AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480019542.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480019542.01.T01 MTR_1g083330 98.324 179 3 0 1 179 1 179 6.91e-120 352
MsG0480019542.01.T01 MTR_1g083330 100.000 158 0 0 178 335 242 399 1.57e-109 326
MsG0480019542.01.T01 MTR_4g033235 97.753 178 4 0 2 179 3 180 2.39e-119 351
MsG0480019542.01.T01 MTR_4g033235 100.000 158 0 0 178 335 243 400 1.97e-109 326
MsG0480019542.01.T01 MTR_8g023550 41.637 281 109 3 120 345 115 395 3.01e-64 209
MsG0480019542.01.T01 MTR_1g069105 38.663 344 152 8 37 329 79 414 9.32e-60 199
MsG0480019542.01.T01 MTR_7g099640 38.372 344 153 8 37 329 78 413 4.36e-59 196
MsG0480019542.01.T01 MTR_7g099640 38.372 344 153 8 37 329 78 413 6.34e-59 196
MsG0480019542.01.T01 MTR_4g094270 56.250 160 69 1 178 336 231 390 6.68e-57 191
MsG0480019542.01.T01 MTR_3g112260 54.000 150 69 0 180 329 213 362 5.83e-54 182
MsG0480019542.01.T01 MTR_3g117230 52.667 150 71 0 180 329 216 365 1.54e-53 181
MsG0480019542.01.T01 MTR_3g062510 51.250 160 78 0 172 331 228 387 4.49e-52 178
MsG0480019542.01.T01 MTR_1g095660 49.180 183 84 2 172 345 187 369 8.66e-50 171
MsG0480019542.01.T01 MTR_1g069105 36.076 316 142 9 37 301 79 385 1.39e-42 152
MsG0480019542.01.T01 MTR_3g115110 44.828 174 93 1 178 348 323 496 3.01e-41 153
MsG0480019542.01.T01 MTR_3g062510 42.162 185 101 2 103 287 165 343 1.80e-40 146
MsG0480019542.01.T01 MTR_4g094662 44.025 159 89 0 178 336 303 461 2.28e-36 139
MsG0480019542.01.T01 MTR_2g438140 46.405 153 82 0 178 330 300 452 5.41e-36 138
MsG0480019542.01.T01 MTR_2g438140 46.405 153 82 0 178 330 360 512 1.32e-35 137
MsG0480019542.01.T01 MTR_7g010800 43.125 160 91 0 178 337 280 439 3.78e-35 135
MsG0480019542.01.T01 MTR_2g101290 44.025 159 89 0 178 336 489 647 2.22e-33 131
MsG0480019542.01.T01 MTR_2g101290 44.025 159 89 0 178 336 489 647 2.57e-33 131
MsG0480019542.01.T01 MTR_7g088980 41.558 154 90 0 178 331 211 364 1.62e-32 125
MsG0480019542.01.T01 MTR_7g088980 40.000 90 53 1 241 330 8 96 1.66e-11 65.5
MsG0480019542.01.T01 MTR_7g088980 41.558 154 90 0 178 331 293 446 7.15e-32 125
MsG0480019542.01.T01 MTR_7g088980 34.641 153 94 3 182 330 28 178 1.25e-16 81.3
MsG0480019542.01.T01 MTR_7g088980 41.558 154 90 0 178 331 361 514 8.13e-32 125
MsG0480019542.01.T01 MTR_7g088980 34.416 154 95 3 182 331 96 247 1.47e-16 81.3
MsG0480019542.01.T01 MTR_4g064350 43.210 162 89 2 178 336 394 555 1.22e-31 126
MsG0480019542.01.T01 MTR_7g088980 41.558 154 90 0 178 331 387 540 1.32e-31 125
MsG0480019542.01.T01 MTR_7g088980 34.416 154 95 3 182 331 122 273 1.82e-16 80.9
MsG0480019542.01.T01 MTR_1g028390 46.043 139 71 1 178 316 403 537 1.61e-31 125
MsG0480019542.01.T01 MTR_1g044600 39.773 176 103 3 164 336 188 363 3.32e-31 123
MsG0480019542.01.T01 MTR_6g016600 42.857 161 87 2 178 336 391 548 6.88e-31 123
MsG0480019542.01.T01 MTR_3g104470 44.242 165 88 2 178 342 298 458 9.01e-31 123
MsG0480019542.01.T01 MTR_0376s0020 41.139 158 91 1 180 335 77 234 2.76e-30 121
MsG0480019542.01.T01 MTR_3g104480 43.636 165 89 2 178 342 296 456 1.38e-29 120
MsG0480019542.01.T01 MTR_5g069780 41.615 161 91 2 178 335 387 547 2.11e-29 119
MsG0480019542.01.T01 MTR_7g078570 41.975 162 91 3 178 336 266 427 2.18e-29 119
MsG0480019542.01.T01 MTR_1g063380 37.908 153 95 0 179 331 554 706 2.77e-29 119
MsG0480019542.01.T01 MTR_1g063380 40.541 148 85 2 182 329 284 428 6.94e-27 112
MsG0480019542.01.T01 MTR_3g096000 41.875 160 87 3 178 331 370 529 5.83e-29 118
MsG0480019542.01.T01 MTR_7g101870 37.908 153 95 0 179 331 555 707 6.35e-29 118
MsG0480019542.01.T01 MTR_7g101870 39.865 148 86 2 182 329 285 429 2.16e-26 110
MsG0480019542.01.T01 MTR_8g099605 33.981 206 128 2 133 330 192 397 6.94e-29 117
MsG0480019542.01.T01 MTR_8g099605 33.981 206 128 2 133 330 433 638 9.26e-29 117
MsG0480019542.01.T01 MTR_2g095210 37.908 153 95 0 179 331 482 634 9.63e-29 117
MsG0480019542.01.T01 MTR_7g088850 39.333 150 91 0 180 329 359 508 3.02e-28 115
MsG0480019542.01.T01 MTR_7g088850 30.769 143 97 2 190 332 104 244 2.91e-13 71.2
MsG0480019542.01.T01 MTR_7g096060 39.634 164 92 3 178 336 314 475 4.68e-28 115
MsG0480019542.01.T01 MTR_3g462930 40.741 162 91 3 178 335 378 538 8.23e-28 115
MsG0480019542.01.T01 MTR_2g078630 40.523 153 87 2 180 331 148 297 2.79e-27 113
MsG0480019542.01.T01 MTR_2g078630 40.523 153 87 2 180 331 676 825 4.96e-27 112
MsG0480019542.01.T01 MTR_6g059690 39.264 163 94 3 178 336 271 432 6.30e-27 112
MsG0480019542.01.T01 MTR_2g095320 39.865 148 86 2 182 329 228 372 3.45e-26 110
MsG0480019542.01.T01 MTR_2g095320 32.727 165 97 3 168 331 485 636 4.88e-20 91.7
MsG0480019542.01.T01 MTR_7g089040 41.611 149 86 1 180 328 762 909 6.30e-26 109
MsG0480019542.01.T01 MTR_7g089040 36.842 152 92 2 182 332 463 611 7.13e-19 88.6
MsG0480019542.01.T01 MTR_5g075340 38.788 165 97 2 178 342 303 463 3.16e-25 107
MsG0480019542.01.T01 MTR_4g067100 38.922 167 97 3 180 345 462 624 8.78e-25 106
MsG0480019542.01.T01 MTR_4g067100 38.922 167 97 3 180 345 462 624 8.87e-25 106
MsG0480019542.01.T01 MTR_7g089290 37.419 155 93 4 179 330 742 895 1.55e-24 105
MsG0480019542.01.T01 MTR_7g089290 37.419 155 93 4 179 330 714 867 1.67e-24 105
MsG0480019542.01.T01 MTR_5g075360 38.788 165 97 2 178 342 90 250 6.01e-24 102
MsG0480019542.01.T01 MTR_5g075360 38.788 165 97 2 178 342 140 300 9.25e-24 102
MsG0480019542.01.T01 MTR_5g075360 38.788 165 97 2 178 342 316 476 1.32e-23 102
MsG0480019542.01.T01 MTR_5g075360 38.788 165 97 2 178 342 266 426 1.36e-23 102
MsG0480019542.01.T01 MTR_2g007010 33.484 221 133 6 116 330 253 465 1.45e-23 102
MsG0480019542.01.T01 MTR_2g007010 31.472 197 128 4 135 328 560 752 6.18e-21 94.7
MsG0480019542.01.T01 MTR_5g074850 37.419 155 94 1 181 335 583 734 5.72e-23 100
MsG0480019542.01.T01 MTR_4g088885 38.650 163 87 3 180 330 301 462 6.39e-22 97.4
MsG0480019542.01.T01 MTR_3g023900 40.268 149 83 2 188 330 320 468 4.27e-21 95.1
MsG0480019542.01.T01 MTR_3g023900 28.144 167 99 3 180 328 608 771 1.75e-12 68.9
MsG0480019542.01.T01 MTR_7g088980 41.026 117 69 0 215 331 355 471 1.37e-20 93.2
MsG0480019542.01.T01 MTR_7g088980 34.416 154 95 3 182 331 96 247 1.34e-16 81.3
MsG0480019542.01.T01 MTR_7g088980 41.026 117 69 0 215 331 381 497 1.49e-20 93.2
MsG0480019542.01.T01 MTR_7g088980 34.416 154 95 3 182 331 122 273 1.47e-16 81.3
MsG0480019542.01.T01 MTR_7g088830 35.526 152 97 1 180 331 735 885 4.10e-20 92.0
MsG0480019542.01.T01 MTR_7g088830 32.796 186 99 4 152 331 452 617 1.95e-18 87.0
MsG0480019542.01.T01 MTR_8g056860 35.484 155 87 3 184 329 549 699 4.58e-20 92.0
MsG0480019542.01.T01 MTR_1g088730 36.601 153 89 4 180 329 1010 1157 4.76e-20 92.0
MsG0480019542.01.T01 MTR_7g075520 37.255 153 88 4 180 329 288 435 8.11e-20 90.5
MsG0480019542.01.T01 MTR_5g009840 36.842 152 90 3 180 329 593 740 1.20e-19 90.9
MsG0480019542.01.T01 MTR_4g053350 33.526 173 104 7 180 348 203 368 1.55e-19 89.4
MsG0480019542.01.T01 MTR_4g011810 37.500 160 86 4 180 330 318 472 1.59e-19 90.1
MsG0480019542.01.T01 MTR_4g053350 33.526 173 104 7 180 348 203 368 1.93e-19 89.4
MsG0480019542.01.T01 MTR_1g099470 37.415 147 84 4 180 324 512 652 3.71e-19 89.4
