1 389 453 66 145 7.85e-23 100
MsG0280008640.01.T01 AT5G53120 61.250 80 16 1 389 453 83 162 1.62e-22 99.8

Find 137 sgRNAs with CRISPR-Local

Find 323 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACATAATGGGTTACAGTTAA+TGG 0.152203 2:-35579220 MsG0280008640.01.T01:CDS
TCATTAATTTCAGGTATAAT+TGG 0.218287 2:-35579814 MsG0280008640.01.T01:intron
ACTGCTGCTTATGGACATTT+TGG 0.240476 2:-35582496 MsG0280008640.01.T01:CDS
ATGTTAAGGATTTCCTTATC+AGG 0.261463 2:+35582604 None:intergenic
TCAAGGAAAATCTGATTATC+AGG 0.273203 2:-35579777 MsG0280008640.01.T01:CDS
ATATGGCAAGGTTCTTGTTT+TGG 0.280455 2:-35579616 MsG0280008640.01.T01:CDS
CTCAATTCCAAACCCCAAAA+AGG 0.285078 2:-35579523 MsG0280008640.01.T01:intron
TTCCTTATCAGGGATCTTTC+CGG 0.289318 2:+35582615 None:intergenic
GTTGCAAGAACATGGGTTAA+AGG 0.294303 2:+35583174 None:intergenic
CATGTTCTTGCAACCAAGTT+AGG 0.294943 2:-35583165 MsG0280008640.01.T01:CDS
ACCAACATGGTTATGGTCTT+TGG 0.296902 2:-35583447 MsG0280008640.01.T01:CDS
TTCTCATCAAGGTACTTCTC+TGG 0.310083 2:+35582931 None:intergenic
TAATGGGATTTGAACATAAT+GGG 0.327130 2:-35579233 MsG0280008640.01.T01:CDS
CATCGATACCTACGGTGGTT+GGG 0.340499 2:-35582824 MsG0280008640.01.T01:CDS
TCAGGATGTTATGGTCTTCC+AGG 0.350984 2:-35579759 MsG0280008640.01.T01:intron
ATCTGGTCGCAAAGCTTGTC+GGG 0.354536 2:+35583543 None:intergenic
TGAAAGAAACCTTTGACTTC+AGG 0.356558 2:-35582579 MsG0280008640.01.T01:CDS
TTAAGAGGGGTGGAAATAAC+AGG 0.368924 2:-35582528 MsG0280008640.01.T01:CDS
ATCTGATTATCAGGATGTTA+TGG 0.375563 2:-35579768 MsG0280008640.01.T01:CDS
TCACATGCAACTTTGCTGTC+TGG 0.378990 2:+35583483 None:intergenic
ATCAGCTGCAATTTCATCAT+TGG 0.382947 2:+35582984 None:intergenic
GACTACTCACCAGTGTTCTA+AGG 0.384547 2:-35579164 MsG0280008640.01.T01:CDS
TTAATGGGATTTGAACATAA+TGG 0.389049 2:-35579234 MsG0280008640.01.T01:CDS
GTGATCAAGGTCACATGTTC+GGG 0.391846 2:-35583227 MsG0280008640.01.T01:CDS
CTATCAACCTTGATCTTAAG+AGG 0.391961 2:-35582543 MsG0280008640.01.T01:CDS
GATATTGCTCAAGGTGTTCA+TGG 0.399050 2:-35583285 MsG0280008640.01.T01:CDS
TGGTTCAATTTGTTGTTTCA+AGG 0.410701 2:-35579794 MsG0280008640.01.T01:CDS
GGTGATCAAGGTCACATGTT+CGG 0.414273 2:-35583228 MsG0280008640.01.T01:CDS
AATGGATTTGAGGGAGAAGA+GGG 0.417140 2:-35579202 MsG0280008640.01.T01:CDS
CACAAAGACCAACATGGTTA+TGG 0.418184 2:-35583454 MsG0280008640.01.T01:CDS
AGGTTTCTTTCACAATGTTA+AGG 0.420122 2:+35582590 None:intergenic
TTCCACCCCTCTTAAGATCA+AGG 0.427046 2:+35582536 None:intergenic
GTTACAGTTAATGGATTTGA+GGG 0.431157 2:-35579211 MsG0280008640.01.T01:CDS
TCTCATCAAGGTACTTCTCT+GGG 0.433415 2:+35582932 None:intergenic
AGGTTGATAGAGATCATTCC+TGG 0.433466 2:+35582556 None:intergenic
CACGGTGACGCTGGTCTAAC+CGG 0.435684 2:-35582859 MsG0280008640.01.T01:CDS
ATCTTCCACTTGAACCCTTC+AGG 0.443169 2:-35582904 MsG0280008640.01.T01:CDS
TGAACACCTTGAGCAATATC+AGG 0.445358 2:+35583288 None:intergenic
TCACAGATTCAGATGTGTAT+AGG 0.445528 2:+35583577 None:intergenic
GGTTGGGGTGCACACGGTGG+TGG 0.446281 2:-35582808 MsG0280008640.01.T01:CDS
CACGGTGGTGGTGCTTTCTC+CGG 0.452162 2:-35582796 MsG0280008640.01.T01:CDS
GCAAAGAGTATTGTTGCTAA+TGG 0.456252 2:-35582721 MsG0280008640.01.T01:CDS
CTAACTTGGTTGCAAGAACA+TGG 0.459951 2:+35583166 None:intergenic
CGTCGTGCTGTGTTGAGATA+AGG 0.460565 2:+35583016 None:intergenic
CAAGAACGGCATCAGAGATC+TGG 0.466047 2:+35583526 None:intergenic
GAAACCTTTGACTTCAGGCC+AGG 0.467102 2:-35582574 MsG0280008640.01.T01:CDS
GTGACTTGGGTCTTTCCATC+AGG 0.467493 2:+35583093 None:intergenic
CCTTCAGGCCGTTTCGTCAT+CGG 0.467571 2:-35582889 MsG0280008640.01.T01:CDS
GGTTACAGTTAATGGATTTG+AGG 0.467840 2:-35579212 MsG0280008640.01.T01:CDS
TTGCTAATGGACTTGCTAGA+AGG 0.469452 2:-35582708 MsG0280008640.01.T01:CDS
ATCGATACCTACGGTGGTTG+GGG 0.475144 2:-35582823 MsG0280008640.01.T01:CDS
ACAAACACGGACAATGGCTC+TGG 0.479016 2:+35582652 None:intergenic
TAATGGATTTGAGGGAGAAG+AGG 0.484774 2:-35579203 MsG0280008640.01.T01:CDS
ATATAAAACAAGTGTGTAGC+AGG 0.487250 2:+35579276 None:intergenic
CGTAACACATGCAGGAACAT+AGG 0.489461 2:-35583381 MsG0280008640.01.T01:CDS
GATGATGGTGGTGGTTGTTG+TGG 0.490743 2:+35579138 None:intergenic
TTTGTTGATTCTTACGGTAC+CGG 0.493288 2:-35582634 MsG0280008640.01.T01:CDS
TGAAGGGTTCAAGTGGAAGA+TGG 0.500503 2:+35582906 None:intergenic
TCCGTGTTTGTTGATTCTTA+CGG 0.503083 2:-35582640 MsG0280008640.01.T01:CDS
GATCTGGTCGCAAAGCTTGT+CGG 0.504899 2:+35583542 None:intergenic
AGTGAGCTTAGCTCCTAACT+TGG 0.505858 2:+35583152 None:intergenic
GAAATTGGTGCTGGTGATCA+AGG 0.514486 2:-35583240 MsG0280008640.01.T01:CDS
TGTTAAGGATTTCCTTATCA+GGG 0.514572 2:+35582605 None:intergenic
TACGGTGGTTGGGGTGCACA+CGG 0.522520 2:-35582814 MsG0280008640.01.T01:CDS
AGGTACTTCTCTGGGATCAC+AGG 0.524549 2:+35582940 None:intergenic
GTGCAAGTTTCCTATGCTAT+CGG 0.528063 2:-35582679 MsG0280008640.01.T01:CDS
TGCTGTCTGGATCTTGCTCA+AGG 0.528629 2:+35583496 None:intergenic
