AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280009653.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280009653.01.T01 MTR_2g069010 91.864 381 31 0 1 381 1 381 0.0 728
MsG0280009653.01.T01 MTR_2g068950 83.422 374 57 1 2 375 1 369 0.0 657
MsG0280009653.01.T01 MTR_2g068960 81.867 375 63 1 2 376 1 370 0.0 647
MsG0280009653.01.T01 MTR_2g069020 81.551 374 65 2 2 375 1 370 0.0 640
MsG0280009653.01.T01 MTR_2g069020 81.333 375 66 2 2 376 1 371 0.0 639
MsG0280009653.01.T01 MTR_2g069060 65.333 375 104 3 1 375 1 349 5.35e-178 499
MsG0280009653.01.T01 MTR_1g093120 56.948 367 151 3 12 375 8 370 9.23e-155 441
MsG0280009653.01.T01 MTR_7g056347 56.667 360 152 3 17 375 17 373 9.94e-154 438
MsG0280009653.01.T01 MTR_8g006930 57.500 360 149 3 17 375 17 373 8.12e-151 431
MsG0280009653.01.T01 MTR_1g093110 53.457 376 167 4 5 375 2 374 9.91e-151 431
MsG0280009653.01.T01 MTR_4g024660 56.389 360 153 3 17 375 17 373 1.37e-149 427
MsG0280009653.01.T01 MTR_1g093140 54.155 373 161 4 11 375 8 378 9.08e-148 423
MsG0280009653.01.T01 MTR_8g062600 56.111 360 154 3 17 375 17 373 8.08e-147 421
MsG0280009653.01.T01 MTR_4g119410 56.667 360 152 3 17 375 17 373 8.53e-147 421
MsG0280009653.01.T01 MTR_7g056393 57.222 360 150 3 17 375 17 373 4.07e-144 414
MsG0280009653.01.T01 MTR_8g063070 53.889 360 162 3 17 375 17 373 6.44e-144 413
MsG0280009653.01.T01 MTR_8g469400 56.944 360 138 6 17 375 17 360 8.36e-144 412
MsG0280009653.01.T01 MTR_8g009080 55.000 360 156 3 17 375 43 397 2.70e-141 407
MsG0280009653.01.T01 MTR_7g078010 55.000 360 158 3 17 375 17 373 5.65e-141 405
MsG0280009653.01.T01 MTR_2g069210 52.533 375 169 4 2 375 1 367 9.66e-141 405
MsG0280009653.01.T01 MTR_2g069190 51.596 376 175 4 2 375 1 371 6.33e-136 393
MsG0280009653.01.T01 MTR_8g009160 51.261 357 164 4 21 375 16 364 2.10e-134 389
MsG0280009653.01.T01 MTR_8g041620 50.964 363 171 4 16 375 16 374 7.11e-133 385
MsG0280009653.01.T01 MTR_2g069060 70.445 247 73 0 44 290 2 248 1.57e-132 380
MsG0280009653.01.T01 MTR_2g069090 50.663 377 178 5 2 375 1 372 1.61e-132 384
MsG0280009653.01.T01 MTR_8g009090 52.381 357 160 5 21 375 16 364 2.44e-132 384
MsG0280009653.01.T01 MTR_8g028435 52.661 357 159 5 21 375 16 364 2.97e-132 383
MsG0280009653.01.T01 MTR_8g041600 50.689 363 172 4 16 375 16 374 6.71e-132 383
MsG0280009653.01.T01 MTR_8g008930 53.352 358 156 7 21 375 16 365 2.11e-130 379
MsG0280009653.01.T01 MTR_8g009110 50.838 358 165 5 21 375 16 365 1.07e-128 374
MsG0280009653.01.T01 MTR_2g069300 49.444 360 175 4 18 375 4 358 9.86e-126 366
MsG0280009653.01.T01 MTR_8g009170 50.696 359 165 7 21 375 16 366 1.81e-125 366
MsG0280009653.01.T01 MTR_1g043770 50.975 359 167 4 18 375 5 355 1.47e-124 363
MsG0280009653.01.T01 MTR_0032s0040 49.072 377 175 8 11 377 6 375 7.69e-123 360
MsG0280009653.01.T01 MTR_1g043810 50.559 358 168 5 15 370 2 352 6.49e-122 357
MsG0280009653.01.T01 MTR_4g117880 49.582 359 169 7 21 375 16 366 1.80e-121 356
MsG0280009653.01.T01 MTR_1g043760 50.146 343 164 3 15 357 2 337 3.38e-120 352
MsG0280009653.01.T01 MTR_1g043775 50.877 342 160 4 15 355 2 336 2.15e-119 350
MsG0280009653.01.T01 MTR_7g029655 47.297 370 185 5 11 375 6 370 6.65e-117 344
MsG0280009653.01.T01 MTR_7g056353 49.304 359 150 5 17 374 19 346 1.28e-113 341
MsG0280009653.01.T01 MTR_1g070185 47.645 361 176 5 17 375 18 367 7.45e-112 331
MsG0280009653.01.T01 MTR_8g009150 44.693 358 167 6 21 375 16 345 9.02e-112 330
MsG0280009653.01.T01 MTR_8g009120 46.369 358 169 7 21 375 16 353 1.19e-110 328
MsG0280009653.01.T01 MTR_8g009080 56.777 273 117 1 17 289 43 314 1.86e-110 327
MsG0280009653.01.T01 MTR_7g078010 55.839 274 119 1 17 290 17 288 4.82e-109 322
MsG0280009653.01.T01 MTR_8g009080 56.296 270 117 1 17 286 43 311 6.95e-108 320
MsG0280009653.01.T01 MTR_8g041600 50.181 277 135 2 16 290 16 291 2.50e-99 297
MsG0280009653.01.T01 MTR_1g043770 52.941 272 124 2 18 289 5 272 1.17e-98 295
MsG0280009653.01.T01 MTR_1g043810 52.174 276 128 3 15 289 2 274 1.20e-95 289
MsG0280009653.01.T01 MTR_1g043775 49.320 294 144 4 15 306 2 292 5.89e-94 283
MsG0280009653.01.T01 MTR_8g009170 50.185 271 129 4 21 289 16 282 1.11e-93 283
MsG0280009653.01.T01 MTR_7g105070 38.919 370 211 5 2 370 1 356 5.15e-91 278
MsG0280009653.01.T01 MTR_1g032250 41.341 358 200 3 17 373 21 369 2.61e-88 271
MsG0280009653.01.T01 MTR_1g032220 40.782 358 202 3 17 373 21 369 5.94e-88 270
MsG0280009653.01.T01 MTR_1g032140 40.223 358 204 3 17 373 14 362 1.19e-86 267
MsG0280009653.01.T01 MTR_8g009180 49.597 248 104 3 141 371 47 290 3.15e-77 240
MsG0280009653.01.T01 MTR_2g069070 62.983 181 47 1 1 181 1 161 9.81e-74 228
MsG0280009653.01.T01 MTR_7g056370 49.457 184 91 1 27 210 6 187 5.35e-59 191
MsG0280009653.01.T01 MTR_1g043840 47.619 189 99 0 170 358 37 225 2.55e-56 188
MsG0280009653.01.T01 MTR_1g043840 46.053 76 40 1 77 152 254 328 2.21e-15 77.0
MsG0280009653.01.T01 MTR_5g065010 32.164 342 217 9 33 369 4 335 5.43e-56 187
MsG0280009653.01.T01 MTR_6g015950 36.909 317 172 10 58 364 29 327 1.77e-55 186
MsG0280009653.01.T01 MTR_7g068650 32.277 347 211 8 24 356 6 342 2.81e-55 186
MsG0280009653.01.T01 MTR_5g032870 35.314 303 178 7 68 361 37 330 2.53e-53 180
MsG0280009653.01.T01 MTR_1g062110 33.431 341 204 7 32 359 26 356 9.74e-53 179
MsG0280009653.01.T01 MTR_3g092890 35.314 303 178 8 68 365 37 326 6.86e-52 176
MsG0280009653.01.T01 MTR_4g015790 30.769 364 221 9 28 369 9 363 1.20e-51 176
MsG0280009653.01.T01 MTR_4g087110 32.733 333 189 9 69 377 26 347 3.12e-51 175
MsG0280009653.01.T01 MTR_7g102820 33.333 348 203 6 32 359 25 363 5.13e-50 172
MsG0280009653.01.T01 MTR_8g024120 31.126 302 196 3 68 366 41 333 3.38e-49 169
MsG0280009653.01.T01 MTR_5g032880 35.644 303 177 7 68 361 375 668 5.68e-49 176
MsG0280009653.01.T01 MTR_5g032880 33.851 322 182 9 68 378 37 338 1.48e-47 172
MsG0280009653.01.T01 MTR_3g091350 30.791 354 212 10 21 365 21 350 7.43e-49 169
MsG0280009653.01.T01 MTR_7g016090 33.893 298 173 8 68 357 40 321 1.22e-48 167
MsG0280009653.01.T01 MTR_7g016090 33.893 298 173 8 68 357 38 319 1.55e-48 167
MsG0280009653.01.T01 MTR_1g070085 34.211 304 175 7 68 361 36 324 5.80e-48 166
MsG0280009653.01.T01 MTR_1g070085 34.211 304 175 7 68 361 36 324 5.80e-48 166
MsG0280009653.01.T01 MTR_4g099380 45.399 163 84 1 19 181 124 281 3.91e-47 162
MsG0280009653.01.T01 MTR_2g068840 31.672 341 199 11 32 357 21 342 6.21e-47 164
MsG0280009653.01.T01 MTR_5g055820 30.704 355 218 10 32 375 12 349 2.51e-46 162
MsG0280009653.01.T01 MTR_4g087100 31.325 332 195 9 69 377 26 347 3.48e-46 162
MsG0280009653.01.T01 MTR_2g072910 27.557 352 238 7 32 377 16 356 1.00e-45 160
MsG0280009653.01.T01 MTR_3g091360 31.803 305 189 7 68 365 51 343 1.30e-45 160
MsG0280009653.01.T01 MTR_1g070120 33.443 305 175 9 68 361 37 324 1.36e-45 160
MsG0280009653.01.T01 MTR_5g082750 30.110 362 231 10 24 374 5 355 5.58e-45 159
MsG0280009653.01.T01 MTR_0009s0050 29.282 362 225 11 32 381 12 354 5.83e-45 159
MsG0280009653.01.T01 MTR_5g048850 31.024 332 207 8 33 357 13 329 7.43e-45 158
MsG0280009653.01.T01 MTR_1g070080 31.429 315 197 7 68 375 37 339 7.53e-45 158
MsG0280009653.01.T01 MTR_3g043900 32.448 339 209 9 32 364 17 341 1.59e-44 157
MsG0280009653.01.T01 MTR_2g083000 31.271 291 185 3 66 356 30 305 2.15e-44 156
MsG0280009653.01.T01 MTR_5g048570 30.199 351 212 12 32 370 12 341 2.25e-44 157
MsG0280009653.01.T01 MTR_1g070135 31.148 305 182 6 68 361 37 324 2.34e-44 157
MsG0280009653.01.T01 MTR_0009s0050 29.915 351 215 11 32 370 12 343 2.45e-44 157