MsG0480019542.01.T01 MTR_3g092070 32.000 225 137 9 111 329 91 305 5.54e-19 87.0
MsG0480019542.01.T01 MTR_1g088750 35.948 153 90 4 180 329 1016 1163 8.22e-19 88.2
MsG0480019542.01.T01 MTR_1g088750 35.948 153 90 4 180 329 967 1114 9.09e-19 88.2
MsG0480019542.01.T01 MTR_3g092070 32.000 225 137 9 111 329 91 305 1.08e-18 86.7
MsG0480019542.01.T01 MTR_8g099065 35.526 152 92 3 180 329 611 758 1.26e-18 87.8
MsG0480019542.01.T01 MTR_3g089100 36.735 147 85 4 180 323 1009 1150 3.14e-18 86.7
MsG0480019542.01.T01 MTR_3g089100 36.735 147 85 4 180 323 980 1121 3.46e-18 86.7
MsG0480019542.01.T01 MTR_3g089100 36.735 147 85 4 180 323 975 1116 3.58e-18 86.3
MsG0480019542.01.T01 MTR_4g096870 35.404 161 92 6 180 335 195 348 5.44e-18 84.7
MsG0480019542.01.T01 MTR_3g092080 35.256 156 90 5 178 329 160 308 5.60e-18 84.3
MsG0480019542.01.T01 MTR_3g092080 35.484 155 89 5 179 329 161 308 5.86e-18 84.7
MsG0480019542.01.T01 MTR_1g101870 36.842 152 89 4 180 329 635 781 8.98e-18 85.1
MsG0480019542.01.T01 MTR_1g101870 36.842 152 89 4 180 329 583 729 9.34e-18 85.1
MsG0480019542.01.T01 MTR_2g086160 31.977 172 108 6 180 348 208 373 1.08e-17 84.0
MsG0480019542.01.T01 MTR_3g104490 36.686 169 81 3 169 336 271 414 1.45e-17 84.3
MsG0480019542.01.T01 MTR_2g086160 35.862 145 84 6 180 321 208 346 3.66e-17 82.0
MsG0480019542.01.T01 MTR_6g033740 34.868 152 92 4 180 329 577 723 6.92e-17 82.4
MsG0480019542.01.T01 MTR_2g024440 36.986 146 81 6 180 323 299 435 1.07e-16 81.3
MsG0480019542.01.T01 MTR_2g024440 36.986 146 81 6 180 323 382 518 1.33e-16 81.3
MsG0480019542.01.T01 MTR_2g024440 36.986 146 81 6 180 323 381 517 1.43e-16 81.3
MsG0480019542.01.T01 MTR_3g023890 30.769 169 94 3 180 328 462 627 3.03e-16 80.5
MsG0480019542.01.T01 MTR_3g023890 36.601 153 83 4 188 330 175 323 7.70e-16 79.0
MsG0480019542.01.T01 MTR_8g469460 34.286 175 80 4 169 342 271 411 4.51e-16 79.7
MsG0480019542.01.T01 MTR_1g099480 36.364 154 89 5 179 329 545 692 8.50e-16 79.0
MsG0480019542.01.T01 MTR_6g023855 32.386 176 112 5 157 329 300 471 2.59e-15 77.4
MsG0480019542.01.T01 MTR_6g023875 30.366 191 123 6 157 343 436 620 3.30e-14 73.9
MsG0480019542.01.T01 MTR_1g080430 33.036 112 75 0 175 286 749 860 2.67e-12 68.6
MsG0480019542.01.T01 MTR_1g080430 33.036 112 75 0 175 286 749 860 3.15e-12 68.2
MsG0480019542.01.T01 MTR_6g023865 30.570 193 106 7 157 329 212 396 8.13e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480019542.01.T01 AT3G05530 90.556 180 16 1 1 179 1 180 8.86e-110 327
MsG0480019542.01.T01 AT3G05530 98.734 158 2 0 178 335 243 400 2.20e-108 323
MsG0480019542.01.T01 AT1G09100 91.061 179 16 0 1 179 1 179 1.82e-109 326
MsG0480019542.01.T01 AT1G09100 97.468 158 4 0 178 335 242 399 2.61e-105 315
MsG0480019542.01.T01 AT4G29040 35.854 357 144 5 37 329 76 411 1.50e-60 201
MsG0480019542.01.T01 AT2G20140 35.013 377 157 6 37 346 76 431 1.67e-60 201
MsG0480019542.01.T01 AT5G19990 56.875 160 68 1 178 336 175 334 1.11e-57 191
MsG0480019542.01.T01 AT5G20000 56.875 160 68 1 178 336 233 392 3.80e-57 191
MsG0480019542.01.T01 AT5G19990 56.875 160 68 1 178 336 233 392 3.96e-57 191
MsG0480019542.01.T01 AT5G19990 56.875 160 68 1 178 336 233 392 3.96e-57 191
MsG0480019542.01.T01 AT1G53750 52.542 177 81 1 172 345 234 410 1.38e-56 190
MsG0480019542.01.T01 AT5G43010 54.000 150 69 0 180 329 213 362 6.88e-55 185
MsG0480019542.01.T01 AT1G45000 54.000 150 69 0 180 329 213 362 6.96e-55 185
MsG0480019542.01.T01 AT1G53780 52.632 171 78 1 178 345 412 582 1.57e-52 183
MsG0480019542.01.T01 AT1G53780 52.632 171 78 1 178 345 412 582 1.57e-52 183
MsG0480019542.01.T01 AT1G53780 52.632 171 78 1 178 345 411 581 1.63e-52 183
MsG0480019542.01.T01 AT1G53780 52.632 171 78 1 178 345 433 603 1.83e-52 183
MsG0480019542.01.T01 AT5G58290 42.174 230 125 4 103 331 158 380 3.65e-52 178
MsG0480019542.01.T01 AT1G50250 45.402 174 92 2 178 348 333 506 5.45e-41 152
MsG0480019542.01.T01 AT5G42270 44.828 174 93 2 178 348 321 494 1.12e-40 152
MsG0480019542.01.T01 AT1G06430 44.025 159 89 0 178 336 291 449 2.07e-36 139
MsG0480019542.01.T01 AT1G06430 44.025 159 89 0 178 336 291 449 2.07e-36 139
MsG0480019542.01.T01 AT1G06430 44.025 159 89 0 178 336 291 449 2.07e-36 139
MsG0480019542.01.T01 AT2G30950 44.025 159 89 0 178 336 298 456 5.24e-36 138
MsG0480019542.01.T01 AT2G30950 44.025 159 89 0 178 336 298 456 5.24e-36 138
MsG0480019542.01.T01 AT2G30950 44.025 159 89 0 178 336 298 456 5.24e-36 138
MsG0480019542.01.T01 AT2G30950 44.025 159 89 0 178 336 302 460 5.86e-36 138
MsG0480019542.01.T01 AT5G15250 44.444 153 85 0 178 330 295 447 4.40e-34 133
MsG0480019542.01.T01 AT5G53170 47.482 139 69 1 178 316 433 567 9.49e-33 129
MsG0480019542.01.T01 AT2G03670 42.581 155 88 1 178 331 358 512 3.11e-32 127
MsG0480019542.01.T01 AT2G03670 36.420 162 98 2 182 339 98 258 3.64e-25 107
MsG0480019542.01.T01 AT3G16290 42.169 166 95 1 178 343 481 645 2.64e-31 125
MsG0480019542.01.T01 AT1G07510 41.975 162 91 2 178 336 398 559 2.79e-30 122
MsG0480019542.01.T01 AT5G64580 43.125 160 85 3 178 331 387 546 2.95e-30 122
MsG0480019542.01.T01 AT2G26140 44.242 165 88 2 178 342 298 458 3.17e-30 122
MsG0480019542.01.T01 AT5G15250 39.205 176 84 2 178 330 295 470 3.33e-30 120
MsG0480019542.01.T01 AT3G47060 41.615 161 91 2 178 335 396 556 3.57e-30 122
MsG0480019542.01.T01 AT3G02450 42.857 161 87 2 178 336 405 562 1.87e-29 119
MsG0480019542.01.T01 AT5G58870 42.945 163 86 4 178 335 400 560 1.92e-29 119
MsG0480019542.01.T01 AT3G53230 37.908 153 95 0 179 331 554 706 3.90e-29 119
MsG0480019542.01.T01 AT3G53230 39.865 148 86 2 182 329 284 428 6.41e-26 109
MsG0480019542.01.T01 AT2G29080 40.000 170 99 2 178 345 393 561 6.40e-28 115
MsG0480019542.01.T01 AT5G03340 37.255 153 96 0 179 331 553 705 6.90e-28 115
MsG0480019542.01.T01 AT5G03340 39.865 148 86 2 182 329 283 427 2.99e-26 110
MsG0480019542.01.T01 AT3G56690 41.447 152 85 2 180 330 458 606 1.58e-27 114
MsG0480019542.01.T01 AT3G56690 40.940 149 87 1 180 328 798 945 2.46e-25 107
MsG0480019542.01.T01 AT4G23940 32.127 221 139 3 123 335 449 666 1.66e-27 114
MsG0480019542.01.T01 AT3G15120 40.523 153 85 3 180 330 808 956 9.23e-27 112
MsG0480019542.01.T01 AT3G15120 40.523 153 85 3 180 330 798 946 1.01e-26 112
MsG0480019542.01.T01 AT3G09840 39.865 148 86 2 182 329 283 427 3.13e-26 110
MsG0480019542.01.T01 AT3G09840 35.714 154 98 1 179 331 553 706 1.77e-25 108
MsG0480019542.01.T01 AT2G03670 36.420 162 98 2 182 339 98 258 1.61e-25 106
MsG0480019542.01.T01 AT5G08470 41.176 153 81 4 180 329 918 1064 3.43e-24 104
MsG0480019542.01.T01 AT5G08470 41.176 153 81 4 180 329 909 1055 3.62e-24 104
MsG0480019542.01.T01 AT1G05910 38.272 162 95 3 180 340 460 617 1.04e-23 103
MsG0480019542.01.T01 AT3G01610 40.260 154 77 3 188 330 315 464 1.97e-22 99.0
MsG0480019542.01.T01 AT3G01610 34.667 150 93 3 180 328 602 747 2.44e-20 92.8
MsG0480019542.01.T01 AT3G01610 40.260 154 77 3 188 330 315 464 2.01e-22 99.0
MsG0480019542.01.T01 AT3G01610 34.667 150 93 3 180 328 602 747 2.32e-20 92.8
MsG0480019542.01.T01 AT1G03000 34.591 159 100 4 179 334 730 887 5.91e-22 97.8
MsG0480019542.01.T01 AT5G53540 30.290 241 150 9 94 329 81 308 1.13e-20 92.8