GCAAGAACGGAACATGCCCT+TGG 0.529608 2:-35583122 MsG0280008640.01.T01:CDS
TACCGGAAAGATCCCTGATA+AGG 0.532446 2:-35582617 MsG0280008640.01.T01:CDS
GAAGATGAGTGATCATCTCT+TGG 0.533026 2:+35579553 None:intergenic
GGTCATTCAGCTCACAGAAT+GGG 0.533140 2:-35579589 MsG0280008640.01.T01:CDS
GCTAACTTTCCACCCTTGAG+TGG 0.533954 2:+35582436 None:intergenic
TCATCGATACCTACGGTGGT+TGG 0.534200 2:-35582825 MsG0280008640.01.T01:CDS
TTCGTCATCGGTGGTCCTCA+CGG 0.537678 2:-35582877 MsG0280008640.01.T01:CDS
TCACCAGCACCAATTTCCTC+AGG 0.537693 2:+35583246 None:intergenic
GGTGGTCCTCACGGTGACGC+TGG 0.538563 2:-35582868 MsG0280008640.01.T01:CDS
CATTCCTGGCCTGAAGTCAA+AGG 0.538937 2:+35582570 None:intergenic
CTCACTGAAGTTCGCAAGAA+CGG 0.541655 2:-35583135 MsG0280008640.01.T01:CDS
AACCTTGATCTTAAGAGGGG+TGG 0.542096 2:-35582538 MsG0280008640.01.T01:CDS
CGATGACGAAACGGCCTGAA+GGG 0.544735 2:+35582890 None:intergenic
GAAATACTCAATAGTGACTT+GGG 0.547189 2:+35583080 None:intergenic
CATAAGCTCAGGTGTTTCAT+CGG 0.547507 2:+35583197 None:intergenic
TGAAATACTCAATAGTGACT+TGG 0.552787 2:+35583079 None:intergenic
TGCCCTTGGTTGAGACCTGA+TGG 0.559477 2:-35583108 MsG0280008640.01.T01:CDS
AGAAGAGGGATGAAGAGTTG+AGG 0.562425 2:-35579188 MsG0280008640.01.T01:CDS
GGGTCATTCAGCTCACAGAA+TGG 0.563052 2:-35579590 MsG0280008640.01.T01:CDS
GAGGACCACCGATGACGAAA+CGG 0.563585 2:+35582881 None:intergenic
AAGATCCAACAAAAGTCGAC+AGG 0.563704 2:-35582771 MsG0280008640.01.T01:CDS
TGGGTTAAAGGCATAAGCTC+AGG 0.565243 2:+35583186 None:intergenic
TTTCAATGACAAGGGTGCCA+TGG 0.566099 2:-35583061 MsG0280008640.01.T01:CDS
CACATCTGAATCTGTGAACG+AGG 0.567405 2:-35583571 MsG0280008640.01.T01:CDS
GGAAGTTGTGAAGCCACTCA+AGG 0.570115 2:-35582449 MsG0280008640.01.T01:CDS
TATCAACCTTGATCTTAAGA+GGG 0.570559 2:-35582542 MsG0280008640.01.T01:CDS
CCGATGACGAAACGGCCTGA+AGG 0.572989 2:+35582889 None:intergenic
TCAGTCAGCAACATATGGCA+AGG 0.575511 2:-35579628 MsG0280008640.01.T01:intron
AGATTGTTCGTAACACATGC+AGG 0.575918 2:-35583389 MsG0280008640.01.T01:CDS
ATGAGTGATCATCTCTTGGT+AGG 0.576912 2:+35579557 None:intergenic
TTCCATCAGGTCTCAACCAA+GGG 0.579295 2:+35583106 None:intergenic
TTGTGGATTCCTTAGAACAC+TGG 0.583750 2:+35579155 None:intergenic
ATCGATGATGATCTTGCGGC+CGG 0.584426 2:+35582840 None:intergenic
GTGTTGAGATAAGGACGGTA+TGG 0.586897 2:+35583025 None:intergenic
TATTGAGTATTTCAATGACA+AGG 0.592614 2:-35583070 MsG0280008640.01.T01:CDS
AGACCTGAGGAAATTGGTGC+TGG 0.593942 2:-35583249 MsG0280008640.01.T01:CDS
GAATCAACAAACACGGACAA+TGG 0.604860 2:+35582646 None:intergenic
TCAGGCCGTTTCGTCATCGG+TGG 0.606053 2:-35582886 MsG0280008640.01.T01:CDS
AACGGCCTGAAGGGTTCAAG+TGG 0.607726 2:+35582899 None:intergenic
CAGAGTCCTGATATTGCTCA+AGG 0.609518 2:-35583294 MsG0280008640.01.T01:CDS
GAGATGATGCTGATTTCACA+TGG 0.613131 2:-35582471 MsG0280008640.01.T01:CDS
CTCAAGGCAAGCATCAAGAA+CGG 0.613435 2:+35583512 None:intergenic
ATTGAGTATTTCAATGACAA+GGG 0.615601 2:-35583069 MsG0280008640.01.T01:CDS
ACCAAAGACCATAACCATGT+TGG 0.617396 2:+35583446 None:intergenic
AGCAGGAGTTAGCATGGTGA+CGG 0.619651 2:+35579293 None:intergenic
GTGTGTAGCAGGAGTTAGCA+TGG 0.620147 2:+35579287 None:intergenic
CTCTGGAACACCGATAGCAT+AGG 0.620591 2:+35582669 None:intergenic
AGGACGGTATGGACACGGAT+CGG 0.620832 2:+35583036 None:intergenic
AGATAAGGACGGTATGGACA+CGG 0.625832 2:+35583031 None:intergenic
TTTCCATCAGGTCTCAACCA+AGG 0.628406 2:+35583105 None:intergenic
CCAACAAAAGTCGACAGGAG+TGG 0.630861 2:-35582766 MsG0280008640.01.T01:CDS
GAAGTTGTGAAGCCACTCAA+GGG 0.631025 2:-35582448 MsG0280008640.01.T01:CDS
AAGATCATCATCGATACCTA+CGG 0.632923 2:-35582832 MsG0280008640.01.T01:CDS
TCTGTTGTTCAATGTTGACA+AGG 0.633149 2:+35583313 None:intergenic
TAACTTGGTTGCAAGAACAT+GGG 0.635065 2:+35583167 None:intergenic
ATGGACACGGATCGGAACCA+TGG 0.635111 2:+35583044 None:intergenic
GGGTTTGGAATTGAGCAAAG+AGG 0.635906 2:+35579531 None:intergenic
AGGTATCGATGATGATCTTG+CGG 0.652737 2:+35582836 None:intergenic
GTGTGCACCCCAACCACCGT+AGG 0.659434 2:+35582816 None:intergenic
ATCAACCTTGATCTTAAGAG+GGG 0.662473 2:-35582541 MsG0280008640.01.T01:CDS
GTTGTGAAGCCACTCAAGGG+TGG 0.662760 2:-35582445 MsG0280008640.01.T01:CDS
GGTGGTTGGGGTGCACACGG+TGG 0.663588 2:-35582811 MsG0280008640.01.T01:CDS
TCTGGTCGCAAAGCTTGTCG+GGG 0.671297 2:+35583544 None:intergenic
ACCGTAAGAATCAACAAACA+CGG 0.692869 2:+35582639 None:intergenic
ACATCTGAATCTGTGAACGA+GGG 0.708400 2:-35583570 MsG0280008640.01.T01:CDS
AGATGATGCTGATTTCACAT+GGG 0.714850 2:-35582470 MsG0280008640.01.T01:CDS
GTTAGACCAGCGTCACCGTG+AGG 0.718676 2:+35582862 None:intergenic
ATCATCATCGATACCTACGG+TGG 0.735632 2:-35582829 MsG0280008640.01.T01:CDS
GTGCTGTGTTGAGATAAGGA+CGG 0.743744 2:+35583020 None:intergenic
AACTTGCACAAAGACCAACA+TGG 0.753910 2:-35583460 MsG0280008640.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGATATAAACATCAATATT+AGG - Chr2:35582135-35582154 MsG0280008640.01.T01:intron 15.0%
