AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280008911.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280008911.01.T01 MTR_2g460780 97.285 221 6 0 1 221 1 221 5.87e-159 441
MsG0280008911.01.T01 MTR_2g460780 94.570 221 6 1 1 221 1 215 1.11e-151 422
MsG0280008911.01.T01 MTR_2g460780 90.950 221 6 1 1 221 1 207 2.26e-144 403
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280008911.01.T01 AT5G57950 60.987 223 83 3 1 221 1 221 2.40e-90 267
MsG0280008911.01.T01 AT5G57950 60.987 223 83 3 1 221 30 250 5.72e-90 267

Find 78 sgRNAs with CRISPR-Local

Find 346 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATAACAAATAACAAAATAAT+TGG 0.204859 2:+41464373 None:intergenic
TTGGCAAGGCAGAGGTTTAC+TGG 0.266830 2:-41464411 MsG0280008911.01.T01:CDS
CCTGGCGCCCCTGGACTTTC+CGG 0.273188 2:-41466359 MsG0280008911.01.T01:CDS
GGAAGGTTAGATGAAAAGTT+AGG 0.296745 2:-41466520 MsG0280008911.01.T01:five_prime_UTR
ACGATCAAAATAAACTAAAA+AGG 0.317401 2:+41462281 None:intergenic
TTGTTTGACCCATGCTCGAC+TGG 0.343385 2:+41464492 None:intergenic
TCTCAATTCCCTGGCGCCCC+TGG 0.352289 2:-41466368 MsG0280008911.01.T01:CDS
CTCAGAATCAATTAGATTGC+CGG 0.364511 2:+41466340 None:intergenic
AACAAGTGGAACGTCGATAT+CGG 0.371561 2:+41466224 None:intergenic
TTAGATGAAAAGTTAGGGTT+TGG 0.375084 2:-41466514 MsG0280008911.01.T01:five_prime_UTR
GCATCTACAAGATCCGAAAA+TGG 0.385894 2:+41462476 None:intergenic
AGCAGAAACAAGATCTCTAA+TGG 0.389792 2:-41466441 MsG0280008911.01.T01:CDS
TAACAGCTGACCTTTGATTA+TGG 0.390386 2:-41462335 MsG0280008911.01.T01:three_prime_UTR
ACATCCACATCCATCGAGTT+GGG 0.410980 2:+41464662 None:intergenic
ACCCATGCTCGACTGGGCCT+CGG 0.418523 2:+41464499 None:intergenic
CCGGAAAGTCCAGGGGCGCC+AGG 0.421638 2:+41466359 None:intergenic
GAAGGTTAGATGAAAAGTTA+GGG 0.429600 2:-41466519 MsG0280008911.01.T01:five_prime_UTR
GCTCGTCTTTCTCAATTCCC+TGG 0.439681 2:-41466377 MsG0280008911.01.T01:CDS
GTGATCGTTTGTTTCTTCTC+CGG 0.447543 2:-41462434 MsG0280008911.01.T01:CDS
TTCCGAGGCCCAGTCGAGCA+TGG 0.452146 2:-41464501 MsG0280008911.01.T01:CDS
TGAAAATTTGCTCCATAGGT+TGG 0.465291 2:-41464525 MsG0280008911.01.T01:CDS
AAATTTGGCAACGTCGAAGC+AGG 0.480789 2:-41464548 MsG0280008911.01.T01:CDS
AGATGCATCACCAGCGGTAG+AGG 0.486723 2:-41464600 MsG0280008911.01.T01:CDS
TAACAAATAACAAAATAATT+GGG 0.487430 2:+41464374 None:intergenic
ATTAGATTGCCGGAAAGTCC+AGG 0.487468 2:+41466350 None:intergenic
ATCTCGTCAACCACTGCAAA+GGG 0.491382 2:+41464626 None:intergenic
CCTCTGCCTTGCCAAGTCCT+AGG 0.496210 2:+41464419 None:intergenic
CGGCAATCTAATTGATTCTG+AGG 0.497483 2:-41466339 MsG0280008911.01.T01:intron
TTCCGCTAAGACAATGATGA+TGG 0.500406 2:-41464761 MsG0280008911.01.T01:intron
GTAGAGGATGGTTTACAGCT+TGG 0.500978 2:-41464584 MsG0280008911.01.T01:CDS
GGGCCTCGGAAGCCAACCTA+TGG 0.501119 2:+41464513 None:intergenic
CAGGTGAAAATTTGCTCCAT+AGG 0.501246 2:-41464529 MsG0280008911.01.T01:CDS
TGGCAAGGCAGAGGTTTACT+GGG 0.504955 2:-41464410 MsG0280008911.01.T01:CDS
CTCGATGGATGTGGATGTCT+TGG 0.513868 2:-41464657 MsG0280008911.01.T01:CDS
ATACAAAGACAAGTCACAAA+AGG 0.520389 2:+41462398 None:intergenic
ATTAATCTTATCAGTTATGT+CGG 0.522206 2:+41466158 None:intergenic
TCCGAGGCCCAGTCGAGCAT+GGG 0.530910 2:-41464500 MsG0280008911.01.T01:CDS
GACATCCACATCCATCGAGT+TGG 0.533268 2:+41464661 None:intergenic
CCTTGCCTCATGATGACAAC+AGG 0.536038 2:+41464467 None:intergenic
GCTCCATAGGTTGGCTTCCG+AGG 0.537445 2:-41464516 MsG0280008911.01.T01:CDS
AAAAGGTCAAGAACAAATTC+CGG 0.543057 2:+41462415 None:intergenic
TTGGATGGATGTAAAAGGAA+TGG 0.544740 2:-41462236 MsG0280008911.01.T01:three_prime_UTR
AATAACAAAATAATTGGGAC+AGG 0.549596 2:+41464379 None:intergenic
GATGTAAAAGGAATGGGAAA+CGG 0.549712 2:-41462229 MsG0280008911.01.T01:three_prime_UTR
TTTATGATTTCCAAGTCTTG+AGG 0.549764 2:+41466113 None:intergenic
TGTTTGACCCATGCTCGACT+GGG 0.552241 2:+41464493 None:intergenic
CGTCGTTCAGCTCGAACAAG+TGG 0.560165 2:+41466210 None:intergenic
CCTAGGACTTGGCAAGGCAG+AGG 0.560284 2:-41464419 MsG0280008911.01.T01:CDS
AAAGCAGAGTAGAAGAAGAA+TGG 0.567060 2:-41466480 MsG0280008911.01.T01:exon
CAGAGTAGAAGAAGAATGGT+GGG 0.571601 2:-41466476 MsG0280008911.01.T01:exon
TGTAAACCATCCTCTACCGC+TGG 0.574232 2:+41464590 None:intergenic
CGGAAAGTCCAGGGGCGCCA+GGG 0.574777 2:+41466360 None:intergenic
TATCTCGTCAACCACTGCAA+AGG 0.575740 2:+41464625 None:intergenic
TAACTGTTACACCTAGGACT+TGG 0.577662 2:-41464430 MsG0280008911.01.T01:CDS
CATCCACATCCATCGAGTTG+GGG 0.579168 2:+41464663 None:intergenic
TGGATGGATGTAAAAGGAAT+GGG 0.584263 2:-41462235 MsG0280008911.01.T01:three_prime_UTR
TTAGATTGCCGGAAAGTCCA+GGG 0.588856 2:+41466351 None:intergenic
