AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280009478.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280009478.01.T03 MTR_1g088650 64.844 128 45 0 20 147 62 189 2.31e-52 167
MsG0280009478.01.T03 MTR_5g085210 51.064 141 53 1 19 159 94 218 4.78e-44 147
MsG0280009478.01.T03 MTR_5g075610 63.265 98 34 1 50 147 1 96 1.34e-39 131
MsG0280009478.01.T03 MTR_8g022750 48.571 140 53 2 3 142 166 286 3.58e-39 136
MsG0280009478.01.T03 MTR_2g027020 44.311 167 89 1 23 189 7 169 1.40e-37 129
MsG0280009478.01.T03 MTR_2g059470 67.470 83 27 0 45 127 1 83 4.62e-36 122
MsG0280009478.01.T03 MTR_1g034430 50.000 108 54 0 23 130 74 181 2.21e-34 120
MsG0280009478.01.T03 MTR_7g013520 39.655 174 74 2 7 180 39 181 1.38e-33 118
MsG0280009478.01.T03 MTR_6g089560 43.860 114 64 0 17 130 89 202 1.52e-29 109
MsG0280009478.01.T03 MTR_6g016265 46.296 108 58 0 23 130 18 125 6.87e-29 104
MsG0280009478.01.T03 MTR_1g057740 37.363 182 69 2 2 182 4 141 7.39e-29 105
MsG0280009478.01.T03 MTR_4g029360 39.706 136 82 0 9 144 92 227 4.54e-28 105
MsG0280009478.01.T03 MTR_8g031080 38.953 172 79 2 8 179 253 398 8.55e-28 108
MsG0280009478.01.T03 MTR_4g008270 55.556 81 36 0 47 127 13 93 1.11e-27 100
MsG0280009478.01.T03 MTR_8g031800 48.571 105 53 1 22 126 9 112 1.23e-27 101
MsG0280009478.01.T03 MTR_3g116210 44.144 111 62 0 18 128 71 181 2.21e-26 100
MsG0280009478.01.T03 MTR_5g049680 50.000 98 48 1 23 119 10 107 2.70e-26 97.8
MsG0280009478.01.T03 MTR_8g098925 40.476 126 61 1 16 141 51 162 3.34e-26 99.0
MsG0280009478.01.T03 MTR_5g083200 37.008 127 80 0 14 140 68 194 9.42e-26 99.0
MsG0280009478.01.T03 MTR_0002s1220 37.008 127 80 0 14 140 68 194 9.42e-26 99.0
MsG0280009478.01.T03 MTR_7g063280 39.655 116 67 1 31 146 62 174 1.40e-25 97.8
MsG0280009478.01.T03 MTR_5g037920 39.597 149 87 3 21 167 75 222 1.81e-25 99.0
MsG0280009478.01.T03 MTR_2g047100 45.763 118 43 3 29 143 3 102 4.94e-25 94.4
MsG0280009478.01.T03 MTR_3g111390 35.433 127 82 0 14 140 68 194 1.58e-24 95.9
MsG0280009478.01.T03 MTR_1g070820 35.433 127 82 0 14 140 68 194 1.58e-24 95.9
MsG0280009478.01.T03 MTR_8g099580 46.667 105 56 0 23 127 185 289 2.82e-24 97.4
MsG0280009478.01.T03 MTR_1g069475 43.396 106 60 0 23 128 143 248 5.12e-24 95.5
MsG0280009478.01.T03 MTR_3g010950 34.375 160 75 2 21 180 3 132 5.13e-24 92.8
MsG0280009478.01.T03 MTR_1g074240 61.538 65 25 0 45 109 1 65 5.54e-24 90.9
MsG0280009478.01.T03 MTR_8g036780 45.361 97 53 0 13 109 3 99 8.62e-24 91.3
MsG0280009478.01.T03 MTR_3g017480 44.167 120 66 1 62 181 2 120 1.38e-23 91.3
MsG0280009478.01.T03 MTR_1g050488 48.837 86 44 0 24 109 78 163 2.22e-23 92.0
MsG0280009478.01.T03 MTR_6g034915 32.796 186 78 2 26 181 7 175 4.56e-23 91.3
MsG0280009478.01.T03 MTR_6g453270 45.545 101 55 0 22 122 278 378 5.71e-23 95.1
MsG0280009478.01.T03 MTR_1g045340 37.931 116 72 0 25 140 65 180 6.66e-23 91.3
MsG0280009478.01.T03 MTR_1g074090 45.652 92 50 0 21 112 58 149 7.26e-23 90.1
MsG0280009478.01.T03 MTR_4g046027 49.485 97 36 1 3 86 73 169 1.16e-22 90.1
MsG0280009478.01.T03 MTR_5g036320 49.412 85 43 0 23 107 58 142 1.49e-22 89.4
MsG0280009478.01.T03 MTR_5g094290 71.429 63 18 0 123 185 32 94 1.93e-22 92.0
MsG0280009478.01.T03 MTR_1g081930 38.136 118 73 0 13 130 7 124 3.52e-22 87.8
MsG0280009478.01.T03 MTR_1g017840 44.444 99 55 0 29 127 63 161 9.06e-22 87.4
MsG0280009478.01.T03 MTR_0015s0120 48.864 88 45 0 22 109 271 358 1.05e-21 91.3
MsG0280009478.01.T03 MTR_8g028785 36.806 144 67 1 8 151 246 365 2.26e-21 90.5
MsG0280009478.01.T03 MTR_6g046670 46.154 91 44 1 7 97 91 176 2.33e-21 87.4
MsG0280009478.01.T03 MTR_1g018300 39.024 123 69 1 14 136 33 149 9.31e-21 87.0
MsG0280009478.01.T03 MTR_1g099430 37.903 124 36 1 22 145 103 185 1.30e-20 85.9
MsG0280009478.01.T03 MTR_7g082130 38.017 121 51 2 38 158 39 135 1.20e-19 81.3
MsG0280009478.01.T03 MTR_8g079540 38.053 113 68 1 5 117 11 121 1.51e-19 80.5
MsG0280009478.01.T03 MTR_7g006380 34.043 141 66 1 21 161 43 156 1.96e-19 82.0
MsG0280009478.01.T03 MTR_1g052605 78.261 46 10 0 137 182 99 144 2.12e-19 80.9
MsG0280009478.01.T03 MTR_5g034450 48.750 80 41 0 29 108 34 113 2.74e-19 79.7
MsG0280009478.01.T03 MTR_2g017550 48.000 75 39 0 22 96 86 160 4.09e-19 80.9
MsG0280009478.01.T03 MTR_2g055490 35.606 132 52 1 49 180 12 110 4.98e-19 79.0
MsG0280009478.01.T03 MTR_7g078610 53.731 67 31 0 20 86 27 93 1.23e-18 77.4
MsG0280009478.01.T03 MTR_1g103580 31.013 158 57 1 20 177 136 241 1.67e-18 81.3
MsG0280009478.01.T03 MTR_0093s0070 45.000 80 44 0 47 126 126 205 9.26e-18 78.2
MsG0280009478.01.T03 MTR_8g038340 41.975 81 47 0 21 101 166 246 3.21e-17 77.4
MsG0280009478.01.T03 MTR_6g033225 42.683 82 47 0 28 109 54 135 3.42e-17 75.1
MsG0280009478.01.T03 MTR_5g068115 47.692 65 34 0 13 77 3 67 8.48e-17 72.0
MsG0280009478.01.T03 MTR_6g045427 35.043 117 48 1 20 136 149 237 1.78e-16 75.5
MsG0280009478.01.T03 MTR_1g022215 46.377 69 37 0 32 100 2 70 3.66e-16 70.9
MsG0280009478.01.T03 MTR_7g103930 58.209 67 18 1 89 155 14 70 4.67e-16 71.6
MsG0280009478.01.T03 MTR_1g054905 50.769 65 32 0 23 87 80 144 7.91e-16 72.0