!! ACATATAATAAATGAAAACA+GGG + Chr2:35580408-35580427 None:intergenic 15.0%
!! ACATATACTAAATTATTAGA+GGG + Chr2:35583245-35583264 None:intergenic 15.0%
!! ATTAAAACATATTATAAGGT+AGG - Chr2:35580731-35580750 MsG0280008640.01.T01:intron 15.0%
!! CTGAATTAAAACATATTATA+AGG - Chr2:35580727-35580746 MsG0280008640.01.T01:intron 15.0%
!! TACATATAATAAATGAAAAC+AGG + Chr2:35580409-35580428 None:intergenic 15.0%
!! TGGAGTATATTTAATATTTA+AGG - Chr2:35580643-35580662 MsG0280008640.01.T01:intron 15.0%
!! TTAAATCAAGGATATTAAAT+AGG - Chr2:35582291-35582310 MsG0280008640.01.T01:intron 15.0%
!! TTGGTATTATTACATTATAT+GGG + Chr2:35580545-35580564 None:intergenic 15.0%
!! TTTGGTATTATTACATTATA+TGG + Chr2:35580546-35580565 None:intergenic 15.0%
!!! AAAAAACACTTTTTAAATCA+AGG - Chr2:35582279-35582298 MsG0280008640.01.T01:intron 15.0%
!!! AAATAAGATGGTTTTTAAAT+AGG - Chr2:35582359-35582378 MsG0280008640.01.T01:intron 15.0%
!!! ATTAAAAACCTTTTTAAATC+TGG + Chr2:35582389-35582408 None:intergenic 15.0%
!!! TTGGTTACTATATTTTTTTT+AGG - Chr2:35580587-35580606 MsG0280008640.01.T01:intron 15.0%
!! AATAATACCAAATTAAAGTG+AGG - Chr2:35580554-35580573 MsG0280008640.01.T01:intron 20.0%
!! AATTCAGGATAATAATTGTA+AGG - Chr2:35583307-35583326 MsG0280008640.01.T01:CDS 20.0%
!! AATTTCAATTGTTTCACTTA+CGG + Chr2:35580810-35580829 None:intergenic 20.0%
!! ATATTTATATATGTCTAACC+AGG + Chr2:35582114-35582133 None:intergenic 20.0%
!! ATTATACCTGAAATTAATGA+TGG + Chr2:35582911-35582930 None:intergenic 20.0%
!! CATATAATAAATGAAAACAG+GGG + Chr2:35580407-35580426 None:intergenic 20.0%
!! GACATATACTAAATTATTAG+AGG + Chr2:35583246-35583265 None:intergenic 20.0%
!! TTATTACTTGGTAAACAATT+TGG + Chr2:35581522-35581541 None:intergenic 20.0%
!!! AAAGTATCAAATACCTTTTT+GGG + Chr2:35583218-35583237 None:intergenic 20.0%
!!! TAGTAAGGTTTTAAATAAGA+TGG - Chr2:35582347-35582366 MsG0280008640.01.T01:intron 20.0%
!!! TCATTAATTTCAGGTATAAT+TGG - Chr2:35582911-35582930 MsG0280008640.01.T01:CDS 20.0%
!!! TTTTAATCATTACATGTAGA+TGG - Chr2:35583341-35583360 MsG0280008640.01.T01:CDS 20.0%
! AAAATATCTCTGTATTAGCA+CGG - Chr2:35580619-35580638 MsG0280008640.01.T01:intron 25.0%
! AACAATTCACGTTACTTATT+TGG - Chr2:35581588-35581607 MsG0280008640.01.T01:intron 25.0%
! AATGTCTATATTGAATCTCT+AGG - Chr2:35583388-35583407 MsG0280008640.01.T01:CDS 25.0%
! AATTCCAACAAATGAATAGA+GGG + Chr2:35581738-35581757 None:intergenic 25.0%
! ACAATTCACGTTACTTATTT+GGG - Chr2:35581589-35581608 MsG0280008640.01.T01:intron 25.0%
! ACCATTAACAAGTAAATCTA+GGG - Chr2:35582748-35582767 MsG0280008640.01.T01:CDS 25.0%
! AGAAAATCAATGACAATAAC+TGG + Chr2:35583268-35583287 None:intergenic 25.0%
! ATTGAGTATTTCAATGACAA+GGG - Chr2:35579656-35579675 MsG0280008640.01.T01:intron 25.0%
! ATTGTAACCTCACTTTAATT+TGG + Chr2:35580564-35580583 None:intergenic 25.0%
! CTACTTATCACTTTATTACT+TGG + Chr2:35581534-35581553 None:intergenic 25.0%
! TAATGGGATTTGAACATAAT+GGG - Chr2:35583492-35583511 MsG0280008640.01.T01:CDS 25.0%
! TAATTCCAACAAATGAATAG+AGG + Chr2:35581739-35581758 None:intergenic 25.0%
! TAGTTTGGCAAAAAAAATTC+AGG - Chr2:35583292-35583311 MsG0280008640.01.T01:CDS 25.0%
! TATTGAGTATTTCAATGACA+AGG - Chr2:35579655-35579674 MsG0280008640.01.T01:intron 25.0%
! TCAGATTTAAAAACTTCATC+CGG - Chr2:35582324-35582343 MsG0280008640.01.T01:intron 25.0%
! TTAATGGGATTTGAACATAA+TGG - Chr2:35583491-35583510 MsG0280008640.01.T01:CDS 25.0%
!! AAGTATCAAATACCTTTTTG+GGG + Chr2:35583217-35583236 None:intergenic 25.0%
!! CTTATTTAAAACCTTACTAC+CGG + Chr2:35582346-35582365 None:intergenic 25.0%
!! GATGAAGTTTTTAAATCTGA+TGG + Chr2:35582324-35582343 None:intergenic 25.0%
!!! ATGACTAATTTTAAAACCAG+CGG - Chr2:35581984-35582003 MsG0280008640.01.T01:intron 25.0%
!!! ATTGATTTTCTCATGTAGTT+TGG - Chr2:35583277-35583296 MsG0280008640.01.T01:CDS 25.0%
!!! CAAAGTATCAAATACCTTTT+TGG + Chr2:35583219-35583238 None:intergenic 25.0%
!!! CTATTTAGTTTTACTGTAGT+GGG + Chr2:35582218-35582237 None:intergenic 25.0%
AAAGTGAGGTTACAATTAGT+TGG - Chr2:35580568-35580587 MsG0280008640.01.T01:intron 30.0%
AAGATCAACCAGTAAATCTT+AGG + Chr2:35581960-35581979 None:intergenic 30.0%
AATAAATGAAAACAGGGGTA+AGG + Chr2:35580402-35580421 None:intergenic 30.0%
AATCTATTGCAATTCATGAG+TGG - Chr2:35581359-35581378 MsG0280008640.01.T01:intron 30.0%
ACAATCAACATCAAGATGTT+TGG - Chr2:35581190-35581209 MsG0280008640.01.T01:intron 30.0%
AGGTTTCTTTCACAATGTTA+AGG + Chr2:35580138-35580157 None:intergenic 30.0%
ATAAATGAAAACAGGGGTAA+GGG + Chr2:35580401-35580420 None:intergenic 30.0%
ATATAAAACAAGTGTGTAGC+AGG + Chr2:35583452-35583471 None:intergenic 30.0%
ATCTAAGTGATGAATTCGTA+AGG - Chr2:35581798-35581817 MsG0280008640.01.T01:intron 30.0%
ATCTGATTATCAGGATGTTA+TGG - Chr2:35582957-35582976 MsG0280008640.01.T01:CDS 30.0%
ATGTTAAGGATTTCCTTATC+AGG + Chr2:35580124-35580143 None:intergenic 30.0%