AATAAATACAAAGGGAACGC+AGG 0.591051 2:-41466560 None:intergenic
CAAGATCTCTAATGGATAAG+CGG 0.592560 2:-41466433 MsG0280008911.01.T01:CDS
AACAGTTTCTGCAGTAGATG+AGG 0.592840 2:+41464724 None:intergenic
GGTTAGTAGACCCTTTGCAG+TGG 0.593357 2:-41464636 MsG0280008911.01.T01:CDS
TGCTGAGTGTGTCGTAATGT+TGG 0.599036 2:-41462456 MsG0280008911.01.T01:CDS
GCATCACCAGCGGTAGAGGA+TGG 0.605132 2:-41464596 MsG0280008911.01.T01:CDS
CAATACCTGTTGTCATCATG+AGG 0.605657 2:-41464472 MsG0280008911.01.T01:CDS
TGATAGATAGATATTTCAGA+TGG 0.622572 2:-41462358 MsG0280008911.01.T01:three_prime_UTR
GCAGAGTAGAAGAAGAATGG+TGG 0.622593 2:-41466477 MsG0280008911.01.T01:exon
CAGCTGACCTTTGATTATGG+TGG 0.622700 2:-41462332 MsG0280008911.01.T01:three_prime_UTR
CCTGTTGTCATCATGAGGCA+AGG 0.626933 2:-41464467 MsG0280008911.01.T01:CDS
TAATTGACCACCATAATCAA+AGG 0.636905 2:+41462325 None:intergenic
TAAAAGGAATGGGAAACGGA+AGG 0.636992 2:-41462225 MsG0280008911.01.T01:three_prime_UTR
GTTACACCTAGGACTTGGCA+AGG 0.647181 2:-41464425 MsG0280008911.01.T01:CDS
CTCACAAGGACATTCTGTGA+TGG 0.663425 2:+41464692 None:intergenic
ATCCACATCCATCGAGTTGG+GGG 0.663720 2:+41464664 None:intergenic
TCAACTTAACTGTTACACCT+AGG 0.680007 2:-41464436 MsG0280008911.01.T01:CDS
TAGATTGCCGGAAAGTCCAG+GGG 0.688081 2:+41466352 None:intergenic
GGCAAGGCAGAGGTTTACTG+GGG 0.698130 2:-41464409 MsG0280008911.01.T01:CDS
GATAGCAGATGCATCACCAG+CGG 0.721340 2:-41464606 MsG0280008911.01.T01:CDS
GGAACGTCGATATCGGAACG+AGG 0.736140 2:+41466231 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAACAAATAACAAAATAAT+TGG + Chr2:41464400-41464419 None:intergenic 10.0%
!! TAACAAATAACAAAATAATT+GGG + Chr2:41464399-41464418 None:intergenic 10.0%
!!! TCATTTTCTTAAATTATTAT+TGG + Chr2:41462747-41462766 None:intergenic 10.0%
!! AACTTCAAAAATATCAATAA+TGG + Chr2:41463150-41463169 None:intergenic 15.0%
!! ATTCATAATATGAAACAAAA+GGG + Chr2:41463545-41463564 None:intergenic 15.0%
!! TATTCATAATATGAAACAAA+AGG + Chr2:41463546-41463565 None:intergenic 15.0%
!! TATTTATATAAGAATCTGTT+AGG + Chr2:41465104-41465123 None:intergenic 15.0%
!! TCTAGTATTAAATTTATTAG+TGG - Chr2:41463627-41463646 MsG0280008911.01.T01:intron 15.0%
!! TTAGAGAAAAAAAAAAAAGT+CGG + Chr2:41465330-41465349 None:intergenic 15.0%
!! TTATATATGAAAAGCTTAAT+AGG + Chr2:41463119-41463138 None:intergenic 15.0%
!!! ACTTCTAATATTTTTACTTT+TGG - Chr2:41465202-41465221 MsG0280008911.01.T01:intron 15.0%
!!! GTTATTGTTTTACTATTTAT+AGG + Chr2:41462904-41462923 None:intergenic 15.0%
!!! TACTCTTTTGTTTTTTAATT+CGG + Chr2:41464726-41464745 None:intergenic 15.0%
!!! TTTATTTTTCCTTTTCTAAT+CGG - Chr2:41465520-41465539 MsG0280008911.01.T01:intron 15.0%
!!! TTTGAAAAAAAATGGTATTT+TGG - Chr2:41465676-41465695 MsG0280008911.01.T01:intron 15.0%
!! ACGATCAAAATAAACTAAAA+AGG + Chr2:41466492-41466511 None:intergenic 20.0%
!! AGATTTCTATGTAGAATAAA+TGG + Chr2:41464547-41464566 None:intergenic 20.0%
!! AGCATTAAAAGGTTTATATA+TGG - Chr2:41466062-41466081 MsG0280008911.01.T01:intron 20.0%
!! ATAAACTCTGTTCTAATTAT+GGG - Chr2:41466153-41466172 MsG0280008911.01.T01:CDS 20.0%
!! ATTAATCTTATCAGTTATGT+CGG + Chr2:41462615-41462634 None:intergenic 20.0%
!! GAAAATTAGACTAAAGAATT+AGG + Chr2:41464846-41464865 None:intergenic 20.0%
!! TAAAGCCTATTTAATTAAAC+AGG - Chr2:41463048-41463067 MsG0280008911.01.T01:intron 20.0%
!! TAAATAATGAATTCTTACGA+AGG + Chr2:41463238-41463257 None:intergenic 20.0%
!! TATAAACTCTGTTCTAATTA+TGG - Chr2:41466152-41466171 MsG0280008911.01.T01:CDS 20.0%
!! TTATTTAGTAGCTGATATAT+TGG - Chr2:41463202-41463221 MsG0280008911.01.T01:intron 20.0%
!!! ATATATAAACCTTTTAATGC+TGG + Chr2:41466063-41466082 None:intergenic 20.0%
!!! ATATTTTCTACATGTATGAT+CGG + Chr2:41466189-41466208 None:intergenic 20.0%
!!! CATAAAATAGGCTTTTAAAT+AGG - Chr2:41463341-41463360 MsG0280008911.01.T01:intron 20.0%
!!! CATAAATATTGTTTTCTGAA+TGG - Chr2:41463912-41463931 MsG0280008911.01.T01:intron 20.0%
!!! CTAATAAATTTTAGCTTGAA+TGG - Chr2:41465346-41465365 MsG0280008911.01.T01:intron 20.0%
!!! GAAATTTTGAGTAATACTTA+AGG - Chr2:41463572-41463591 MsG0280008911.01.T01:intron 20.0%
!!! GTATTTCTTTTTGAATAGTA+TGG - Chr2:41463602-41463621 MsG0280008911.01.T01:intron 20.0%
!!! GTTGTTTTACTTATAACTTA+TGG - Chr2:41465923-41465942 MsG0280008911.01.T01:intron 20.0%
!!! TCGAATTATAAAGTATTTTC+TGG + Chr2:41465499-41465518 None:intergenic 20.0%
!!! TGAAAACTTCTTTTGAAAAA+TGG - Chr2:41465728-41465747 MsG0280008911.01.T01:intron 20.0%
!!! TTTTTACTTTTGGTTACAAA+TGG - Chr2:41465212-41465231 MsG0280008911.01.T01:intron 20.0%
! AAAACATATTTGTGTGCTTT+AGG - Chr2:41463262-41463281 MsG0280008911.01.T01:intron 25.0%