MsG0280009653.01.T01 MTR_3g070860 29.155 367 228 10 24 374 6 356 7.20e-44 155
MsG0280009653.01.T01 MTR_7g102720 31.818 308 187 5 64 364 32 323 9.87e-44 155
MsG0280009653.01.T01 MTR_1g044105 44.379 169 89 3 18 182 5 172 2.14e-43 149
MsG0280009653.01.T01 MTR_2g072890 27.616 344 232 7 33 370 17 349 3.68e-43 154
MsG0280009653.01.T01 MTR_5g085330 31.329 316 173 11 67 361 3 295 4.58e-43 152
MsG0280009653.01.T01 MTR_5g048740 30.791 354 204 12 33 369 11 340 5.04e-43 153
MsG0280009653.01.T01 MTR_8g074070 34.568 324 186 12 63 375 46 354 6.09e-43 153
MsG0280009653.01.T01 MTR_3g083370 32.143 308 163 12 68 357 3 282 7.23e-43 152
MsG0280009653.01.T01 MTR_0328s0030 29.775 356 224 11 33 379 11 349 7.88e-43 153
MsG0280009653.01.T01 MTR_3g072820 31.392 309 187 7 58 356 31 324 1.04e-42 152
MsG0280009653.01.T01 MTR_1g034120 30.960 323 188 8 68 365 25 337 1.15e-42 152
MsG0280009653.01.T01 MTR_4g087120 29.129 333 201 10 69 377 26 347 1.47e-42 152
MsG0280009653.01.T01 MTR_2g025120 29.841 315 179 11 68 363 3 294 1.54e-42 151
MsG0280009653.01.T01 MTR_7g016080 32.817 323 181 11 51 364 25 320 2.07e-42 151
MsG0280009653.01.T01 MTR_4g087090 29.268 328 204 8 68 377 29 346 2.08e-42 152
MsG0280009653.01.T01 MTR_5g055690 29.345 351 228 7 32 375 12 349 2.30e-42 152
MsG0280009653.01.T01 MTR_3g045230 29.706 340 218 8 32 364 17 342 3.14e-42 151
MsG0280009653.01.T01 MTR_4g087140 28.818 347 205 9 62 377 13 348 4.33e-42 151
MsG0280009653.01.T01 MTR_1g034060 30.960 323 188 8 68 365 25 337 5.44e-42 150
MsG0280009653.01.T01 MTR_8g075890 32.700 263 166 4 63 317 33 292 6.25e-42 150
MsG0280009653.01.T01 MTR_3g088565 31.119 286 174 7 67 344 1 271 9.30e-42 149
MsG0280009653.01.T01 MTR_8g074050 34.459 296 173 9 63 349 46 329 2.30e-41 149
MsG0280009653.01.T01 MTR_5g048550 28.375 363 235 9 23 375 1 348 3.08e-41 149
MsG0280009653.01.T01 MTR_3g058610 32.157 255 166 3 69 317 39 292 3.11e-41 149
MsG0280009653.01.T01 MTR_7g062580 29.470 302 197 5 69 365 55 345 3.20e-41 149
MsG0280009653.01.T01 MTR_0009s0480 28.986 345 221 9 33 369 12 340 4.29e-41 148
MsG0280009653.01.T01 MTR_7g081710 30.211 331 211 8 36 359 17 334 5.33e-41 148
MsG0280009653.01.T01 MTR_8g075830 33.591 259 157 5 69 317 39 292 8.25e-41 148
MsG0280009653.01.T01 MTR_2g083030 30.000 310 197 4 52 356 16 310 1.40e-40 146
MsG0280009653.01.T01 MTR_5g055900 28.895 353 226 9 32 375 12 348 2.49e-40 146
MsG0280009653.01.T01 MTR_5g059130 28.659 328 212 9 38 357 14 327 2.92e-40 145
MsG0280009653.01.T01 MTR_7g062570 30.240 334 210 8 32 357 19 337 3.05e-40 146
MsG0280009653.01.T01 MTR_1g034140 29.940 334 188 10 69 377 27 339 4.52e-40 145
MsG0280009653.01.T01 MTR_3g117420 32.026 306 189 9 63 361 46 339 6.76e-40 145
MsG0280009653.01.T01 MTR_5g048470 27.729 339 229 7 32 365 17 344 8.26e-40 145
MsG0280009653.01.T01 MTR_4g093840 28.616 318 203 9 69 375 62 366 1.12e-39 145
MsG0280009653.01.T01 MTR_8g064200 27.434 339 229 7 32 365 17 343 1.37e-39 144
MsG0280009653.01.T01 MTR_5g055680 28.409 352 227 9 33 375 13 348 1.62e-39 144
MsG0280009653.01.T01 MTR_8g064200 27.434 339 229 7 32 365 22 348 1.78e-39 144
MsG0280009653.01.T01 MTR_1g062110 31.985 272 169 5 32 290 26 294 3.57e-39 142
MsG0280009653.01.T01 MTR_5g011250 27.114 343 228 8 33 361 8 342 7.14e-39 142
MsG0280009653.01.T01 MTR_2g437380 32.491 277 169 7 88 356 70 336 7.36e-39 142
MsG0280009653.01.T01 MTR_1g102070 32.154 311 181 6 66 359 56 353 1.05e-38 142
MsG0280009653.01.T01 MTR_1g048940 28.746 327 216 6 38 359 18 332 1.19e-38 142
MsG0280009653.01.T01 MTR_8g074070 33.333 318 179 11 63 375 46 335 1.27e-38 141
MsG0280009653.01.T01 MTR_3g063180 28.249 354 225 9 25 364 2 340 2.83e-38 140
MsG0280009653.01.T01 MTR_5g022020 31.461 267 164 5 69 323 39 298 2.98e-38 140
MsG0280009653.01.T01 MTR_2g068800 28.571 287 165 8 32 306 21 279 3.13e-38 139
MsG0280009653.01.T01 MTR_5g055800 27.778 342 228 7 33 369 13 340 1.12e-37 139
MsG0280009653.01.T01 MTR_5g005570 33.000 300 172 7 64 356 32 309 1.23e-37 138
MsG0280009653.01.T01 MTR_3g072810 31.672 341 198 10 33 361 6 323 1.75e-37 138
MsG0280009653.01.T01 MTR_1g070085 34.454 238 139 4 131 361 19 246 3.93e-37 135
MsG0280009653.01.T01 MTR_2g102570 28.923 325 185 9 56 360 39 337 8.88e-37 137
MsG0280009653.01.T01 MTR_1g070100 34.454 238 139 4 131 361 15 242 2.26e-36 133
MsG0280009653.01.T01 MTR_1g033810 27.869 305 200 9 60 356 38 330 2.27e-36 135
MsG0280009653.01.T01 MTR_4g116010 29.773 309 198 7 58 360 39 334 3.59e-36 135
MsG0280009653.01.T01 MTR_7g062600 28.525 305 197 8 69 365 51 342 5.56e-36 135
MsG0280009653.01.T01 MTR_7g451860 30.743 296 177 5 69 356 41 316 5.85e-36 134
MsG0280009653.01.T01 MTR_7g047670 30.743 296 177 5 69 356 41 316 5.85e-36 134
MsG0280009653.01.T01 MTR_7g063730 29.577 284 181 7 90 365 82 354 2.83e-35 133
MsG0280009653.01.T01 MTR_7g062550 29.252 294 192 5 69 357 60 342 3.02e-35 133
MsG0280009653.01.T01 MTR_6g464620 29.545 308 193 7 66 359 61 358 3.49e-35 133
MsG0280009653.01.T01 MTR_3g026150 26.934 349 237 8 33 375 24 360 7.70e-35 132
MsG0280009653.01.T01 MTR_1g070135 32.906 234 136 5 68 290 37 260 1.16e-34 129
MsG0280009653.01.T01 MTR_0009s0050 31.535 241 148 5 149 381 25 256 1.86e-34 128
MsG0280009653.01.T01 MTR_8g033380 30.164 305 194 5 66 359 51 347 2.14e-34 130
MsG0280009653.01.T01 MTR_5g059140 27.760 317 201 10 42 346 16 316 3.91e-34 129
MsG0280009653.01.T01 MTR_0009s0050 32.609 230 138 5 149 370 25 245 7.06e-34 126
MsG0280009653.01.T01 MTR_3g117485 30.357 336 210 12 32 356 12 334 1.92e-33 127
MsG0280009653.01.T01 MTR_2g069130 67.368 95 25 2 73 165 12 102 3.16e-33 121
MsG0280009653.01.T01 MTR_7g045650 30.325 277 181 6 32 302 24 294 7.56e-33 125
MsG0280009653.01.T01 MTR_0009s0050 39.103 156 86 3 228 381 26 174 1.17e-32 121
MsG0280009653.01.T01 MTR_1g081840 27.244 312 201 7 63 359 47 347 2.95e-32 125
MsG0280009653.01.T01 MTR_2g437380 33.636 220 129 6 145 356 32 242 1.13e-31 121
MsG0280009653.01.T01 MTR_3g083370 32.365 241 125 10 68 290 3 223 1.17e-31 120
MsG0280009653.01.T01 MTR_6g092620 27.273 264 168 10 67 318 1 252 1.35e-31 121
MsG0280009653.01.T01 MTR_7g062560 27.338 278 185 4 90 365 80 342 1.42e-31 123
MsG0280009653.01.T01 MTR_0009s0480 29.851 268 171 7 33 292 12 270 1.90e-31 120
MsG0280009653.01.T01 MTR_4g087130 27.327 333 208 9 68 377 25 346 3.90e-31 122
MsG0280009653.01.T01 MTR_5g055690 30.483 269 175 5 32 294 12 274 3.93e-31 119
MsG0280009653.01.T01 MTR_3g096500 28.527 319 191 7 60 356 57 360 4.08e-31 122
MsG0280009653.01.T01 MTR_4g074130 30.859 256 159 5 69 315 40 286 5.24e-31 121
MsG0280009653.01.T01 MTR_5g048850 30.712 267 170 7 33 292 13 271 1.85e-30 118
MsG0280009653.01.T01 MTR_2g025120 30.380 237 135 9 68 290 3 223 4.98e-30 115
MsG0280009653.01.T01 MTR_2g072910 28.090 267 183 5 32 293 16 278 1.08e-29 116
MsG0280009653.01.T01 MTR_3g117485 32.707 266 156 11 101 356 10 262 1.71e-29 115
MsG0280009653.01.T01 MTR_3g040410 28.617 311 178 10 69 360 6 291 5.67e-29 115
MsG0280009653.01.T01 MTR_1g027290 29.321 324 200 12 69 376 29 339 7.45e-29 115
MsG0280009653.01.T01 MTR_1g032240 39.459 185 100 3 168 349 2 177 1.06e-28 110
MsG0280009653.01.T01 MTR_0056s0160 26.695 236 160 4 149 378 8 236 2.27e-28 111
MsG0280009653.01.T01 MTR_3g088745 27.019 322 195 7 60 359 27 330 3.85e-28 113
MsG0280009653.01.T01 MTR_2g019370 24.854 342 185 10 68 374 27 331 4.70e-28 112
MsG0280009653.01.T01 MTR_8g093980 26.198 313 206 5 60 359 50 350 6.13e-28 113
MsG0280009653.01.T01 MTR_2g070870 26.524 328 189 13 68 374 27 323 8.71e-27 109