MsG0480019542.01.T01 AT4G27680 30.705 241 149 9 94 329 78 305 1.92e-20 92.0
MsG0480019542.01.T01 AT4G02480 36.601 153 89 4 180 329 1038 1185 1.95e-20 93.2
MsG0480019542.01.T01 AT1G45000 62.295 61 23 0 180 240 213 273 2.01e-20 91.3
MsG0480019542.01.T01 AT4G04910 36.810 163 90 3 180 330 291 452 6.11e-20 91.7
MsG0480019542.01.T01 AT2G45500 33.974 156 89 5 180 329 156 303 2.29e-19 88.2
MsG0480019542.01.T01 AT2G45500 33.974 156 89 5 180 329 156 303 2.29e-19 88.2
MsG0480019542.01.T01 AT1G02890 36.601 153 89 4 180 329 1019 1166 2.31e-19 90.1
MsG0480019542.01.T01 AT1G80350 38.125 160 85 4 180 330 312 466 2.98e-19 89.4
MsG0480019542.01.T01 AT2G45500 33.974 156 89 5 180 329 289 436 4.85e-19 88.6
MsG0480019542.01.T01 AT2G45500 33.974 156 89 5 180 329 299 446 4.95e-19 88.6
MsG0480019542.01.T01 AT2G45500 33.974 156 89 5 180 329 293 440 5.34e-19 88.2
MsG0480019542.01.T01 AT1G50140 37.162 148 85 4 180 324 789 931 5.45e-19 89.0
MsG0480019542.01.T01 AT1G50140 37.162 148 85 4 180 324 789 931 5.45e-19 89.0
MsG0480019542.01.T01 AT1G50140 37.162 148 85 4 180 324 789 931 5.45e-19 89.0
MsG0480019542.01.T01 AT1G50140 37.162 148 85 4 180 324 767 909 5.99e-19 88.6
MsG0480019542.01.T01 AT1G50140 37.162 148 85 4 180 324 767 909 5.99e-19 88.6
MsG0480019542.01.T01 AT1G79560 31.481 162 98 2 183 335 568 725 6.23e-19 88.6
MsG0480019542.01.T01 AT1G79560 31.677 161 97 2 184 335 569 725 6.77e-19 88.6
MsG0480019542.01.T01 AT1G79560 31.677 161 97 2 184 335 569 725 7.07e-19 88.6
MsG0480019542.01.T01 AT4G24860 34.459 148 89 4 180 324 895 1037 2.87e-18 86.7
MsG0480019542.01.T01 AT4G24860 34.459 148 89 4 180 324 893 1035 2.90e-18 86.7
MsG0480019542.01.T01 AT4G24860 34.694 147 88 4 180 323 868 1009 3.07e-18 86.7
MsG0480019542.01.T01 AT4G24860 34.694 147 88 4 180 323 891 1032 3.12e-18 86.7
MsG0480019542.01.T01 AT4G28000 35.000 160 97 4 180 337 592 746 3.38e-18 86.3
MsG0480019542.01.T01 AT4G28000 35.000 160 97 4 180 337 594 748 3.49e-18 86.3
MsG0480019542.01.T01 AT4G28000 35.000 160 97 4 180 337 594 748 3.58e-18 86.3
MsG0480019542.01.T01 AT2G27600 33.537 164 96 7 180 338 205 360 7.89e-18 84.7
MsG0480019542.01.T01 AT2G34560 32.934 167 106 3 180 345 176 337 5.74e-17 81.6
MsG0480019542.01.T01 AT2G34560 32.934 167 106 3 180 345 185 346 5.96e-17 81.6
MsG0480019542.01.T01 AT3G19740 34.667 150 86 4 180 324 779 921 8.63e-17 82.4
MsG0480019542.01.T01 AT1G64110 34.211 152 94 3 180 329 590 737 1.40e-16 81.6
MsG0480019542.01.T01 AT1G64110 34.211 152 94 3 180 329 593 740 1.40e-16 81.6
MsG0480019542.01.T01 AT1G64110 34.211 152 94 3 180 329 593 740 1.40e-16 81.6
MsG0480019542.01.T01 AT1G64110 34.211 152 94 3 180 329 595 742 1.45e-16 81.6
MsG0480019542.01.T01 AT1G64110 34.211 152 94 3 180 329 595 742 1.45e-16 81.6
MsG0480019542.01.T01 AT5G52882 33.553 152 94 4 180 329 591 737 6.62e-16 79.3
MsG0480019542.01.T01 AT3G27120 33.333 177 108 6 157 329 454 624 1.09e-15 78.6
MsG0480019542.01.T01 AT1G62130 30.178 169 104 3 157 323 801 957 1.73e-14 75.1
MsG0480019542.01.T01 AT1G62130 30.178 169 104 3 157 323 794 950 1.74e-14 75.1
MsG0480019542.01.T01 AT4G04180 35.211 142 83 6 180 320 401 534 1.90e-13 71.6
MsG0480019542.01.T01 AT4G04180 35.211 142 83 6 180 320 396 529 2.02e-13 71.6
MsG0480019542.01.T01 AT3G04340 34.513 113 74 0 175 287 853 965 3.37e-13 71.2

Find 118 sgRNAs with CRISPR-Local

Find 328 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTAAATTATAGTCGTTTA+AGG 0.102919 4:+21883009 MsG0480019542.01.T01:three_prime_UTR
ATTCAAATTTCGTAAGATTA+AGG 0.161808 4:-21879236 None:intergenic
AGTAAAATTCTCTTCAATTA+TGG 0.188434 4:-21882731 None:intergenic
TTCCGAAATCTGCGACTATT+TGG 0.195775 4:+21879196 MsG0480019542.01.T01:five_prime_UTR
GAACCAAAATTAATTGTTAT+TGG 0.196021 4:-21882624 None:intergenic
GATTGACATTTAACAAATTC+AGG 0.197704 4:+21878980 None:intergenic
GGCCAAGAGAAAGCCTAATT+TGG 0.211357 4:+21883778 MsG0480019542.01.T01:three_prime_UTR
TTACCAATAACAATTAATTT+TGG 0.215777 4:+21882621 MsG0480019542.01.T01:three_prime_UTR
TCTTCCTCAGCCTCATCTTC+TGG 0.221171 4:-21880117 None:intergenic
TAGTCGCAGATTTCGGAATT+AGG 0.247271 4:-21879191 None:intergenic
TAGCAGCGACGACCGGATTA+AGG 0.257823 4:+21881872 MsG0480019542.01.T01:CDS
AATTTGAATTGAAATAATTA+TGG 0.259978 4:+21879250 MsG0480019542.01.T01:exon
CGGTGCTCATATTAGCTAAT+TGG 0.286567 4:-21879310 None:intergenic
TATATCTTGTAAGATGATTC+AGG 0.291666 4:-21882553 None:intergenic
AGGTTTGTGCACGGTTATTA+AGG 0.292250 4:+21883029 MsG0480019542.01.T01:three_prime_UTR
GGCTTGCTTTCTTCTTTGCT+TGG 0.296463 4:-21883685 None:intergenic
TTCAAATTTCGTAAGATTAA+GGG 0.308753 4:-21879235 None:intergenic
TGGTAATTTACACACTTCAT+AGG 0.320076 4:-21882604 None:intergenic
AGAGAAGATTAAAGAGAATC+AGG 0.321169 4:+21879518 MsG0480019542.01.T01:CDS
ACGATATTTCTTCCAGTTGT+TGG 0.323602 4:+21880346 MsG0480019542.01.T01:CDS
GAATTCAGCAGTAGCAGATT+AGG 0.328155 4:-21879162 None:intergenic
CAAAGATAGTTACTTAATCT+TGG 0.330624 4:+21880417 MsG0480019542.01.T01:CDS
ATCCAAATAGTCGCAGATTT+CGG 0.353426 4:-21879198 None:intergenic
AATGCATGGTGACTTCTCTT+TGG 0.358903 4:-21881571 None:intergenic
GAGTTGCTCAATCAGCTTGA+TGG 0.362416 4:+21881846 MsG0480019542.01.T01:CDS
GATCCTGCCCTCATGCGTTC+TGG 0.363815 4:+21882193 MsG0480019542.01.T01:CDS
AGTTCTTCAAAGTTTACATC+TGG 0.367362 4:-21882399 None:intergenic
AATTCAGCAGTAGCAGATTA+GGG 0.367587 4:-21879161 None:intergenic
TAGCTTAAGCATAATAGTTC+AGG 0.374037 4:-21883706 None:intergenic
CTAGCTCTTGCTTCTTCAGT+TGG 0.375196 4:-21882247 None:intergenic
GAAAACGAAACTAAGTTGTT+GGG 0.387513 4:-21882693 None:intergenic
GAACATTCATCTTCCTTGAA+TGG 0.391870 4:-21882374 None:intergenic
GCCAAGAGAAAGCCTAATTT+GGG 0.394279 4:+21883779 MsG0480019542.01.T01:three_prime_UTR
AACAATGTTACCAACGAGAT+AGG 0.403098 4:-21879568 None:intergenic
AGAGTTGCAGAGGACGAATC+TGG 0.406455 4:+21879479 MsG0480019542.01.T01:CDS
CCCCAAATTAGGCTTTCTCT+TGG 0.406779 4:-21883780 None:intergenic
TGAAAACGAAACTAAGTTGT+TGG 0.412699 4:-21882694 None:intergenic
TAGCTCTTGCTTCTTCAGTT+GGG 0.414601 4:-21882246 None:intergenic
AAGGAAATTCCCACATCAAC+AGG 0.416237 4:-21883598 None:intergenic
CTGTGTTGAGGCTGGCATGC+TGG 0.423524 4:+21882467 MsG0480019542.01.T01:CDS
AGCTTGATAGTTATACGTTT+AGG 0.426644 4:+21883400 MsG0480019542.01.T01:intron
TTATTAAGGAAATGATTAGT+TGG 0.427835 4:+21883043 MsG0480019542.01.T01:three_prime_UTR
TTCCCTTCCTTTGTGAGTCA+AGG 0.435700 4:-21880155 None:intergenic
TATTAAGGAAATGATTAGTT+GGG 0.436436 4:+21883044 MsG0480019542.01.T01:three_prime_UTR
ATAGATGAAATCGATGCAAT+TGG 0.444462 4:+21881600 MsG0480019542.01.T01:CDS
CTTCTCTTTGGCAAGTTGGA+AGG 0.457958 4:-21881559 None:intergenic
AATTCTGTACAGATGTTCAT+AGG 0.458044 4:+21881510 MsG0480019542.01.T01:intron
ATTGACATTTAACAAATTCA+GGG 0.458064 4:+21878981 None:intergenic
CCTCATGCGTTCTGGTCGAT+TGG 0.460311 4:+21882201 MsG0480019542.01.T01:CDS
GTGACTTCTCTTTGGCAAGT+TGG 0.464732 4:-21881563 None:intergenic
TGAGTATGATTCTAGAGTTA+AGG 0.468971 4:+21880453 MsG0480019542.01.T01:CDS
GGGTCAACAAGTCCAACAAC+TGG 0.470215 4:-21880358 None:intergenic
CGCAGATTTCGGAATTAGGT+TGG 0.470451 4:-21879187 None:intergenic
AGCAAGAGCTAGAATTCTGC+AGG 0.476446 4:+21882258 MsG0480019542.01.T01:CDS