! AAATAGGCCAAAACTTATTA+AGG + Chr2:41463288-41463307 None:intergenic 25.0%
! AAATTAGTGTTAACTGGATT+AGG + Chr2:41466007-41466026 None:intergenic 25.0%
! AATAACAAAATAATTGGGAC+AGG + Chr2:41464394-41464413 None:intergenic 25.0%
! AATCTTCTTCAATAATGGTA+CGG + Chr2:41465611-41465630 None:intergenic 25.0%
! AATTAGTGTTAACTGGATTA+GGG + Chr2:41466006-41466025 None:intergenic 25.0%
! ACAAAAGAAATATCAGCTAA+AGG + Chr2:41465131-41465150 None:intergenic 25.0%
! ATGTAGAATAAATGGATCAT+CGG + Chr2:41464539-41464558 None:intergenic 25.0%
! ATTAGACTAAAGAATTAGGA+AGG + Chr2:41464842-41464861 None:intergenic 25.0%
! CTTCTTATATTGAAAGTGAT+TGG - Chr2:41465561-41465580 MsG0280008911.01.T01:intron 25.0%
! CTTGGAAATCATAAAAATTC+AGG - Chr2:41462665-41462684 MsG0280008911.01.T01:intron 25.0%
! GAAATCATAAAAATTCAGGT+TGG - Chr2:41462669-41462688 MsG0280008911.01.T01:intron 25.0%
! GATTTCAGTTCTTAAGTAAT+TGG - Chr2:41466097-41466116 MsG0280008911.01.T01:intron 25.0%
! GCTGTACTTATATTATTGAA+AGG + Chr2:41463829-41463848 None:intergenic 25.0%
! GTTATTTATCTGATTCTGAT+AGG - Chr2:41464697-41464716 MsG0280008911.01.T01:CDS 25.0%
! GTTCTATCAAAAACCATATT+TGG + Chr2:41465834-41465853 None:intergenic 25.0%
! TACCATTATTGAAGAAGATT+CGG - Chr2:41465611-41465630 MsG0280008911.01.T01:intron 25.0%
! TGATAGATAGATATTTCAGA+TGG - Chr2:41466412-41466431 MsG0280008911.01.T01:CDS 25.0%
!! AATCCAGTTAACACTAATTT+TGG - Chr2:41466007-41466026 MsG0280008911.01.T01:intron 25.0%
!! CGATCTACTTTGAAAAAAAA+TGG - Chr2:41465668-41465687 MsG0280008911.01.T01:intron 25.0%
!! TAAAAGCCTATTTTATGCTA+AGG + Chr2:41463338-41463357 None:intergenic 25.0%
!! TAATTTGGTATAAGCCATTT+TGG - Chr2:41463509-41463528 MsG0280008911.01.T01:intron 25.0%
!!! GGAGATCAAATTTTGAAATT+TGG - Chr2:41464207-41464226 MsG0280008911.01.T01:intron 25.0%
!!! TAATAAGTTTTGGCCTATTT+AGG - Chr2:41463288-41463307 MsG0280008911.01.T01:intron 25.0%
!!! TGCAGTTATTTGTATTGATT+AGG + Chr2:41464941-41464960 None:intergenic 25.0%
AAAAGGTCAAGAACAAATTC+CGG + Chr2:41466358-41466377 None:intergenic 30.0%
AACTTCTACTAGTTGTATGT+AGG - Chr2:41462921-41462940 MsG0280008911.01.T01:intron 30.0%
ACACTATTTCCAGCATTAAA+AGG - Chr2:41466051-41466070 MsG0280008911.01.T01:intron 30.0%
ACCATTATTGAAGAAGATTC+GGG - Chr2:41465612-41465631 MsG0280008911.01.T01:intron 30.0%
ACTTCTACTAGTTGTATGTA+GGG - Chr2:41462922-41462941 MsG0280008911.01.T01:intron 30.0%
AGTCGGAAACTAAATATGAA+AGG + Chr2:41465313-41465332 None:intergenic 30.0%
ATACAAAGACAAGTCACAAA+AGG + Chr2:41466375-41466394 None:intergenic 30.0%
ATATGAAAAGCTTAATAGGC+CGG + Chr2:41463115-41463134 None:intergenic 30.0%
ATGGCTTATACCAAATTACA+TGG + Chr2:41463507-41463526 None:intergenic 30.0%
ATGTAAACCTACTCCTAAAT+AGG + Chr2:41463304-41463323 None:intergenic 30.0%
ATTGATTAGGATCAGCTTAT+AGG + Chr2:41464928-41464947 None:intergenic 30.0%
CAACAAATTCAATAGCTGTT+TGG - Chr2:41465467-41465486 MsG0280008911.01.T01:intron 30.0%
CGAAAAATATTCACAGAAGA+CGG + Chr2:41465794-41465813 None:intergenic 30.0%
CTTGATCTGCTTCTATTTAA+AGG - Chr2:41465164-41465183 MsG0280008911.01.T01:intron 30.0%
GAAGGTTAGATGAAAAGTTA+GGG - Chr2:41462251-41462270 MsG0280008911.01.T01:three_prime_UTR 30.0%
GGGTAAAATATGCATTTCTT+CGG - Chr2:41465632-41465651 MsG0280008911.01.T01:intron 30.0%
GGTAAAATATGCATTTCTTC+GGG - Chr2:41465633-41465652 MsG0280008911.01.T01:intron 30.0%
TAAATTATTGGAGTTGCTAC+TGG - Chr2:41466225-41466244 MsG0280008911.01.T01:CDS 30.0%
TAATTGACCACCATAATCAA+AGG + Chr2:41466448-41466467 None:intergenic 30.0%
TGACCAAAATTAGTGTTAAC+TGG + Chr2:41466013-41466032 None:intergenic 30.0%
TGGCCTACTTCAAAAATTAT+AGG + Chr2:41463441-41463460 None:intergenic 30.0%
TTAAATAGAAGCAGATCAAG+AGG + Chr2:41465164-41465183 None:intergenic 30.0%
TTAGATGAAAAGTTAGGGTT+TGG - Chr2:41462256-41462275 MsG0280008911.01.T01:three_prime_UTR 30.0%
TTCAATATAAGAAGTCGAGT+AGG + Chr2:41465555-41465574 None:intergenic 30.0%
TTCAGTTCTTAAGTAATTGG+TGG - Chr2:41466100-41466119 MsG0280008911.01.T01:intron 30.0%
TTTATGATTTCCAAGTCTTG+AGG + Chr2:41462660-41462679 None:intergenic 30.0%
! ACGTTCTAAACAAAACTGAA+AGG + Chr2:41464441-41464460 None:intergenic 30.0%
! CTTTAGGCCTTAATAAGTTT+TGG - Chr2:41463278-41463297 MsG0280008911.01.T01:intron 30.0%
! GAAACTTCACAATCAGATTT+TGG + Chr2:41463799-41463818 None:intergenic 30.0%
! TCTTCTGTGAATATTTTTCG+AGG - Chr2:41465794-41465813 MsG0280008911.01.T01:intron 30.0%
! TGGTTTTTGATAGAACACTA+TGG - Chr2:41465838-41465857 MsG0280008911.01.T01:intron 30.0%
! TTTTGATCGTCTTTTGTTAG+AGG - Chr2:41466502-41466521 MsG0280008911.01.T01:five_prime_UTR 30.0%