ATTCCAACAAATGAATAGAG+GGG + Chr2:35581737-35581756 None:intergenic 30.0%
CACCATTAACAAGTAAATCT+AGG - Chr2:35582747-35582766 MsG0280008640.01.T01:CDS 30.0%
CCTACAATCAATATCAATGT+TGG + Chr2:35581229-35581248 None:intergenic 30.0%
CTAATCTTACCATCAATACA+CGG + Chr2:35581490-35581509 None:intergenic 30.0%
CTTTCTCCATCATTAATTTC+AGG - Chr2:35582902-35582921 MsG0280008640.01.T01:CDS 30.0%
GAAATACTCAATAGTGACTT+GGG + Chr2:35579648-35579667 None:intergenic 30.0%
GATTCGTATTGTTGTATCTA+GGG - Chr2:35582776-35582795 MsG0280008640.01.T01:CDS 30.0%
GTTACTAACTAATTACTTCC+TGG - Chr2:35582093-35582112 MsG0280008640.01.T01:intron 30.0%
GTTTGATTGCATAATGTTAG+AGG - Chr2:35581692-35581711 MsG0280008640.01.T01:intron 30.0%
TATCAACCTTGATCTTAAGA+GGG - Chr2:35580183-35580202 MsG0280008640.01.T01:intron 30.0%
TCAAGGAAAATCTGATTATC+AGG - Chr2:35582948-35582967 MsG0280008640.01.T01:CDS 30.0%
TGAAATACTCAATAGTGACT+TGG + Chr2:35579649-35579668 None:intergenic 30.0%
TGATTCGTATTGTTGTATCT+AGG - Chr2:35582775-35582794 MsG0280008640.01.T01:CDS 30.0%
TGTTAAGGATTTCCTTATCA+GGG + Chr2:35580123-35580142 None:intergenic 30.0%
! ACCCTAGATTTACTTGTTAA+TGG + Chr2:35582752-35582771 None:intergenic 30.0%
! AGTAGAGTATCTTATTCACA+TGG - Chr2:35581549-35581568 MsG0280008640.01.T01:intron 30.0%
! ATACTGTTTACCGTGATTTT+TGG + Chr2:35582017-35582036 None:intergenic 30.0%
! ATCTTGACACAACATTTTGT+CGG + Chr2:35580518-35580537 None:intergenic 30.0%
! ATTTGTGGATTGTCAAATCT+AGG - Chr2:35582653-35582672 MsG0280008640.01.T01:CDS 30.0%
! CCAACATTGATATTGATTGT+AGG - Chr2:35581226-35581245 MsG0280008640.01.T01:intron 30.0%
! GTGCTAATACAGAGATATTT+TGG + Chr2:35580620-35580639 None:intergenic 30.0%
! TTTGTGGATTGTCAAATCTA+GGG - Chr2:35582654-35582673 MsG0280008640.01.T01:CDS 30.0%
!! ACATAATGGGTTACAGTTAA+TGG - Chr2:35583505-35583524 MsG0280008640.01.T01:CDS 30.0%
!! GTTACAGTTAATGGATTTGA+GGG - Chr2:35583514-35583533 MsG0280008640.01.T01:CDS 30.0%
!! TCATAGCAACACTGTTTTAA+TGG - Chr2:35583475-35583494 MsG0280008640.01.T01:CDS 30.0%
!! TGGTTCAATTTGTTGTTTCA+AGG - Chr2:35582931-35582950 MsG0280008640.01.T01:CDS 30.0%
!!! CATAGCAACACTGTTTTAAT+GGG - Chr2:35583476-35583495 MsG0280008640.01.T01:CDS 30.0%
!!! GCTATTTAGTTTTACTGTAG+TGG + Chr2:35582219-35582238 None:intergenic 30.0%
AAAAACTTCATCCGGTAGTA+AGG - Chr2:35582332-35582351 MsG0280008640.01.T01:intron 35.0%
AAAACTCCATCACTTCACTT+AGG + Chr2:35580320-35580339 None:intergenic 35.0%
AAACAGAACTAGGACTATGA+AGG + Chr2:35583028-35583047 None:intergenic 35.0%
AACAGAACTAGGACTATGAA+GGG + Chr2:35583027-35583046 None:intergenic 35.0%
AAGATCATCATCGATACCTA+CGG - Chr2:35579893-35579912 MsG0280008640.01.T01:intron 35.0%
AATCCCCTCTATTCATTTGT+TGG - Chr2:35581731-35581750 MsG0280008640.01.T01:intron 35.0%
ACAAAAAGACCTGAGGAAAT+TGG - Chr2:35579470-35579489 MsG0280008640.01.T01:intron 35.0%
ACCGTAAGAATCAACAAACA+CGG + Chr2:35580089-35580108 None:intergenic 35.0%
ACTACCTAAGTGACTAAATC+AGG - Chr2:35582165-35582184 MsG0280008640.01.T01:intron 35.0%
ATCAACCTTGATCTTAAGAG+GGG - Chr2:35580184-35580203 MsG0280008640.01.T01:intron 35.0%
ATCAGCTGCAATTTCATCAT+TGG + Chr2:35579744-35579763 None:intergenic 35.0%
ATGAATGTATCACCAAGCTT+AGG + Chr2:35581061-35581080 None:intergenic 35.0%
CACATTTCTACTACGTTAAC+TGG + Chr2:35581261-35581280 None:intergenic 35.0%
CATATGTCGTAAACAGAACT+AGG + Chr2:35583038-35583057 None:intergenic 35.0%
CGGTTGTTTACCAAAAATCA+CGG - Chr2:35582004-35582023 MsG0280008640.01.T01:intron 35.0%
CTACCTAAGTGACTAAATCA+GGG - Chr2:35582166-35582185 MsG0280008640.01.T01:intron 35.0%
CTATCAACCTTGATCTTAAG+AGG - Chr2:35580182-35580201 MsG0280008640.01.T01:intron 35.0%
GCAGCTTATATACAAGTTGT+AGG - Chr2:35580846-35580865 MsG0280008640.01.T01:intron 35.0%
GCATCTAAGAATGAAACTGA+CGG + Chr2:35582811-35582830 None:intergenic 35.0%
TAAATCAGGGTTATGCTTCA+GGG - Chr2:35582179-35582198 MsG0280008640.01.T01:intron 35.0%
TAAATGAAAACAGGGGTAAG+GGG + Chr2:35580400-35580419 None:intergenic 35.0%
TAACCCTGATTTAGTCACTT+AGG + Chr2:35582172-35582191 None:intergenic 35.0%
TAACTTGGTTGCAAGAACAT+GGG + Chr2:35579561-35579580 None:intergenic 35.0%
TAGGCTCACCAGATTTAAAA+AGG - Chr2:35582378-35582397 MsG0280008640.01.T01:intron 35.0%
TAGTAAAGGCTTCTGTTGTT+TGG - Chr2:35581105-35581124 MsG0280008640.01.T01:intron 35.0%
TCACAGATTCAGATGTGTAT+AGG + Chr2:35579151-35579170 None:intergenic 35.0%
TCTCATCTCTATGCAATTTG+TGG - Chr2:35582638-35582657 MsG0280008640.01.T01:CDS 35.0%
TCTGTTGTTCAATGTTGACA+AGG + Chr2:35579415-35579434 None:intergenic 35.0%
TCTTGTTCGTGAAAAGATAC+AGG + Chr2:35581168-35581187 None:intergenic 35.0%
TGATTGCATAATGTTAGAGG+CGG - Chr2:35581695-35581714 MsG0280008640.01.T01:intron 35.0%
TGCAACTTGACAAACTGATT+AGG + Chr2:35581833-35581852 None:intergenic 35.0%
! CTTACTCTCTCAGTTGATTT+CGG - Chr2:35581888-35581907 MsG0280008640.01.T01:intron 35.0%