CTTGCTTCTTCAGTTGGGTG+AGG 0.478295 4:-21882241 None:intergenic
CTAAAACCTGGTGATCTTGT+TGG 0.482397 4:+21880388 MsG0480019542.01.T01:CDS
GCAGTGAAGTGAGTGGGGAC+AGG 0.483517 4:+21881802 MsG0480019542.01.T01:intron
GAAGATGAGGCTGAGGAAGA+TGG 0.509624 4:+21880120 MsG0480019542.01.T01:CDS
CTTATATTACCTGTTGATGT+GGG 0.511695 4:+21883589 MsG0480019542.01.T01:three_prime_UTR
AATTAAGACAAACCTTAATC+CGG 0.519105 4:-21881884 None:intergenic
CATTGGTGGATTAGAGAAGC+AGG 0.519493 4:+21880516 MsG0480019542.01.T01:CDS
GTTCTTCAAAGTTTACATCT+GGG 0.520737 4:-21882398 None:intergenic
CGACCAGAACGCATGAGGGC+AGG 0.522529 4:-21882196 None:intergenic
GAATCCAGAAGATGAGGCTG+AGG 0.527306 4:+21880113 MsG0480019542.01.T01:CDS
AAAAGGTTGGACATTCGTCC+TGG 0.527602 4:+21882660 MsG0480019542.01.T01:intron
TCTTATATTACCTGTTGATG+TGG 0.530335 4:+21883588 MsG0480019542.01.T01:three_prime_UTR
ATGTCATTGTAGTCCTCTGT+TGG 0.531591 4:-21880496 None:intergenic
GTACAGATGTTCATAGGAGA+TGG 0.532202 4:+21881516 MsG0480019542.01.T01:intron
TGGTATTTCAGATCCATTCA+AGG 0.533766 4:+21882361 MsG0480019542.01.T01:intron
TGACCTTGACTCACAAAGGA+AGG 0.537457 4:+21880152 MsG0480019542.01.T01:CDS
AAAACGAAACTAAGTTGTTG+GGG 0.547574 4:-21882692 None:intergenic
CAGTGAAGTGAGTGGGGACA+GGG 0.551580 4:+21881803 MsG0480019542.01.T01:intron
AATAATTATGGCGAGTGCAA+TGG 0.555788 4:+21879262 MsG0480019542.01.T01:exon
ACAATGTTACCAACGAGATA+GGG 0.555893 4:-21879567 None:intergenic
ATAAGAAGCAAATTATATGT+TGG 0.557362 4:-21883571 None:intergenic
TCTCGTTGGTAACATTGTTG+AGG 0.560104 4:+21879572 MsG0480019542.01.T01:CDS
AAAGCCGTCTGTGTTGAGGC+TGG 0.560514 4:+21882459 MsG0480019542.01.T01:CDS
CAACGAGATTCGCATCCTCA+AGG 0.561580 4:+21879364 MsG0480019542.01.T01:CDS
ATATCTTGTAAGATGATTCA+GGG 0.563036 4:-21882552 None:intergenic
GAGGACTACAATGACATTGG+TGG 0.570848 4:+21880502 MsG0480019542.01.T01:CDS
CTGATTGCAGTGAAGTGAGT+GGG 0.574960 4:+21881796 MsG0480019542.01.T01:intron
GCGAGTGCAATGGTAGAAGA+TGG 0.575441 4:+21879272 MsG0480019542.01.T01:CDS
CATGCCAGCCTCAACACAGA+CGG 0.581280 4:-21882463 None:intergenic
GACCTTGACTCACAAAGGAA+GGG 0.581845 4:+21880153 MsG0480019542.01.T01:CDS
AACCACGAGGACTTTAATGA+AGG 0.588663 4:+21883650 MsG0480019542.01.T01:three_prime_UTR
TTTACACCAACAAGATCACC+AGG 0.590492 4:-21880394 None:intergenic
GGAGATGAATCCAGAAGATG+AGG 0.594465 4:+21880107 MsG0480019542.01.T01:CDS
CCAATCGACCAGAACGCATG+AGG 0.596935 4:-21882201 None:intergenic
CGACTATAATTTAGAGACGG+AGG 0.604117 4:-21883002 None:intergenic
ACTCTAGAATCATACTCAGA+AGG 0.604623 4:-21880448 None:intergenic
AAACAATTACCCTATCTCGT+TGG 0.607535 4:+21879558 MsG0480019542.01.T01:CDS
TCATCTATAAATATAATGCA+TGG 0.609735 4:-21881585 None:intergenic
TCTGCGCCGTGATGCAACTG+AGG 0.612763 4:+21882491 MsG0480019542.01.T01:CDS
TGATTCTAGAGTTAAGGCCA+TGG 0.615473 4:+21880459 MsG0480019542.01.T01:CDS
TGATGCAGGAAGAGTTGCAG+AGG 0.615725 4:+21879469 MsG0480019542.01.T01:intron
GACTATAATTTAGAGACGGA+GGG 0.622572 4:-21883001 None:intergenic
TAAACTTTGAAGAACTCGCT+CGG 0.623074 4:+21882406 MsG0480019542.01.T01:CDS
AACAAACCTCAGTTGCATCA+CGG 0.628397 4:-21882497 None:intergenic
TACCTTCATTAAAGTCCTCG+TGG 0.630738 4:-21883652 None:intergenic
AAACGACTATAATTTAGAGA+CGG 0.633680 4:-21883005 None:intergenic
ACAGAGGACTACAATGACAT+TGG 0.634206 4:+21880499 MsG0480019542.01.T01:CDS
CAATCGACCAGAACGCATGA+GGG 0.635061 4:-21882200 None:intergenic
ACTGAAAGCCGTCTGTGTTG+AGG 0.637310 4:+21882455 MsG0480019542.01.T01:CDS
GACCCTGACAAGCTAAAACC+TGG 0.638981 4:+21880376 MsG0480019542.01.T01:CDS
AGTCGTTTAAGGTTTGTGCA+CGG 0.643967 4:+21883020 MsG0480019542.01.T01:three_prime_UTR
ATATTGACCTTGACTCACAA+AGG 0.658818 4:+21880148 MsG0480019542.01.T01:CDS
AGAAGCTCTGACGATATCAT+CGG 0.668543 4:-21879330 None:intergenic
TGCACCGTTGAAATCATCTG+TGG 0.672796 4:-21882430 None:intergenic
CGGTCCACAGATGATTTCAA+CGG 0.677024 4:+21882426 MsG0480019542.01.T01:CDS
CAAGAGAAAGCCTAATTTGG+GGG 0.677656 4:+21883781 MsG0480019542.01.T01:three_prime_UTR
TGAAGTGAGTGGGGACAGGG+AGG 0.681980 4:+21881806 MsG0480019542.01.T01:CDS
AAACGAAACTAAGTTGTTGG+GGG 0.689586 4:-21882691 None:intergenic
GCTGATTGCAGTGAAGTGAG+TGG 0.691249 4:+21881795 MsG0480019542.01.T01:intron
GGTGAGGAAACTCAATCTTG+CGG 0.696112 4:-21882225 None:intergenic
CCAAGAGAAAGCCTAATTTG+GGG 0.703720 4:+21883780 MsG0480019542.01.T01:three_prime_UTR
TGATTGCAGTGAAGTGAGTG+GGG 0.708476 4:+21881797 MsG0480019542.01.T01:intron
AGTTGATGAAAAGCCAACAG+AGG 0.711108 4:+21880483 MsG0480019542.01.T01:CDS
TCAAATGTAGGTGAACCACG+AGG 0.808374 4:+21883637 MsG0480019542.01.T01:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTTGAATTGAAATAATTA+TGG + Chr4:21879250-21879269 MsG0480019542.01.T01:exon 10.0%
!! CACAATATAAATAAATTATA+AGG - Chr4:21881775-21881794 None:intergenic 10.0%
!! CTTATAATTTATTTATATTG+TGG + Chr4:21881773-21881792 MsG0480019542.01.T01:intron 10.0%
!!! TAAGTTTATATAATTTTAGT+TGG + Chr4:21882803-21882822 MsG0480019542.01.T01:intron 10.0%
!! ATTCATATTAAAAACATAAG+TGG - Chr4:21880564-21880583 None:intergenic 15.0%
!! TTAAAAAAGTTGTTAAATGA+AGG - Chr4:21882042-21882061 None:intergenic 15.0%
!!! AAATTTTAATACATACATCA+TGG + Chr4:21882873-21882892 MsG0480019542.01.T01:three_prime_UTR 15.0%
!!! AAGAAAAAGTATTGAATTTA+TGG - Chr4:21880316-21880335 None:intergenic 15.0%
!!! AATAAATAAGGGTATATTAA+TGG + Chr4:21883152-21883171 MsG0480019542.01.T01:intron 15.0%
!!! AGAATTTTACTAATTTTAGT+TGG + Chr4:21882743-21882762 MsG0480019542.01.T01:intron 15.0%
!!! ATGTTTTTAATATGAATTTG+TGG + Chr4:21880567-21880586 MsG0480019542.01.T01:intron 15.0%
!!! ATTCATTTTTCTACTTATTA+GGG + Chr4:21879415-21879434 MsG0480019542.01.T01:intron 15.0%
!!! ATTGCTTTTAATTGTATATA+GGG + Chr4:21879650-21879669 MsG0480019542.01.T01:intron 15.0%
!!! TATTGCTTTTAATTGTATAT+AGG + Chr4:21879649-21879668 MsG0480019542.01.T01:intron 15.0%
!!! TGAATTTATATTTTTGTCTT+GGG + Chr4:21881462-21881481 MsG0480019542.01.T01:intron 15.0%
!!! TTACCAATAACAATTAATTT+TGG + Chr4:21882621-21882640 MsG0480019542.01.T01:three_prime_UTR 15.0%
!!! TTGAATTTATATTTTTGTCT+TGG + Chr4:21881461-21881480 MsG0480019542.01.T01:intron 15.0%
!! AAAAATAATAAATGCTGCAT+TGG + Chr4:21883177-21883196 MsG0480019542.01.T01:intron 20.0%
!! AAAGAAAAAACAGATTTAGA+TGG - Chr4:21881121-21881140 None:intergenic 20.0%
!! AATTAGATAGATTTAGAAGT+TGG + Chr4:21882096-21882115 MsG0480019542.01.T01:intron 20.0%
!! AATTGAATAGTTGTACAATT+GGG + Chr4:21881230-21881249 MsG0480019542.01.T01:intron 20.0%
!! AGAAAAATGAATGAATAAAG+AGG - Chr4:21879407-21879426 None:intergenic 20.0%
!! AGCAAATAGATATATATACA+AGG - Chr4:21880010-21880029 None:intergenic 20.0%
!! AGTAAAATTCTCTTCAATTA+TGG - Chr4:21882734-21882753 None:intergenic 20.0%
!! ATAAGAAGCAAATTATATGT+TGG - Chr4:21883574-21883593 None:intergenic 20.0%
!! ATTCAAATTTCGTAAGATTA+AGG - Chr4:21879239-21879258 None:intergenic 20.0%
!! ATTCAATTTATAAAGGAATG+AGG - Chr4:21881447-21881466 None:intergenic 20.0%
!! CAAATAGATATATATACAAG+GGG - Chr4:21880008-21880027 None:intergenic 20.0%
!! CAAATGAAAACCTATAAATT+TGG - Chr4:21882124-21882143 None:intergenic 20.0%
!! CTCAAAAAAAAAAAAAAGGT+TGG + Chr4:21882647-21882666 MsG0480019542.01.T01:intron 20.0%