! TTTTGTTGGATGGATGTAAA+AGG - Chr2:41466529-41466548 MsG0280008911.01.T01:five_prime_UTR 30.0%
!! AGCTATTGAATTTGTTGAAC+GGG + Chr2:41465464-41465483 None:intergenic 30.0%
!! ATCAGATTTTGGCATCTTTT+CGG + Chr2:41463788-41463807 None:intergenic 30.0%
!! CAGCTATTGAATTTGTTGAA+CGG + Chr2:41465465-41465484 None:intergenic 30.0%
!! GAAGTTTTCATTGAGTATTG+AGG + Chr2:41465718-41465737 None:intergenic 30.0%
!! TTACTTTTGGTTACAAATGG+AGG - Chr2:41465215-41465234 MsG0280008911.01.T01:intron 30.0%
!!! AGGCCTATAATTTTTGAAGT+AGG - Chr2:41463435-41463454 MsG0280008911.01.T01:intron 30.0%
AAAAATTATAGGCCTGAGTC+TGG + Chr2:41463430-41463449 None:intergenic 35.0%
AAAGCAGAGTAGAAGAAGAA+TGG - Chr2:41462290-41462309 MsG0280008911.01.T01:three_prime_UTR 35.0%
AACATCTCTGTTGTCAAAAG+CGG - Chr2:41462781-41462800 MsG0280008911.01.T01:intron 35.0%
AACGCAAGCATTCATATGAT+TGG - Chr2:41463179-41463198 MsG0280008911.01.T01:intron 35.0%
AACGCAGGAGTAATAAAAAG+AGG - Chr2:41462225-41462244 MsG0280008911.01.T01:three_prime_UTR 35.0%
AAGAAATTGCACGTGTCAAA+TGG + Chr2:41465400-41465419 None:intergenic 35.0%
AATATAAGAAGTCGAGTAGG+AGG + Chr2:41465552-41465571 None:intergenic 35.0%
ACCCGAATCTTCTTCAATAA+TGG + Chr2:41465616-41465635 None:intergenic 35.0%
ACCTTGTTAATAAACGAGCT+GGG + Chr2:41463011-41463030 None:intergenic 35.0%
ACGCAGGAGTAATAAAAAGA+GGG - Chr2:41462226-41462245 MsG0280008911.01.T01:three_prime_UTR 35.0%
AGAATCTGTTAGGTATCAGT+TGG + Chr2:41465094-41465113 None:intergenic 35.0%
AGCAGAAACAAGATCTCTAA+TGG - Chr2:41462329-41462348 MsG0280008911.01.T01:three_prime_UTR 35.0%
AGGGATAGCAAAATCCAAAA+TGG + Chr2:41463526-41463545 None:intergenic 35.0%
AGTAATAAAAAGAGGGAGGA+AGG - Chr2:41462233-41462252 MsG0280008911.01.T01:three_prime_UTR 35.0%
ATGGTCACTTCATCATCTTA+GGG - Chr2:41465942-41465961 MsG0280008911.01.T01:intron 35.0%
CCTATTTAATTAAACAGGCC+AGG - Chr2:41463053-41463072 MsG0280008911.01.T01:intron 35.0%
CCTGGCCTGTTTAATTAAAT+AGG + Chr2:41463056-41463075 None:intergenic 35.0%
CTCAGAATCAATTAGATTGC+CGG + Chr2:41462433-41462452 None:intergenic 35.0%
CTGCTCCTAATCAATACAAA+TGG - Chr2:41464980-41464999 MsG0280008911.01.T01:intron 35.0%
CTTCTACTAGTTGTATGTAG+GGG - Chr2:41462923-41462942 MsG0280008911.01.T01:intron 35.0%
GATGTAAAAGGAATGGGAAA+CGG - Chr2:41466541-41466560 MsG0280008911.01.T01:five_prime_UTR 35.0%
GCTTATACCAAATTACATGG+TGG + Chr2:41463504-41463523 None:intergenic 35.0%
GGAAGGTTAGATGAAAAGTT+AGG - Chr2:41462250-41462269 MsG0280008911.01.T01:three_prime_UTR 35.0%
TAAATGGATCATCGGAGTAT+TGG + Chr2:41464531-41464550 None:intergenic 35.0%
TAACAGCTGACCTTTGATTA+TGG - Chr2:41466435-41466454 MsG0280008911.01.T01:CDS 35.0%
TACTATTTATAGGTCCGCTT+TGG + Chr2:41462894-41462913 None:intergenic 35.0%
TATGGTCACTTCATCATCTT+AGG - Chr2:41465941-41465960 MsG0280008911.01.T01:intron 35.0%
TCAACTTAACTGTTACACCT+AGG - Chr2:41464334-41464353 MsG0280008911.01.T01:intron 35.0%
TGCTAAAAACTGCAGTAATG+CGG - Chr2:41465260-41465279 MsG0280008911.01.T01:intron 35.0%
TGGATGGATGTAAAAGGAAT+GGG - Chr2:41466535-41466554 MsG0280008911.01.T01:five_prime_UTR 35.0%
TTCTACTAGTTGTATGTAGG+GGG - Chr2:41462924-41462943 MsG0280008911.01.T01:intron 35.0%
TTGGATGGATGTAAAAGGAA+TGG - Chr2:41466534-41466553 MsG0280008911.01.T01:five_prime_UTR 35.0%
TTGGGTTTAATAACTGCATC+AGG - Chr2:41465045-41465064 MsG0280008911.01.T01:intron 35.0%
TTTCTACATGTATGATCGGT+TGG + Chr2:41466185-41466204 None:intergenic 35.0%
TTTCTCCGATGATCCATTTA+GGG - Chr2:41464616-41464635 MsG0280008911.01.T01:CDS 35.0%
! AAATGGATCATCGGAGTATT+GGG + Chr2:41464530-41464549 None:intergenic 35.0%
! ACCAAATTACATGGTGGAAA+TGG + Chr2:41463498-41463517 None:intergenic 35.0%
! AGGCTTTTAAATAGGCTTTC+AGG - Chr2:41463349-41463368 MsG0280008911.01.T01:intron 35.0%
! ATTTTGCATTCCTCAAGACT+TGG - Chr2:41462647-41462666 MsG0280008911.01.T01:intron 35.0%
! CAAGATCTCTAATGGATAAG+CGG - Chr2:41462337-41462356 MsG0280008911.01.T01:three_prime_UTR 35.0%
! CAATGAGTTGGATCCAAATA+TGG - Chr2:41465818-41465837 MsG0280008911.01.T01:intron 35.0%
! CCAAATTACATGGTGGAAAT+GGG + Chr2:41463497-41463516 None:intergenic 35.0%
! TGAAAATTTGCTCCATAGGT+TGG - Chr2:41464245-41464264 MsG0280008911.01.T01:intron 35.0%
! TTAGCTTGAATGGTTTGTAG+AGG - Chr2:41465356-41465375 MsG0280008911.01.T01:intron 35.0%
! TTTTCGCCTGGCATTTTTAA+AGG + Chr2:41463385-41463404 None:intergenic 35.0%
! TTTTCTCCGATGATCCATTT+AGG - Chr2:41464615-41464634 MsG0280008911.01.T01:CDS 35.0%
! TTTTGGCATCTTTTCGGATT+AGG + Chr2:41463782-41463801 None:intergenic 35.0%
!! AGGTATCAGTTGGTATTGAT+AGG + Chr2:41465084-41465103 None:intergenic 35.0%
!! ATGGATGGATTGAAAGAAGA+AGG + Chr2:41462490-41462509 None:intergenic 35.0%