! GACTTTTGTTGGATCTTTAC+CGG + Chr2:35579951-35579970 None:intergenic 35.0%
! TGAAAGAAACCTTTGACTTC+AGG - Chr2:35580146-35580165 MsG0280008640.01.T01:intron 35.0%
! TTTCTTGATTGGTCAATCTC+TGG + Chr2:35581460-35581479 None:intergenic 35.0%
!! AGATGATGCTGATTTCACAT+GGG - Chr2:35580255-35580274 MsG0280008640.01.T01:intron 35.0%
!! AGTTTCTGCTGCTTTAGTAA+AGG - Chr2:35581091-35581110 MsG0280008640.01.T01:intron 35.0%
!! CAATATCAATGTTGGCTTCA+CGG + Chr2:35581221-35581240 None:intergenic 35.0%
!! GCAAAGAGTATTGTTGCTAA+TGG - Chr2:35580004-35580023 MsG0280008640.01.T01:intron 35.0%
!! GGTTACAGTTAATGGATTTG+AGG - Chr2:35583513-35583532 MsG0280008640.01.T01:CDS 35.0%
!! GTTTTTCAGTCAGCAACATA+TGG - Chr2:35583092-35583111 MsG0280008640.01.T01:CDS 35.0%
!! TAAGTGAAGTGATGGAGTTT+TGG - Chr2:35580319-35580338 MsG0280008640.01.T01:intron 35.0%
!! TCCGTGTTTGTTGATTCTTA+CGG - Chr2:35580085-35580104 MsG0280008640.01.T01:intron 35.0%
!! TTTGTTGATTCTTACGGTAC+CGG - Chr2:35580091-35580110 MsG0280008640.01.T01:intron 35.0%
!! TTTTTGAAGACTGCTGCTTA+TGG - Chr2:35580220-35580239 MsG0280008640.01.T01:intron 35.0%
!!! GGTTTTGTTTCAGATGATGT+TGG - Chr2:35579365-35579384 MsG0280008640.01.T01:intron 35.0%
!!! TCAAATACCTTTTTGGGGTT+TGG + Chr2:35583212-35583231 None:intergenic 35.0%
AAATCAGGGTTATGCTTCAG+GGG - Chr2:35582180-35582199 MsG0280008640.01.T01:intron 40.0%
AACTTGCACAAAGACCAACA+TGG - Chr2:35579265-35579284 MsG0280008640.01.T01:CDS 40.0%
AAGATCCAACAAAAGTCGAC+AGG - Chr2:35579954-35579973 MsG0280008640.01.T01:intron 40.0%
AATAGATCGCCGTGTATTGA+TGG - Chr2:35581478-35581497 MsG0280008640.01.T01:intron 40.0%
ACAGAACTAGGACTATGAAG+GGG + Chr2:35583026-35583045 None:intergenic 40.0%
ACATCTGAATCTGTGAACGA+GGG - Chr2:35579155-35579174 MsG0280008640.01.T01:CDS 40.0%
ACCAAAGACCATAACCATGT+TGG + Chr2:35579282-35579301 None:intergenic 40.0%
ACCAACATGGTTATGGTCTT+TGG - Chr2:35579278-35579297 MsG0280008640.01.T01:CDS 40.0%
ACCCTGGTAGTAAGTACTTA+GGG + Chr2:35582047-35582066 None:intergenic 40.0%
AGACACTATTTGCAGCTTCT+TGG - Chr2:35581422-35581441 MsG0280008640.01.T01:intron 40.0%
AGATTGTTCGTAACACATGC+AGG - Chr2:35579336-35579355 MsG0280008640.01.T01:intron 40.0%
ATCAAGCAGGATGAGGATAT+AGG + Chr2:35582601-35582620 None:intergenic 40.0%
ATGAGGATATAGGAGTTGGA+AGG + Chr2:35582591-35582610 None:intergenic 40.0%
ATGAGTGATCATCTCTTGGT+AGG + Chr2:35583171-35583190 None:intergenic 40.0%
ATGTATCACCAAGCTTAGGA+TGG + Chr2:35581057-35581076 None:intergenic 40.0%
CACAAAGACCAACATGGTTA+TGG - Chr2:35579271-35579290 MsG0280008640.01.T01:CDS 40.0%
CATAAGCTCAGGTGTTTCAT+CGG + Chr2:35579531-35579550 None:intergenic 40.0%
CATGTTCTTGCAACCAAGTT+AGG - Chr2:35579560-35579579 MsG0280008640.01.T01:CDS 40.0%
CCAGTAAATCTTAGGACGTA+AGG + Chr2:35581952-35581971 None:intergenic 40.0%
CCATCTTACAAAAAGACCTG+AGG - Chr2:35579463-35579482 MsG0280008640.01.T01:intron 40.0%
CCTTACGTCCTAAGATTTAC+TGG - Chr2:35581949-35581968 MsG0280008640.01.T01:intron 40.0%
CTAAATCAGGGTTATGCTTC+AGG - Chr2:35582178-35582197 MsG0280008640.01.T01:intron 40.0%
CTAACTTGGTTGCAAGAACA+TGG + Chr2:35579562-35579581 None:intergenic 40.0%
CTCAATTCCAAACCCCAAAA+AGG - Chr2:35583202-35583221 MsG0280008640.01.T01:CDS 40.0%
GAAGATGAGTGATCATCTCT+TGG + Chr2:35583175-35583194 None:intergenic 40.0%
GAATCAACAAACACGGACAA+TGG + Chr2:35580082-35580101 None:intergenic 40.0%
GATATCTACCATCCTAAGCT+TGG - Chr2:35581046-35581065 MsG0280008640.01.T01:intron 40.0%
GGTGACAGATTCATGTAGAT+CGG + Chr2:35582731-35582750 None:intergenic 40.0%
GTGCAAGTTTCCTATGCTAT+CGG - Chr2:35580046-35580065 MsG0280008640.01.T01:intron 40.0%
TAACTGAAGCTACATGTACC+TGG + Chr2:35582987-35583006 None:intergenic 40.0%
TACCCTGGTAGTAAGTACTT+AGG + Chr2:35582048-35582067 None:intergenic 40.0%
TAGTCACTTAGGTAGTGACA+TGG + Chr2:35582161-35582180 None:intergenic 40.0%
TATCTCTGTATTAGCACGGT+TGG - Chr2:35580623-35580642 MsG0280008640.01.T01:intron 40.0%
TCCCTAAGTACTTACTACCA+GGG - Chr2:35582043-35582062 MsG0280008640.01.T01:intron 40.0%
TGAACACCTTGAGCAATATC+AGG + Chr2:35579440-35579459 None:intergenic 40.0%
TGCAACGTTGAGCTTATACA+AGG + Chr2:35580673-35580692 None:intergenic 40.0%
TGGATGGTGCTTACAAATCT+TGG - Chr2:35580339-35580358 MsG0280008640.01.T01:intron 40.0%
TTAAGAGGGGTGGAAATAAC+AGG - Chr2:35580197-35580216 MsG0280008640.01.T01:intron 40.0%
TTCATGAGTGGCAAAAGCTA+AGG - Chr2:35581371-35581390 MsG0280008640.01.T01:intron 40.0%
TTCCTTATCAGGGATCTTTC+CGG + Chr2:35580113-35580132 None:intergenic 40.0%
TTGTGGATTCCTTAGAACAC+TGG + Chr2:35583573-35583592 None:intergenic 40.0%
! AATGGATTTGAGGGAGAAGA+GGG - Chr2:35583523-35583542 MsG0280008640.01.T01:CDS 40.0%
! ACGGCGATCTATTTCTTGAT+TGG + Chr2:35581471-35581490 None:intergenic 40.0%
! CCTCAGGTCTTTTTGTAAGA+TGG + Chr2:35579466-35579485 None:intergenic 40.0%
! GATATTGATTGTAGGTGCGT+GGG - Chr2:35581234-35581253 MsG0280008640.01.T01:intron 40.0%