!! GAACCAAAATTAATTGTTAT+TGG - Chr4:21882627-21882646 None:intergenic 20.0%
!! GCAAATAGATATATATACAA+GGG - Chr4:21880009-21880028 None:intergenic 20.0%
!! GGATGAAATTCAATAAATAA+GGG + Chr4:21883141-21883160 MsG0480019542.01.T01:intron 20.0%
!! GTTCCTCAAAAAAAAAAAAA+AGG + Chr4:21882643-21882662 MsG0480019542.01.T01:intron 20.0%
!! TCAGAAATATCTATACATAA+TGG - Chr4:21881148-21881167 None:intergenic 20.0%
!! TCATCTATAAATATAATGCA+TGG - Chr4:21881588-21881607 None:intergenic 20.0%
!! TGAAACAAAAAGAAATAGAA+AGG - Chr4:21883620-21883639 None:intergenic 20.0%
!! TGGATGAAATTCAATAAATA+AGG + Chr4:21883140-21883159 MsG0480019542.01.T01:intron 20.0%
!! TTATTAAGGAAATGATTAGT+TGG + Chr4:21883043-21883062 MsG0480019542.01.T01:three_prime_UTR 20.0%
!! TTCAAATTTCGTAAGATTAA+GGG - Chr4:21879238-21879257 None:intergenic 20.0%
!! TTCAATTTATAAAGGAATGA+GGG - Chr4:21881446-21881465 None:intergenic 20.0%
!! TTTAGATTGTAAAAATACTG+TGG + Chr4:21881738-21881757 MsG0480019542.01.T01:intron 20.0%
!!! AATTTTGTGCATTTAGATAT+TGG + Chr4:21880086-21880105 MsG0480019542.01.T01:intron 20.0%
!!! ACAATAACTCTTTTGATATA+AGG - Chr4:21879848-21879867 None:intergenic 20.0%
!!! ATGTTTTTTATGGTTTTTCT+GGG + Chr4:21880055-21880074 MsG0480019542.01.T01:intron 20.0%
!!! ATTTTATTAAGATGCCAAAT+TGG - Chr4:21883372-21883391 None:intergenic 20.0%
!!! CAACCTTTTTTTTTTTTTTG+AGG - Chr4:21882649-21882668 None:intergenic 20.0%
!!! CATTCATTTTTCTACTTATT+AGG + Chr4:21879414-21879433 MsG0480019542.01.T01:intron 20.0%
!!! GAAAAAGAGTGTATATTTTA+AGG + Chr4:21879087-21879106 MsG0480019542.01.T01:five_prime_UTR 20.0%
!!! TATGTTTTTTATGGTTTTTC+TGG + Chr4:21880054-21880073 MsG0480019542.01.T01:intron 20.0%
!!! TATTAAGGAAATGATTAGTT+GGG + Chr4:21883044-21883063 MsG0480019542.01.T01:three_prime_UTR 20.0%
!!! TCTTAATTTTCTTATCTGTA+TGG + Chr4:21881899-21881918 MsG0480019542.01.T01:intron 20.0%
!!! TGTATGGTATATTTTTATTG+AGG + Chr4:21881915-21881934 MsG0480019542.01.T01:intron 20.0%
!!! TTTCTTTTTGTTTCAAATGT+AGG + Chr4:21883625-21883644 MsG0480019542.01.T01:three_prime_UTR 20.0%
! AAACGACTATAATTTAGAGA+CGG - Chr4:21883008-21883027 None:intergenic 25.0%
! AAATGACAATTATTGTGAGA+CGG + Chr4:21883244-21883263 MsG0480019542.01.T01:intron 25.0%
! AAGAGTTATTGTGAGTATTA+AGG + Chr4:21879856-21879875 MsG0480019542.01.T01:intron 25.0%
! AATGAAGGTCAACAAAATTA+TGG - Chr4:21882027-21882046 None:intergenic 25.0%
! AATTAAGACAAACCTTAATC+CGG - Chr4:21881887-21881906 None:intergenic 25.0%
! ACAATAAGTAAGTCTATTGA+AGG - Chr4:21879816-21879835 None:intergenic 25.0%
! AGAGTTATTGTGAGTATTAA+GGG + Chr4:21879857-21879876 MsG0480019542.01.T01:intron 25.0%
! ATAACATATTCATAGTTAGG+AGG + Chr4:21880255-21880274 MsG0480019542.01.T01:intron 25.0%
! ATATACCATTTCATCATGTT+TGG + Chr4:21880219-21880238 MsG0480019542.01.T01:intron 25.0%
! ATATCTTGTAAGATGATTCA+GGG - Chr4:21882555-21882574 None:intergenic 25.0%
! ATGAAGGTCAACAAAATTAT+GGG - Chr4:21882026-21882045 None:intergenic 25.0%
! CAAAAATGGCAAAATCATTA+TGG - Chr4:21883529-21883548 None:intergenic 25.0%
! CAAAGATAGTTACTTAATCT+TGG + Chr4:21880417-21880436 MsG0480019542.01.T01:CDS 25.0%
! CAATTGAATAGTTGTACAAT+TGG + Chr4:21881229-21881248 MsG0480019542.01.T01:intron 25.0%
! CCACTAACTACAATTAATAA+GGG - Chr4:21883109-21883128 None:intergenic 25.0%
! CTAGTGATTCTGTATAAATA+GGG - Chr4:21881018-21881037 None:intergenic 25.0%
! CTCTAAATTATAGTCGTTTA+AGG + Chr4:21883009-21883028 MsG0480019542.01.T01:three_prime_UTR 25.0%
! CTGAAAATAACAGAAAATTC+AGG - Chr4:21881256-21881275 None:intergenic 25.0%
! GCAATAACATATTCATAGTT+AGG + Chr4:21880252-21880271 MsG0480019542.01.T01:intron 25.0%
! TATACCATTTCATCATGTTT+GGG + Chr4:21880220-21880239 MsG0480019542.01.T01:intron 25.0%
! TATATCTTGTAAGATGATTC+AGG - Chr4:21882556-21882575 None:intergenic 25.0%
! TATGGCAAAAACCATATAAA+AGG - Chr4:21883511-21883530 None:intergenic 25.0%
! TATGTATGATAGATGAATAC+TGG + Chr4:21881947-21881966 MsG0480019542.01.T01:intron 25.0%
! TCAAAAATTCAACCAAAATC+AGG - Chr4:21879452-21879471 None:intergenic 25.0%
! TCAATTGTATTAGAAAACGA+TGG - Chr4:21881216-21881235 None:intergenic 25.0%
! TCCACTAACTACAATTAATA+AGG - Chr4:21883110-21883129 None:intergenic 25.0%
! TCTTAGTACATAAAGGATAA+AGG + Chr4:21880921-21880940 MsG0480019542.01.T01:intron 25.0%
! TTGATGTTCTTAGTACATAA+AGG + Chr4:21880914-21880933 MsG0480019542.01.T01:intron 25.0%
!! AATTGTATATAGGGAGTTTT+GGG + Chr4:21879659-21879678 MsG0480019542.01.T01:intron 25.0%
!! CATAAAAAACATATCGATTG+TGG - Chr4:21880047-21880066 None:intergenic 25.0%
!! GTAGTTTCAAACCTTTTATA+TGG + Chr4:21883497-21883516 MsG0480019542.01.T01:three_prime_UTR 25.0%
!! TAATTGTATATAGGGAGTTT+TGG + Chr4:21879658-21879677 MsG0480019542.01.T01:intron 25.0%
!! TGTATAGATATTTCTGATCT+CGG + Chr4:21881151-21881170 MsG0480019542.01.T01:intron 25.0%
!!! ATTTTTTCTCTCTTTCTTTG+TGG + Chr4:21881682-21881701 MsG0480019542.01.T01:intron 25.0%
!!! CACAATCGATATGTTTTTTA+TGG + Chr4:21880045-21880064 MsG0480019542.01.T01:intron 25.0%
!!! TGTATATTTTAAGGTAAGAG+AGG + Chr4:21879096-21879115 MsG0480019542.01.T01:intron 25.0%
!!! TTGCACTGATTTAACAAAAA+TGG - Chr4:21883543-21883562 None:intergenic 25.0%
!!! TTGGAATTTTGATACATTGA+AGG + Chr4:21879935-21879954 MsG0480019542.01.T01:intron 25.0%
AAAACAAAGTTATCACTCAC+TGG - Chr4:21880593-21880612 None:intergenic 30.0%
AAAACGAAACTAAGTTGTTG+GGG - Chr4:21882695-21882714 None:intergenic 30.0%
AAGGGGTTATTTAAGCTTTA+GGG + Chr4:21879875-21879894 MsG0480019542.01.T01:intron 30.0%
AATGAGGGCAAATAAAATAG+AGG - Chr4:21881431-21881450 None:intergenic 30.0%
AATTCTGTACAGATGTTCAT+AGG + Chr4:21881510-21881529 MsG0480019542.01.T01:intron 30.0%
AGAGAAGATTAAAGAGAATC+AGG + Chr4:21879518-21879537 MsG0480019542.01.T01:CDS 30.0%
AGTTCTTCAAAGTTTACATC+TGG - Chr4:21882402-21882421 None:intergenic 30.0%
ATACCATTTCATCATGTTTG+GGG + Chr4:21880221-21880240 MsG0480019542.01.T01:intron 30.0%
ATAGATGAAATCGATGCAAT+TGG + Chr4:21881600-21881619 MsG0480019542.01.T01:CDS 30.0%
ATGAGGGCAAATAAAATAGA+GGG - Chr4:21881430-21881449 None:intergenic 30.0%
ATTGTATTAGAAAACGATGG+AGG - Chr4:21881213-21881232 None:intergenic 30.0%
CCCTTATTAATTGTAGTTAG+TGG + Chr4:21883106-21883125 MsG0480019542.01.T01:intron 30.0%
CTTATATTACCTGTTGATGT+GGG + Chr4:21883589-21883608 MsG0480019542.01.T01:three_prime_UTR 30.0%
CTTGAATCTAACAACTTGAA+TGG + Chr4:21882068-21882087 MsG0480019542.01.T01:intron 30.0%
GAAAACGAAACTAAGTTGTT+GGG - Chr4:21882696-21882715 None:intergenic 30.0%
GAAGTTGGAACCAAATTTAT+AGG + Chr4:21882111-21882130 MsG0480019542.01.T01:intron 30.0%
GAGTTATTGTGAGTATTAAG+GGG + Chr4:21879858-21879877 MsG0480019542.01.T01:intron 30.0%
GCTAGTGATTCTGTATAAAT+AGG - Chr4:21881019-21881038 None:intergenic 30.0%
GTTCTTCAAAGTTTACATCT+GGG - Chr4:21882401-21882420 None:intergenic 30.0%
TAAGGGGTTATTTAAGCTTT+AGG + Chr4:21879874-21879893 MsG0480019542.01.T01:intron 30.0%
TACACTTGGCAAAATATAAC+TGG - Chr4:21881062-21881081 None:intergenic 30.0%
TAGCTTAAGCATAATAGTTC+AGG - Chr4:21883709-21883728 None:intergenic 30.0%
TATATCTATTTGCTCGCATA+TGG + Chr4:21880016-21880035 MsG0480019542.01.T01:intron 30.0%
TCTTATATTACCTGTTGATG+TGG + Chr4:21883588-21883607 MsG0480019542.01.T01:three_prime_UTR 30.0%