!! CAAATGGATTAGAGAAGGTA+GGG + Chr2:41465384-41465403 None:intergenic 35.0%
!! GGTATCAGTTGGTATTGATA+GGG + Chr2:41465083-41465102 None:intergenic 35.0%
!! TCAAATGGATTAGAGAAGGT+AGG + Chr2:41465385-41465404 None:intergenic 35.0%
!! TGCAGCCATTTGTATTGATT+AGG + Chr2:41464988-41465007 None:intergenic 35.0%
!! TGGATGGATTGAAAGAAGAA+GGG + Chr2:41462489-41462508 None:intergenic 35.0%
!! TGTATTGATTAGGAGCAGTT+AGG + Chr2:41464978-41464997 None:intergenic 35.0%
!! TTCTTAAGTAATTGGTGGTG+TGG - Chr2:41466105-41466124 MsG0280008911.01.T01:intron 35.0%
!!! ATTTTTCGAGGTCAATGAGT+TGG - Chr2:41465806-41465825 MsG0280008911.01.T01:intron 35.0%
!!! TTGTTAGAGGTGTCTTTTGT+TGG - Chr2:41466515-41466534 MsG0280008911.01.T01:five_prime_UTR 35.0%
AAAAGCCTATTAAGCCCATC+AGG - Chr2:41463089-41463108 MsG0280008911.01.T01:intron 40.0%
AACAAGTGGAACGTCGATAT+CGG + Chr2:41462549-41462568 None:intergenic 40.0%
AACAGTTTCTGCAGTAGATG+AGG + Chr2:41464049-41464068 None:intergenic 40.0%
ACCCAGCTCGTTTATTAACA+AGG - Chr2:41463007-41463026 MsG0280008911.01.T01:intron 40.0%
AGAGAGAGAGAGAGTTATGA+TGG + Chr2:41462509-41462528 None:intergenic 40.0%
AGCCATCATCATTGTCTTAG+CGG + Chr2:41464014-41464033 None:intergenic 40.0%
ATAACTCTCTCTCTCTCTCT+AGG - Chr2:41462511-41462530 MsG0280008911.01.T01:intron 40.0%
ATCCTTCTGAACACCCTAAA+TGG + Chr2:41464632-41464651 None:intergenic 40.0%
ATTCACAGAAGACGGAATTC+AGG + Chr2:41465786-41465805 None:intergenic 40.0%
CAATACCTGTTGTCATCATG+AGG - Chr2:41464298-41464317 MsG0280008911.01.T01:intron 40.0%
CACAACTGTAGACATGATTC+AGG + Chr2:41464868-41464887 None:intergenic 40.0%
CAGAGTAGAAGAAGAATGGT+GGG - Chr2:41462294-41462313 MsG0280008911.01.T01:three_prime_UTR 40.0%
CAGGAGTAATAAAAAGAGGG+AGG - Chr2:41462229-41462248 MsG0280008911.01.T01:three_prime_UTR 40.0%
CCCATTTCCACCATGTAATT+TGG - Chr2:41463494-41463513 MsG0280008911.01.T01:intron 40.0%
CTGAATCATGTCTACAGTTG+TGG - Chr2:41464866-41464885 MsG0280008911.01.T01:intron 40.0%
GAACACCCTAAATGGATCAT+CGG + Chr2:41464624-41464643 None:intergenic 40.0%
GACCTTGTTAATAAACGAGC+TGG + Chr2:41463012-41463031 None:intergenic 40.0%
GAGGTCTAGTAGTATAGAGT+GGG - Chr2:41465234-41465253 MsG0280008911.01.T01:intron 40.0%
GCATCTACAAGATCCGAAAA+TGG + Chr2:41466297-41466316 None:intergenic 40.0%
GTAAACATACGTGTCAGTGT+CGG - Chr2:41463744-41463763 MsG0280008911.01.T01:intron 40.0%
GTAGGTTTACATATGTTGCC+AGG - Chr2:41463312-41463331 MsG0280008911.01.T01:intron 40.0%
GTTTACCTCTGTTGTCAATG+CGG + Chr2:41463730-41463749 None:intergenic 40.0%
TAAAAGGAATGGGAAACGGA+AGG - Chr2:41466545-41466564 MsG0280008911.01.T01:five_prime_UTR 40.0%
TAAACATACGTGTCAGTGTC+GGG - Chr2:41463745-41463764 MsG0280008911.01.T01:intron 40.0%
TAACTCTCTCTCTCTCTCTA+GGG - Chr2:41462512-41462531 MsG0280008911.01.T01:intron 40.0%
TAACTGTTACACCTAGGACT+TGG - Chr2:41464340-41464359 MsG0280008911.01.T01:intron 40.0%
TAATTAAACAGGCCAGGCTA+AGG - Chr2:41463059-41463078 MsG0280008911.01.T01:intron 40.0%
TATTTATAGGTCCGCTTTGG+CGG + Chr2:41462891-41462910 None:intergenic 40.0%
TTCCGCTAAGACAATGATGA+TGG - Chr2:41464009-41464028 MsG0280008911.01.T01:intron 40.0%
! AGAGAGAGAGTTATGATGGA+TGG + Chr2:41462505-41462524 None:intergenic 40.0%
! ATCAGGCCTTTAAAAATGCC+AGG - Chr2:41463376-41463395 MsG0280008911.01.T01:intron 40.0%
! ATCCATTTAGGGTGTTCAGA+AGG - Chr2:41464627-41464646 MsG0280008911.01.T01:CDS 40.0%
! CAGGTGAAAATTTGCTCCAT+AGG - Chr2:41464241-41464260 MsG0280008911.01.T01:intron 40.0%
! CGGCAATCTAATTGATTCTG+AGG - Chr2:41462431-41462450 MsG0280008911.01.T01:CDS 40.0%
! CTTGGGTTAGACTGGTAAAA+GGG + Chr2:41464507-41464526 None:intergenic 40.0%
! GTGATCGTTTGTTTCTTCTC+CGG - Chr2:41466336-41466355 MsG0280008911.01.T01:intron 40.0%
! TCTGAAGTAGCATTAGCTCT+GGG + Chr2:41464799-41464818 None:intergenic 40.0%
! TGCTATCAGGCACTTCTTTT+GGG - Chr2:41465027-41465046 MsG0280008911.01.T01:intron 40.0%
! TTGGGTTAGACTGGTAAAAG+GGG + Chr2:41464506-41464525 None:intergenic 40.0%
!! AGCTAGGCTTTAAATAGGCT+GGG + Chr2:41462985-41463004 None:intergenic 40.0%
!! AGGATTGGTCCGATTAGAAA+AGG + Chr2:41465532-41465551 None:intergenic 40.0%
!! CGTGTCAAATGGATTAGAGA+AGG + Chr2:41465389-41465408 None:intergenic 40.0%
!! GTTTTGGCCTATTTAGGAGT+AGG - Chr2:41463294-41463313 MsG0280008911.01.T01:intron 40.0%
!!! TAGAGGTGTCTTTTGTTGGA+TGG - Chr2:41466519-41466538 MsG0280008911.01.T01:five_prime_UTR 40.0%
!!! TTCTGTGCAGATGCCATTTT+CGG - Chr2:41466281-41466300 MsG0280008911.01.T01:intron 40.0%
!!! TTTTGAAGTAGGCCAGACTT+AGG - Chr2:41463446-41463465 MsG0280008911.01.T01:intron 40.0%
AAAATCAAGACCACCGCATC+AGG - Chr2:41462836-41462855 MsG0280008911.01.T01:intron 45.0%
AAATTTGGCAACGTCGAAGC+AGG - Chr2:41464222-41464241 MsG0280008911.01.T01:intron 45.0%
AAGAAGTCGAGTAGGAGGAT+TGG + Chr2:41465547-41465566 None:intergenic 45.0%
ACATCCACATCCATCGAGTT+GGG + Chr2:41464111-41464130 None:intergenic 45.0%
ACTAGTTGTATGTAGGGGGT+GGG - Chr2:41462928-41462947 MsG0280008911.01.T01:intron 45.0%
AGGCGAAAATGAGCCTATGA+CGG - Chr2:41463396-41463415 MsG0280008911.01.T01:intron 45.0%
ATAGGCTTTCAGGCTTCATC+AGG - Chr2:41463359-41463378 MsG0280008911.01.T01:intron 45.0%
ATCTCGTCAACCACTGCAAA+GGG + Chr2:41464147-41464166 None:intergenic 45.0%
ATGGTACGGAATAGTCTCGT+TGG + Chr2:41465597-41465616 None:intergenic 45.0%
ATTAGATTGCCGGAAAGTCC+AGG + Chr2:41462423-41462442 None:intergenic 45.0%
CAGCTGACCTTTGATTATGG+TGG - Chr2:41466438-41466457 MsG0280008911.01.T01:CDS 45.0%
CGGAATAGTCTCGTTGGAAT+AGG + Chr2:41465591-41465610 None:intergenic 45.0%
CGTCATTTGATCCATGTAGC+CGG - Chr2:41465861-41465880 MsG0280008911.01.T01:intron 45.0%
CTCACAAGGACATTCTGTGA+TGG + Chr2:41464081-41464100 None:intergenic 45.0%
CTGTTGTCAATGCGGAAATG+CGG + Chr2:41463722-41463741 None:intergenic 45.0%
CTTCGTGTCTCGTGTTTCAT+AGG + Chr2:41462708-41462727 None:intergenic 45.0%
GCAGAGTAGAAGAAGAATGG+TGG - Chr2:41462293-41462312 MsG0280008911.01.T01:three_prime_UTR 45.0%
GCCAGGCCTTAGCATAAAAT+AGG - Chr2:41463329-41463348 MsG0280008911.01.T01:intron 45.0%
GGAGGTCTAGTAGTATAGAG+TGG - Chr2:41465233-41465252 MsG0280008911.01.T01:intron 45.0%
GGTCTAGACAGAGTGATTTC+AGG + Chr2:41465985-41466004 None:intergenic 45.0%
GTAGAGGATGGTTTACAGCT+TGG - Chr2:41464186-41464205 MsG0280008911.01.T01:intron 45.0%
TACTAGTTGTATGTAGGGGG+TGG - Chr2:41462927-41462946 MsG0280008911.01.T01:intron 45.0%
TATCTCGTCAACCACTGCAA+AGG + Chr2:41464148-41464167 None:intergenic 45.0%
TGCTGAGTGTGTCGTAATGT+TGG - Chr2:41466314-41466333 MsG0280008911.01.T01:intron 45.0%
TGTCTACAGTTGTGGCTGAA+TGG - Chr2:41464874-41464893 MsG0280008911.01.T01:intron 45.0%
TTAACAGCCCAACTGCTATC+AGG - Chr2:41465014-41465033 MsG0280008911.01.T01:intron 45.0%
TTAGATTGCCGGAAAGTCCA+GGG + Chr2:41462422-41462441 None:intergenic 45.0%
! AAGCCTTATCCCACTAAGTG+GGG + Chr2:41465887-41465906 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG + Chr2:41465888-41465907 None:intergenic 45.0%
! CATTTCCGCATTGACAACAG+AGG - Chr2:41463722-41463741 MsG0280008911.01.T01:intron 45.0%
! CTGCTATCAGGCACTTCTTT+TGG - Chr2:41465026-41465045 MsG0280008911.01.T01:intron 45.0%
! GCCTATTTTATGCTAAGGCC+TGG + Chr2:41463333-41463352 None:intergenic 45.0%
! GCTTGGGTTAGACTGGTAAA+AGG + Chr2:41464508-41464527 None:intergenic 45.0%
! TTACATGGTGGAAATGGGCT+AGG + Chr2:41463492-41463511 None:intergenic 45.0%
!! AAGAAGTGCCTGATAGCAGT+TGG + Chr2:41465025-41465044 None:intergenic 45.0%
!! AGAAGTGCCTGATAGCAGTT+GGG + Chr2:41465024-41465043 None:intergenic 45.0%
!! AGCATTAGCTCTGGGATTAC+AGG + Chr2:41464791-41464810 None:intergenic 45.0%
!! ATCATCGGAGTATTGGGCTT+GGG + Chr2:41464524-41464543 None:intergenic 45.0%
!! ATGAGCCTATGACGGGTAAT+AGG - Chr2:41463404-41463423 MsG0280008911.01.T01:intron 45.0%
!! CATTAGCTCTGGGATTACAG+GGG + Chr2:41464789-41464808 None:intergenic 45.0%
!! CTCTGAAGTAGCATTAGCTC+TGG + Chr2:41464800-41464819 None:intergenic 45.0%
!! GAGCTAGGCTTTAAATAGGC+TGG + Chr2:41462986-41463005 None:intergenic 45.0%
!! GCATTAGCTCTGGGATTACA+GGG + Chr2:41464790-41464809 None:intergenic 45.0%
!! GGTCGAGCTAGGCTTTAAAT+AGG + Chr2:41462990-41463009 None:intergenic 45.0%
!!! CTTTTTTGCAAGCCTTAGCC+TGG + Chr2:41463074-41463093 None:intergenic 45.0%
AGTTGGGGGAAAGACTCACA+AGG + Chr2:41464095-41464114 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG - Chr2:41465886-41465905 MsG0280008911.01.T01:intron 50.0%
CCTGTTGTCATCATGAGGCA+AGG - Chr2:41464303-41464322 MsG0280008911.01.T01:intron 50.0%
CCTTGCCTCATGATGACAAC+AGG + Chr2:41464306-41464325 None:intergenic 50.0%
CTCGATGGATGTGGATGTCT+TGG - Chr2:41464113-41464132 MsG0280008911.01.T01:intron 50.0%
CTTTAAATAGGCTGGGCCGT+AGG + Chr2:41462978-41462997 None:intergenic 50.0%
GACATCCACATCCATCGAGT+TGG + Chr2:41464112-41464131 None:intergenic 50.0%
GACTTAGGCCTTACAAAGCC+CGG - Chr2:41463461-41463480 MsG0280008911.01.T01:intron 50.0%
GATAGCAGATGCATCACCAG+CGG - Chr2:41464164-41464183 MsG0280008911.01.T01:intron 50.0%
GCTCGTCTTTCTCAATTCCC+TGG - Chr2:41462393-41462412 MsG0280008911.01.T01:three_prime_UTR 50.0%
GGCGAAAATGAGCCTATGAC+GGG - Chr2:41463397-41463416 MsG0280008911.01.T01:intron 50.0%
GGTTAGTAGACCCTTTGCAG+TGG - Chr2:41464134-41464153 MsG0280008911.01.T01:intron 50.0%
GTTACACCTAGGACTTGGCA+AGG - Chr2:41464345-41464364 MsG0280008911.01.T01:intron 50.0%
GTTGAACGGGCAAAGACAGA+AGG + Chr2:41465451-41465470 None:intergenic 50.0%
TAGATTGCCGGAAAGTCCAG+GGG + Chr2:41462421-41462440 None:intergenic 50.0%
TCTGGCCTATTACCCGTCAT+AGG + Chr2:41463412-41463431 None:intergenic 50.0%
TGGCAAGGCAGAGGTTTACT+GGG - Chr2:41464360-41464379 MsG0280008911.01.T01:intron 50.0%
TGTAAACCATCCTCTACCGC+TGG + Chr2:41464183-41464202 None:intergenic 50.0%
TGTTTGACCCATGCTCGACT+GGG + Chr2:41464280-41464299 None:intergenic 50.0%
TTGGCAAGGCAGAGGTTTAC+TGG - Chr2:41464359-41464378 MsG0280008911.01.T01:intron 50.0%
TTGTTTGACCCATGCTCGAC+TGG + Chr2:41464281-41464300 None:intergenic 50.0%
! CATCCACATCCATCGAGTTG+GGG + Chr2:41464110-41464129 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG + Chr2:41465889-41465908 None:intergenic 50.0%
! GGCTTTGTAAGGCCTAAGTC+TGG + Chr2:41463461-41463480 None:intergenic 50.0%
! GTATTGGGCTTGGGTTAGAC+TGG + Chr2:41464515-41464534 None:intergenic 50.0%
! GTCATAGGCTCATTTTCGCC+TGG + Chr2:41463397-41463416 None:intergenic 50.0%
!! ATCCACATCCATCGAGTTGG+GGG + Chr2:41464109-41464128 None:intergenic 50.0%
!! GATCATCGGAGTATTGGGCT+TGG + Chr2:41464525-41464544 None:intergenic 50.0%
ACGGGTAATAGGCCAGACTC+AGG - Chr2:41463415-41463434 MsG0280008911.01.T01:intron 55.0%
AGATGCATCACCAGCGGTAG+AGG - Chr2:41464170-41464189 MsG0280008911.01.T01:intron 55.0%
AGCTTAATAGGCCGGCCTGA+TGG + Chr2:41463107-41463126 None:intergenic 55.0%
CACCGCGCCAATTATTGGGT+TGG - Chr2:41463691-41463710 MsG0280008911.01.T01:intron 55.0%
CCTGCACCGCGCCAATTATT+GGG - Chr2:41463687-41463706 MsG0280008911.01.T01:intron 55.0%
CGTCGTTCAGCTCGAACAAG+TGG + Chr2:41462563-41462582 None:intergenic 55.0%
CTTATCCCACTAAGTGGGGC+CGG + Chr2:41465883-41465902 None:intergenic 55.0%
GAAGTGGAAAGCCGCCAAAG+CGG - Chr2:41462877-41462896 MsG0280008911.01.T01:intron 55.0%
GAGTCTTTCCCCCAACTCGA+TGG - Chr2:41464098-41464117 MsG0280008911.01.T01:intron 55.0%
GCCTATTAAGCCCATCAGGC+CGG - Chr2:41463093-41463112 MsG0280008911.01.T01:intron 55.0%
GCTTAATAGGCCGGCCTGAT+GGG + Chr2:41463106-41463125 None:intergenic 55.0%
GGAACGTCGATATCGGAACG+AGG + Chr2:41462542-41462561 None:intergenic 55.0%
GGCAAGGCAGAGGTTTACTG+GGG - Chr2:41464361-41464380 MsG0280008911.01.T01:intron 55.0%
GGCCAACCCAATAATTGGCG+CGG + Chr2:41463696-41463715 None:intergenic 55.0%
GTTGTCAAAAGCGGTTGCGC+CGG - Chr2:41462790-41462809 MsG0280008911.01.T01:intron 55.0%
TAAACGAGCTGGGTCGAGCT+AGG + Chr2:41463001-41463020 None:intergenic 55.0%
TCCTGCACCGCGCCAATTAT+TGG - Chr2:41463686-41463705 MsG0280008911.01.T01:intron 55.0%
TGTATGTAGGGGGTGGGAAC+AGG - Chr2:41462934-41462953 MsG0280008911.01.T01:intron 55.0%
TTCCCCCAACTCGATGGATG+TGG - Chr2:41464104-41464123 MsG0280008911.01.T01:intron 55.0%
! ATACGTGTCAGTGTCGGGCA+CGG - Chr2:41463750-41463769 MsG0280008911.01.T01:intron 55.0%
!! ATGGTGGAAATGGGCTAGGC+CGG + Chr2:41463488-41463507 None:intergenic 55.0%
AATTGGCGCGGTGCAGGAGT+GGG + Chr2:41463684-41463703 None:intergenic 60.0%
ACTAAGTGGGGCCGGCTACA+TGG + Chr2:41465875-41465894 None:intergenic 60.0%
ATGTAGCCGGCCCCACTTAG+TGG - Chr2:41465874-41465893 MsG0280008911.01.T01:intron 60.0%
CCCAATAATTGGCGCGGTGC+AGG + Chr2:41463690-41463709 None:intergenic 60.0%
CCTAGGACTTGGCAAGGCAG+AGG - Chr2:41464351-41464370 MsG0280008911.01.T01:intron 60.0%
CCTCTGCCTTGCCAAGTCCT+AGG + Chr2:41464354-41464373 None:intergenic 60.0%
CGGCCCCACTTAGTGGGATA+AGG - Chr2:41465881-41465900 MsG0280008911.01.T01:intron 60.0%
GCATCACCAGCGGTAGAGGA+TGG - Chr2:41464174-41464193 MsG0280008911.01.T01:intron 60.0%
GGCGCGGCCAACCCAATAAT+TGG + Chr2:41463701-41463720 None:intergenic 60.0%
GTCAATGCGGAAATGCGGCG+CGG + Chr2:41463717-41463736 None:intergenic 60.0%
TAATTGGCGCGGTGCAGGAG+TGG + Chr2:41463685-41463704 None:intergenic 60.0%
TGTAGCCGGCCCCACTTAGT+GGG - Chr2:41465875-41465894 MsG0280008911.01.T01:intron 60.0%
! TACGTGTCAGTGTCGGGCAC+GGG - Chr2:41463751-41463770 MsG0280008911.01.T01:intron 60.0%
!! GCCGGCCTGATGGGCTTAAT+AGG + Chr2:41463097-41463116 None:intergenic 60.0%
!! GCTCCATAGGTTGGCTTCCG+AGG - Chr2:41464254-41464273 MsG0280008911.01.T01:intron 60.0%
!! TGGTGGAAATGGGCTAGGCC+GGG + Chr2:41463487-41463506 None:intergenic 60.0%
ACCACCGCATCAGGCTGCGT+CGG - Chr2:41462845-41462864 MsG0280008911.01.T01:intron 65.0%
ACCCATGCTCGACTGGGCCT+CGG + Chr2:41464274-41464293 None:intergenic 65.0%
AGGCCTTACAAAGCCCGGCC+CGG - Chr2:41463466-41463485 MsG0280008911.01.T01:intron 65.0%
ATTGGCGCGGTGCAGGAGTG+GGG + Chr2:41463683-41463702 None:intergenic 65.0%
GGGCCTCGGAAGCCAACCTA+TGG + Chr2:41464260-41464279 None:intergenic 65.0%
TCCGAGGCCCAGTCGAGCAT+GGG - Chr2:41464270-41464289 MsG0280008911.01.T01:intron 65.0%
TCCGCTCCGCTCCGCTATAG+CGG + Chr2:41462816-41462835 None:intergenic 65.0%
TCTCAATTCCCTGGCGCCCC+TGG - Chr2:41462402-41462421 MsG0280008911.01.T01:exon 65.0%
TTCCGAGGCCCAGTCGAGCA+TGG - Chr2:41464269-41464288 MsG0280008911.01.T01:intron 65.0%
!! GCGCGTAGCGGGCGCTATTT+CGG + Chr2:41463661-41463680 None:intergenic 65.0%
AACAGGCCAGGCCGTCCGAC+AGG - Chr2:41462951-41462970 MsG0280008911.01.T01:intron 70.0%
ACAGGCCAGGCCGTCCGACA+GGG - Chr2:41462952-41462971 MsG0280008911.01.T01:intron 70.0%
AGGCCGTCCGACAGGGCCTA+CGG - Chr2:41462959-41462978 MsG0280008911.01.T01:intron 70.0%
CCTGGCGCCCCTGGACTTTC+CGG - Chr2:41462411-41462430 MsG0280008911.01.T01:exon 70.0%
CTCCGCTCCGCTATAGCGGC+CGG + Chr2:41462812-41462831 None:intergenic 70.0%
GTAGGGGGTGGGAACAGGCC+AGG - Chr2:41462939-41462958 MsG0280008911.01.T01:intron 70.0%
TGCAGGAGTGGGGCGCGTAG+CGG + Chr2:41463673-41463692 None:intergenic 70.0%
! AGGCCGGGCCGGGCTTTGTA+AGG + Chr2:41463472-41463491 None:intergenic 70.0%
! GCCGCTATAGCGGAGCGGAG+CGG - Chr2:41462812-41462831 MsG0280008911.01.T01:intron 70.0%
! GCGTCGGCGCACGTCAGAAG+TGG - Chr2:41462861-41462880 MsG0280008911.01.T01:intron 70.0%
! GGTTGCGCCGGCCGCTATAG+CGG - Chr2:41462802-41462821 MsG0280008911.01.T01:intron 70.0%
! TGCGCCGACGCAGCCTGATG+CGG + Chr2:41462852-41462871 None:intergenic 70.0%
!! CGGAAAGTCCAGGGGCGCCA+GGG + Chr2:41462413-41462432 None:intergenic 70.0%
!! GAAATGGGCTAGGCCGGGCC+GGG + Chr2:41463482-41463501 None:intergenic 70.0%
!! GGAAATGGGCTAGGCCGGGC+CGG + Chr2:41463483-41463502 None:intergenic 70.0%
GCAGGAGTGGGGCGCGTAGC+GGG + Chr2:41463672-41463691 None:intergenic 75.0%
GCCGACGCAGCCTGATGCGG+TGG + Chr2:41462849-41462868 None:intergenic 75.0%
GGCTGGGCCGTAGGCCCTGT+CGG + Chr2:41462969-41462988 None:intergenic 75.0%
GGGCCGTAGGCCCTGTCGGA+CGG + Chr2:41462965-41462984 None:intergenic 75.0%
GTAGGCCCTGTCGGACGGCC+TGG + Chr2:41462960-41462979 None:intergenic 75.0%
! CGCCGGCCGCTATAGCGGAG+CGG - Chr2:41462807-41462826 MsG0280008911.01.T01:intron 75.0%
!! CCGGAAAGTCCAGGGGCGCC+AGG + Chr2:41462414-41462433 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr2 gene 41462220 41466572 41462220 ID=MsG0280008911.01;Name=MsG0280008911.01
Chr2 mRNA 41462220 41466572 41462220 ID=MsG0280008911.01.T01;Parent=MsG0280008911.01;Name=MsG0280008911.01.T01;_AED=0.38;_eAED=0.40;_QI=89|0.66|0.75|1|0.66|0.5|4|201|260
Chr2 exon 41466340 41466572 41466340 ID=MsG0280008911.01.T01:exon:29842;Parent=MsG0280008911.01.T01
Chr2 exon 41466106 41466259 41466106 ID=MsG0280008911.01.T01:exon:29843;Parent=MsG0280008911.01.T01
Chr2 exon 41464370 41464773 41464370 ID=MsG0280008911.01.T01:exon:29844;Parent=MsG0280008911.01.T01
Chr2 exon 41462220 41462501 41462220 ID=MsG0280008911.01.T01:exon:29845;Parent=MsG0280008911.01.T01
Chr2 five_prime_UTR 41466484 41466572 41466484 ID=MsG0280008911.01.T01:five_prime_utr;Parent=MsG0280008911.01.T01
Chr2 CDS 41466340 41466483 41466340 ID=MsG0280008911.01.T01:cds;Parent=MsG0280008911.01.T01
Chr2 CDS 41466106 41466259 41466106 ID=MsG0280008911.01.T01:cds;Parent=MsG0280008911.01.T01
Chr2 CDS 41464370 41464773 41464370 ID=MsG0280008911.01.T01:cds;Parent=MsG0280008911.01.T01
Chr2 CDS 41462421 41462501 41462421 ID=MsG0280008911.01.T01:cds;Parent=MsG0280008911.01.T01
Chr2 three_prime_UTR 41462220 41462420 41462220 ID=MsG0280008911.01.T01:three_prime_utr;Parent=MsG0280008911.01.T01
Gene Sequence

>MsG0280008911.01.T01

ATGGTGGGAACGAACGTGAAAGCAGAAACAAGATCTCTAATGGATAAGCGGAGTGCGTTAGAGTCTGAAATGAACTCAATCATCGCTCGTCTTTCTCAATTCCCTGGCGCCCCTGGACTTTCCGGCAATCTAATTGATTCTGAGGGTTTTCCTCGTTCCGATATCGACGTTCCACTTGTTCGAGCTGAACGACGTCGTCTTACTGAGCTGCGTAATGACTACACCGACATAACTGATAAGATTAATCAAAATATACACATTTTGCATTCCTCAAGACTTGGAAATCATAAAAATTCAGACAATGATGATGGCTCAGACATGCAGACCTCATCTACTGCAGAAACTGTTGCATCAACACCATCACAGAATGTCCTTGTGAGTCTTTCCCCCAACTCGATGGATGTGGATGTCTTGGTTAGTAGACCCTTTGCAGTGGTTGACGAGATAGCAGATGCATCACCAGCGGTAGAGGATGGTTTACAGCTTGGAGATCAAATTTTGAAATTTGGCAACGTCGAAGCAGGTGAAAATTTGCTCCATAGGTTGGCTTCCGAGGCCCAGTCGAGCATGGGTCAAACAATACCTGTTGTCATCATGAGGCAAGGCACAGTGATCAACTTAACTGTTACACCTAGGACTTGGCAAGGCAGAGGTTTACTGGGGTATGCTTCCTGTCCCAATTATTTTGTTATTTGTTATCTTATGCCATTTTCGGATCTTGTAGATGCTGAGTGTGTCGTAATGTTGGTGATCGTTTGTTTCTTCTCCGGAATTTGTTCTTGA
Protein sequence

>MsG0280008911.01.T01

MVGTNVKAETRSLMDKRSALESEMNSIIARLSQFPGAPGLSGNLIDSEGFPRSDIDVPLVRAERRRLTELRNDYTDITDKINQNIHILHSSRLGNHKNSDNDDGSDMQTSSTAETVASTPSQNVLVSLSPNSMDVDVLVSRPFAVVDEIADASPAVEDGLQLGDQILKFGNVEAGENLLHRLASEAQSSMGQTIPVVIMRQGTVINLTVTPRTWQGRGLLGYASCPNYFVICYLMPFSDLVDAECVVMLVIVCFFSGICS*