MsG0280009653.01.T01 MTR_3g026150 28.788 264 177 6 33 290 24 282 1.33e-26 107
MsG0280009653.01.T01 MTR_3g026150 28.692 237 155 5 145 375 29 257 1.71e-26 107
MsG0280009653.01.T01 MTR_8g461330 26.140 329 196 12 69 374 27 331 4.95e-26 107
MsG0280009653.01.T01 MTR_4g132770 46.316 95 50 1 230 323 32 126 5.49e-26 102
MsG0280009653.01.T01 MTR_6g088665 27.759 299 183 8 88 361 35 325 8.20e-26 106
MsG0280009653.01.T01 MTR_0009s0400 37.333 150 85 4 228 375 2 144 8.85e-26 102
MsG0280009653.01.T01 MTR_6g088665 27.667 300 183 8 88 361 35 326 1.24e-25 106
MsG0280009653.01.T01 MTR_1g086550 26.437 348 192 11 67 379 18 336 9.11e-25 103
MsG0280009653.01.T01 MTR_8g093930 24.850 334 217 8 42 359 24 339 1.50e-24 103
MsG0280009653.01.T01 MTR_1g011580 25.538 325 198 10 61 370 55 350 4.71e-24 102
MsG0280009653.01.T01 MTR_5g027230 25.484 310 186 10 68 362 5 284 2.89e-23 99.0
MsG0280009653.01.T01 MTR_4g123020 26.899 316 203 11 73 374 18 319 5.29e-23 98.6
MsG0280009653.01.T01 MTR_4g099390 54.651 86 36 2 291 375 1 84 5.49e-23 92.0
MsG0280009653.01.T01 MTR_5g025050 25.484 310 184 10 69 362 5 283 1.24e-22 97.4
MsG0280009653.01.T01 MTR_3g464530 25.769 260 164 6 69 315 34 277 6.20e-22 95.9
MsG0280009653.01.T01 MTR_4g096840 24.340 341 187 11 68 374 28 331 7.50e-22 95.5
MsG0280009653.01.T01 MTR_7g077670 27.097 310 202 9 60 360 2 296 1.31e-21 94.7
MsG0280009653.01.T01 MTR_8g102600 27.273 297 163 9 99 361 37 314 1.31e-21 94.7
MsG0280009653.01.T01 MTR_2g033270 25.697 323 202 9 67 374 17 316 1.72e-21 94.4
MsG0280009653.01.T01 MTR_8g030880 27.653 311 189 11 68 360 4 296 4.09e-21 93.2
MsG0280009653.01.T01 MTR_1g070110 28.926 242 127 5 134 370 26 227 1.35e-20 90.1
MsG0280009653.01.T01 MTR_4g115990 26.140 329 197 11 38 351 7 304 4.96e-20 90.1
MsG0280009653.01.T01 MTR_5g025090 25.581 258 170 7 68 318 4 246 2.83e-19 87.8
MsG0280009653.01.T01 MTR_5g025060 25.084 299 172 12 68 360 5 257 3.19e-19 87.0
MsG0280009653.01.T01 MTR_8g102600 29.756 205 127 6 166 361 68 264 9.28e-19 85.9
MsG0280009653.01.T01 MTR_1g027310 25.000 308 179 11 57 358 37 298 9.50e-17 80.5
MsG0280009653.01.T01 MTR_3g464530 24.255 235 149 6 69 290 34 252 6.63e-16 77.0
MsG0280009653.01.T01 MTR_8g008960 44.000 75 38 1 299 373 29 99 1.94e-15 72.0
MsG0280009653.01.T01 MTR_1g032230 29.286 140 77 1 17 156 15 132 2.01e-15 76.3
MsG0280009653.01.T01 MTR_4g011720 27.374 179 121 5 182 359 125 295 7.03e-15 75.1
MsG0280009653.01.T01 MTR_5g024940 32.540 126 76 3 239 362 147 265 1.32e-14 73.9
MsG0280009653.01.T01 MTR_3g040440 41.429 70 41 0 239 308 14 83 1.46e-14 73.6
MsG0280009653.01.T01 MTR_4g021360 23.125 320 217 12 69 373 7 312 6.65e-13 69.3
MsG0280009653.01.T01 MTR_4g100590 23.548 310 202 10 71 361 6 299 9.49e-13 68.9
MsG0280009653.01.T01 MTR_7g084360 33.333 168 64 3 180 346 7 127 4.46e-11 60.5
MsG0280009653.01.T01 MTR_4g021380 21.799 289 197 10 89 363 32 305 7.24e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280009653.01.T01 AT1G06620 52.925 359 163 3 18 375 12 365 3.66e-139 401
MsG0280009653.01.T01 AT2G30840 51.791 363 166 5 17 375 5 362 1.79e-130 379
MsG0280009653.01.T01 AT2G30830 51.220 369 166 7 10 375 1 358 1.02e-129 377
MsG0280009653.01.T01 AT5G59540 50.136 369 177 5 10 375 2 366 1.41e-129 377
MsG0280009653.01.T01 AT5G59530 51.081 370 171 6 10 375 1 364 2.45e-128 373
MsG0280009653.01.T01 AT2G25450 51.240 363 171 4 14 375 2 359 1.59e-126 369
MsG0280009653.01.T01 AT2G30840 50.964 363 163 6 17 375 5 356 4.44e-125 365
MsG0280009653.01.T01 AT1G06650 48.118 372 170 6 16 375 9 369 4.44e-125 365
MsG0280009653.01.T01 AT1G06640 48.128 374 171 6 14 375 7 369 2.71e-124 363
MsG0280009653.01.T01 AT1G03410 47.527 364 184 4 15 375 2 361 5.16e-123 360
MsG0280009653.01.T01 AT1G04350 50.276 362 170 6 17 375 6 360 8.23e-123 359
MsG0280009653.01.T01 AT1G03410 47.527 364 184 4 15 375 39 398 1.51e-122 360
MsG0280009653.01.T01 AT1G03400 46.961 362 179 3 15 375 2 351 2.77e-120 352
MsG0280009653.01.T01 AT3G61400 48.199 361 174 6 18 370 10 365 1.07e-119 352
MsG0280009653.01.T01 AT1G06645 46.631 371 178 8 14 375 20 379 1.14e-116 344
MsG0280009653.01.T01 AT5G43450 47.606 355 179 4 10 363 1 349 3.68e-115 340
MsG0280009653.01.T01 AT5G43440 46.814 361 183 6 19 375 10 365 3.11e-114 337
MsG0280009653.01.T01 AT1G03400 43.590 390 179 4 15 375 2 379 1.09e-113 337
MsG0280009653.01.T01 AT1G04380 46.154 364 172 6 13 375 5 345 9.14e-112 330
MsG0280009653.01.T01 AT1G06620 53.676 272 125 1 18 289 12 282 1.68e-109 322
MsG0280009653.01.T01 AT2G30840 52.000 275 130 2 17 289 5 279 2.23e-103 308
MsG0280009653.01.T01 AT5G59540 49.117 283 142 2 10 290 2 284 3.59e-99 296
MsG0280009653.01.T01 AT1G06650 47.719 285 132 3 16 290 9 286 5.80e-97 291
MsG0280009653.01.T01 AT1G06640 46.205 303 139 4 14 299 7 302 6.52e-96 289
MsG0280009653.01.T01 AT1G06640 47.387 287 134 3 14 290 7 286 2.72e-95 286
MsG0280009653.01.T01 AT3G61400 48.214 280 137 4 18 290 10 288 4.26e-94 283
MsG0280009653.01.T01 AT5G43450 46.181 288 152 2 10 296 1 286 1.33e-92 280
MsG0280009653.01.T01 AT5G43440 45.878 279 147 3 19 294 10 287 2.33e-90 274
MsG0280009653.01.T01 AT1G04380 44.286 280 137 3 13 292 5 265 8.06e-84 256
MsG0280009653.01.T01 AT3G13610 34.018 341 194 10 32 361 26 346 8.90e-61 200
MsG0280009653.01.T01 AT1G55290 33.431 341 197 9 32 361 25 346 8.32e-58 192
MsG0280009653.01.T01 AT2G36690 35.608 337 198 7 32 359 20 346 2.57e-57 191
MsG0280009653.01.T01 AT2G36690 35.608 337 198 7 32 359 20 346 2.57e-57 191
MsG0280009653.01.T01 AT5G24530 36.634 303 173 6 70 365 39 329 3.47e-56 187
MsG0280009653.01.T01 AT4G10500 35.256 312 188 6 68 374 43 345 5.38e-55 185
MsG0280009653.01.T01 AT3G12900 32.036 334 212 9 32 362 21 342 1.06e-53 181
MsG0280009653.01.T01 AT5G05600 30.194 361 233 8 13 364 7 357 2.18e-52 179
MsG0280009653.01.T01 AT4G10490 33.559 295 182 5 68 357 41 326 3.99e-51 174
MsG0280009653.01.T01 AT2G38240 31.176 340 212 9 26 356 5 331 3.43e-48 167
MsG0280009653.01.T01 AT2G44800 31.014 345 225 6 19 359 2 337 2.33e-47 165
MsG0280009653.01.T01 AT3G11180 30.027 373 230 9 7 364 30 386 1.89e-46 164
MsG0280009653.01.T01 AT3G11180 30.027 373 230 9 7 364 30 386 2.26e-46 164
MsG0280009653.01.T01 AT3G19000 29.619 341 191 7 69 380 32 352 8.03e-46 160
MsG0280009653.01.T01 AT4G16330 33.007 306 177 9 68 364 66 352 3.00e-44 157
MsG0280009653.01.T01 AT3G60290 32.024 331 206 7 36 359 19 337 2.96e-43 154
MsG0280009653.01.T01 AT3G21420 32.597 362 213 12 33 377 17 364 3.21e-43 154
MsG0280009653.01.T01 AT1G77330 32.222 270 157 8 67 322 1 258 8.59e-43 151
MsG0280009653.01.T01 AT1G78550 27.596 337 228 7 38 369 24 349 5.22e-42 150
MsG0280009653.01.T01 AT3G51240 33.463 257 160 4 69 317 38 291 5.34e-42 151
MsG0280009653.01.T01 AT1G62380 32.000 325 181 12 67 371 5 309 1.03e-41 149
MsG0280009653.01.T01 AT3G55970 29.213 356 228 10 23 364 4 349 2.93e-41 149
MsG0280009653.01.T01 AT1G17020 29.513 349 222 11 32 369 16 351 4.33e-41 148
MsG0280009653.01.T01 AT1G05010 30.844 308 189 11 68 363 3 298 3.04e-40 145
MsG0280009653.01.T01 AT1G12010 28.247 308 192 10 67 363 5 294 3.76e-40 145
MsG0280009653.01.T01 AT4G22880 28.488 344 223 10 33 361 7 342 4.26e-40 145
MsG0280009653.01.T01 AT4G22880 28.488 344 223 10 33 361 7 342 4.26e-40 145
MsG0280009653.01.T01 AT4G22880 28.488 344 223 10 33 361 7 342 4.26e-40 145
MsG0280009653.01.T01 AT5G08640 29.967 307 181 7 68 360 42 328 6.67e-40 145
MsG0280009653.01.T01 AT5G08640 29.967 307 181 7 68 360 42 328 6.67e-40 145
MsG0280009653.01.T01 AT4G25420 29.661 354 221 6 24 359 11 354 9.00e-40 145