TGAAAACGAAACTAAGTTGT+TGG - Chr4:21882697-21882716 None:intergenic 30.0%
TGGTAATTTACACACTTCAT+AGG - Chr4:21882607-21882626 None:intergenic 30.0%
TTGACACAAACAAGGAAAAA+TGG - Chr4:21881186-21881205 None:intergenic 30.0%
TTGGCAAAATATAACTGGTT+GGG - Chr4:21881057-21881076 None:intergenic 30.0%
! AGCTTGATAGTTATACGTTT+AGG + Chr4:21883400-21883419 MsG0480019542.01.T01:intron 30.0%
! ATTGTATATAGGGAGTTTTG+GGG + Chr4:21879660-21879679 MsG0480019542.01.T01:intron 30.0%
! TTTGATGATTGTTTCCATGT+TGG + Chr4:21882341-21882360 MsG0480019542.01.T01:intron 30.0%
! TTTGGTTGAATTTTTGATGC+AGG + Chr4:21879455-21879474 MsG0480019542.01.T01:intron 30.0%
!! ATTTTCAACACAAACTTGCT+TGG + Chr4:21881368-21881387 MsG0480019542.01.T01:intron 30.0%
!! CATTCAAGTTGTTAGATTCA+AGG - Chr4:21882070-21882089 None:intergenic 30.0%
!! GGTATTAAATTTTAGCATGC+AGG + Chr4:21881640-21881659 MsG0480019542.01.T01:intron 30.0%
!! TGAGTATGATTCTAGAGTTA+AGG + Chr4:21880453-21880472 MsG0480019542.01.T01:CDS 30.0%
!! TTGCTATTTCGATACATTGA+GGG - Chr4:21879719-21879738 None:intergenic 30.0%
!! TTTGCTATTTCGATACATTG+AGG - Chr4:21879720-21879739 None:intergenic 30.0%
!!! ATATTTTAAGGTAAGAGAGG+AGG + Chr4:21879099-21879118 MsG0480019542.01.T01:intron 30.0%
!!! TATTTTAAGGTAAGAGAGGA+GGG + Chr4:21879100-21879119 MsG0480019542.01.T01:intron 30.0%
AAAAAAAGCTGAGACATCTC+AGG + Chr4:21883757-21883776 MsG0480019542.01.T01:three_prime_UTR 35.0%
AAAATCCTTGTACAATCAGC+AGG - Chr4:21881338-21881357 None:intergenic 35.0%
AAACAATTACCCTATCTCGT+TGG + Chr4:21879558-21879577 MsG0480019542.01.T01:CDS 35.0%
AAACGAAACTAAGTTGTTGG+GGG - Chr4:21882694-21882713 None:intergenic 35.0%
AAATCCTTGTACAATCAGCA+GGG - Chr4:21881337-21881356 None:intergenic 35.0%
AACAAAGCAGATGAAGTATG+AGG - Chr4:21882292-21882311 None:intergenic 35.0%
AACAATGTTACCAACGAGAT+AGG - Chr4:21879571-21879590 None:intergenic 35.0%
AAGGTCAACAAAATTATGGG+AGG - Chr4:21882023-21882042 None:intergenic 35.0%
AATAATTATGGCGAGTGCAA+TGG + Chr4:21879262-21879281 MsG0480019542.01.T01:exon 35.0%
AATTCAGCAGTAGCAGATTA+GGG - Chr4:21879164-21879183 None:intergenic 35.0%
ACAATGTTACCAACGAGATA+GGG - Chr4:21879570-21879589 None:intergenic 35.0%
ACGATATTTCTTCCAGTTGT+TGG + Chr4:21880346-21880365 MsG0480019542.01.T01:CDS 35.0%
AGCACATGAGAAAATACACT+TGG - Chr4:21881076-21881095 None:intergenic 35.0%
AGTTAGTGGAGTAGTTAAGT+TGG + Chr4:21883120-21883139 MsG0480019542.01.T01:intron 35.0%
ATATAACTGGTTGGGGTAAA+TGG - Chr4:21881049-21881068 None:intergenic 35.0%
ATATTGACCTTGACTCACAA+AGG + Chr4:21880148-21880167 MsG0480019542.01.T01:CDS 35.0%
ATCCAAATAGTCGCAGATTT+CGG - Chr4:21879201-21879220 None:intergenic 35.0%
CTTCATCATAATCCAAGCAT+AGG + Chr4:21883288-21883307 MsG0480019542.01.T01:intron 35.0%
CTTGGCAAAATATAACTGGT+TGG - Chr4:21881058-21881077 None:intergenic 35.0%
GAACATCTGTACAGAATTTC+AGG - Chr4:21881508-21881527 None:intergenic 35.0%
GAACATTCATCTTCCTTGAA+TGG - Chr4:21882377-21882396 None:intergenic 35.0%
GACTATAATTTAGAGACGGA+GGG - Chr4:21883004-21883023 None:intergenic 35.0%
GAGGAATATTGACACAAACA+AGG - Chr4:21881194-21881213 None:intergenic 35.0%
GGCAAATAAAATAGAGGGAT+GGG - Chr4:21881425-21881444 None:intergenic 35.0%
TAAAGAGGAGAGAAGAGAAA+AGG - Chr4:21879392-21879411 None:intergenic 35.0%
TAGTTGGTCAACATACATCA+TGG + Chr4:21882759-21882778 MsG0480019542.01.T01:intron 35.0%
TGGCAAAATATAACTGGTTG+GGG - Chr4:21881056-21881075 None:intergenic 35.0%
TGGTATTTCAGATCCATTCA+AGG + Chr4:21882361-21882380 MsG0480019542.01.T01:intron 35.0%
TTGAATTTATGGTTGCGACA+AGG - Chr4:21880305-21880324 None:intergenic 35.0%
TTGACTAACAAGTGGACAAT+CGG + Chr4:21879904-21879923 MsG0480019542.01.T01:intron 35.0%
TTGAGATCATTACACATACC+TGG - Chr4:21880812-21880831 None:intergenic 35.0%
! ATGGATCTGAAATACCAACA+TGG - Chr4:21882358-21882377 None:intergenic 35.0%
! GTTTGCTTAGTTCCTGATTT+TGG + Chr4:21879437-21879456 MsG0480019542.01.T01:intron 35.0%
! TAAACTTTGAAGAACTCGCT+CGG + Chr4:21882406-21882425 MsG0480019542.01.T01:CDS 35.0%
!! ACTCTAGAATCATACTCAGA+AGG - Chr4:21880451-21880470 None:intergenic 35.0%
!! GATAGATGAATACTGGCTTT+GGG + Chr4:21881954-21881973 MsG0480019542.01.T01:intron 35.0%
!! GGTTTGTTTTCTGTCAGATT+TGG + Chr4:21882512-21882531 MsG0480019542.01.T01:CDS 35.0%
!! TGATAGATGAATACTGGCTT+TGG + Chr4:21881953-21881972 MsG0480019542.01.T01:intron 35.0%
!! TTGGTACAAAGCGTTTTGAT+AGG + Chr4:21881619-21881638 MsG0480019542.01.T01:CDS 35.0%
!! TTTTGGGGAAATAGTCACTT+TGG + Chr4:21879675-21879694 MsG0480019542.01.T01:intron 35.0%
!!! ATTTTAAGGTAAGAGAGGAG+GGG + Chr4:21879101-21879120 MsG0480019542.01.T01:intron 35.0%
!!! GGACTATTTTGACTAACAAG+TGG + Chr4:21879896-21879915 MsG0480019542.01.T01:intron 35.0%
AACAAACCTCAGTTGCATCA+CGG - Chr4:21882500-21882519 None:intergenic 40.0%
AACCACGAGGACTTTAATGA+AGG + Chr4:21883650-21883669 MsG0480019542.01.T01:three_prime_UTR 40.0%
AAGGAAATTCCCACATCAAC+AGG - Chr4:21883601-21883620 None:intergenic 40.0%
AATCCTTGTACAATCAGCAG+GGG - Chr4:21881336-21881355 None:intergenic 40.0%
AATGCATGGTGACTTCTCTT+TGG - Chr4:21881574-21881593 None:intergenic 40.0%
ACAAGGGGTAATAGTCACTT+TGG - Chr4:21879993-21880012 None:intergenic 40.0%
ACAGAGGACTACAATGACAT+TGG + Chr4:21880499-21880518 MsG0480019542.01.T01:CDS 40.0%
ACCTGCTAACTTGAGAAAAG+TGG - Chr4:21880778-21880797 None:intergenic 40.0%
AGAAGAGAAAAGGAACCTTG+AGG - Chr4:21879382-21879401 None:intergenic 40.0%
AGGGACTGGGAAAACTTTAA+TGG + Chr4:21880725-21880744 MsG0480019542.01.T01:intron 40.0%
AGGTTTGTGCACGGTTATTA+AGG + Chr4:21883029-21883048 MsG0480019542.01.T01:three_prime_UTR 40.0%
ATGTCATTGTAGTCCTCTGT+TGG - Chr4:21880499-21880518 None:intergenic 40.0%
CAAGAGAAAGCCTAATTTGG+GGG + Chr4:21883781-21883800 MsG0480019542.01.T01:three_prime_UTR 40.0%
CATTTGCGCTTGTAAATTGC+AGG + Chr4:21882138-21882157 MsG0480019542.01.T01:intron 40.0%
CCAAGAGAAAGCCTAATTTG+GGG + Chr4:21883780-21883799 MsG0480019542.01.T01:three_prime_UTR 40.0%
CGACTATAATTTAGAGACGG+AGG - Chr4:21883005-21883024 None:intergenic 40.0%
CGATGGCTTCAACTAATTCT+TGG - Chr4:21880627-21880646 None:intergenic 40.0%
CGGTGCTCATATTAGCTAAT+TGG - Chr4:21879313-21879332 None:intergenic 40.0%
CTAAAACCTGGTGATCTTGT+TGG + Chr4:21880388-21880407 MsG0480019542.01.T01:CDS 40.0%
CTCTCTTTCTTTGTGGTGAA+GGG + Chr4:21881689-21881708 MsG0480019542.01.T01:intron 40.0%
GAATTCAGCAGTAGCAGATT+AGG - Chr4:21879165-21879184 None:intergenic 40.0%
GACAATTATTGTGAGACGGA+GGG + Chr4:21883248-21883267 MsG0480019542.01.T01:intron 40.0%
GCCAAGAGAAAGCCTAATTT+GGG + Chr4:21883779-21883798 MsG0480019542.01.T01:three_prime_UTR 40.0%
GCTAAAAACATCTACTCGAC+AGG + Chr4:21880188-21880207 MsG0480019542.01.T01:CDS 40.0%
GGGCAAATAAAATAGAGGGA+TGG - Chr4:21881426-21881445 None:intergenic 40.0%
GTACAGATGTTCATAGGAGA+TGG + Chr4:21881516-21881535 MsG0480019542.01.T01:intron 40.0%
TACCTTCATTAAAGTCCTCG+TGG - Chr4:21883655-21883674 None:intergenic 40.0%
TAGCTCTTGCTTCTTCAGTT+GGG - Chr4:21882249-21882268 None:intergenic 40.0%
TAGTCGCAGATTTCGGAATT+AGG - Chr4:21879194-21879213 None:intergenic 40.0%
TCTCTCTTTCTTTGTGGTGA+AGG + Chr4:21881688-21881707 MsG0480019542.01.T01:intron 40.0%
TCTCTTTCTTTGTGGTGAAG+GGG + Chr4:21881690-21881709 MsG0480019542.01.T01:intron 40.0%