MsG0280009478.01.T03 MTR_6g016355 37.864 103 54 1 1 103 83 175 1.05e-15 72.0
MsG0280009478.01.T03 MTR_4g035890 50.000 58 29 0 22 79 92 149 2.53e-15 70.5
MsG0280009478.01.T03 MTR_1g109000 44.444 81 45 0 23 103 5 85 3.91e-15 68.2
MsG0280009478.01.T03 MTR_5g047250 32.824 131 61 1 51 181 4 107 1.31e-14 67.4
MsG0280009478.01.T03 MTR_8g059135 39.130 92 56 0 47 138 31 122 1.49e-14 67.8
MsG0280009478.01.T03 MTR_4g094272 44.444 72 39 1 20 91 70 140 1.61e-14 68.2
MsG0280009478.01.T03 MTR_3g462490 32.353 136 41 1 22 157 79 163 2.44e-14 70.9
MsG0280009478.01.T03 MTR_4g094370 46.875 64 34 0 23 86 14 77 1.02e-13 64.3
MsG0280009478.01.T03 MTR_4g064590 38.462 117 64 3 64 177 46 157 1.48e-13 65.9
MsG0280009478.01.T03 MTR_1g052310 35.238 105 68 0 75 179 17 121 3.45e-13 64.3
MsG0280009478.01.T03 MTR_3g090920 32.174 115 62 2 59 173 2 100 6.93e-13 62.8
MsG0280009478.01.T03 MTR_8g036690 37.975 79 33 1 75 153 2 64 2.05e-12 60.5
MsG0280009478.01.T03 MTR_5g022720 46.269 67 36 0 91 157 1 67 2.81e-12 64.3
MsG0280009478.01.T03 MTR_6g060050 39.796 98 54 3 85 179 54 149 3.29e-12 62.0
MsG0280009478.01.T03 MTR_2g088140 51.786 56 27 0 115 170 59 114 4.39e-12 61.2
MsG0280009478.01.T03 MTR_5g083510 42.222 90 48 1 91 180 5 90 5.14e-12 60.1
MsG0280009478.01.T03 MTR_1g045560 35.577 104 51 2 50 153 1 88 5.30e-12 60.1
MsG0280009478.01.T03 MTR_1g087480 50.909 55 27 0 22 76 166 220 7.32e-12 62.4
MsG0280009478.01.T03 MTR_5g056500 37.037 81 51 0 23 103 9 89 1.19e-11 59.7
MsG0280009478.01.T03 MTR_6g007540 43.590 78 41 1 111 188 21 95 1.50e-11 60.1
MsG0280009478.01.T03 MTR_5g031620 43.750 80 45 0 101 180 141 220 1.59e-11 61.6
MsG0280009478.01.T03 MTR_3g071490 64.444 45 16 0 136 180 14 58 1.66e-11 57.8
MsG0280009478.01.T03 MTR_4g098670 41.026 78 46 0 100 177 17 94 1.96e-11 58.5
MsG0280009478.01.T03 MTR_8g069135 46.154 65 34 1 17 81 162 225 3.21e-11 61.6
MsG0280009478.01.T03 MTR_3g064060 50.000 46 23 0 20 65 13 58 4.27e-11 56.6
MsG0280009478.01.T03 MTR_3g465840 42.424 66 38 0 72 137 3 68 9.78e-11 58.2
MsG0280009478.01.T01 MTR_5g085210 56.818 88 38 0 33 120 94 181 1.21e-32 115
MsG0280009478.01.T01 MTR_1g088650 63.218 87 32 0 34 120 62 148 1.30e-31 111
MsG0280009478.01.T01 MTR_1g034430 40.000 120 72 0 1 120 38 157 1.86e-28 103
MsG0280009478.01.T01 MTR_1g074240 68.182 66 21 0 59 124 1 66 1.90e-27 97.4
MsG0280009478.01.T01 MTR_2g059470 67.742 62 20 0 59 120 1 62 2.49e-26 94.7
MsG0280009478.01.T01 MTR_7g013520 41.880 117 55 2 1 117 26 129 3.71e-26 97.4
MsG0280009478.01.T01 MTR_8g031800 54.878 82 37 0 36 117 9 90 1.53e-25 93.6
MsG0280009478.01.T01 MTR_5g049680 51.190 84 41 0 37 120 10 93 2.96e-25 92.8
MsG0280009478.01.T01 MTR_8g036780 46.667 90 48 0 27 116 3 92 2.77e-24 90.5
MsG0280009478.01.T01 MTR_6g089560 44.828 87 48 0 31 117 89 175 4.64e-24 93.2
MsG0280009478.01.T01 MTR_4g046027 49.485 97 36 1 17 100 73 169 1.19e-23 90.5
MsG0280009478.01.T01 MTR_6g453270 41.270 126 65 2 1 117 234 359 2.35e-23 94.0
MsG0280009478.01.T01 MTR_6g016265 47.619 84 44 0 37 120 18 101 2.81e-23 88.2
MsG0280009478.01.T01 MTR_8g099580 38.235 136 74 2 1 127 141 275 4.19e-23 92.0
MsG0280009478.01.T01 MTR_6g046670 46.154 91 44 1 21 111 91 176 1.57e-22 88.2
MsG0280009478.01.T01 MTR_1g050488 46.988 83 44 0 38 120 78 160 2.81e-22 86.7
MsG0280009478.01.T01 MTR_5g036320 46.429 84 45 0 37 120 58 141 5.28e-22 85.5
MsG0280009478.01.T01 MTR_1g074090 44.186 86 48 0 35 120 58 143 2.66e-21 84.0
MsG0280009478.01.T01 MTR_1g017840 50.000 76 38 0 43 118 63 138 5.33e-21 83.6
MsG0280009478.01.T01 MTR_3g116210 37.500 120 66 1 1 120 49 159 7.20e-21 84.0
MsG0280009478.01.T01 MTR_5g083200 38.710 93 57 0 28 120 68 160 8.27e-21 84.0
MsG0280009478.01.T01 MTR_0002s1220 38.710 93 57 0 28 120 68 160 8.27e-21 84.0
MsG0280009478.01.T01 MTR_1g069475 45.238 84 46 0 37 120 143 226 1.23e-20 84.3
MsG0280009478.01.T01 MTR_1g081930 39.604 101 61 0 27 127 7 107 2.44e-20 80.9
MsG0280009478.01.T01 MTR_0015s0120 45.882 85 46 0 36 120 271 355 4.12e-20 84.7
MsG0280009478.01.T01 MTR_1g099430 46.914 81 41 1 36 114 103 183 4.14e-20 82.4
MsG0280009478.01.T01 MTR_8g022750 38.462 117 48 3 9 120 153 250 4.61e-20 83.6
MsG0280009478.01.T01 MTR_2g017550 48.000 75 39 0 36 110 86 160 1.02e-19 80.1
MsG0280009478.01.T01 MTR_5g034450 49.351 77 39 0 43 119 34 110 1.17e-19 78.6
MsG0280009478.01.T01 MTR_3g111390 36.559 93 59 0 28 120 68 160 1.51e-19 80.5
MsG0280009478.01.T01 MTR_1g070820 36.559 93 59 0 28 120 68 160 1.51e-19 80.5
MsG0280009478.01.T01 MTR_7g078610 53.731 67 31 0 34 100 27 93 1.82e-19 77.4
MsG0280009478.01.T01 MTR_4g029360 35.537 121 75 1 1 118 67 187 2.78e-19 80.5
MsG0280009478.01.T01 MTR_4g008270 55.000 60 27 0 61 120 13 72 2.99e-19 77.0
MsG0280009478.01.T01 MTR_4g035890 40.217 92 48 2 1 92 64 148 9.51e-19 77.4
MsG0280009478.01.T01 MTR_8g098925 43.182 88 36 1 30 117 51 124 3.99e-18 75.9
MsG0280009478.01.T01 MTR_2g027020 47.368 76 40 0 36 111 6 81 4.41e-18 76.6
MsG0280009478.01.T01 MTR_5g037920 42.857 84 47 1 35 118 75 157 5.36e-18 77.0
MsG0280009478.01.T01 MTR_1g045340 40.244 82 49 0 39 120 65 146 8.66e-18 75.5
MsG0280009478.01.T01 MTR_8g079540 37.500 104 63 1 19 122 11 112 9.71e-18 73.9
MsG0280009478.01.T01 MTR_8g038340 41.975 81 47 0 35 115 166 246 9.83e-18 76.6
MsG0280009478.01.T01 MTR_6g033225 44.304 79 44 0 42 120 54 132 1.02e-17 74.3
MsG0280009478.01.T01 MTR_5g068115 47.692 65 34 0 27 91 3 67 1.39e-17 72.0
MsG0280009478.01.T01 MTR_1g022215 44.595 74 41 0 46 119 2 75 4.30e-17 71.2
MsG0280009478.01.T01 MTR_1g054905 50.769 65 32 0 37 101 80 144 4.91e-17 73.2
MsG0280009478.01.T01 MTR_5g075610 56.604 53 23 0 64 116 1 53 6.57e-17 71.2
MsG0280009478.01.T01 MTR_1g109000 45.122 82 45 0 37 118 5 86 6.68e-17 70.9
MsG0280009478.01.T01 MTR_6g016355 37.143 105 56 1 15 119 83 177 1.25e-16 72.4
MsG0280009478.01.T01 MTR_8g031080 39.048 105 55 2 1 96 223 327 5.29e-16 73.6
MsG0280009478.01.T01 MTR_4g094272 44.444 72 39 1 34 105 70 140 2.22e-15 68.6
MsG0280009478.01.T01 MTR_0093s0070 52.632 57 27 0 61 117 126 182 2.47e-15 69.7
MsG0280009478.01.T01 MTR_8g039080 35.333 150 72 5 1 137 51 188 2.95e-15 70.1
MsG0280009478.01.T01 MTR_1g087480 40.000 90 47 1 1 90 138 220 1.97e-14 67.4
MsG0280009478.01.T01 MTR_4g094370 46.875 64 34 0 37 100 14 77 3.77e-14 63.5
MsG0280009478.01.T01 MTR_3g462490 49.206 63 32 0 36 98 79 141 3.82e-14 68.2
MsG0280009478.01.T01 MTR_2g102247 41.558 77 38 2 1 77 79 148 2.24e-13 63.5
MsG0280009478.01.T01 MTR_7g063280 41.270 63 37 0 58 120 72 134 2.30e-13 63.9
MsG0280009478.01.T01 MTR_2g047100 47.436 78 20 3 43 117 3 62 2.44e-13 62.0
MsG0280009478.01.T01 MTR_5g056500 35.227 88 57 0 37 124 9 96 3.44e-13 62.0
MsG0280009478.01.T01 MTR_1g018300 38.889 90 49 1 28 117 33 116 4.93e-13 64.3
MsG0280009478.01.T01 MTR_8g028785 31.250 128 55 2 1 119 216 319 7.25e-13 64.7
MsG0280009478.01.T01 MTR_3g064060 50.000 46 23 0 34 79 13 58 8.59e-12 57.0
MsG0280009478.01.T01 MTR_8g069135 46.154 65 34 1 31 95 162 225 1.75e-11 60.5
MsG0280009478.01.T01 MTR_2g059130 61.538 39 15 0 40 78 62 100 2.04e-11 58.2
MsG0280009478.01.T01 MTR_3g102000 38.095 84 48 2 1 81 144 226 2.43e-11 59.3
MsG0280009478.01.T01 MTR_3g060800 54.545 44 20 0 35 78 18 61 2.70e-11 55.8
MsG0280009478.01.T01 MTR_8g045330 33.721 86 53 1 35 120 74 155 3.16e-11 57.8
MsG0280009478.01.T01 MTR_8g059135 45.614 57 31 0 61 117 31 87 5.03e-11 56.6
MsG0280009478.01.T01 MTR_2g055490 47.273 55 29 0 63 117 12 66 5.41e-11 56.2
MsG0280009478.01.T01 MTR_6g045427 36.905 84 25 1 34 117 149 204 5.96e-11 58.5
MsG0280009478.01.T02 MTR_1g088650 64.844 128 45 0 34 161 62 189 2.77e-52 167
MsG0280009478.01.T02 MTR_5g085210 51.064 141 53 1 33 173 94 218 5.71e-44 147
MsG0280009478.01.T02 MTR_5g075610 63.265 98 34 1 64 161 1 96 2.78e-39 131
MsG0280009478.01.T02 MTR_8g022750 48.571 140 53 2 17 156 166 286 5.70e-39 136
MsG0280009478.01.T02 MTR_2g027020 44.311 167 89 1 37 203 7 169 2.51e-37 129
MsG0280009478.01.T02 MTR_1g034430 42.361 144 83 0 1 144 38 181 4.64e-37 128
MsG0280009478.01.T02 MTR_2g059470 67.470 83 27 0 59 141 1 83 6.53e-36 122
MsG0280009478.01.T02 MTR_7g013520 37.113 194 84 3 1 194 26 181 2.95e-34 120
MsG0280009478.01.T02 MTR_1g057740 36.735 196 63 2 1 196 7 141 4.33e-31 111
MsG0280009478.01.T02 MTR_4g029360 36.646 161 99 1 1 158 67 227 9.28e-30 110
MsG0280009478.01.T02 MTR_6g089560 37.195 164 81 2 31 194 89 230 1.81e-29 110
MsG0280009478.01.T02 MTR_6g016265 46.296 108 58 0 37 144 18 125 8.37e-29 105
MsG0280009478.01.T02 MTR_8g031080 38.953 172 79 2 22 193 253 398 7.91e-28 108
MsG0280009478.01.T02 MTR_3g116210 40.141 142 76 1 1 142 49 181 1.65e-27 103
MsG0280009478.01.T02 MTR_8g031800 48.571 105 53 1 36 140 9 112 1.90e-27 101
MsG0280009478.01.T02 MTR_4g008270 55.556 81 36 0 61 141 13 93 1.95e-27 100
MsG0280009478.01.T02 MTR_6g453270 40.690 145 77 2 1 136 234 378 2.66e-26 104
MsG0280009478.01.T02 MTR_5g049680 50.000 98 48 1 37 133 10 107 4.27e-26 97.4
MsG0280009478.01.T02 MTR_8g098925 40.476 126 61 1 30 155 51 162 4.93e-26 99.0
MsG0280009478.01.T02 MTR_5g083200 37.008 127 80 0 28 154 68 194 1.30e-25 99.0
MsG0280009478.01.T02 MTR_0002s1220 37.008 127 80 0 28 154 68 194 1.30e-25 99.0
MsG0280009478.01.T02 MTR_7g063280 41.748 103 60 0 58 160 72 174 1.94e-25 97.8
MsG0280009478.01.T02 MTR_5g037920 39.597 149 87 3 35 181 75 222 2.57e-25 99.0
MsG0280009478.01.T02 MTR_2g047100 45.763 118 43 3 43 157 3 102 3.94e-25 95.1
MsG0280009478.01.T02 MTR_8g099580 39.333 150 81 2 1 141 141 289 1.40e-24 99.0
MsG0280009478.01.T02 MTR_3g111390 35.433 127 82 0 28 154 68 194 2.31e-24 95.9
MsG0280009478.01.T02 MTR_1g070820 35.433 127 82 0 28 154 68 194 2.31e-24 95.9
MsG0280009478.01.T02 MTR_3g010950 34.375 160 75 2 35 194 3 132 6.41e-24 92.8
MsG0280009478.01.T02 MTR_1g069475 43.396 106 60 0 37 142 143 248 7.26e-24 95.9
MsG0280009478.01.T02 MTR_1g074240 61.538 65 25 0 59 123 1 65 8.24e-24 90.5
MsG0280009478.01.T02 MTR_8g036780 45.361 97 53 0 27 123 3 99 1.09e-23 91.7
MsG0280009478.01.T02 MTR_3g017480 44.167 120 66 1 76 195 2 120 1.75e-23 91.3
MsG0280009478.01.T02 MTR_1g050488 48.837 86 44 0 38 123 78 163 2.12e-23 92.4
MsG0280009478.01.T02 MTR_6g034915 32.796 186 78 2 40 195 7 175 8.23e-23 91.3
MsG0280009478.01.T02 MTR_1g045340 37.931 116 72 0 39 154 65 180 8.30e-23 91.3
MsG0280009478.01.T02 MTR_1g074090 45.652 92 50 0 35 126 58 149 1.23e-22 90.1
MsG0280009478.01.T02 MTR_4g046027 49.485 97 36 1 17 100 73 169 1.88e-22 90.1
MsG0280009478.01.T02 MTR_5g036320 49.412 85 43 0 37 121 58 142 2.01e-22 89.4
MsG0280009478.01.T02 MTR_5g094290 71.429 63 18 0 137 199 32 94 2.26e-22 92.0
MsG0280009478.01.T02 MTR_8g028785 34.483 174 81 2 1 165 216 365 3.23e-22 93.2
MsG0280009478.01.T02 MTR_1g081930 38.136 118 73 0 27 144 7 124 3.25e-22 88.2
MsG0280009478.01.T02 MTR_1g017840 44.444 99 55 0 43 141 63 161 1.15e-21 87.8
MsG0280009478.01.T02 MTR_0015s0120 46.809 94 50 0 36 129 271 364 1.54e-21 91.3
MsG0280009478.01.T02 MTR_6g046670 46.154 91 44 1 21 111 91 176 2.91e-21 87.4
MsG0280009478.01.T02 MTR_1g018300 40.000 120 66 1 28 147 33 146 8.71e-21 87.8
MsG0280009478.01.T02 MTR_1g099430 37.903 124 36 1 36 159 103 185 2.24e-20 85.5
MsG0280009478.01.T02 MTR_7g082130 38.017 121 51 2 52 172 39 135 1.96e-19 81.3
MsG0280009478.01.T02 MTR_7g006380 34.043 141 66 1 35 175 43 156 2.56e-19 82.0
MsG0280009478.01.T02 MTR_8g079540 38.053 113 68 1 19 131 11 121 2.63e-19 80.5
MsG0280009478.01.T02 MTR_1g052605 78.261 46 10 0 151 196 99 144 2.93e-19 80.9
MsG0280009478.01.T02 MTR_5g034450 48.750 80 41 0 43 122 34 113 4.47e-19 79.7
MsG0280009478.01.T02 MTR_2g017550 48.000 75 39 0 36 110 86 160 5.65e-19 80.9
MsG0280009478.01.T02 MTR_2g055490 35.606 132 52 1 63 194 12 110 7.13e-19 79.0
MsG0280009478.01.T02 MTR_7g078610 53.731 67 31 0 34 100 27 93 1.54e-18 77.4
MsG0280009478.01.T02 MTR_1g103580 31.013 158 57 1 34 191 136 241 1.82e-18 81.6
MsG0280009478.01.T02 MTR_0093s0070 45.000 80 44 0 61 140 126 205 1.20e-17 78.2
MsG0280009478.01.T02 MTR_4g035890 40.860 93 48 3 1 93 64 149 3.40e-17 75.5
MsG0280009478.01.T02 MTR_8g038340 41.975 81 47 0 35 115 166 246 5.18e-17 77.4
MsG0280009478.01.T02 MTR_6g033225 42.683 82 47 0 42 123 54 135 5.41e-17 74.7
MsG0280009478.01.T02 MTR_5g068115 47.692 65 34 0 27 91 3 67 1.05e-16 72.0
MsG0280009478.01.T02 MTR_6g045427 35.043 117 48 1 34 150 149 237 1.54e-16 75.9
MsG0280009478.01.T02 MTR_7g103930 58.209 67 18 1 103 169 14 70 4.84e-16 72.0
MsG0280009478.01.T02 MTR_1g022215 46.377 69 37 0 46 114 2 70 4.85e-16 70.9
MsG0280009478.01.T02 MTR_1g054905 50.769 65 32 0 37 101 80 144 8.40e-16 72.4
MsG0280009478.01.T02 MTR_6g016355 37.864 103 54 1 15 117 83 175 1.56e-15 72.0
MsG0280009478.01.T02 MTR_1g109000 44.444 81 45 0 37 117 5 85 4.91e-15 68.2
MsG0280009478.01.T02 MTR_8g059135 39.130 92 56 0 61 152 31 122 1.70e-14 67.8
MsG0280009478.01.T02 MTR_4g094272 44.444 72 39 1 34 105 70 140 1.92e-14 68.2
MsG0280009478.01.T02 MTR_5g047250 32.824 131 61 1 65 195 4 107 2.04e-14 67.0
MsG0280009478.01.T02 MTR_3g462490 32.353 136 41 1 36 171 79 163 3.28e-14 70.9
MsG0280009478.01.T02 MTR_8g039080 37.984 129 61 4 1 122 51 167 6.52e-14 68.6
MsG0280009478.01.T02 MTR_1g087480 40.000 90 47 1 1 90 138 220 9.15e-14 68.2
MsG0280009478.01.T02 MTR_4g094370 46.875 64 34 0 37 100 14 77 1.38e-13 63.9
MsG0280009478.01.T02 MTR_4g064590 38.462 117 64 3 78 191 46 157 1.92e-13 65.9
MsG0280009478.01.T02 MTR_1g052310 35.238 105 68 0 89 193 17 121 5.07e-13 63.9
MsG0280009478.01.T02 MTR_3g090920 32.174 115 62 2 73 187 2 100 1.11e-12 62.8
MsG0280009478.01.T02 MTR_2g102247 41.558 77 38 2 1 77 79 148 1.35e-12 63.5
MsG0280009478.01.T02 MTR_5g022720 46.269 67 36 0 105 171 1 67 3.91e-12 64.3
MsG0280009478.01.T02 MTR_6g060050 39.796 98 54 3 99 193 54 149 4.84e-12 62.0
MsG0280009478.01.T02 MTR_2g088140 51.786 56 27 0 129 184 59 114 5.21e-12 61.2
MsG0280009478.01.T02 MTR_1g045560 35.577 104 51 2 64 167 1 88 6.00e-12 60.1
MsG0280009478.01.T02 MTR_5g083510 42.222 90 48 1 105 194 5 90 6.94e-12 60.1
MsG0280009478.01.T02 MTR_8g036690 37.975 79 33 1 89 167 2 64 1.06e-11 58.9
MsG0280009478.01.T02 MTR_3g071490 64.444 45 16 0 150 194 14 58 1.52e-11 58.2
MsG0280009478.01.T02 MTR_5g056500 37.037 81 51 0 37 117 9 89 1.54e-11 59.7
MsG0280009478.01.T02 MTR_5g031620 43.750 80 45 0 115 194 141 220 1.75e-11 61.6
MsG0280009478.01.T02 MTR_6g007540 43.590 78 41 1 125 202 21 95 1.95e-11 60.1
MsG0280009478.01.T02 MTR_4g098670 41.026 78 46 0 114 191 17 94 2.18e-11 58.9
MsG0280009478.01.T02 MTR_3g064060 50.000 46 23 0 34 79 13 58 4.72e-11 56.6
MsG0280009478.01.T02 MTR_8g069135 46.154 65 34 1 31 95 162 225 4.84e-11 61.6
MsG0280009478.01.T04 MTR_1g088650 64.423 104 37 0 2 105 86 189 2.00e-42 140
MsG0280009478.01.T04 MTR_5g075610 63.265 98 34 1 8 105 1 96 3.74e-40 131
MsG0280009478.01.T04 MTR_2g059470 67.470 83 27 0 3 85 1 83 1.72e-36 121
MsG0280009478.01.T04 MTR_5g085210 50.427 117 42 1 1 117 118 218 7.04e-33 117
MsG0280009478.01.T04 MTR_2g027020 43.151 146 79 1 2 147 28 169 4.59e-29 105
MsG0280009478.01.T04 MTR_4g008270 55.556 81 36 0 5 85 13 93 2.81e-28 100
MsG0280009478.01.T04 MTR_7g063280 41.748 103 60 0 2 104 72 174 5.40e-26 97.4
MsG0280009478.01.T04 MTR_8g022750 49.000 100 34 1 1 100 204 286 3.06e-25 98.2
MsG0280009478.01.T04 MTR_1g057740 54.762 84 38 0 57 140 58 141 1.57e-24 92.8
MsG0280009478.01.T04 MTR_1g074240 61.538 65 25 0 3 67 1 65 2.20e-24 90.5
MsG0280009478.01.T04 MTR_3g017480 44.167 120 66 1 20 139 2 120 4.69e-24 90.9
MsG0280009478.01.T04 MTR_7g013520 37.681 138 61 1 1 138 69 181 3.04e-23 90.5
MsG0280009478.01.T04 MTR_1g034430 44.318 88 49 0 1 88 94 181 3.77e-23 90.5
MsG0280009478.01.T04 MTR_5g094290 71.429 63 18 0 81 143 32 94 5.35e-23 92.0
MsG0280009478.01.T04 MTR_8g098925 45.745 94 51 0 6 99 69 162 9.37e-23 89.0
MsG0280009478.01.T04 MTR_6g089560 36.496 137 65 2 2 138 116 230 2.26e-20 84.3
MsG0280009478.01.T04 MTR_8g031800 45.238 84 45 1 1 84 30 112 2.83e-20 80.9
MsG0280009478.01.T04 MTR_1g052605 78.261 46 10 0 95 140 99 144 4.88e-20 81.3
MsG0280009478.01.T04 MTR_7g082130 38.938 113 46 1 4 116 46 135 1.68e-19 79.7
MsG0280009478.01.T04 MTR_2g055490 35.606 132 52 1 7 138 12 110 1.74e-19 79.0
MsG0280009478.01.T04 MTR_6g034915 35.075 134 70 1 6 139 59 175 2.32e-19 80.5
MsG0280009478.01.T04 MTR_6g016265 42.529 87 50 0 2 88 39 125 1.08e-18 77.4
MsG0280009478.01.T04 MTR_3g116210 44.186 86 48 0 1 86 96 181 1.53e-18 78.6
MsG0280009478.01.T04 MTR_5g037920 39.683 126 73 3 2 125 98 222 2.27e-18 79.0
MsG0280009478.01.T04 MTR_0093s0070 45.000 80 44 0 5 84 126 205 5.31e-18 77.4
MsG0280009478.01.T04 MTR_8g031080 38.235 136 58 2 2 137 289 398 7.40e-18 79.7
MsG0280009478.01.T04 MTR_4g029360 40.196 102 61 0 1 102 126 227 2.37e-17 76.3
MsG0280009478.01.T04 MTR_7g103930 58.209 67 18 1 47 113 14 70 2.13e-16 71.6
MsG0280009478.01.T04 MTR_8g099580 45.238 84 46 0 2 85 206 289 3.71e-16 74.3
MsG0280009478.01.T04 MTR_2g047100 39.604 101 46 1 1 101 17 102 7.43e-16 69.3
MsG0280009478.01.T04 MTR_5g083200 34.694 98 64 0 1 98 97 194 1.12e-15 71.2
MsG0280009478.01.T04 MTR_0002s1220 34.694 98 64 0 1 98 97 194 1.12e-15 71.2
MsG0280009478.01.T04 MTR_5g049680 44.872 78 42 1 1 77 30 107 3.14e-15 67.8
MsG0280009478.01.T04 MTR_1g017840 41.667 84 49 0 2 85 78 161 4.05e-15 68.9
MsG0280009478.01.T04 MTR_3g111390 33.673 98 65 0 1 98 97 194 4.31e-15 69.7
MsG0280009478.01.T04 MTR_1g070820 33.673 98 65 0 1 98 97 194 4.31e-15 69.7
MsG0280009478.01.T04 MTR_1g045340 33.673 98 65 0 1 98 83 180 4.64e-15 69.3
MsG0280009478.01.T04 MTR_8g059135 39.130 92 56 0 5 96 31 122 5.03e-15 67.8
MsG0280009478.01.T04 MTR_5g047250 32.824 131 61 1 9 139 4 107 5.92e-15 67.0
MsG0280009478.01.T04 MTR_1g069475 40.698 86 51 0 1 86 163 248 6.38e-15 70.1
MsG0280009478.01.T04 MTR_6g453270 44.304 79 44 0 2 80 300 378 8.16e-15 70.9
MsG0280009478.01.T04 MTR_8g028785 42.857 84 48 0 26 109 282 365 1.08e-14 70.5
MsG0280009478.01.T04 MTR_1g050488 46.269 67 36 0 1 67 97 163 1.89e-14 67.4
MsG0280009478.01.T04 MTR_0015s0120 47.761 67 35 0 1 67 292 358 3.55e-14 68.9
MsG0280009478.01.T04 MTR_3g010950 31.387 137 64 2 2 138 26 132 3.68e-14 65.9
MsG0280009478.01.T04 MTR_1g074090 42.857 70 40 0 2 71 81 150 4.34e-14 65.9
MsG0280009478.01.T04 MTR_4g064590 38.462 117 64 3 22 135 46 157 6.55e-14 65.9
MsG0280009478.01.T04 MTR_8g036780 46.269 67 36 0 1 67 33 99 8.39e-14 64.3
MsG0280009478.01.T04 MTR_1g052310 35.238 105 68 0 33 137 17 121 1.07e-13 64.3
MsG0280009478.01.T04 MTR_3g090920 32.174 115 62 2 17 131 2 100 2.45e-13 63.2
MsG0280009478.01.T04 MTR_5g036320 48.438 64 33 0 2 65 79 142 4.57e-13 63.2
MsG0280009478.01.T04 MTR_8g036690 37.975 79 33 1 33 111 2 64 1.10e-12 60.1
MsG0280009478.01.T04 MTR_5g022720 46.269 67 36 0 49 115 1 67 1.38e-12 63.9
MsG0280009478.01.T04 MTR_2g088140 51.786 56 27 0 73 128 59 114 1.60e-12 61.2
MsG0280009478.01.T04 MTR_6g060050 39.796 98 54 3 43 137 54 149 1.61e-12 62.0
MsG0280009478.01.T04 MTR_1g045560 35.577 104 51 2 8 111 1 88 2.18e-12 60.1
MsG0280009478.01.T04 MTR_5g083510 42.222 90 48 1 49 138 5 90 2.26e-12 60.1
MsG0280009478.01.T04 MTR_3g071490 64.444 45 16 0 94 138 14 58 3.76e-12 58.5
MsG0280009478.01.T04 MTR_1g022215 43.860 57 32 0 2 58 14 70 4.58e-12 59.3
MsG0280009478.01.T04 MTR_5g034450 44.615 65 36 0 2 66 49 113 6.31e-12 59.3
MsG0280009478.01.T04 MTR_6g046670 47.273 55 29 0 1 55 122 176 7.10e-12 60.8
MsG0280009478.01.T04 MTR_4g098670 41.026 78 46 0 58 135 17 94 7.67e-12 58.5
MsG0280009478.01.T04 MTR_5g031620 43.750 80 45 0 59 138 141 220 7.77e-12 61.2
MsG0280009478.01.T04 MTR_6g007540 43.590 78 41 1 69 146 21 95 8.03e-12 60.1
MsG0280009478.01.T04 MTR_1g081930 36.364 88 56 0 1 88 37 124 8.14e-12 59.7
MsG0280009478.01.T04 MTR_6g033225 40.909 66 39 0 2 67 70 135 9.21e-12 59.7
MsG0280009478.01.T04 MTR_1g018300 38.462 91 50 1 1 91 62 146 2.11e-11 60.5
MsG0280009478.01.T04 MTR_8g079540 40.541 74 44 0 2 75 48 121 2.21e-11 58.2
MsG0280009478.01.T04 MTR_3g465840 42.424 66 38 0 30 95 3 68 4.20e-11 58.2
MsG0280009478.01.T04 MTR_1g103580 40.845 71 42 0 65 135 171 241 5.80e-11 59.3
MsG0280009478.01.T04 MTR_1g062840 40.299 67 40 0 31 97 9 75 6.24e-11 56.2
MsG0280009478.01.T04 MTR_6g045427 40.000 75 41 1 20 94 167 237 9.38e-11 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 50 sgRNAs with CRISPR-Local

Find 56 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTTCGCAACCTTACGATT+TGG 0.282929 2:-52709945 None:intergenic
TTTCTCCTCTTCCATGAATA+TGG 0.297087 2:+52710068 MsG0280009478.01.T01:CDS
TCTTCGCAACCTTACGATTT+GGG 0.308460 2:-52709944 None:intergenic
TTGGTTTGCAAAGCATCTTT+TGG 0.322763 2:+52709906 None:intergenic
ATTCATGGAAGAGGAGAAAT+AGG 0.340054 2:-52710064 None:intergenic
ATGTGGGAGCTAGCATTAGA+TGG 0.373035 2:-52710426 None:intergenic
AGTTTCTTTGATGCGTCAAC+GGG 0.380122 2:-52709975 None:intergenic
ACCTATACCCACCATATTCA+TGG 0.383548 2:-52710079 None:intergenic
TGCTTTAGATTCCAAGATAG+TGG 0.388013 2:+52710248 MsG0280009478.01.T01:intron
ACTCTCATGTTGAGTTCAAT+AGG 0.400718 2:+52710361 MsG0280009478.01.T01:CDS
CCGACGTCCACGTGGTTGAA+TGG 0.413188 2:+52710001 MsG0280009478.01.T01:CDS
AAAGTGATCAACCACTATCT+TGG 0.417370 2:-52710259 None:intergenic
CGTGGTTGAATGGTCGAAAT+CGG 0.459863 2:+52710011 MsG0280009478.01.T01:CDS
CACAGCAACATCGCCGAGAC+GGG 0.472610 2:-52710157 None:intergenic
TATTTGTCTTCGTGATGAAA+GGG 0.473870 2:+52710101 MsG0280009478.01.T01:CDS
TCAATAGGAGGCAAGCCAAT+GGG 0.479993 2:+52710376 MsG0280009478.01.T01:CDS
TCCTCTTCCATGAATATGGT+GGG 0.486782 2:+52710072 MsG0280009478.01.T01:CDS
TCCATGAATATGGTGGGTAT+AGG 0.499503 2:+52710078 MsG0280009478.01.T01:CDS
TAGTTTCTTTGATGCGTCAA+CGG 0.501050 2:-52709976 None:intergenic
CCGTCTCGGCGATGTTGCTG+TGG 0.501451 2:+52710158 MsG0280009478.01.T01:CDS
GTAGAGGATGATAGTGAGCT+TGG 0.503650 2:+52710291 MsG0280009478.01.T01:intron
GTATTTGTCTTCGTGATGAA+AGG 0.505117 2:+52710100 MsG0280009478.01.T01:CDS
GGTCGAAATCGGCTCATGGC+AGG 0.515968 2:+52710022 MsG0280009478.01.T01:CDS
GGGTCGCTCATGAGTTACAT+AGG 0.519266 2:+52710397 MsG0280009478.01.T01:CDS
CTCCTCTTCCATGAATATGG+TGG 0.534079 2:+52710071 MsG0280009478.01.T01:CDS
ACCCACCATATTCATGGAAG+AGG 0.538981 2:-52710073 None:intergenic
TGTGGGAGCTAGCATTAGAT+GGG 0.544142 2:-52710425 None:intergenic
CGGCGATGTTGCTGTGGGTG+AGG 0.548658 2:+52710164 MsG0280009478.01.T01:CDS
GGCAAACAGCCCAAATCGTA+AGG 0.548832 2:+52709935 MsG0280009478.01.T01:CDS
ACGGTACATTATCATAAATG+TGG 0.550882 2:-52710443 None:intergenic
TCATACGGCGTTGAAGTGGA+TGG 0.556771 2:+52710197 MsG0280009478.01.T01:CDS
ACAGATTGTTTCTCCCGTCT+CGG 0.560472 2:+52710144 MsG0280009478.01.T01:CDS
CCACAGCAACATCGCCGAGA+CGG 0.567747 2:-52710158 None:intergenic
GAATGGTCGAAATCGGCTCA+TGG 0.571638 2:+52710018 MsG0280009478.01.T01:CDS
AATCGTAAGGTTGCGAAGAG+AGG 0.574715 2:+52709948 MsG0280009478.01.T01:CDS
CGGTACATTATCATAAATGT+GGG 0.584084 2:-52710442 None:intergenic
CGTCTCGGCGATGTTGCTGT+GGG 0.588122 2:+52710159 MsG0280009478.01.T01:CDS
TTCAATAGGAGGCAAGCCAA+TGG 0.589295 2:+52710375 MsG0280009478.01.T01:CDS
TAACTCATGAGCGACCCCAT+TGG 0.590238 2:-52710391 None:intergenic
TCACTTTCGAACTTATGTAG+AGG 0.617026 2:+52710275 MsG0280009478.01.T01:intron
ATTTGTCTTCGTGATGAAAG+GGG 0.622948 2:+52710102 MsG0280009478.01.T01:CDS
GGTCGCTCATGAGTTACATA+GGG 0.631047 2:+52710398 MsG0280009478.01.T01:CDS
CAACGCCGTATGAAAAGCTA+CGG 0.634412 2:-52710187 None:intergenic
CTCATGTTGAGTTCAATAGG+AGG 0.636805 2:+52710364 MsG0280009478.01.T01:CDS
AAACTATACCGACGTCCACG+TGG 0.644776 2:+52709993 MsG0280009478.01.T01:CDS
CCATTCAACCACGTGGACGT+CGG 0.677609 2:-52710001 None:intergenic
CAATAGGAGGCAAGCCAATG+GGG 0.684319 2:+52710377 MsG0280009478.01.T01:CDS
GTGGGAGCTAGCATTAGATG+GGG 0.701610 2:-52710424 None:intergenic
ATTTCGACCATTCAACCACG+TGG 0.709271 2:-52710008 None:intergenic
GTTTCTTTGATGCGTCAACG+GGG 0.740987 2:-52709974 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CATAATATTTTTTTTTTTGA+AGG - Chr2:52710514-52710533 None:intergenic 10.0%
!!! TTTTTTTGCATAATATGAAT+TGG - Chr2:52710539-52710558 None:intergenic 15.0%
!! ATCAAAAAAGAAATACATGA+CGG - Chr2:52710465-52710484 None:intergenic 20.0%
ACGGTACATTATCATAAATG+TGG - Chr2:52710446-52710465 None:intergenic 30.0%
CGGTACATTATCATAAATGT+GGG - Chr2:52710445-52710464 None:intergenic 30.0%
TATTTGTCTTCGTGATGAAA+GGG + Chr2:52710101-52710120 MsG0280009478.01.T01:CDS 30.0%
AAAGTGATCAACCACTATCT+TGG - Chr2:52710262-52710281 None:intergenic 35.0%
ACTCTCATGTTGAGTTCAAT+AGG + Chr2:52710361-52710380 MsG0280009478.01.T01:CDS 35.0%
ATTCATGGAAGAGGAGAAAT+AGG - Chr2:52710067-52710086 None:intergenic 35.0%
ATTTGTCTTCGTGATGAAAG+GGG + Chr2:52710102-52710121 MsG0280009478.01.T01:CDS 35.0%
GTATTTGTCTTCGTGATGAA+AGG + Chr2:52710100-52710119 MsG0280009478.01.T01:CDS 35.0%
TAGTTTCTTTGATGCGTCAA+CGG - Chr2:52709979-52709998 None:intergenic 35.0%
TCACTTTCGAACTTATGTAG+AGG + Chr2:52710275-52710294 MsG0280009478.01.T01:intron 35.0%
TTTCTCCTCTTCCATGAATA+TGG + Chr2:52710068-52710087 MsG0280009478.01.T01:CDS 35.0%
! TGCTTTAGATTCCAAGATAG+TGG + Chr2:52710248-52710267 MsG0280009478.01.T01:intron 35.0%
ACCTATACCCACCATATTCA+TGG - Chr2:52710082-52710101 None:intergenic 40.0%
AGTTTCTTTGATGCGTCAAC+GGG - Chr2:52709978-52709997 None:intergenic 40.0%
CTCATGTTGAGTTCAATAGG+AGG + Chr2:52710364-52710383 MsG0280009478.01.T01:CDS 40.0%
TCCTCTTCCATGAATATGGT+GGG + Chr2:52710072-52710091 MsG0280009478.01.T01:CDS 40.0%
TCTTCGCAACCTTACGATTT+GGG - Chr2:52709947-52709966 None:intergenic 40.0%
!! CAAAGCATCTTTTGGATGCA+TGG + Chr2:52709914-52709933 MsG0280009478.01.T01:CDS 40.0%
!! TCCATGAATATGGTGGGTAT+AGG + Chr2:52710078-52710097 MsG0280009478.01.T01:CDS 40.0%
AATCGTAAGGTTGCGAAGAG+AGG + Chr2:52709948-52709967 MsG0280009478.01.T01:CDS 45.0%
ACCCACCATATTCATGGAAG+AGG - Chr2:52710076-52710095 None:intergenic 45.0%
ATGTGGGAGCTAGCATTAGA+TGG - Chr2:52710429-52710448 None:intergenic 45.0%
ATTTCGACCATTCAACCACG+TGG - Chr2:52710011-52710030 None:intergenic 45.0%
CAACGCCGTATGAAAAGCTA+CGG - Chr2:52710190-52710209 None:intergenic 45.0%
CGTGGTTGAATGGTCGAAAT+CGG + Chr2:52710011-52710030 MsG0280009478.01.T01:CDS 45.0%
CTCCTCTTCCATGAATATGG+TGG + Chr2:52710071-52710090 MsG0280009478.01.T01:CDS 45.0%
CTCTTCGCAACCTTACGATT+TGG - Chr2:52709948-52709967 None:intergenic 45.0%
GGTCGCTCATGAGTTACATA+GGG + Chr2:52710398-52710417 MsG0280009478.01.T01:CDS 45.0%
GTTTCTTTGATGCGTCAACG+GGG - Chr2:52709977-52709996 None:intergenic 45.0%
TCAATAGGAGGCAAGCCAAT+GGG + Chr2:52710376-52710395 MsG0280009478.01.T01:CDS 45.0%
TGTGGGAGCTAGCATTAGAT+GGG - Chr2:52710428-52710447 None:intergenic 45.0%
TTCAATAGGAGGCAAGCCAA+TGG + Chr2:52710375-52710394 MsG0280009478.01.T01:CDS 45.0%
! ACAGATTGTTTCTCCCGTCT+CGG + Chr2:52710144-52710163 MsG0280009478.01.T01:CDS 45.0%
! GTAGAGGATGATAGTGAGCT+TGG + Chr2:52710291-52710310 MsG0280009478.01.T01:intron 45.0%
! TGAGGCCGTAGCTTTTCATA+CGG + Chr2:52710182-52710201 MsG0280009478.01.T01:CDS 45.0%
!! CTTTTCATACGGCGTTGAAG+TGG + Chr2:52710193-52710212 MsG0280009478.01.T01:CDS 45.0%
!!! ATAATATTTTTTTTTTTGAA+GGG - Chr2:52710513-52710532 None:intergenic 5.0%
AAACTATACCGACGTCCACG+TGG + Chr2:52709993-52710012 MsG0280009478.01.T01:CDS 50.0%
CAATAGGAGGCAAGCCAATG+GGG + Chr2:52710377-52710396 MsG0280009478.01.T01:CDS 50.0%
GGCAAACAGCCCAAATCGTA+AGG + Chr2:52709935-52709954 MsG0280009478.01.T01:CDS 50.0%
GGGTCGCTCATGAGTTACAT+AGG + Chr2:52710397-52710416 MsG0280009478.01.T01:CDS 50.0%
GTGGGAGCTAGCATTAGATG+GGG - Chr2:52710427-52710446 None:intergenic 50.0%
TAACTCATGAGCGACCCCAT+TGG - Chr2:52710394-52710413 None:intergenic 50.0%
! GAATGGTCGAAATCGGCTCA+TGG + Chr2:52710018-52710037 MsG0280009478.01.T01:CDS 50.0%
! TCATACGGCGTTGAAGTGGA+TGG + Chr2:52710197-52710216 MsG0280009478.01.T01:CDS 50.0%
CCATTCAACCACGTGGACGT+CGG - Chr2:52710004-52710023 None:intergenic 55.0%
CACAGCAACATCGCCGAGAC+GGG - Chr2:52710160-52710179 None:intergenic 60.0%
CCACAGCAACATCGCCGAGA+CGG - Chr2:52710161-52710180 None:intergenic 60.0%
CCGACGTCCACGTGGTTGAA+TGG + Chr2:52710001-52710020 MsG0280009478.01.T01:CDS 60.0%
CGTCTCGGCGATGTTGCTGT+GGG + Chr2:52710159-52710178 MsG0280009478.01.T01:CDS 60.0%
! GGTCGAAATCGGCTCATGGC+AGG + Chr2:52710022-52710041 MsG0280009478.01.T01:CDS 60.0%
CCGTCTCGGCGATGTTGCTG+TGG + Chr2:52710158-52710177 MsG0280009478.01.T01:CDS 65.0%
CGGCGATGTTGCTGTGGGTG+AGG + Chr2:52710164-52710183 MsG0280009478.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr2 gene 52709913 52710563 52709913 ID=MsG0280009478.01;Name=MsG0280009478.01
Chr2 mRNA 52709913 52710423 52709913 ID=MsG0280009478.01.T01;Parent=MsG0280009478.01;Name=MsG0280009478.01.T01;_AED=0.43;_eAED=0.45;_QI=0|0|0|1|0|0|2|0|137
Chr2 exon 52709913 52710262 52709913 ID=MsG0280009478.01.T01:exon:8626;Parent=MsG0280009478.01.T01
Chr2 exon 52710360 52710423 52710360 ID=MsG0280009478.01.T01:exon:8627;Parent=MsG0280009478.01.T01
Chr2 CDS 52709913 52710262 52709913 ID=MsG0280009478.01.T01:cds;Parent=MsG0280009478.01.T01
Chr2 CDS 52710360 52710423 52710360 ID=MsG0280009478.01.T01:cds;Parent=MsG0280009478.01.T01
Chr2 mRNA 52709913 52710563 52709913 ID=MsG0280009478.01.T02;Parent=MsG0280009478.01;Name=MsG0280009478.01.T02;_AED=0.43;_eAED=0.43;_QI=0|-1|0|1|-1|1|1|0|216
Chr2 exon 52709913 52710563 52709913 ID=MsG0280009478.01.T02:exon:8628;Parent=MsG0280009478.01.T02
Chr2 CDS 52709913 52710563 52709913 ID=MsG0280009478.01.T02:cds;Parent=MsG0280009478.01.T02
Chr2 mRNA 52709955 52710563 52709955 ID=MsG0280009478.01.T03;Parent=MsG0280009478.01;Name=MsG0280009478.01.T03;_AED=0.44;_eAED=0.44;_QI=0|-1|0|1|-1|1|1|0|202
Chr2 exon 52709955 52710563 52709955 ID=MsG0280009478.01.T03:exon:8629;Parent=MsG0280009478.01.T03
Chr2 CDS 52709955 52710563 52709955 ID=MsG0280009478.01.T03:cds;Parent=MsG0280009478.01.T03
Chr2 mRNA 52710081 52710563 52710081 ID=MsG0280009478.01.T04;Parent=MsG0280009478.01;Name=MsG0280009478.01.T04;_AED=0.46;_eAED=0.46;_QI=0|-1|0|1|-1|0|1|0|160
Chr2 exon 52710081 52710563 52710081 ID=MsG0280009478.01.T04:exon:8630;Parent=MsG0280009478.01.T04
Chr2 CDS 52710081 52710563 52710081 ID=MsG0280009478.01.T04:cds;Parent=MsG0280009478.01.T04
Gene Sequence

>MsG0280009478.01.T03

AGGTTGCGAAGAGAGGATGCCCCGTTGACGCATCAAAGAAACTATACCGACGTCCACGTGGTTGAATGGTCGAAATCGGCTCATGGCAGGTACAAATGTAATATTGACGCCTATTTCTCCTCTTCCATGAATATGGTGGGTATAGGTATTTGTCTTCGTGATGAAAGGGGCGAATTTATTAGTGCTAAAACAGATTGTTTCTCCCGTCTCGGCGATGTTGCTGTGGGTGAGGCCGTAGCTTTTCATACGGCGTTGAAGTGGATGGCAGATCTTCACTATGATAATGTTGACTTTGCTTTAGATTCCAAGATAGTGGTTGATCACTTTCGAACTTATGTAGAGGATGATAGTGAGCTTGGATGTATCATGCATGCTTGTAGACAGTTGTTTGACAATAGTTTTCAGAACTCTCATGTTGAGTTCAATAGGAGGCAAGCCAATGGGGTCGCTCATGAGTTACATAGGGTAGCCCCATCTAATGCTAGCTCCCACATTTATGATAATGTACCGTCATGTATTTCTTTTTTGATTGATAATAAAAAGCACAAAATTTCTCCCTTCAAAAAAAAAAATATTATGAACCAATTCATATTATGCAAAAAAAGTTAA

>MsG0280009478.01.T01

GCAAAGCATCTTTTGGATGCATGGCAAACAGCCCAAATCGTAAGGTTGCGAAGAGAGGATGCCCCGTTGACGCATCAAAGAAACTATACCGACGTCCACGTGGTTGAATGGTCGAAATCGGCTCATGGCAGGTACAAATGTAATATTGACGCCTATTTCTCCTCTTCCATGAATATGGTGGGTATAGGTATTTGTCTTCGTGATGAAAGGGGCGAATTTATTAGTGCTAAAACAGATTGTTTCTCCCGTCTCGGCGATGTTGCTGTGGGTGAGGCCGTAGCTTTTCATACGGCGTTGAAGTGGATGGCAGATCTTCACTATGATAATGTTGACTTTGCTTTAGATTCCAAAACTCTCATGTTGAGTTCAATAGGAGGCAAGCCAATGGGGTCGCTCATGAGTTACATAGGGTAG

>MsG0280009478.01.T02

GCAAAGCATCTTTTGGATGCATGGCAAACAGCCCAAATCGTAAGGTTGCGAAGAGAGGATGCCCCGTTGACGCATCAAAGAAACTATACCGACGTCCACGTGGTTGAATGGTCGAAATCGGCTCATGGCAGGTACAAATGTAATATTGACGCCTATTTCTCCTCTTCCATGAATATGGTGGGTATAGGTATTTGTCTTCGTGATGAAAGGGGCGAATTTATTAGTGCTAAAACAGATTGTTTCTCCCGTCTCGGCGATGTTGCTGTGGGTGAGGCCGTAGCTTTTCATACGGCGTTGAAGTGGATGGCAGATCTTCACTATGATAATGTTGACTTTGCTTTAGATTCCAAGATAGTGGTTGATCACTTTCGAACTTATGTAGAGGATGATAGTGAGCTTGGATGTATCATGCATGCTTGTAGACAGTTGTTTGACAATAGTTTTCAGAACTCTCATGTTGAGTTCAATAGGAGGCAAGCCAATGGGGTCGCTCATGAGTTACATAGGGTAGCCCCATCTAATGCTAGCTCCCACATTTATGATAATGTACCGTCATGTATTTCTTTTTTGATTGATAATAAAAAGCACAAAATTTCTCCCTTCAAAAAAAAAAATATTATGAACCAATTCATATTATGCAAAAAAAGTTAA

>MsG0280009478.01.T04

ATGAATATGGTGGGTATAGGTATTTGTCTTCGTGATGAAAGGGGCGAATTTATTAGTGCTAAAACAGATTGTTTCTCCCGTCTCGGCGATGTTGCTGTGGGTGAGGCCGTAGCTTTTCATACGGCGTTGAAGTGGATGGCAGATCTTCACTATGATAATGTTGACTTTGCTTTAGATTCCAAGATAGTGGTTGATCACTTTCGAACTTATGTAGAGGATGATAGTGAGCTTGGATGTATCATGCATGCTTGTAGACAGTTGTTTGACAATAGTTTTCAGAACTCTCATGTTGAGTTCAATAGGAGGCAAGCCAATGGGGTCGCTCATGAGTTACATAGGGTAGCCCCATCTAATGCTAGCTCCCACATTTATGATAATGTACCGTCATGTATTTCTTTTTTGATTGATAATAAAAAGCACAAAATTTCTCCCTTCAAAAAAAAAAATATTATGAACCAATTCATATTATGCAAAAAAAGTTAA
Protein sequence

>MsG0280009478.01.T03

RLRREDAPLTHQRNYTDVHVVEWSKSAHGRYKCNIDAYFSSSMNMVGIGICLRDERGEFISAKTDCFSRLGDVAVGEAVAFHTALKWMADLHYDNVDFALDSKIVVDHFRTYVEDDSELGCIMHACRQLFDNSFQNSHVEFNRRQANGVAHELHRVAPSNASSHIYDNVPSCISFLIDNKKHKISPFKKKNIMNQFILCKKS*

>MsG0280009478.01.T01

AKHLLDAWQTAQIVRLRREDAPLTHQRNYTDVHVVEWSKSAHGRYKCNIDAYFSSSMNMVGIGICLRDERGEFISAKTDCFSRLGDVAVGEAVAFHTALKWMADLHYDNVDFALDSKTLMLSSIGGKPMGSLMSYIG*

>MsG0280009478.01.T02

AKHLLDAWQTAQIVRLRREDAPLTHQRNYTDVHVVEWSKSAHGRYKCNIDAYFSSSMNMVGIGICLRDERGEFISAKTDCFSRLGDVAVGEAVAFHTALKWMADLHYDNVDFALDSKIVVDHFRTYVEDDSELGCIMHACRQLFDNSFQNSHVEFNRRQANGVAHELHRVAPSNASSHIYDNVPSCISFLIDNKKHKISPFKKKNIMNQFILCKKS*

>MsG0280009478.01.T04

MNMVGIGICLRDERGEFISAKTDCFSRLGDVAVGEAVAFHTALKWMADLHYDNVDFALDSKIVVDHFRTYVEDDSELGCIMHACRQLFDNSFQNSHVEFNRRQANGVAHELHRVAPSNASSHIYDNVPSCISFLIDNKKHKISPFKKKNIMNQFILCKKS*