MsG0280009653.01.T01 AT5G63590 31.596 307 184 8 61 356 6 297 2.16e-39 142
MsG0280009653.01.T01 AT1G17010 27.746 346 230 8 33 369 17 351 3.81e-39 143
MsG0280009653.01.T01 AT5G05600 30.314 287 188 7 13 290 7 290 4.68e-39 141
MsG0280009653.01.T01 AT3G19010 28.571 322 198 7 64 365 23 332 2.90e-38 140
MsG0280009653.01.T01 AT3G19010 28.571 322 198 7 64 365 23 332 2.90e-38 140
MsG0280009653.01.T01 AT5G07480 31.935 310 188 8 62 359 38 336 8.08e-38 139
MsG0280009653.01.T01 AT4G25310 29.310 290 184 7 88 369 70 346 1.08e-37 139
MsG0280009653.01.T01 AT5G12270 31.353 303 186 7 69 362 56 345 1.09e-36 137
MsG0280009653.01.T01 AT5G63600 31.803 305 177 9 63 357 27 310 2.84e-36 135
MsG0280009653.01.T01 AT4G25300 26.590 346 233 9 33 369 16 349 2.90e-36 135
MsG0280009653.01.T01 AT4G21200 29.012 324 194 6 38 356 21 313 4.06e-36 134
MsG0280009653.01.T01 AT1G60980 29.808 312 191 5 67 358 55 358 5.35e-36 135
MsG0280009653.01.T01 AT5G63600 31.699 306 177 10 63 357 27 311 4.48e-35 131
MsG0280009653.01.T01 AT3G19010 28.344 314 179 8 64 365 23 302 8.64e-35 130
MsG0280009653.01.T01 AT1G78550 27.273 275 187 5 100 369 5 271 2.74e-34 128
MsG0280009653.01.T01 AT5G07200 29.545 308 194 6 67 359 56 355 4.35e-34 130
MsG0280009653.01.T01 AT3G19000 31.474 251 130 6 69 290 32 269 5.85e-34 127
MsG0280009653.01.T01 AT5G20400 27.463 335 227 6 33 361 9 333 1.02e-33 128
MsG0280009653.01.T01 AT4G16330 33.962 212 123 6 158 364 47 246 4.21e-33 124
MsG0280009653.01.T01 AT1G80330 28.797 316 178 11 68 361 48 338 1.08e-32 125
MsG0280009653.01.T01 AT1G15550 28.710 310 174 11 68 357 56 338 2.82e-32 125
MsG0280009653.01.T01 AT1G50960 29.323 266 182 5 52 315 25 286 3.46e-32 124
MsG0280009653.01.T01 AT5G63595 27.119 295 167 7 61 339 17 279 9.15e-32 121
MsG0280009653.01.T01 AT4G25420 30.104 289 181 5 24 294 11 296 1.16e-31 122
MsG0280009653.01.T01 AT1G49390 27.066 351 229 8 20 361 3 335 1.17e-31 123
MsG0280009653.01.T01 AT2G19590 27.273 308 190 12 66 362 8 292 6.36e-31 120
MsG0280009653.01.T01 AT5G20550 28.808 302 198 7 56 349 32 324 1.84e-30 119
MsG0280009653.01.T01 AT1G80340 28.750 320 181 9 61 360 42 334 2.85e-30 119
MsG0280009653.01.T01 AT3G51240 34.973 183 113 2 141 317 25 207 3.22e-30 117
MsG0280009653.01.T01 AT5G51810 28.525 305 195 5 66 359 60 352 3.53e-30 119
MsG0280009653.01.T01 AT3G55970 29.682 283 182 9 23 291 4 283 3.97e-30 117
MsG0280009653.01.T01 AT5G54000 28.996 269 175 6 88 349 65 324 4.26e-29 116
MsG0280009653.01.T01 AT1G30040 26.708 322 200 12 68 374 30 330 3.03e-26 108
MsG0280009653.01.T01 AT1G78440 27.160 324 197 10 69 374 18 320 5.51e-26 107
MsG0280009653.01.T01 AT3G19010 28.226 248 153 6 64 291 23 265 7.34e-26 106
MsG0280009653.01.T01 AT1G44090 27.157 313 200 8 44 343 43 340 8.75e-26 107
MsG0280009653.01.T01 AT5G43935 27.551 294 184 9 69 360 19 285 1.44e-25 105
MsG0280009653.01.T01 AT2G19590 27.473 273 166 11 101 362 26 277 2.16e-25 104
MsG0280009653.01.T01 AT5G54000 28.458 253 165 6 104 349 1 244 2.66e-25 103
MsG0280009653.01.T01 AT5G51810 29.289 239 153 4 66 293 60 293 4.85e-25 103
MsG0280009653.01.T01 AT1G49390 28.090 267 172 7 104 361 1 256 1.80e-24 101
MsG0280009653.01.T01 AT5G63580 30.870 230 145 6 68 290 18 240 2.28e-24 100
MsG0280009653.01.T01 AT5G63580 31.416 226 141 6 68 286 18 236 3.27e-24 100
MsG0280009653.01.T01 AT4G25300 34.266 143 86 2 228 369 120 255 7.31e-24 99.8
MsG0280009653.01.T01 AT4G21690 26.006 323 175 10 69 360 47 336 8.51e-24 101
MsG0280009653.01.T01 AT2G34555 26.994 326 191 11 69 374 27 325 1.02e-23 100
MsG0280009653.01.T01 AT5G07480 33.508 191 112 5 176 359 45 227 1.63e-22 95.9
MsG0280009653.01.T01 AT4G25310 24.221 289 172 7 88 369 70 318 2.31e-22 97.1
MsG0280009653.01.T01 AT4G23340 26.752 314 198 10 60 360 1 295 2.44e-22 97.1
MsG0280009653.01.T01 AT1G47990 25.816 337 185 12 69 374 15 317 1.21e-20 92.0
MsG0280009653.01.T01 AT1G14130 25.256 293 188 9 69 352 9 279 1.70e-20 91.3
MsG0280009653.01.T01 AT1G14120 25.850 294 185 8 69 352 8 278 1.07e-19 89.4
MsG0280009653.01.T01 AT1G14120 25.850 294 185 8 69 352 8 278 1.07e-19 89.4
MsG0280009653.01.T01 AT1G14120 25.850 294 185 8 69 352 8 278 1.07e-19 89.4
MsG0280009653.01.T01 AT5G58660 24.151 265 164 7 67 303 32 287 8.47e-19 87.0
MsG0280009653.01.T01 AT5G51310 23.418 316 202 8 67 360 3 300 2.33e-18 85.5
MsG0280009653.01.T01 AT4G23340 31.522 184 111 6 185 360 1 177 3.21e-18 82.8
MsG0280009653.01.T01 AT1G02400 27.616 344 197 17 58 376 13 329 1.07e-17 83.6
MsG0280009653.01.T01 AT3G46500 26.101 318 206 9 62 361 7 313 2.26e-17 82.8
MsG0280009653.01.T01 AT3G47190 23.466 277 136 10 67 303 30 270 3.58e-17 82.0
MsG0280009653.01.T01 AT3G46490 26.625 323 198 10 65 363 15 322 6.09e-17 81.6
MsG0280009653.01.T01 AT3G50210 26.621 293 183 11 68 330 7 297 9.98e-17 80.9
MsG0280009653.01.T01 AT3G50210 26.621 293 183 11 68 330 7 297 9.98e-17 80.9
MsG0280009653.01.T01 AT3G50210 26.621 293 183 11 68 330 7 297 9.98e-17 80.9
MsG0280009653.01.T01 AT2G06960 36.170 141 69 3 222 362 25 144 2.84e-16 75.9
MsG0280009653.01.T01 AT3G46490 28.125 288 173 10 65 326 15 294 1.84e-15 77.0
MsG0280009653.01.T01 AT4G16765 30.256 195 121 6 179 363 57 246 8.46e-15 73.9
MsG0280009653.01.T01 AT4G16765 30.256 195 121 6 179 363 57 246 8.46e-15 73.9
MsG0280009653.01.T01 AT4G16765 30.256 195 121 6 179 363 57 246 8.46e-15 73.9
MsG0280009653.01.T01 AT3G49630 23.934 305 181 7 63 330 3 293 3.01e-14 73.6
MsG0280009653.01.T01 AT3G49620 24.812 266 171 5 87 330 60 318 5.26e-14 73.2
MsG0280009653.01.T01 AT3G49630 24.176 273 164 5 87 330 31 289 5.29e-14 72.8
MsG0280009653.01.T01 AT5G58660 22.619 252 158 7 67 290 32 274 5.89e-14 72.0
MsG0280009653.01.T01 AT4G16765 30.000 190 114 6 169 348 47 227 1.59e-13 70.1
MsG0280009653.01.T01 AT3G46500 26.336 262 172 7 62 305 7 265 2.22e-13 70.5
MsG0280009653.01.T01 AT1G52820 23.125 320 218 12 67 373 10 314 3.02e-13 70.5
MsG0280009653.01.T01 AT3G50210 29.940 167 110 3 171 330 49 215 5.25e-13 68.9
MsG0280009653.01.T01 AT1G35190 24.924 329 203 12 62 361 2 315 5.51e-13 69.7
MsG0280009653.01.T01 AT3G49630 28.662 157 110 1 176 330 64 220 7.24e-13 68.6
MsG0280009653.01.T01 AT4G16765 33.588 131 76 4 239 363 75 200 4.72e-12 65.1
MsG0280009653.01.T01 AT4G16765 30.657 137 86 3 169 296 47 183 5.78e-12 64.3

Find 78 sgRNAs with CRISPR-Local

Find 293 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGAATTCCAACACAAATTT+TGG 0.094027 2:-55831114 MsG0280009653.01.T01:CDS
CAGCAGCACCCATTTCTTTA+AGG 0.105980 2:+55830793 None:intergenic
TTAGATAACAGTTCCTTTAT+TGG 0.174396 2:+55826162 None:intergenic
TACTTCTTTGAAAGAGTATT+TGG 0.206669 2:-55826115 MsG0280009653.01.T01:CDS
GTTGTTCTATACAGCATTCT+AGG 0.271437 2:-55831542 None:intergenic
GTCTTGGTAAAGAGTAAAAT+TGG 0.277458 2:+55830992 None:intergenic
ATGGTTGCAACTGAAATTCT+TGG 0.310138 2:+55826237 None:intergenic
GGTGGTAGTTCATCGGCTTT+AGG 0.318370 2:+55830918 None:intergenic
TTGCTTTCACCTTAAAGAAA+TGG 0.322945 2:-55830802 MsG0280009653.01.T01:CDS
TCCTCACCTTGGCATCTTGT+TGG 0.330440 2:+55831060 None:intergenic
GTCCAAGGACTCATAGAAAA+TGG 0.332688 2:-55831335 MsG0280009653.01.T01:CDS
TTCAAAATGCAAGTGAGAAA+TGG 0.333502 2:-55831160 MsG0280009653.01.T01:CDS
AAGAAAATCCACCAATATAC+AGG 0.355188 2:-55826140 MsG0280009653.01.T01:CDS
AAAGAAGTATCCCTGTATAT+TGG 0.356497 2:+55826129 None:intergenic
AAAAGTGATGGGACCAATAA+AGG 0.359221 2:-55826175 MsG0280009653.01.T01:CDS
TGATCACTCACCTGAGAGTA+TGG 0.361160 2:-55826199 MsG0280009653.01.T01:CDS
TCAAAATGCAAGTGAGAAAT+GGG 0.362845 2:-55831159 MsG0280009653.01.T01:CDS
GTAATTAAAGAAAGTTTGAT+TGG 0.370300 2:+55831460 None:intergenic