TGACAATTATTGTGAGACGG+AGG + Chr4:21883247-21883266 MsG0480019542.01.T01:intron 40.0%
TGACTAACAAGTGGACAATC+GGG + Chr4:21879905-21879924 MsG0480019542.01.T01:intron 40.0%
TTCCGAAATCTGCGACTATT+TGG + Chr4:21879196-21879215 MsG0480019542.01.T01:five_prime_UTR 40.0%
TTTACACCAACAAGATCACC+AGG - Chr4:21880397-21880416 None:intergenic 40.0%
! AGAAGCTCTGACGATATCAT+CGG - Chr4:21879333-21879352 None:intergenic 40.0%
! AGTCGTTTAAGGTTTGTGCA+CGG + Chr4:21883020-21883039 MsG0480019542.01.T01:three_prime_UTR 40.0%
! ATTAAAGTTTTCCCAGTCCC+TGG - Chr4:21880726-21880745 None:intergenic 40.0%
! GACTACTTGCTACACATTCA+GGG + Chr4:21879966-21879985 MsG0480019542.01.T01:intron 40.0%
! GTTCCTGAATGCTGTGTTTT+GGG + Chr4:21881997-21882016 MsG0480019542.01.T01:intron 40.0%
! TGACTACTTGCTACACATTC+AGG + Chr4:21879965-21879984 MsG0480019542.01.T01:intron 40.0%
! TGGCTTTTCATCAACTTCCA+TGG - Chr4:21880479-21880498 None:intergenic 40.0%
! TGTTCCTGAATGCTGTGTTT+TGG + Chr4:21881996-21882015 MsG0480019542.01.T01:intron 40.0%
!! ACTCTACTAGAGAGTACCAA+AGG + Chr4:21880961-21880980 MsG0480019542.01.T01:intron 40.0%
!! AGTTGATGAAAAGCCAACAG+AGG + Chr4:21880483-21880502 MsG0480019542.01.T01:CDS 40.0%
!! CTCTACTAGAGAGTACCAAA+GGG + Chr4:21880962-21880981 MsG0480019542.01.T01:intron 40.0%
!! GGCTTTGGGTTAAGCATAAT+AGG + Chr4:21881968-21881987 MsG0480019542.01.T01:intron 40.0%
!! TCTCGTTGGTAACATTGTTG+AGG + Chr4:21879572-21879591 MsG0480019542.01.T01:CDS 40.0%
!! TGATTCTAGAGTTAAGGCCA+TGG + Chr4:21880459-21880478 MsG0480019542.01.T01:CDS 40.0%
!!! AGCTAGTCTTTTCTTCAGCA+GGG + Chr4:21881290-21881309 MsG0480019542.01.T01:intron 40.0%
!!! CATAGGTTTTAGCTGCTCAT+GGG + Chr4:21883305-21883324 MsG0480019542.01.T01:intron 40.0%
!!! TAGCTAGTCTTTTCTTCAGC+AGG + Chr4:21881289-21881308 MsG0480019542.01.T01:intron 40.0%
AAAAGGTTGGACATTCGTCC+TGG + Chr4:21882660-21882679 MsG0480019542.01.T01:intron 45.0%
AGAGGGATGGGATAGCAAAA+CGG - Chr4:21881413-21881432 None:intergenic 45.0%
AGCAAGAGCTAGAATTCTGC+AGG + Chr4:21882258-21882277 MsG0480019542.01.T01:CDS 45.0%
AGTTAGGAATTCGTCCTCCA+AGG + Chr4:21880680-21880699 MsG0480019542.01.T01:intron 45.0%
CAGTCTCTGATTGTGCACTT+TGG + Chr4:21879741-21879760 MsG0480019542.01.T01:intron 45.0%
CCACCCCAAACATGATGAAA+TGG - Chr4:21880227-21880246 None:intergenic 45.0%
CCATTTCATCATGTTTGGGG+TGG + Chr4:21880224-21880243 MsG0480019542.01.T01:intron 45.0%
CCCCAAATTAGGCTTTCTCT+TGG - Chr4:21883783-21883802 None:intergenic 45.0%
CGCAGATTTCGGAATTAGGT+TGG - Chr4:21879190-21879209 None:intergenic 45.0%
CGGTCCACAGATGATTTCAA+CGG + Chr4:21882426-21882445 MsG0480019542.01.T01:CDS 45.0%
CTGATTGCAGTGAAGTGAGT+GGG + Chr4:21881796-21881815 MsG0480019542.01.T01:intron 45.0%
CTGGGAAAACTTTAATGGCC+CGG + Chr4:21880730-21880749 MsG0480019542.01.T01:intron 45.0%
GACCTTGACTCACAAAGGAA+GGG + Chr4:21880153-21880172 MsG0480019542.01.T01:CDS 45.0%
GACTAACAAGTGGACAATCG+GGG + Chr4:21879906-21879925 MsG0480019542.01.T01:intron 45.0%
GAGCAGCTAAAACCTATGCT+TGG - Chr4:21883303-21883322 None:intergenic 45.0%
GAGCTAGAATTCTGCAGGTT+TGG + Chr4:21882263-21882282 MsG0480019542.01.T01:intron 45.0%
GAGGACGAATTCCTAACTTC+TGG - Chr4:21880678-21880697 None:intergenic 45.0%
GAGGACTACAATGACATTGG+TGG + Chr4:21880502-21880521 MsG0480019542.01.T01:CDS 45.0%
GAGTTGCTCAATCAGCTTGA+TGG + Chr4:21881846-21881865 MsG0480019542.01.T01:CDS 45.0%
GCAATTTCAGTGGGCCAATT+TGG + Chr4:21883355-21883374 MsG0480019542.01.T01:intron 45.0%
GGAGATGAATCCAGAAGATG+AGG + Chr4:21880107-21880126 MsG0480019542.01.T01:CDS 45.0%
GGCCAAGAGAAAGCCTAATT+TGG + Chr4:21883778-21883797 MsG0480019542.01.T01:three_prime_UTR 45.0%
GGTGAGGAAACTCAATCTTG+CGG - Chr4:21882228-21882247 None:intergenic 45.0%
GGTTGGGGTAAATGGACATT+TGG - Chr4:21881041-21881060 None:intergenic 45.0%
GTGACTTCTCTTTGGCAAGT+TGG - Chr4:21881566-21881585 None:intergenic 45.0%
GTTAGGAATTCGTCCTCCAA+GGG + Chr4:21880681-21880700 MsG0480019542.01.T01:intron 45.0%
GTTTGAGCGATTAATCTCCC+CGG + Chr4:21883330-21883349 MsG0480019542.01.T01:intron 45.0%
TCAAATGTAGGTGAACCACG+AGG + Chr4:21883637-21883656 MsG0480019542.01.T01:three_prime_UTR 45.0%
TGACCTTGACTCACAAAGGA+AGG + Chr4:21880152-21880171 MsG0480019542.01.T01:CDS 45.0%
TGAGGGACTATTGTGACTCT+CGG - Chr4:21879702-21879721 None:intergenic 45.0%
TGATTGCAGTGAAGTGAGTG+GGG + Chr4:21881797-21881816 MsG0480019542.01.T01:intron 45.0%
TGCACCGTTGAAATCATCTG+TGG - Chr4:21882433-21882452 None:intergenic 45.0%
TGCTCTTATATGGTCCACCA+GGG + Chr4:21880706-21880725 MsG0480019542.01.T01:intron 45.0%
TGGGAAAACTTTAATGGCCC+GGG + Chr4:21880731-21880750 MsG0480019542.01.T01:intron 45.0%
TTCCCTTCCTTTGTGAGTCA+AGG - Chr4:21880158-21880177 None:intergenic 45.0%
TTGTTGGGGGTAAATTTGCC+AGG - Chr4:21882681-21882700 None:intergenic 45.0%
! CTAGCTCTTGCTTCTTCAGT+TGG - Chr4:21882250-21882269 None:intergenic 45.0%
! CTTCTCTTTGGCAAGTTGGA+AGG - Chr4:21881562-21881581 None:intergenic 45.0%
! GGCTTGCTTTCTTCTTTGCT+TGG - Chr4:21883688-21883707 None:intergenic 45.0%
! TGGACAATCGGGGACTATTT+TGG + Chr4:21879916-21879935 MsG0480019542.01.T01:intron 45.0%
!! AAAGAGCGCTTCCAGAAGTT+AGG + Chr4:21880664-21880683 MsG0480019542.01.T01:intron 45.0%
!! ACCATATAAGAGCACTCCCT+TGG - Chr4:21880700-21880719 None:intergenic 45.0%
!! ATATAAGAGCACTCCCTTGG+AGG - Chr4:21880697-21880716 None:intergenic 45.0%
!! CATTGGTGGATTAGAGAAGC+AGG + Chr4:21880516-21880535 MsG0480019542.01.T01:CDS 45.0%
!! TCCAAGGGAGTGCTCTTATA+TGG + Chr4:21880696-21880715 MsG0480019542.01.T01:intron 45.0%
!!! CACCAGGTTTTAGCTTGTCA+GGG - Chr4:21880381-21880400 None:intergenic 45.0%
!!! GCATAGGTTTTAGCTGCTCA+TGG + Chr4:21883304-21883323 MsG0480019542.01.T01:intron 45.0%
!!! GCCACTTTTCTCAAGTTAGC+AGG + Chr4:21880774-21880793 MsG0480019542.01.T01:intron 45.0%
!!! GCTAGTCTTTTCTTCAGCAG+GGG + Chr4:21881291-21881310 MsG0480019542.01.T01:intron 45.0%
!!! TCACCAGGTTTTAGCTTGTC+AGG - Chr4:21880382-21880401 None:intergenic 45.0%
!! AATATAAATTCAATTTATAA+AGG - Chr4:21881454-21881473 None:intergenic 5.0%
AAGCGCTCTTTGTGGGTCAT+TGG - Chr4:21880655-21880674 None:intergenic 50.0%
AAGTCTCTCCTCTCTCCCTT+TGG - Chr4:21880980-21880999 None:intergenic 50.0%
ACACATACCTGGACAAGCTG+AGG - Chr4:21880801-21880820 None:intergenic 50.0%
ACTGAAAGCCGTCTGTGTTG+AGG + Chr4:21882455-21882474 MsG0480019542.01.T01:CDS 50.0%
AGAGTTGCAGAGGACGAATC+TGG + Chr4:21879479-21879498 MsG0480019542.01.T01:CDS 50.0%
AGGCCCAAAACACAGCATTC+AGG - Chr4:21882003-21882022 None:intergenic 50.0%
CAACGAGATTCGCATCCTCA+AGG + Chr4:21879364-21879383 MsG0480019542.01.T01:CDS 50.0%
CAATCGACCAGAACGCATGA+GGG - Chr4:21882203-21882222 None:intergenic 50.0%
CTTGCTTCTTCAGTTGGGTG+AGG - Chr4:21882244-21882263 None:intergenic 50.0%
GAAGATGAGGCTGAGGAAGA+TGG + Chr4:21880120-21880139 MsG0480019542.01.T01:CDS 50.0%
GAATCCAGAAGATGAGGCTG+AGG + Chr4:21880113-21880132 MsG0480019542.01.T01:CDS 50.0%
GACCCTGACAAGCTAAAACC+TGG + Chr4:21880376-21880395 MsG0480019542.01.T01:CDS 50.0%
GAGGGATGGGATAGCAAAAC+GGG - Chr4:21881412-21881431 None:intergenic 50.0%
GCGAGTGCAATGGTAGAAGA+TGG + Chr4:21879272-21879291 MsG0480019542.01.T01:CDS 50.0%
GCTGATTGCAGTGAAGTGAG+TGG + Chr4:21881795-21881814 MsG0480019542.01.T01:intron 50.0%