! GATATTGCTCAAGGTGTTCA+TGG - Chr2:35579440-35579459 MsG0280008640.01.T01:intron 40.0%
! GGAAGATGGTTTTCTCATCA+AGG + Chr2:35579808-35579827 None:intergenic 40.0%
! GTTGCAAGAACATGGGTTAA+AGG + Chr2:35579554-35579573 None:intergenic 40.0%
! TCTCATCAAGGTACTTCTCT+GGG + Chr2:35579796-35579815 None:intergenic 40.0%
! TGATATTGATTGTAGGTGCG+TGG - Chr2:35581233-35581252 MsG0280008640.01.T01:intron 40.0%
! TTCTCATCAAGGTACTTCTC+TGG + Chr2:35579797-35579816 None:intergenic 40.0%
!! ACTGCTGCTTATGGACATTT+TGG - Chr2:35580229-35580248 MsG0280008640.01.T01:intron 40.0%
!! AGGTATCGATGATGATCTTG+CGG + Chr2:35579892-35579911 None:intergenic 40.0%
!! AGGTTGATAGAGATCATTCC+TGG + Chr2:35580172-35580191 None:intergenic 40.0%
!! GAGATGATGCTGATTTCACA+TGG - Chr2:35580254-35580273 MsG0280008640.01.T01:intron 40.0%
!! TAATGGATTTGAGGGAGAAG+AGG - Chr2:35583522-35583541 MsG0280008640.01.T01:CDS 40.0%
!! TTGCTAATGGACTTGCTAGA+AGG - Chr2:35580017-35580036 MsG0280008640.01.T01:intron 40.0%
!!! GATTTTTGGTAAACAACCGC+TGG + Chr2:35582003-35582022 None:intergenic 40.0%
!!! TGAAGTGATGGAGTTTTGGA+TGG - Chr2:35580323-35580342 MsG0280008640.01.T01:intron 40.0%
AACCTTGATCTTAAGAGGGG+TGG - Chr2:35580187-35580206 MsG0280008640.01.T01:intron 45.0%
AGAAGAGGGATGAAGAGTTG+AGG - Chr2:35583537-35583556 MsG0280008640.01.T01:CDS 45.0%
AGAGTAAGACCACGCACTTA+AGG + Chr2:35581876-35581895 None:intergenic 45.0%
AGATAAGGACGGTATGGACA+CGG + Chr2:35579697-35579716 None:intergenic 45.0%
AGCTGAAATGTGTGTGGGTT+TGG + Chr2:35582452-35582471 None:intergenic 45.0%
AGGATATAGGAGTTGGAAGG+TGG + Chr2:35582588-35582607 None:intergenic 45.0%
AGTGAGCTTAGCTCCTAACT+TGG + Chr2:35579576-35579595 None:intergenic 45.0%
ATCATCATCGATACCTACGG+TGG - Chr2:35579896-35579915 MsG0280008640.01.T01:intron 45.0%
ATCTTAGGACGTAAGGAGTG+TGG + Chr2:35581945-35581964 None:intergenic 45.0%
ATCTTCCACTTGAACCCTTC+AGG - Chr2:35579821-35579840 MsG0280008640.01.T01:intron 45.0%
CACATCTGAATCTGTGAACG+AGG - Chr2:35579154-35579173 MsG0280008640.01.T01:CDS 45.0%
CAGAGTCCTGATATTGCTCA+AGG - Chr2:35579431-35579450 MsG0280008640.01.T01:intron 45.0%
CAGGATGAGGATATAGGAGT+TGG + Chr2:35582595-35582614 None:intergenic 45.0%
CGTAACACATGCAGGAACAT+AGG - Chr2:35579344-35579363 MsG0280008640.01.T01:intron 45.0%
CTCAAGGCAAGCATCAAGAA+CGG + Chr2:35579216-35579235 None:intergenic 45.0%
CTCACTGAAGTTCGCAAGAA+CGG - Chr2:35579590-35579609 MsG0280008640.01.T01:CDS 45.0%
CTCATCCTGCTTGATGCTTT+GGG - Chr2:35582606-35582625 MsG0280008640.01.T01:CDS 45.0%
CTCCCTAAGTACTTACTACC+AGG - Chr2:35582042-35582061 MsG0280008640.01.T01:intron 45.0%
CTGGTAGTAAGTACTTAGGG+AGG + Chr2:35582044-35582063 None:intergenic 45.0%
GAAGTTGTGAAGCCACTCAA+GGG - Chr2:35580277-35580296 MsG0280008640.01.T01:intron 45.0%
GACTACTCACCAGTGTTCTA+AGG - Chr2:35583561-35583580 MsG0280008640.01.T01:CDS 45.0%
GCATAATGTTAGAGGCGGTT+AGG - Chr2:35581700-35581719 MsG0280008640.01.T01:intron 45.0%
GGTCATTCAGCTCACAGAAT+GGG - Chr2:35583136-35583155 MsG0280008640.01.T01:CDS 45.0%
GGTGATCAAGGTCACATGTT+CGG - Chr2:35579497-35579516 MsG0280008640.01.T01:intron 45.0%
GTAGATATCTACGAACCTCC+AGG + Chr2:35581035-35581054 None:intergenic 45.0%
GTGATCAAGGTCACATGTTC+GGG - Chr2:35579498-35579517 MsG0280008640.01.T01:intron 45.0%
GTGCTGTGTTGAGATAAGGA+CGG + Chr2:35579708-35579727 None:intergenic 45.0%
GTGTTGAGATAAGGACGGTA+TGG + Chr2:35579703-35579722 None:intergenic 45.0%
GTTCGTGAAAAGATACAGGC+TGG + Chr2:35581164-35581183 None:intergenic 45.0%
TACCGGAAAGATCCCTGATA+AGG - Chr2:35580108-35580127 MsG0280008640.01.T01:intron 45.0%
TCAGGATGTTATGGTCTTCC+AGG - Chr2:35582966-35582985 MsG0280008640.01.T01:CDS 45.0%
TCAGTCAGCAACATATGGCA+AGG - Chr2:35583097-35583116 MsG0280008640.01.T01:CDS 45.0%
TGAAGGGTTCAAGTGGAAGA+TGG + Chr2:35579822-35579841 None:intergenic 45.0%
TTCCACCCCTCTTAAGATCA+AGG + Chr2:35580192-35580211 None:intergenic 45.0%
TTCCATCAGGTCTCAACCAA+GGG + Chr2:35579622-35579641 None:intergenic 45.0%
TTTCCATCAGGTCTCAACCA+AGG + Chr2:35579623-35579642 None:intergenic 45.0%
! GGGTTTGGAATTGAGCAAAG+AGG + Chr2:35583197-35583216 None:intergenic 45.0%
! TCACATGCAACTTTGCTGTC+TGG + Chr2:35579245-35579264 None:intergenic 45.0%
! TGGGTTAAAGGCATAAGCTC+AGG + Chr2:35579542-35579561 None:intergenic 45.0%
!! GAAATTGGTGCTGGTGATCA+AGG - Chr2:35579485-35579504 MsG0280008640.01.T01:intron 45.0%
!! TTTCAATGACAAGGGTGCCA+TGG - Chr2:35579664-35579683 MsG0280008640.01.T01:intron 45.0%
!! ATAAATAAATAAATAAGATA+AGG - Chr2:35581622-35581641 MsG0280008640.01.T01:intron 5.0%
!! TAAATAAATAAATAAGATAA+GGG - Chr2:35581623-35581642 MsG0280008640.01.T01:intron 5.0%
AACAGGTGCTTAACAGACGG+AGG + Chr2:35581920-35581939 None:intergenic 50.0%
AATACTCCCTTGCAACCTGG+AGG - Chr2:35581017-35581036 MsG0280008640.01.T01:intron 50.0%
ACAAACACGGACAATGGCTC+TGG + Chr2:35580076-35580095 None:intergenic 50.0%
ACAGGTGCTTAACAGACGGA+GGG + Chr2:35581919-35581938 None:intergenic 50.0%
AGACCTGAGGAAATTGGTGC+TGG - Chr2:35579476-35579495 MsG0280008640.01.T01:intron 50.0%
AGCAGGAGTTAGCATGGTGA+CGG + Chr2:35583435-35583454 None:intergenic 50.0%
AGTGTCTTGCTCTTCTGCAG+AGG + Chr2:35581409-35581428 None:intergenic 50.0%
ATCGATACCTACGGTGGTTG+GGG - Chr2:35579902-35579921 MsG0280008640.01.T01:intron 50.0%
ATCGATGATGATCTTGCGGC+CGG + Chr2:35579888-35579907 None:intergenic 50.0%
ATCTGGTCGCAAAGCTTGTC+GGG + Chr2:35579185-35579204 None:intergenic 50.0%
CAAGAACGGCATCAGAGATC+TGG + Chr2:35579202-35579221 None:intergenic 50.0%
CACAGTGATCCTTAAGTGCG+TGG - Chr2:35581864-35581883 MsG0280008640.01.T01:intron 50.0%
CATCGATACCTACGGTGGTT+GGG - Chr2:35579901-35579920 MsG0280008640.01.T01:intron 50.0%
CATTCCTGGCCTGAAGTCAA+AGG + Chr2:35580158-35580177 None:intergenic 50.0%
CCAACAAAAGTCGACAGGAG+TGG - Chr2:35579959-35579978 MsG0280008640.01.T01:intron 50.0%
CCACTGCCTAAGTGAAGTGA+TGG - Chr2:35580311-35580330 MsG0280008640.01.T01:intron 50.0%
CCATCACTTCACTTAGGCAG+TGG + Chr2:35580314-35580333 None:intergenic 50.0%
CCTCATCCTGCTTGATGCTT+TGG - Chr2:35582605-35582624 MsG0280008640.01.T01:CDS 50.0%
CGTCGTGCTGTGTTGAGATA+AGG + Chr2:35579712-35579731 None:intergenic 50.0%
GATCTGGTCGCAAAGCTTGT+CGG + Chr2:35579186-35579205 None:intergenic 50.0%
GCCAACAGGTGCTTAACAGA+CGG + Chr2:35581923-35581942 None:intergenic 50.0%
GCTAACTTTCCACCCTTGAG+TGG + Chr2:35580292-35580311 None:intergenic 50.0%
GCTAATACTCCCTTGCAACC+TGG - Chr2:35581014-35581033 MsG0280008640.01.T01:intron 50.0%
GGAAGTTGTGAAGCCACTCA+AGG - Chr2:35580276-35580295 MsG0280008640.01.T01:intron 50.0%
GGGTCATTCAGCTCACAGAA+TGG - Chr2:35583135-35583154 MsG0280008640.01.T01:CDS 50.0%
GTGTGTAGCAGGAGTTAGCA+TGG + Chr2:35583441-35583460 None:intergenic 50.0%
TACCAGGGTAAGCTCGCTTT+CGG - Chr2:35582058-35582077 MsG0280008640.01.T01:intron 50.0%
TACGAACCTCCAGGTTGCAA+GGG + Chr2:35581026-35581045 None:intergenic 50.0%
TCACCAGCACCAATTTCCTC+AGG + Chr2:35579482-35579501 None:intergenic 50.0%
TCATCGATACCTACGGTGGT+TGG - Chr2:35579900-35579919 MsG0280008640.01.T01:intron 50.0%
TCCGTCTGTTAAGCACCTGT+TGG - Chr2:35581919-35581938 MsG0280008640.01.T01:intron 50.0%
TCGCGAGCTGAAATGTGTGT+GGG + Chr2:35582457-35582476 None:intergenic 50.0%
TGCTGTCTGGATCTTGCTCA+AGG + Chr2:35579232-35579251 None:intergenic 50.0%
TTCTGCAGAGGCTGGGTATA+AGG + Chr2:35581397-35581416 None:intergenic 50.0%
! CAACACCCAAAGCATCAAGC+AGG + Chr2:35582614-35582633 None:intergenic 50.0%
! CCAAAGCATCAAGCAGGATG+AGG + Chr2:35582608-35582627 None:intergenic 50.0%
! GAAACCTTTGACTTCAGGCC+AGG - Chr2:35580151-35580170 MsG0280008640.01.T01:intron 50.0%
! GTGACTTGGGTCTTTCCATC+AGG + Chr2:35579635-35579654 None:intergenic 50.0%
! GTTTGTCAAGTTGCACCTGC+TGG - Chr2:35581838-35581857 MsG0280008640.01.T01:intron 50.0%
!! AATCGCAGCAAGGTGTTGTG+CGG + Chr2:35582565-35582584 None:intergenic 50.0%
!! AGGTACTTCTCTGGGATCAC+AGG + Chr2:35579788-35579807 None:intergenic 50.0%
!! CTCTGGAACACCGATAGCAT+AGG + Chr2:35580059-35580078 None:intergenic 50.0%
!! GATGATGGTGGTGGTTGTTG+TGG + Chr2:35583590-35583609 None:intergenic 50.0%
!!! CCACTCCTGTCGACTTTTGT+TGG + Chr2:35579962-35579981 None:intergenic 50.0%
AACCGAAAGCGAGCTTACCC+TGG + Chr2:35582063-35582082 None:intergenic 55.0%
AACGGCCTGAAGGGTTCAAG+TGG + Chr2:35579829-35579848 None:intergenic 55.0%
AGGAATCTAGGAGGAGGTGG+TGG + Chr2:35582523-35582542 None:intergenic 55.0%
AGGACGGTATGGACACGGAT+CGG + Chr2:35579692-35579711 None:intergenic 55.0%
AGGTGAGGGAGGAATCTAGG+AGG + Chr2:35582532-35582551 None:intergenic 55.0%
ATGGACACGGATCGGAACCA+TGG + Chr2:35579684-35579703 None:intergenic 55.0%
CCTTCAGGCCGTTTCGTCAT+CGG - Chr2:35579836-35579855 MsG0280008640.01.T01:intron 55.0%
CGATGACGAAACGGCCTGAA+GGG + Chr2:35579838-35579857 None:intergenic 55.0%
CTACGAACCTCCAGGTTGCA+AGG + Chr2:35581027-35581046 None:intergenic 55.0%
CTTGCTCTTCTGCAGAGGCT+GGG + Chr2:35581404-35581423 None:intergenic 55.0%
GAGGACCACCGATGACGAAA+CGG + Chr2:35579847-35579866 None:intergenic 55.0%
GCAAGAACGGAACATGCCCT+TGG - Chr2:35579603-35579622 MsG0280008640.01.T01:CDS 55.0%
GTCGCGAGCTGAAATGTGTG+TGG + Chr2:35582458-35582477 None:intergenic 55.0%
GTTGTGAAGCCACTCAAGGG+TGG - Chr2:35580280-35580299 MsG0280008640.01.T01:intron 55.0%
TCTGGTCGCAAAGCTTGTCG+GGG + Chr2:35579184-35579203 None:intergenic 55.0%
TCTTGCTCTTCTGCAGAGGC+TGG + Chr2:35581405-35581424 None:intergenic 55.0%
TGAGGGAGGAATCTAGGAGG+AGG + Chr2:35582529-35582548 None:intergenic 55.0%
TGCCCTTGGTTGAGACCTGA+TGG - Chr2:35579617-35579636 MsG0280008640.01.T01:CDS 55.0%
TGGAAGGTGGAATCGCAGCA+AGG + Chr2:35582575-35582594 None:intergenic 55.0%
TGGAGGTGAGGGAGGAATCT+AGG + Chr2:35582535-35582554 None:intergenic 55.0%
TTCGTCATCGGTGGTCCTCA+CGG - Chr2:35579848-35579867 MsG0280008640.01.T01:intron 55.0%
! ACGTAAGGAGTGTGGCCAAC+AGG + Chr2:35581937-35581956 None:intergenic 55.0%
AGGATCACTGTGCGACCAGC+AGG + Chr2:35581856-35581875 None:intergenic 60.0%
CCGATGACGAAACGGCCTGA+AGG + Chr2:35579839-35579858 None:intergenic 60.0%
GGGAGGAATCTAGGAGGAGG+TGG + Chr2:35582526-35582545 None:intergenic 60.0%
GTTAGACCAGCGTCACCGTG+AGG + Chr2:35579866-35579885 None:intergenic 60.0%
TACGGTGGTTGGGGTGCACA+CGG - Chr2:35579911-35579930 MsG0280008640.01.T01:intron 60.0%
TCAGGCCGTTTCGTCATCGG+TGG - Chr2:35579839-35579858 MsG0280008640.01.T01:intron 60.0%
! CACGGTGACGCTGGTCTAAC+CGG - Chr2:35579866-35579885 MsG0280008640.01.T01:intron 60.0%
! CACGGTGGTGGTGCTTTCTC+CGG - Chr2:35579929-35579948 MsG0280008640.01.T01:intron 60.0%
! CTAGGAGGAGGTGGTGGTGA+TGG + Chr2:35582517-35582536 None:intergenic 60.0%
GTGTGCACCCCAACCACCGT+AGG + Chr2:35579912-35579931 None:intergenic 65.0%
!! CAGCAAGGTGTTGTGCGGCG+CGG + Chr2:35582560-35582579 None:intergenic 65.0%
!! GGAGGAGGTGGTGGTGATGG+AGG + Chr2:35582514-35582533 None:intergenic 65.0%
GGTGGTCCTCACGGTGACGC+TGG - Chr2:35579857-35579876 MsG0280008640.01.T01:intron 70.0%
GGTGGTTGGGGTGCACACGG+TGG - Chr2:35579914-35579933 MsG0280008640.01.T01:intron 70.0%
GGTTGGGGTGCACACGGTGG+TGG - Chr2:35579917-35579936 MsG0280008640.01.T01:intron 70.0%
! AGGTGTTGTGCGGCGCGGCT+TGG + Chr2:35582555-35582574 None:intergenic 70.0%
! TGTTGTGCGGCGCGGCTTGG+AGG + Chr2:35582552-35582571 None:intergenic 70.0%
! GCGCGGCTTGGAGGTGAGGG+AGG + Chr2:35582543-35582562 None:intergenic 75.0%
! GCGGCGCGGCTTGGAGGTGA+GGG + Chr2:35582546-35582565 None:intergenic 75.0%
! TGCGGCGCGGCTTGGAGGTG+AGG + Chr2:35582547-35582566 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr2 gene 35579131 35583616 35579131 ID=MsG0280008640.01;Name=MsG0280008640.01
Chr2 mRNA 35579131 35583616 35579131 ID=MsG0280008640.01.T01;Parent=MsG0280008640.01;Name=MsG0280008640.01.T01;_AED=0.49;_eAED=0.56;_QI=0|0.33|0.5|1|1|1|4|0|522
Chr2 exon 35582442 35583616 35582442 ID=MsG0280008640.01.T01:exon:36168;Parent=MsG0280008640.01.T01
Chr2 exon 35579760 35579823 35579760 ID=MsG0280008640.01.T01:exon:36167;Parent=MsG0280008640.01.T01
Chr2 exon 35579524 35579646 35579524 ID=MsG0280008640.01.T01:exon:36166;Parent=MsG0280008640.01.T01
Chr2 exon 35579131 35579337 35579131 ID=MsG0280008640.01.T01:exon:36165;Parent=MsG0280008640.01.T01
Chr2 CDS 35582442 35583616 35582442 ID=MsG0280008640.01.T01:cds;Parent=MsG0280008640.01.T01
Chr2 CDS 35579760 35579823 35579760 ID=MsG0280008640.01.T01:cds;Parent=MsG0280008640.01.T01
Chr2 CDS 35579524 35579646 35579524 ID=MsG0280008640.01.T01:cds;Parent=MsG0280008640.01.T01
Chr2 CDS 35579131 35579337 35579131 ID=MsG0280008640.01.T01:cds;Parent=MsG0280008640.01.T01
Gene Sequence

>MsG0280008640.01.T01

ATGGCAACAGAAACTTTCCTATACACATCTGAATCTGTGAACGAGGGACACCCCGACAAGCTTTGCGACCAGATCTCTGATGCCGTTCTTGATGCTTGCCTTGAGCAAGATCCAGACAGCAAAGTTGCATGTGAAACTTGCACAAAGACCAACATGGTTATGGTCTTTGGTGAGATCACAACAAAAGCAAATGTTGACTATGAAAAGATTGTTCGTAACACATGCAGGAACATAGGTTTTGTTTCAGATGATGTTGGTCTTGATGCTGACAACTGCAAAGTCCTTGTCAACATTGAACAACAGAGTCCTGATATTGCTCAAGGTGTTCATGGCCATCTTACAAAAAGACCTGAGGAAATTGGTGCTGGTGATCAAGGTCACATGTTCGGGTATGCTACCGATGAAACACCTGAGCTTATGCCTTTAACCCATGTTCTTGCAACCAAGTTAGGAGCTAAGCTCACTGAAGTTCGCAAGAACGGAACATGCCCTTGGTTGAGACCTGATGGAAAGACCCAAGTCACTATTGAGTATTTCAATGACAAGGGTGCCATGGTTCCGATCCGTGTCCATACCGTCCTTATCTCAACACAGCACGACGAAACTGTGACCAATGATGAAATTGCAGCTGATTTGAAACAACATGTGATCAAGCCTGTGATCCCAGAGAAGTACCTTGATGAGAAAACCATCTTCCACTTGAACCCTTCAGGCCGTTTCGTCATCGGTGGTCCTCACGGTGACGCTGGTCTAACCGGCCGCAAGATCATCATCGATACCTACGGTGGTTGGGGTGCACACGGTGGTGGTGCTTTCTCCGGTAAAGATCCAACAAAAGTCGACAGGAGTGGAGCTTACATCGTGAGACAAGCTGCAAAGAGTATTGTTGCTAATGGACTTGCTAGAAGGTGCATTGTGCAAGTTTCCTATGCTATCGGTGTTCCAGAGCCATTGTCCGTGTTTGTTGATTCTTACGGTACCGGAAAGATCCCTGATAAGGAAATCCTTAACATTGTGAAAGAAACCTTTGACTTCAGGCCAGGAATGATCTCTATCAACCTTGATCTTAAGAGGGGTGGAAATAACAGGTTTTTGAAGACTGCTGCTTATGGACATTTTGGTAGAGATGATGCTGATTTCACATGGGAAGTTGTGAAGCCACTCAAGGGTGGAAAGTATAATTGGTTCAATTTGTTGTTTCAAGGAAAATCTGATTATCAGGATGTTATGGTCTTCCAGTCAGCAACATATGGCAAGGTTCTTGTTTTGGATGGGGTCATTCAGCTCACAGAATGGGACGAGTGTGCCTACCAAGAGATGATCACTCATCTTCCTCTTTGCTCAATTCCAAACCCCAAAAAGGTTACTCATAATGTTAATGTGTCCGTCACCATGCTAACTCCTGCTACACACTTGTTTTATATTCATCATAGCAACACTGTTTTAATGGGATTTGAACATAATGGGTTACAGTTAATGGATTTGAGGGAGAAGAGGGATGAAGAGTTGAGGCGACTACTCACCAGTGTTCTAAGGAATCCACAACAACCACCACCATCATCTTCTTAA
Protein sequence

>MsG0280008640.01.T01

MATETFLYTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRNTCRNIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLTHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTIEYFNDKGAMVPIRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILNIVKETFDFRPGMISINLDLKRGGNNRFLKTAAYGHFGRDDADFTWEVVKPLKGGKYNWFNLLFQGKSDYQDVMVFQSATYGKVLVLDGVIQLTEWDECAYQEMITHLPLCSIPNPKKVTHNVNVSVTMLTPATHLFYIHHSNTVLMGFEHNGLQLMDLREKRDEELRRLLTSVLRNPQQPPPSSS*