GTCCCTACAATTGACTTAAC+AGG 0.381724 2:-55831227 MsG0280009653.01.T01:CDS
TGCTTTCACCTTAAAGAAAT+GGG 0.391852 2:-55830801 MsG0280009653.01.T01:CDS
TTCTTTATGTAACAACTTGA+AGG 0.407341 2:+55826050 None:intergenic
CTTTAAGGTGAAAGCAATCA+AGG 0.410401 2:+55830808 None:intergenic
AAAGCTAGCATCTGAGTGTT+TGG 0.411024 2:+55830704 None:intergenic
ATTCCTGTTAAGTCAATTGT+AGG 0.415919 2:+55831224 None:intergenic
TTCTTTCAAGTAATAAATCA+TGG 0.422804 2:-55831134 MsG0280009653.01.T01:CDS
ATTGATGTACCTCCCATTCA+TGG 0.436781 2:-55830621 MsG0280009653.01.T01:CDS
ACCAAGACCAATCTACTGAT+TGG 0.438969 2:-55830977 MsG0280009653.01.T01:CDS
GTTCATCGGCTTTAGGAGGA+TGG 0.442970 2:+55830925 None:intergenic
TGGTTGCAACTGAAATTCTT+GGG 0.448867 2:+55826238 None:intergenic
ATCTAATATCAATCATGGTT+CGG 0.448911 2:-55831276 MsG0280009653.01.T01:CDS
ACAACTACATCTCTCAAAAC+AGG 0.453932 2:+55831191 None:intergenic
GAGTTATTGTCAGAGGCTCT+TGG 0.455844 2:-55830831 MsG0280009653.01.T01:CDS
TCCAATCAGTAGATTGGTCT+TGG 0.463044 2:+55830976 None:intergenic
ATCTCATCCAAAATTTGTGT+TGG 0.467732 2:+55831107 None:intergenic
TTCATCGGCTTTAGGAGGAT+GGG 0.470229 2:+55830926 None:intergenic
TTGATTGGTTCAAAATAAAG+AGG 0.479135 2:+55831475 None:intergenic
CACTACAAGAGCTCCATGAA+TGG 0.483845 2:+55830608 None:intergenic
CCTATGGTTAACTCTGGCTC+AGG 0.486491 2:+55830732 None:intergenic
GAATTTGATGAGTCAAAGGT+TGG 0.494931 2:-55831359 MsG0280009653.01.T01:CDS
GTTAACTCTGGCTCAGGGCA+TGG 0.496528 2:+55830738 None:intergenic
TGTCTCTCCAATCAGTAGAT+TGG 0.498127 2:+55830970 None:intergenic
TGAGTGTTTGGTAGTGCCTA+TGG 0.501828 2:+55830716 None:intergenic
TTTGTATGAGTTATTGTCAG+AGG 0.506276 2:-55830838 MsG0280009653.01.T01:CDS
GAACAATCTAATATCAATCA+TGG 0.512601 2:-55831281 MsG0280009653.01.T01:CDS
CTTTAATTACAAAATCATGA+TGG 0.514591 2:-55831447 MsG0280009653.01.T01:exon
AAATTCTTCATGACAATCAG+TGG 0.516547 2:-55830644 MsG0280009653.01.T01:CDS
TGAATACACAAAAGAAGTAA+TGG 0.519577 2:-55830874 MsG0280009653.01.T01:CDS
ACAAAAGAAGTAATGGAACT+TGG 0.521561 2:-55830867 MsG0280009653.01.T01:CDS
AAAGGAATTTGATGAGTCAA+AGG 0.522155 2:-55831363 MsG0280009653.01.T01:CDS
ACTACAAGAGCTCCATGAAT+GGG 0.524949 2:+55830609 None:intergenic
TTCACAATATCACTGCAAAC+CGG 0.533149 2:+55830897 None:intergenic
TAAATCATCACTTGTGATTG+TGG 0.533378 2:+55831424 None:intergenic
GAGTCAAAGGTTGGTGTCCA+AGG 0.541962 2:-55831350 MsG0280009653.01.T01:CDS
CTCTCAAAACAGGATCATCA+TGG 0.546051 2:+55831201 None:intergenic
GTAGTGCCTATGGTTAACTC+TGG 0.548134 2:+55830726 None:intergenic
TCAAAATAAAGAGGTTGAAG+AGG 0.550093 2:+55831484 None:intergenic
TCTTTATGTAACAACTTGAA+GGG 0.556208 2:+55826051 None:intergenic
GAAGTATCCCTGTATATTGG+TGG 0.557804 2:+55826132 None:intergenic
GAACATTGGAGATCTTCTAC+AGG 0.566435 2:-55830586 MsG0280009653.01.T01:intron
ATCACAAGTGATGATTTAGC+AGG 0.567322 2:-55831419 MsG0280009653.01.T01:CDS
TCATCGGCTTTAGGAGGATG+GGG 0.570137 2:+55830927 None:intergenic
TTCCTGTTAAGTCAATTGTA+GGG 0.572686 2:+55831225 None:intergenic
ACAAGATGCCAAGGTGAGGA+AGG 0.573280 2:-55831057 MsG0280009653.01.T01:CDS
GGAGCTCTTGTAGTGAACAT+TGG 0.576553 2:-55830600 MsG0280009653.01.T01:CDS
GTAGTACTCCTTCCTCACCT+TGG 0.578772 2:+55831049 None:intergenic
GGTAGTTCATCGGCTTTAGG+AGG 0.580781 2:+55830921 None:intergenic
TAAAGCCGATGAACTACCAC+CGG 0.591747 2:-55830916 MsG0280009653.01.T01:CDS
GCAAACCGGTGGTAGTTCAT+CGG 0.597431 2:+55830911 None:intergenic
CTATGGTTAACTCTGGCTCA+GGG 0.607343 2:+55830733 None:intergenic
CCTGAGCCAGAGTTAACCAT+AGG 0.624567 2:-55830732 MsG0280009653.01.T01:CDS
ACCAACAAGATGCCAAGGTG+AGG 0.624622 2:-55831061 MsG0280009653.01.T01:CDS
ATTTCACCAACAAGATGCCA+AGG 0.628009 2:-55831066 MsG0280009653.01.T01:CDS
AACTCTGGCTCAGGGCATGG+TGG 0.629830 2:+55830741 None:intergenic
AGAAAATCCACCAATATACA+GGG 0.641624 2:-55826139 MsG0280009653.01.T01:CDS
CAAAATGCAAGTGAGAAATG+GGG 0.669107 2:-55831158 MsG0280009653.01.T01:CDS
ACAAGAGCTCCATGAATGGG+AGG 0.677240 2:+55830612 None:intergenic
ACAATATCACTGCAAACCGG+TGG 0.690579 2:+55830900 None:intergenic
TGTTCACAATAGAACATACG+TGG 0.706466 2:+55831299 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATTATTAATAATTAATAT+TGG + Chr2:55827736-55827755 None:intergenic 0.0%
!! AAATACCATAAAATATTATA+TGG + Chr2:55829241-55829260 None:intergenic 10.0%
!! ATATCTTATCAATTAATTTA+TGG + Chr2:55829284-55829303 None:intergenic 10.0%
!!! AATTAAATTTTAAATTTGAG+GGG + Chr2:55828471-55828490 None:intergenic 10.0%
!!! ATATACCATATAATATTTTA+TGG - Chr2:55829233-55829252 MsG0280009653.01.T01:intron 10.0%
!!! ATTCAATTATTTTAATACAA+TGG - Chr2:55829337-55829356 MsG0280009653.01.T01:intron 10.0%
!!! CTAATTAAATTTTAAATTTG+AGG + Chr2:55828473-55828492 None:intergenic 10.0%
!!! GTTGATTTTAATATAATTAT+TGG + Chr2:55830166-55830185 None:intergenic 10.0%
!!! TAGTATTTTTTGTTTAAAAA+TGG - Chr2:55827590-55827609 MsG0280009653.01.T01:intron 10.0%
!!! TTTATATTTTATTATTTTGC+AGG + Chr2:55827420-55827439 None:intergenic 10.0%
!!! TTTCAAGTTAAATATTATTT+TGG - Chr2:55829638-55829657 MsG0280009653.01.T01:intron 10.0%
!! AAATAATCTACCTATTTAAT+AGG + Chr2:55827889-55827908 None:intergenic 15.0%
!! ATCATTATTAATTCAAATTC+AGG - Chr2:55829721-55829740 MsG0280009653.01.T01:intron 15.0%
!! ATTAATTTATGGTAGAATTA+TGG + Chr2:55829273-55829292 None:intergenic 15.0%
!! ATTGTATTATTTGAATACAA+TGG - Chr2:55828874-55828893 MsG0280009653.01.T01:intron 15.0%
!! ATTTCATATGATCAAATTAA+AGG - Chr2:55829950-55829969 MsG0280009653.01.T01:intron 15.0%
!! TTAATTTATGGTAGAATTAT+GGG + Chr2:55829272-55829291 None:intergenic 15.0%
!! TTAGAATTATGATCATTATA+AGG + Chr2:55829672-55829691 None:intergenic 15.0%
!!! ATAATTAATATTGGCTTTTA+AGG + Chr2:55827727-55827746 None:intergenic 15.0%
!!! ATAATTTTATGATAAAGCTT+TGG + Chr2:55829983-55830002 None:intergenic 15.0%
!!! TAATTAATATTGGCTTTTAA+GGG + Chr2:55827726-55827745 None:intergenic 15.0%
!!! TATTTCATTTACTTTTAACA+TGG - Chr2:55829511-55829530 MsG0280009653.01.T01:intron 15.0%
!!! TATTTTTTGTTTAAAAATGG+AGG - Chr2:55827593-55827612 MsG0280009653.01.T01:intron 15.0%
!!! TTAAAACTTTTGAAATATGT+GGG + Chr2:55828077-55828096 None:intergenic 15.0%
!!! TTTAAAACTTTTGAAATATG+TGG + Chr2:55828078-55828097 None:intergenic 15.0%
!! AAAATATAAAGTAAAACCTG+AGG - Chr2:55827430-55827449 MsG0280009653.01.T01:intron 20.0%
!! AAATTAGAGTTAATCAACTT+AGG + Chr2:55827343-55827362 None:intergenic 20.0%
!! AATAAGCATATATGAAACAA+TGG - Chr2:55829848-55829867 MsG0280009653.01.T01:intron 20.0%
!! ACAAATATCACCTATTAAAT+AGG - Chr2:55827876-55827895 MsG0280009653.01.T01:intron 20.0%
!! ACTGTATTACTATAATACAA+TGG - Chr2:55829200-55829219 MsG0280009653.01.T01:intron 20.0%
!! ATGTATATTAATACAACATG+TGG - Chr2:55827179-55827198 MsG0280009653.01.T01:intron 20.0%
!! ATTATATTAATCAAATGTGG+GGG + Chr2:55829068-55829087 None:intergenic 20.0%
!! CACTTATTTAAAGAAAATTG+AGG + Chr2:55829309-55829328 None:intergenic 20.0%
!! CATTATATTAATCAAATGTG+GGG + Chr2:55829069-55829088 None:intergenic 20.0%
!! CTTTAATTACAAAATCATGA+TGG - Chr2:55826121-55826140 MsG0280009653.01.T01:CDS 20.0%
!! GCATTATATTAATCAAATGT+GGG + Chr2:55829070-55829089 None:intergenic 20.0%
!! GTAATTAAAGAAAGTTTGAT+TGG + Chr2:55826111-55826130 None:intergenic 20.0%
!! TCACTAATGAAAATATGTTT+AGG - Chr2:55827756-55827775 MsG0280009653.01.T01:intron 20.0%
!! TCATAATTCTAATAAACACT+CGG - Chr2:55829680-55829699 MsG0280009653.01.T01:intron 20.0%
!! TGCATTATATTAATCAAATG+TGG + Chr2:55829071-55829090 None:intergenic 20.0%
!! TTGAATAGTAACTTTATCTT+TGG + Chr2:55829017-55829036 None:intergenic 20.0%
!!! AACTTTGCTTATGTTATTTA+TGG + Chr2:55829169-55829188 None:intergenic 20.0%
!!! AATTAATATTGGCTTTTAAG+GGG + Chr2:55827725-55827744 None:intergenic 20.0%
!!! TAAAACTTTTGAAATATGTG+GGG + Chr2:55828076-55828095 None:intergenic 20.0%
!!! TTCTTTCAAGTAATAAATCA+TGG - Chr2:55826434-55826453 MsG0280009653.01.T01:intron 20.0%
!!! TTTTATTGATGAATATGTTG+TGG + Chr2:55828814-55828833 None:intergenic 20.0%
! AAAAGAAGTTACACAAGTTA+TGG - Chr2:55827910-55827929 MsG0280009653.01.T01:intron 25.0%
! AAAGTCTAACAATGTATCAA+AGG - Chr2:55831184-55831203 MsG0280009653.01.T01:CDS 25.0%
! AAATATTGACATAGTTACTC+AGG - Chr2:55827563-55827582 MsG0280009653.01.T01:intron 25.0%
! ACAACAATCTAAGGAATTAT+TGG + Chr2:55830477-55830496 None:intergenic 25.0%
! ACAAGTGATATTATTTAGAG+AGG + Chr2:55828905-55828924 None:intergenic 25.0%
! ATATTAATACAACATGTGGT+TGG - Chr2:55827183-55827202 MsG0280009653.01.T01:intron 25.0%
! ATCTAATATCAATCATGGTT+CGG - Chr2:55826292-55826311 MsG0280009653.01.T01:CDS 25.0%
! ATTTAATTAGCACTTCTCAT+TGG - Chr2:55828483-55828502 MsG0280009653.01.T01:intron 25.0%
! CGAGTCTATAAAAATAAACT+CGG - Chr2:55828746-55828765 MsG0280009653.01.T01:intron 25.0%
! GAAACAATGGTATAAATCTA+GGG - Chr2:55829861-55829880 MsG0280009653.01.T01:intron 25.0%
! GAACAATCTAATATCAATCA+TGG - Chr2:55826287-55826306 MsG0280009653.01.T01:CDS 25.0%
! GTACACTCATAAAAAATAGT+GGG - Chr2:55829883-55829902 MsG0280009653.01.T01:intron 25.0%
! GTATTATAGTAATACAGTGA+TGG + Chr2:55829198-55829217 None:intergenic 25.0%
! TCTTGCATATAAATGAAATG+AGG - Chr2:55827268-55827287 MsG0280009653.01.T01:intron 25.0%
! TCTTTATGTAACAACTTGAA+GGG + Chr2:55831520-55831539 None:intergenic 25.0%
! TGAAACAATGGTATAAATCT+AGG - Chr2:55829860-55829879 MsG0280009653.01.T01:intron 25.0%
! TGAAATTTAAAAGTTGACCA+TGG + Chr2:55829623-55829642 None:intergenic 25.0%
! TGAATACACAAAAGAAGTAA+TGG - Chr2:55826694-55826713 MsG0280009653.01.T01:intron 25.0%
! TTAGATAACAGTTCCTTTAT+TGG + Chr2:55831409-55831428 None:intergenic 25.0%
! TTATATTAATCAAATGTGGG+GGG + Chr2:55829067-55829086 None:intergenic 25.0%
! TTCTTTATGTAACAACTTGA+AGG + Chr2:55831521-55831540 None:intergenic 25.0%
!! CAATGAATGGATATATGTTT+TGG + Chr2:55830395-55830414 None:intergenic 25.0%
!! TTGATTGGTTCAAAATAAAG+AGG + Chr2:55826096-55826115 None:intergenic 25.0%
!!! AAAACTTTTGAAATATGTGG+GGG + Chr2:55828075-55828094 None:intergenic 25.0%
!!! ATATAATTATTGGCTTAGTG+TGG + Chr2:55830156-55830175 None:intergenic 25.0%
!!! ATATATGTTTTGGAGTTCAT+CGG + Chr2:55830385-55830404 None:intergenic 25.0%
!!! ATCATGTTGTGTTCTAAAAA+TGG + Chr2:55831353-55831372 None:intergenic 25.0%
!!! GAAAATGTGTTATTGATTCT+AGG + Chr2:55830089-55830108 None:intergenic 25.0%
!!! GGAAAGATAAACAACTTTTT+TGG + Chr2:55826558-55826577 None:intergenic 25.0%
!!! TACTTCTTTGAAAGAGTATT+TGG - Chr2:55831453-55831472 MsG0280009653.01.T01:exon 25.0%
!!! TATAATTATTGGCTTAGTGT+GGG + Chr2:55830155-55830174 None:intergenic 25.0%
!!! TGATTTAGTTTGTGTTATCT+TGG + Chr2:55829773-55829792 None:intergenic 25.0%
AAAACAGCTTCTTAAGCATA+AGG - Chr2:55827958-55827977 MsG0280009653.01.T01:intron 30.0%
AAAGGAATTTGATGAGTCAA+AGG - Chr2:55826205-55826224 MsG0280009653.01.T01:CDS 30.0%
AAATTCTTCATGACAATCAG+TGG - Chr2:55826924-55826943 MsG0280009653.01.T01:intron 30.0%
AAGAAAATCCACCAATATAC+AGG - Chr2:55831428-55831447 MsG0280009653.01.T01:CDS 30.0%
AGAAAATCCACCAATATACA+GGG - Chr2:55831429-55831448 MsG0280009653.01.T01:CDS 30.0%
AGACTTGATAAACCACATTA+AGG + Chr2:55828944-55828963 None:intergenic 30.0%
AGTTAATCAACTTAGGATCA+TGG + Chr2:55827336-55827355 None:intergenic 30.0%
AGTTTGTGTTATCTTGGTAT+AGG + Chr2:55829767-55829786 None:intergenic 30.0%
ATACTTAACACACAGTGAAT+TGG - Chr2:55828180-55828199 MsG0280009653.01.T01:intron 30.0%
ATCTCATCCAAAATTTGTGT+TGG + Chr2:55826464-55826483 None:intergenic 30.0%
ATTCCTGTTAAGTCAATTGT+AGG + Chr2:55826347-55826366 None:intergenic 30.0%
CACTTCAAATCATATAACCA+TGG - Chr2:55829603-55829622 MsG0280009653.01.T01:intron 30.0%
CTATGTTTAGATTTGTGTGA+AGG + Chr2:55830296-55830315 None:intergenic 30.0%
CTGAACACTATAGAATATAG+AGG - Chr2:55827083-55827102 MsG0280009653.01.T01:intron 30.0%
CTTCACACAAATCTAAACAT+AGG - Chr2:55830294-55830313 MsG0280009653.01.T01:intron 30.0%
GGACTTGATGAAAGAAAAAT+AGG + Chr2:55826066-55826085 None:intergenic 30.0%
GGTACACTCATAAAAAATAG+TGG - Chr2:55829882-55829901 MsG0280009653.01.T01:intron 30.0%
GTCTTGGTAAAGAGTAAAAT+TGG + Chr2:55826579-55826598 None:intergenic 30.0%
TAAATCATCACTTGTGATTG+TGG + Chr2:55826147-55826166 None:intergenic 30.0%
TAAGTATATCATTCTAGCAC+TGG + Chr2:55828167-55828186 None:intergenic 30.0%
TCAAAATAAAGAGGTTGAAG+AGG + Chr2:55826087-55826106 None:intergenic 30.0%
TCAAAATGCAAGTGAGAAAT+GGG - Chr2:55826409-55826428 MsG0280009653.01.T01:intron 30.0%
TCAAATCAACTTCCTTAATG+TGG - Chr2:55828929-55828948 MsG0280009653.01.T01:intron 30.0%
TCAACAGCAATCAAACATTT+CGG - Chr2:55830181-55830200 MsG0280009653.01.T01:intron 30.0%
TGACAGAAAAAGTGAACTAA+AGG - Chr2:55826187-55826206 MsG0280009653.01.T01:CDS 30.0%
TGCATATAAATGAAATGAGG+AGG - Chr2:55827271-55827290 MsG0280009653.01.T01:intron 30.0%
TGCTTTCACCTTAAAGAAAT+GGG - Chr2:55826767-55826786 MsG0280009653.01.T01:intron 30.0%
TGTCTCAAATGTATTTGACT+TGG + Chr2:55827826-55827845 None:intergenic 30.0%
TTATAGACTCGACGAAATAT+GGG + Chr2:55828737-55828756 None:intergenic 30.0%
TTCAAAATGCAAGTGAGAAA+TGG - Chr2:55826408-55826427 MsG0280009653.01.T01:intron 30.0%
TTCCTGTTAAGTCAATTGTA+GGG + Chr2:55826346-55826365 None:intergenic 30.0%
TTGCTTTCACCTTAAAGAAA+TGG - Chr2:55826766-55826785 MsG0280009653.01.T01:intron 30.0%
TTTATAGACTCGACGAAATA+TGG + Chr2:55828738-55828757 None:intergenic 30.0%
TTTGTATGAGTTATTGTCAG+AGG - Chr2:55826730-55826749 MsG0280009653.01.T01:intron 30.0%
! AAAGATTTTTCCAGATCCAT+AGG - Chr2:55830118-55830137 MsG0280009653.01.T01:intron 30.0%
! AATTCCTTAGATTGTTGTTG+CGG - Chr2:55830479-55830498 MsG0280009653.01.T01:intron 30.0%
! ACAAAAGAAGTAATGGAACT+TGG - Chr2:55826701-55826720 MsG0280009653.01.T01:intron 30.0%
! ATTTTGGATGAGATGATCAA+AGG - Chr2:55826470-55826489 MsG0280009653.01.T01:intron 30.0%
! TAATGTTTAGAGTATGTACC+TGG - Chr2:55830322-55830341 MsG0280009653.01.T01:intron 30.0%
! TATTTCCTTCTTTTTCTTCC+CGG - Chr2:55828647-55828666 MsG0280009653.01.T01:intron 30.0%
! TGGAATTCCAACACAAATTT+TGG - Chr2:55826454-55826473 MsG0280009653.01.T01:intron 30.0%
!! AAAGAAGTATCCCTGTATAT+TGG + Chr2:55831442-55831461 None:intergenic 30.0%
!! AGAGTTTTAGCAAAAAGTGT+AGG - Chr2:55831307-55831326 MsG0280009653.01.T01:CDS 30.0%
!! ATAATTATTGGCTTAGTGTG+GGG + Chr2:55830154-55830173 None:intergenic 30.0%
!!! GAGCTAGTTTTTTAGGAAAA+CGG - Chr2:55827781-55827800 MsG0280009653.01.T01:intron 30.0%
!!! TGTGAAGGTATTATGACTTT+TGG + Chr2:55830281-55830300 None:intergenic 30.0%
!!! TTAGGTTGAGCTAGTTTTTT+AGG - Chr2:55827774-55827793 MsG0280009653.01.T01:intron 30.0%
AACGTGAAAGCAAAAGTTCT+TGG - Chr2:55827658-55827677 MsG0280009653.01.T01:intron 35.0%
AAGCTAACCCTCATAGATTT+GGG + Chr2:55830063-55830082 None:intergenic 35.0%
ACAACTACATCTCTCAAAAC+AGG + Chr2:55826380-55826399 None:intergenic 35.0%
ACTCAATCTACTTAAGCAAG+AGG - Chr2:55827221-55827240 MsG0280009653.01.T01:intron 35.0%
AGAGATAACACGAGAAATGT+GGG + Chr2:55828271-55828290 None:intergenic 35.0%
ATCACAAGTGATGATTTAGC+AGG - Chr2:55826149-55826168 MsG0280009653.01.T01:CDS 35.0%
ATGAGTTATTTGAGTCAAGC+TGG + Chr2:55829921-55829940 None:intergenic 35.0%
ATGATTACCATAAGCCCTTA+TGG + Chr2:55828429-55828448 None:intergenic 35.0%
ATGGTTGCAACTGAAATTCT+TGG + Chr2:55831334-55831353 None:intergenic 35.0%
CAAAATGCAAGTGAGAAATG+GGG - Chr2:55826410-55826429 MsG0280009653.01.T01:intron 35.0%
CAATCTAAGGAATTATTGGC+CGG + Chr2:55830473-55830492 None:intergenic 35.0%
CCCATGAAAAAGGTTCATAT+GGG + Chr2:55828570-55828589 None:intergenic 35.0%
GAATTTGATGAGTCAAAGGT+TGG - Chr2:55826209-55826228 MsG0280009653.01.T01:CDS 35.0%
GATCTCCAATCATAAAGGTT+GGG - Chr2:55828589-55828608 MsG0280009653.01.T01:intron 35.0%
TAACATACGTCAAGTGTCTT+TGG + Chr2:55828224-55828243 None:intergenic 35.0%
TCCCATGAAAAAGGTTCATA+TGG + Chr2:55828571-55828590 None:intergenic 35.0%
TGAGTTATTTGAGTCAAGCT+GGG + Chr2:55829920-55829939 None:intergenic 35.0%
TGATTACCATAAGCCCTTAT+GGG + Chr2:55828428-55828447 None:intergenic 35.0%
TGGTTGCAACTGAAATTCTT+GGG + Chr2:55831333-55831352 None:intergenic 35.0%
TGTTCACAATAGAACATACG+TGG + Chr2:55826272-55826291 None:intergenic 35.0%
TTCACAATATCACTGCAAAC+CGG + Chr2:55826674-55826693 None:intergenic 35.0%
! AAAAGTGATGGGACCAATAA+AGG - Chr2:55831393-55831412 MsG0280009653.01.T01:CDS 35.0%
! AATTCGTTGATAAAAACCCC+GGG + Chr2:55828668-55828687 None:intergenic 35.0%
! AGACACACTTGCATTTTTCT+GGG - Chr2:55826616-55826635 MsG0280009653.01.T01:intron 35.0%
! ATTCAGTCGATTGTGCTATT+AGG + Chr2:55829823-55829842 None:intergenic 35.0%
! ATTTCCTTCTTTTTCTTCCC+GGG - Chr2:55828648-55828667 MsG0280009653.01.T01:intron 35.0%
! GAATTCGTTGATAAAAACCC+CGG + Chr2:55828669-55828688 None:intergenic 35.0%
! GAGAGTATGGAAAAAGTGAT+GGG - Chr2:55831382-55831401 MsG0280009653.01.T01:CDS 35.0%
! GTACTTTTGCAAGATCATAC+TGG - Chr2:55826893-55826912 MsG0280009653.01.T01:intron 35.0%
! TGAGAGTATGGAAAAAGTGA+TGG - Chr2:55831381-55831400 MsG0280009653.01.T01:CDS 35.0%
! TTCTCTTCTTTGTGTTGTTG+CGG - Chr2:55827375-55827394 MsG0280009653.01.T01:intron 35.0%
!! ATGGAGATTTGTTTTCTCCA+TGG + Chr2:55829150-55829169 None:intergenic 35.0%
!! CCCATATGAACCTTTTTCAT+GGG - Chr2:55828567-55828586 MsG0280009653.01.T01:intron 35.0%
!! CTTTAAGGTGAAAGCAATCA+AGG + Chr2:55826763-55826782 None:intergenic 35.0%
!! TCCCATATGAACCTTTTTCA+TGG - Chr2:55828566-55828585 MsG0280009653.01.T01:intron 35.0%
!! TTTTAGGAAAACGGAAACAC+AGG - Chr2:55827790-55827809 MsG0280009653.01.T01:intron 35.0%
!!! AACTTTTTTGGTGAGATCAC+GGG + Chr2:55826546-55826565 None:intergenic 35.0%
!!! ATCACTTTTTCCATACTCTC+AGG + Chr2:55831382-55831401 None:intergenic 35.0%
!!! CAACTTTTTTGGTGAGATCA+CGG + Chr2:55826547-55826566 None:intergenic 35.0%
!!! GGATTTAGTTTTCTCCTTTG+TGG + Chr2:55828996-55829015 None:intergenic 35.0%
AAAGCTAGCATCTGAGTGTT+TGG + Chr2:55826867-55826886 None:intergenic 40.0%
AAGAACCTGTTGTATTCTGG+GGG + Chr2:55827504-55827523 None:intergenic 40.0%
ACCAAGACCAATCTACTGAT+TGG - Chr2:55826591-55826610 MsG0280009653.01.T01:intron 40.0%
ACCTATATGAGTGTCAAGTG+GGG + Chr2:55828371-55828390 None:intergenic 40.0%
ACTACAAGAGCTCCATGAAT+GGG + Chr2:55826962-55826981 None:intergenic 40.0%
ACTCGAAAACGACAAGTGAT+GGG + Chr2:55828617-55828636 None:intergenic 40.0%
AGAATACAACAGGTTCTTCC+CGG - Chr2:55827506-55827525 MsG0280009653.01.T01:intron 40.0%
AGACACTTGACGTATGTTAG+AGG - Chr2:55828225-55828244 MsG0280009653.01.T01:intron 40.0%
AGATAACACGAGAAATGTGG+GGG + Chr2:55828269-55828288 None:intergenic 40.0%
ATCCATTCATTGTCGTAGCA+AGG - Chr2:55830403-55830422 MsG0280009653.01.T01:intron 40.0%
ATTCATTGTCGTAGCAAGGA+CGG - Chr2:55830407-55830426 MsG0280009653.01.T01:intron 40.0%
ATTGATGTACCTCCCATTCA+TGG - Chr2:55826947-55826966 MsG0280009653.01.T01:intron 40.0%
ATTTCACCAACAAGATGCCA+AGG - Chr2:55826502-55826521 MsG0280009653.01.T01:intron 40.0%
CACCTATATGAGTGTCAAGT+GGG + Chr2:55828372-55828391 None:intergenic 40.0%
CAGAGATAACACGAGAAATG+TGG + Chr2:55828272-55828291 None:intergenic 40.0%
CATGAACAATCCTATGGATC+TGG + Chr2:55830131-55830150 None:intergenic 40.0%
CATGGGATCTCCAATCATAA+AGG - Chr2:55828584-55828603 MsG0280009653.01.T01:intron 40.0%
CTCTCAAAACAGGATCATCA+TGG + Chr2:55826370-55826389 None:intergenic 40.0%
CTTCTCATTGGCATAACACT+AGG - Chr2:55828495-55828514 MsG0280009653.01.T01:intron 40.0%
GAACATTGGAGATCTTCTAC+AGG - Chr2:55826982-55827001 MsG0280009653.01.T01:intron 40.0%
GAAGAACCTGTTGTATTCTG+GGG + Chr2:55827505-55827524 None:intergenic 40.0%
GAAGCTAACCCTCATAGATT+TGG + Chr2:55830064-55830083 None:intergenic 40.0%
GAGATAACACGAGAAATGTG+GGG + Chr2:55828270-55828289 None:intergenic 40.0%
GATTGGAGATCCCATGAAAA+AGG + Chr2:55828580-55828599 None:intergenic 40.0%
GGAAGAACCTGTTGTATTCT+GGG + Chr2:55827506-55827525 None:intergenic 40.0%
GGATCTCCAATCATAAAGGT+TGG - Chr2:55828588-55828607 MsG0280009653.01.T01:intron 40.0%
GTCCAAGGACTCATAGAAAA+TGG - Chr2:55826233-55826252 MsG0280009653.01.T01:CDS 40.0%
GTTCACTCCCAAATCTATGA+GGG - Chr2:55830053-55830072 MsG0280009653.01.T01:intron 40.0%
GTTTGATGCATCACACTCAA+AGG + Chr2:55828123-55828142 None:intergenic 40.0%
TATCTCTGTGTTGCGCATTT+AGG - Chr2:55828284-55828303 MsG0280009653.01.T01:intron 40.0%
TCACCTATATGAGTGTCAAG+TGG + Chr2:55828373-55828392 None:intergenic 40.0%
TCATCCGCAACAACAATCTA+AGG + Chr2:55830486-55830505 None:intergenic 40.0%
TGCTAGCGTACTTACAATCT+TGG + Chr2:55829386-55829405 None:intergenic 40.0%
TGTCTCTCCAATCAGTAGAT+TGG + Chr2:55826601-55826620 None:intergenic 40.0%
TGTTCACTCCCAAATCTATG+AGG - Chr2:55830052-55830071 MsG0280009653.01.T01:intron 40.0%
TTAAGCAAGAGGTCTGACTT+AGG - Chr2:55827232-55827251 MsG0280009653.01.T01:intron 40.0%
TTGAGTGTGATGCATCAAAC+TGG - Chr2:55828123-55828142 MsG0280009653.01.T01:intron 40.0%
TTTCCATCTTAGAGTTGACG+AGG - Chr2:55827308-55827327 MsG0280009653.01.T01:intron 40.0%
! CTCCATTTTCTATGAGTCCT+TGG + Chr2:55826238-55826257 None:intergenic 40.0%
! GAAGTATCCCTGTATATTGG+TGG + Chr2:55831439-55831458 None:intergenic 40.0%
! GAGACACACTTGCATTTTTC+TGG - Chr2:55826615-55826634 MsG0280009653.01.T01:intron 40.0%
! GTCCCTACAATTGACTTAAC+AGG - Chr2:55826341-55826360 MsG0280009653.01.T01:intron 40.0%
! TTGGCATATCGTTTTGCAAG+CGG - Chr2:55831472-55831491 MsG0280009653.01.T01:five_prime_UTR 40.0%
! TTTCCTTCTTTTTCTTCCCG+GGG - Chr2:55828649-55828668 MsG0280009653.01.T01:intron 40.0%
!! TCCAATCAGTAGATTGGTCT+TGG + Chr2:55826595-55826614 None:intergenic 40.0%
AAACCCCGGGAAGAAAAAGA+AGG + Chr2:55828655-55828674 None:intergenic 45.0%
AAGCGACAACGTATCCACAA+AGG - Chr2:55828979-55828998 MsG0280009653.01.T01:intron 45.0%
ACAATATCACTGCAAACCGG+TGG + Chr2:55826671-55826690 None:intergenic 45.0%
ACAATCATGCACCACCCATA+AGG - Chr2:55828411-55828430 MsG0280009653.01.T01:intron 45.0%
ATCACACTCAAAGGTGACTC+AGG + Chr2:55828114-55828133 None:intergenic 45.0%
CAATCATGCACCACCCATAA+GGG - Chr2:55828412-55828431 MsG0280009653.01.T01:intron 45.0%
CAATTCCCCCAGAATACAAC+AGG - Chr2:55827496-55827515 MsG0280009653.01.T01:intron 45.0%
CACTACAAGAGCTCCATGAA+TGG + Chr2:55826963-55826982 None:intergenic 45.0%
CACTCGAAAACGACAAGTGA+TGG + Chr2:55828618-55828637 None:intergenic 45.0%
CAGCAGCACCCATTTCTTTA+AGG + Chr2:55826778-55826797 None:intergenic 45.0%
GAGTTATTGTCAGAGGCTCT+TGG - Chr2:55826737-55826756 MsG0280009653.01.T01:intron 45.0%
GCAATCAAACATTTCGGCGT+TGG - Chr2:55830187-55830206 MsG0280009653.01.T01:intron 45.0%
GGAGCTCTTGTAGTGAACAT+TGG - Chr2:55826968-55826987 MsG0280009653.01.T01:intron 45.0%
GGGAACCCAACCTTTATGAT+TGG + Chr2:55828597-55828616 None:intergenic 45.0%
GGGAAGAACCTGTTGTATTC+TGG + Chr2:55827507-55827526 None:intergenic 45.0%
GTAGTGCCTATGGTTAACTC+TGG + Chr2:55826845-55826864 None:intergenic 45.0%
GTCCTTGCTACGACAATGAA+TGG + Chr2:55830408-55830427 None:intergenic 45.0%
GTGACTATGTCACTGGACTA+AGG - Chr2:55827454-55827473 MsG0280009653.01.T01:intron 45.0%
TAAAGCCGATGAACTACCAC+CGG - Chr2:55826652-55826671 MsG0280009653.01.T01:intron 45.0%
TGATCACTCACCTGAGAGTA+TGG - Chr2:55831369-55831388 MsG0280009653.01.T01:CDS 45.0%
TGATCATGGCAACGAGAAGT+CGG + Chr2:55830441-55830460 None:intergenic 45.0%
TGATTGTAGCATGCACTGGA+TGG + Chr2:55828398-55828417 None:intergenic 45.0%
TGCATGATTGTAGCATGCAC+TGG + Chr2:55828402-55828421 None:intergenic 45.0%
TTACCATAAGCCCTTATGGG+TGG + Chr2:55828425-55828444 None:intergenic 45.0%
TTTGCAGGCTAATCATCTCC+CGG + Chr2:55827405-55827424 None:intergenic 45.0%
TTTGTGGATACGTTGTCGCT+TGG + Chr2:55828980-55828999 None:intergenic 45.0%
! AGATTGTTGTTGCGGATGAC+CGG - Chr2:55830487-55830506 MsG0280009653.01.T01:intron 45.0%
! CTATGGTTAACTCTGGCTCA+GGG + Chr2:55826838-55826857 None:intergenic 45.0%
! TATCGTTTTGCAAGCGGTCT+TGG - Chr2:55831478-55831497 MsG0280009653.01.T01:five_prime_UTR 45.0%
! TTCTCGTGTCTTGATAGCCT+CGG + Chr2:55827543-55827562 None:intergenic 45.0%
! TTTGTGTTGTTGCGGATGAC+CGG - Chr2:55827383-55827402 MsG0280009653.01.T01:intron 45.0%
!! TGAGTGTTTGGTAGTGCCTA+TGG + Chr2:55826855-55826874 None:intergenic 45.0%
!! TGGCTTTTAAGGGGAAGTAG+CGG + Chr2:55827716-55827735 None:intergenic 45.0%
!! TTCATCGGCTTTAGGAGGAT+GGG + Chr2:55826645-55826664 None:intergenic 45.0%
!!! CATCACTTGTCGTTTTCGAG+TGG - Chr2:55828616-55828635 MsG0280009653.01.T01:intron 45.0%
!!! AATAAATATTATTTTTTGTT+TGG + Chr2:55829495-55829514 None:intergenic 5.0%
!!! AATAAATCTATTTATTTTAT+TGG - Chr2:55828832-55828851 MsG0280009653.01.T01:intron 5.0%
!!! TAATTAAATTTTAAATTTGA+GGG + Chr2:55828472-55828491 None:intergenic 5.0%
ACAAGAGCTCCATGAATGGG+AGG + Chr2:55826959-55826978 None:intergenic 50.0%
ACAAGATGCCAAGGTGAGGA+AGG - Chr2:55826511-55826530 MsG0280009653.01.T01:intron 50.0%
ACCAACAAGATGCCAAGGTG+AGG - Chr2:55826507-55826526 MsG0280009653.01.T01:intron 50.0%
AGCCTCGGTATGATTATCGC+CGG + Chr2:55827528-55827547 None:intergenic 50.0%
ATCATGGCAACGAGAAGTCG+GGG + Chr2:55830439-55830458 None:intergenic 50.0%
ATGAAAACCAGACACGCGCA+CGG + Chr2:55828310-55828329 None:intergenic 50.0%
CAGTGACAACACTCTCACCA+TGG - Chr2:55829130-55829149 MsG0280009653.01.T01:intron 50.0%
CCTGAGCCAGAGTTAACCAT+AGG - Chr2:55826836-55826855 MsG0280009653.01.T01:intron 50.0%
GATCATGGCAACGAGAAGTC+GGG + Chr2:55830440-55830459 None:intergenic 50.0%
GCAAACCGGTGGTAGTTCAT+CGG + Chr2:55826660-55826679 None:intergenic 50.0%
GCCATGATCACAATCGTCTC+CGG - Chr2:55830451-55830470 MsG0280009653.01.T01:intron 50.0%
GCCCCACTTGACACTCATAT+AGG - Chr2:55828367-55828386 MsG0280009653.01.T01:intron 50.0%
GTAGTACTCCTTCCTCACCT+TGG + Chr2:55826522-55826541 None:intergenic 50.0%
GTGGGGCATGAACAATCCTA+TGG + Chr2:55830137-55830156 None:intergenic 50.0%
TCCTCACCTTGGCATCTTGT+TGG + Chr2:55826511-55826530 None:intergenic 50.0%
! AGAGTATGTACCTGGCTCGT+GGG - Chr2:55830330-55830349 MsG0280009653.01.T01:intron 50.0%
! CCTATGGTTAACTCTGGCTC+AGG + Chr2:55826839-55826858 None:intergenic 50.0%
! GATTGTTGTTGCGGATGACC+GGG - Chr2:55830488-55830507 MsG0280009653.01.T01:intron 50.0%
! GCTCCTCGTCAACTCTAAGA+TGG + Chr2:55827314-55827333 None:intergenic 50.0%
! TAGAGTATGTACCTGGCTCG+TGG - Chr2:55830329-55830348 MsG0280009653.01.T01:intron 50.0%
! TTGTGTTGTTGCGGATGACC+GGG - Chr2:55827384-55827403 MsG0280009653.01.T01:intron 50.0%
!! CAACATGTGGTTGGTTCGAG+TGG - Chr2:55827192-55827211 MsG0280009653.01.T01:intron 50.0%
!! GAGTCAAAGGTTGGTGTCCA+AGG - Chr2:55826218-55826237 MsG0280009653.01.T01:CDS 50.0%
!! GGTAGTTCATCGGCTTTAGG+AGG + Chr2:55826650-55826669 None:intergenic 50.0%
!! GGTGGTAGTTCATCGGCTTT+AGG + Chr2:55826653-55826672 None:intergenic 50.0%
!! GTTCATCGGCTTTAGGAGGA+TGG + Chr2:55826646-55826665 None:intergenic 50.0%
!! TCATCGGCTTTAGGAGGATG+GGG + Chr2:55826644-55826663 None:intergenic 50.0%
CAGTGACATAGTCACGCCTC+AGG + Chr2:55827449-55827468 None:intergenic 55.0%
CTGAGGCGTGACTATGTCAC+TGG - Chr2:55827447-55827466 MsG0280009653.01.T01:intron 55.0%
CTTAAACCTACCCACGAGCC+AGG + Chr2:55830343-55830362 None:intergenic 55.0%
GCACCACCCATAAGGGCTTA+TGG - Chr2:55828419-55828438 MsG0280009653.01.T01:intron 55.0%
GCCGGAGACGATTGTGATCA+TGG + Chr2:55830455-55830474 None:intergenic 55.0%
GCCTCGGTATGATTATCGCC+GGG + Chr2:55827527-55827546 None:intergenic 55.0%
GGGGGAATTGCGCAATCTTG+CGG + Chr2:55827486-55827505 None:intergenic 55.0%
TCCCGGCGATAATCATACCG+AGG - Chr2:55827523-55827542 MsG0280009653.01.T01:intron 55.0%
! GTTAACTCTGGCTCAGGGCA+TGG + Chr2:55826833-55826852 None:intergenic 55.0%
! TATGTACCTGGCTCGTGGGT+AGG - Chr2:55830334-55830353 MsG0280009653.01.T01:intron 55.0%
ATTTAGGCCGTGCGCGTGTC+TGG - Chr2:55828300-55828319 MsG0280009653.01.T01:intron 60.0%
! AACTCTGGCTCAGGGCATGG+TGG + Chr2:55826830-55826849 None:intergenic 60.0%
! GGGGGTGTGATGCGAGTGAT+AGG + Chr2:55828251-55828270 None:intergenic 60.0%
!! AGTGCTCTAGAGACCCGCCA+CGG - Chr2:55828331-55828350 MsG0280009653.01.T01:intron 60.0%
CCGCCACGGTCTCATGCAAG+CGG - Chr2:55828345-55828364 MsG0280009653.01.T01:intron 65.0%
CCGCTTGCATGAGACCGTGG+CGG + Chr2:55828348-55828367 None:intergenic 65.0%
CGCTTGCATGAGACCGTGGC+GGG + Chr2:55828347-55828366 None:intergenic 65.0%
GGGCCGCTTGCATGAGACCG+TGG + Chr2:55828351-55828370 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr2 gene 55826041 55831549 55826041 ID=MsG0280009653.01;Name=MsG0280009653.01
Chr2 mRNA 55826041 55831549 55826041 ID=MsG0280009653.01.T01;Parent=MsG0280009653.01;Name=MsG0280009653.01.T01;_AED=0.49;_eAED=0.49;_QI=96|1|0.5|1|1|1|2|0|381
Chr2 exon 55830587 55831549 55830587 ID=MsG0280009653.01.T01:exon:5889;Parent=MsG0280009653.01.T01
Chr2 exon 55826041 55826319 55826041 ID=MsG0280009653.01.T01:exon:5890;Parent=MsG0280009653.01.T01
Chr2 five_prime_UTR 55831454 55831549 55831454 ID=MsG0280009653.01.T01:five_prime_utr;Parent=MsG0280009653.01.T01
Chr2 CDS 55830587 55831453 55830587 ID=MsG0280009653.01.T01:cds;Parent=MsG0280009653.01.T01
Chr2 CDS 55826041 55826319 55826041 ID=MsG0280009653.01.T01:cds;Parent=MsG0280009653.01.T01
Gene Sequence

>MsG0280009653.01.T01

ATGATGGCCACAATCACAAGTGATGATTTAGCAGGAAATGCTGAAATTTATGACAGAAAAAGTGAACTAAAGGAATTTGATGAGTCAAAGGTTGGTGTCCAAGGACTCATAGAAAATGGAGTAACAAAAGTTCCACGTATGTTCTATTGTGAACAATCTAATATCAATCATGGTTCGGTCAATGAATCAAATTCAAAGCTTAGTGTCCCTACAATTGACTTAACAGGAATCCATGATGATCCTGTTTTGAGAGATGTAGTTGTAAGAAAAGTTCAAAATGCAAGTGAGAAATGGGGATTCTTTCAAGTAATAAATCATGGAATTCCAACACAAATTTTGGATGAGATGATCAAAGGAACTAGTAGATTTCACCAACAAGATGCCAAGGTGAGGAAGGAGTACTACACCCGTGATCTCACCAAAAAAGTTGTTTATCTTTCCAATTTTACTCTTTACCAAGACCAATCTACTGATTGGAGAGACACACTTGCATTTTTCTGGGCACCCCATCCTCCTAAAGCCGATGAACTACCACCGGTTTGCAGTGATATTGTGAATGAATACACAAAAGAAGTAATGGAACTTGGATCTTCTTTGTATGAGTTATTGTCAGAGGCTCTTGGCCTTGATTGCTTTCACCTTAAAGAAATGGGTGCTGCTGAAAGTTTTGTACATATGTGTCATTATTATCCACCATGCCCTGAGCCAGAGTTAACCATAGGCACTACCAAACACTCAGATGCTAGCTTTATTACAGTACTTTTGCAAGATCATACTGGTGACTTACAAATTCTTCATGACAATCAGTGGATTGATGTACCTCCCATTCATGGAGCTCTTGTAGTGAACATTGGAGATCTTCTACAGCTTGTGAGTAATGACAAGTTCACAAGTGTTCAACACAGAGTTTTAGCAAAAAGTGTAGGCCCAAGAATTTCAGTTGCAACCATTTTTAGAACACAACATGATCACTCACCTGAGAGTATGGAAAAAGTGATGGGACCAATAAAGGAACTGTTATCTAAAGAAAATCCACCAATATACAGGGATACTTCTTTGAAAGAGTATTTGGCATATCGTTTTGCAAGCGGTCTTGGAGCTTCTGCACTATCACCCTTCAAGTTGTTACATAAAGAAGCAACTTAG
Protein sequence

>MsG0280009653.01.T01

MMATITSDDLAGNAEIYDRKSELKEFDESKVGVQGLIENGVTKVPRMFYCEQSNINHGSVNESNSKLSVPTIDLTGIHDDPVLRDVVVRKVQNASEKWGFFQVINHGIPTQILDEMIKGTSRFHQQDAKVRKEYYTRDLTKKVVYLSNFTLYQDQSTDWRDTLAFFWAPHPPKADELPPVCSDIVNEYTKEVMELGSSLYELLSEALGLDCFHLKEMGAAESFVHMCHYYPPCPEPELTIGTTKHSDASFITVLLQDHTGDLQILHDNQWIDVPPIHGALVVNIGDLLQLVSNDKFTSVQHRVLAKSVGPRISVATIFRTQHDHSPESMEKVMGPIKELLSKENPPIYRDTSLKEYLAYRFASGLGASALSPFKLLHKEAT*