GGGTCAACAAGTCCAACAAC+TGG - Chr4:21880361-21880380 None:intergenic 50.0%
GTGCTCTTATATGGTCCACC+AGG + Chr4:21880705-21880724 MsG0480019542.01.T01:intron 50.0%
GTGGGTCATTGGCAAAACGA+TGG - Chr4:21880644-21880663 None:intergenic 50.0%
TATATGGTCCACCAGGGACT+GGG + Chr4:21880712-21880731 MsG0480019542.01.T01:intron 50.0%
TCTTCCTCAGCCTCATCTTC+TGG - Chr4:21880120-21880139 None:intergenic 50.0%
TGATGCAGGAAGAGTTGCAG+AGG + Chr4:21879469-21879488 MsG0480019542.01.T01:intron 50.0%
TTATATGGTCCACCAGGGAC+TGG + Chr4:21880711-21880730 MsG0480019542.01.T01:intron 50.0%
! AAAGTTTTCCCAGTCCCTGG+TGG - Chr4:21880723-21880742 None:intergenic 50.0%
! TGTCCCCTGCTGATTGTACA+AGG + Chr4:21881330-21881349 MsG0480019542.01.T01:intron 50.0%
!! ACTTCTGGAAGCGCTCTTTG+TGG - Chr4:21880663-21880682 None:intergenic 50.0%
!! AGAGAGTACCAAAGGGAGAG+AGG + Chr4:21880969-21880988 MsG0480019542.01.T01:intron 50.0%
!! CTTCTGGAAGCGCTCTTTGT+GGG - Chr4:21880662-21880681 None:intergenic 50.0%
!!! ATGGTTTTAGCAGCGACGAC+CGG + Chr4:21881865-21881884 MsG0480019542.01.T01:CDS 50.0%
AAAGCCGTCTGTGTTGAGGC+TGG + Chr4:21882459-21882478 MsG0480019542.01.T01:CDS 55.0%
CAGTGAAGTGAGTGGGGACA+GGG + Chr4:21881803-21881822 MsG0480019542.01.T01:intron 55.0%
CATGCCAGCCTCAACACAGA+CGG - Chr4:21882466-21882485 None:intergenic 55.0%
CCAATCGACCAGAACGCATG+AGG - Chr4:21882204-21882223 None:intergenic 55.0%
CCTCATGCGTTCTGGTCGAT+TGG + Chr4:21882201-21882220 MsG0480019542.01.T01:CDS 55.0%
GGCATTTGTCTGTGCTGCAC+AGG - Chr4:21880757-21880776 None:intergenic 55.0%
TAGCAGCGACGACCGGATTA+AGG + Chr4:21881872-21881891 MsG0480019542.01.T01:CDS 55.0%
TCCCCGGTGGCAATTTCAGT+GGG + Chr4:21883346-21883365 MsG0480019542.01.T01:intron 55.0%
TGAGCGATTAATCTCCCCGG+TGG + Chr4:21883333-21883352 MsG0480019542.01.T01:intron 55.0%
TGGCCCACTGAAATTGCCAC+CGG - Chr4:21883352-21883371 None:intergenic 55.0%
! GTGAGACGGAGGGAGTACAA+CGG + Chr4:21883258-21883277 MsG0480019542.01.T01:intron 55.0%
AGCAGGTCCTCAGCTTGTCC+AGG + Chr4:21880791-21880810 MsG0480019542.01.T01:intron 60.0%
CTCCCCGGTGGCAATTTCAG+TGG + Chr4:21883345-21883364 MsG0480019542.01.T01:intron 60.0%
CTGTGTTGAGGCTGGCATGC+TGG + Chr4:21882467-21882486 MsG0480019542.01.T01:CDS 60.0%
GATCCTGCCCTCATGCGTTC+TGG + Chr4:21882193-21882212 MsG0480019542.01.T01:CDS 60.0%
GCAGTGAAGTGAGTGGGGAC+AGG + Chr4:21881802-21881821 MsG0480019542.01.T01:intron 60.0%
GCCCACTGAAATTGCCACCG+GGG - Chr4:21883350-21883369 None:intergenic 60.0%
GGCCCACTGAAATTGCCACC+GGG - Chr4:21883351-21883370 None:intergenic 60.0%
TCTGCGCCGTGATGCAACTG+AGG + Chr4:21882491-21882510 MsG0480019542.01.T01:CDS 60.0%
TGAAGTGAGTGGGGACAGGG+AGG + Chr4:21881806-21881825 MsG0480019542.01.T01:CDS 60.0%
TTGTCTGTGCTGCACAGGCC+CGG - Chr4:21880752-21880771 None:intergenic 60.0%
CGACCAGAACGCATGAGGGC+AGG - Chr4:21882199-21882218 None:intergenic 65.0%
TGTCTGTGCTGCACAGGCCC+GGG - Chr4:21880751-21880770 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr4 gene 21878992 21883811 21878992 ID=MsG0480019542.01;Name=MsG0480019542.01
Chr4 mRNA 21878992 21883811 21878992 ID=MsG0480019542.01.T01;Parent=MsG0480019542.01;Name=MsG0480019542.01.T01;_AED=0.46;_eAED=0.46;_QI=240|0.90|1|1|0.63|0.5|12|841|348
Chr4 exon 21878992 21879108 21878992 ID=MsG0480019542.01.T01:exon:10451;Parent=MsG0480019542.01.T01
Chr4 exon 21879146 21879385 21879146 ID=MsG0480019542.01.T01:exon:10452;Parent=MsG0480019542.01.T01
Chr4 exon 21879477 21879593 21879477 ID=MsG0480019542.01.T01:exon:10453;Parent=MsG0480019542.01.T01
Chr4 exon 21880102 21880209 21880102 ID=MsG0480019542.01.T01:exon:10454;Parent=MsG0480019542.01.T01
Chr4 exon 21880346 21880537 21880346 ID=MsG0480019542.01.T01:exon:10455;Parent=MsG0480019542.01.T01
Chr4 exon 21881522 21881640 21881522 ID=MsG0480019542.01.T01:exon:10456;Parent=MsG0480019542.01.T01
Chr4 exon 21881806 21881893 21881806 ID=MsG0480019542.01.T01:exon:10457;Parent=MsG0480019542.01.T01
Chr4 exon 21882160 21882279 21882160 ID=MsG0480019542.01.T01:exon:10458;Parent=MsG0480019542.01.T01
Chr4 exon 21882372 21882642 21882372 ID=MsG0480019542.01.T01:exon:10459;Parent=MsG0480019542.01.T01
Chr4 exon 21882665 21882761 21882665 ID=MsG0480019542.01.T01:exon:10460;Parent=MsG0480019542.01.T01
Chr4 exon 21882822 21883078 21882822 ID=MsG0480019542.01.T01:exon:10461;Parent=MsG0480019542.01.T01
Chr4 exon 21883410 21883811 21883410 ID=MsG0480019542.01.T01:exon:10462;Parent=MsG0480019542.01.T01
Chr4 five_prime_UTR 21878992 21879108 21878992 ID=MsG0480019542.01.T01:five_prime_utr;Parent=MsG0480019542.01.T01
Chr4 five_prime_UTR 21879146 21879268 21879146 ID=MsG0480019542.01.T01:five_prime_utr;Parent=MsG0480019542.01.T01
Chr4 CDS 21879269 21879385 21879269 ID=MsG0480019542.01.T01:cds;Parent=MsG0480019542.01.T01
Chr4 CDS 21879477 21879593 21879477 ID=MsG0480019542.01.T01:cds;Parent=MsG0480019542.01.T01
Chr4 CDS 21880102 21880209 21880102 ID=MsG0480019542.01.T01:cds;Parent=MsG0480019542.01.T01
Chr4 CDS 21880346 21880537 21880346 ID=MsG0480019542.01.T01:cds;Parent=MsG0480019542.01.T01
Chr4 CDS 21881522 21881640 21881522 ID=MsG0480019542.01.T01:cds;Parent=MsG0480019542.01.T01
Chr4 CDS 21881806 21881893 21881806 ID=MsG0480019542.01.T01:cds;Parent=MsG0480019542.01.T01
Chr4 CDS 21882160 21882279 21882160 ID=MsG0480019542.01.T01:cds;Parent=MsG0480019542.01.T01
Chr4 CDS 21882372 21882557 21882372 ID=MsG0480019542.01.T01:cds;Parent=MsG0480019542.01.T01
Chr4 three_prime_UTR 21882558 21882642 21882558 ID=MsG0480019542.01.T01:three_prime_utr;Parent=MsG0480019542.01.T01
Chr4 three_prime_UTR 21882665 21882761 21882665 ID=MsG0480019542.01.T01:three_prime_utr;Parent=MsG0480019542.01.T01
Chr4 three_prime_UTR 21882822 21883078 21882822 ID=MsG0480019542.01.T01:three_prime_utr;Parent=MsG0480019542.01.T01
Chr4 three_prime_UTR 21883410 21883811 21883410 ID=MsG0480019542.01.T01:three_prime_utr;Parent=MsG0480019542.01.T01
Gene Sequence

>MsG0480019542.01.T01

ATGGCGAGTGCAATGGTAGAAGATGGTAACTTCGAAGATGACCAATTAGCTAATATGAGCACCGATGATATCGTCAGAGCTTCTCGTCTTCTCGACAACGAGATTCGCATCCTCAAGGAAGAGTTGCAGAGGACGAATCTGGAACTTGAATCGTATAAAGAGAAGATTAAAGAGAATCAGGAGAAAATTAAGCTTAATAAACAATTACCCTATCTCGTTGGTAACATTGTTGAGATATTGGAGATGAATCCAGAAGATGAGGCTGAGGAAGATGGTGCTAATATTGACCTTGACTCACAAAGGAAGGGAAAATGTGTTGTGCTAAAAACATCTACTCGACAGACGATATTTCTTCCAGTTGTTGGACTTGTTGACCCTGACAAGCTAAAACCTGGTGATCTTGTTGGTGTAAACAAAGATAGTTACTTAATCTTGGATACTCTGCCTTCTGAGTATGATTCTAGAGTTAAGGCCATGGAAGTTGATGAAAAGCCAACAGAGGACTACAATGACATTGGTGGATTAGAGAAGCAGATGTTCATAGGAGATGGAGCAAAACTTGTTCGTGACGCCTTCCAACTTGCCAAAGAGAAGTCACCATGCATTATATTTATAGATGAAATCGATGCAATTGGTACAAAGCGTTTTGATAGTGAAGTGAGTGGGGACAGGGAGGTTCAAAGAACAATGTTAGAGTTGCTCAATCAGCTTGATGGTTTTAGCAGCGACGACCGGATTAAGGTGATAGCAGCAACAAATCGTGCAGATATTCTTGATCCTGCCCTCATGCGTTCTGGTCGATTGGACCGCAAGATTGAGTTTCCTCACCCAACTGAAGAAGCAAGAGCTAGAATTCTGCAGATCCATTCAAGGAAGATGAATGTTCACCCAGATGTAAACTTTGAAGAACTCGCTCGGTCCACAGATGATTTCAACGGTGCACAACTGAAAGCCGTCTGTGTTGAGGCTGGCATGCTGGCTCTGCGCCGTGATGCAACTGAGGTTTGTTTTCTGTCAGATTTGGAACAACTAATTTATACACCCTGA
Protein sequence

>MsG0480019542.01.T01

MASAMVEDGNFEDDQLANMSTDDIVRASRLLDNEIRILKEELQRTNLELESYKEKIKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVCFLSDLEQLIYTP*