AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280009655.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280009655.01.T01 MTR_2g069310 96.085 843 5 1 1 815 1 843 0.0 1680
MsG0280009655.01.T01 MTR_2g069050 96.085 843 5 1 1 815 1 843 0.0 1679
MsG0280009655.01.T01 MTR_1g048000 94.425 843 19 1 1 815 1 843 0.0 1660
MsG0280009655.01.T01 MTR_2g069320 83.393 843 112 1 1 815 1 843 0.0 1467
MsG0280009655.01.T01 MTR_4g116430 37.828 838 456 11 20 806 140 963 0.0 588
MsG0280009655.01.T01 MTR_4g119340 28.248 1016 479 27 16 801 11 1006 9.95e-119 384
MsG0280009655.01.T01 MTR_7g009740 39.474 152 84 3 19 167 67 213 1.26e-21 100
MsG0280009655.01.T01 MTR_4g101750 25.577 477 261 16 304 765 353 750 1.29e-20 97.8
MsG0280009655.01.T01 MTR_4g101750 35.338 133 67 3 5 135 79 194 6.75e-11 66.6
MsG0280009655.01.T01 MTR_3g101820 93.617 47 3 0 444 490 19 65 1.99e-20 86.7
MsG0280009655.01.T01 MTR_3g097250 43.590 117 53 2 18 134 82 185 3.00e-19 93.2
MsG0280009655.01.T01 MTR_1g052535 36.434 129 65 2 6 134 70 181 6.20e-17 85.1
MsG0280009655.01.T01 MTR_1g052535 36.434 129 65 2 6 134 70 181 1.19e-16 84.7
MsG0280009655.01.T01 MTR_4g101750 25.056 447 242 15 304 735 353 721 1.62e-16 84.7
MsG0280009655.01.T01 MTR_4g101750 35.338 133 67 3 5 135 79 194 6.58e-11 66.6
MsG0280009655.01.T01 MTR_4g079360 39.496 119 50 4 17 134 55 152 2.82e-13 73.9
MsG0280009655.01.T01 MTR_7g044770 39.837 123 51 4 19 135 62 167 3.99e-13 73.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280009655.01.T01 AT1G56070 89.917 843 57 1 1 815 1 843 0.0 1588
MsG0280009655.01.T01 AT1G56070 89.917 843 57 1 1 815 1 843 0.0 1588
MsG0280009655.01.T01 AT1G56070 89.917 843 57 1 1 815 1 843 0.0 1588
MsG0280009655.01.T01 AT3G12915 80.902 843 78 5 1 815 1 788 0.0 1385
MsG0280009655.01.T01 AT1G06220 36.675 848 472 12 19 815 138 971 0.0 571
MsG0280009655.01.T01 AT1G06220 36.675 848 472 12 19 815 138 971 0.0 571
MsG0280009655.01.T01 AT1G06220 36.675 848 472 12 19 815 138 971 0.0 571
MsG0280009655.01.T01 AT5G25230 36.246 847 477 10 19 815 124 957 0.0 561
MsG0280009655.01.T01 AT5G25230 36.246 847 477 10 19 815 124 957 0.0 561
MsG0280009655.01.T01 AT3G22980 29.307 1010 464 28 19 801 9 995 8.02e-125 400
MsG0280009655.01.T01 AT3G22980 29.307 1010 464 28 19 801 9 995 8.02e-125 400
MsG0280009655.01.T01 AT3G22980 29.307 1010 464 28 19 801 9 995 8.02e-125 400
MsG0280009655.01.T01 AT1G62750 26.022 465 274 15 304 765 357 754 6.05e-22 102
MsG0280009655.01.T01 AT5G39900 38.255 149 84 2 19 167 66 206 1.03e-20 97.8
MsG0280009655.01.T01 AT5G13650 38.400 125 61 1 10 134 73 181 2.72e-19 93.6
MsG0280009655.01.T01 AT5G13650 38.400 125 61 1 10 134 74 182 2.82e-19 93.2
MsG0280009655.01.T01 AT1G45332 23.077 481 266 18 304 765 148 543 4.29e-18 89.4
MsG0280009655.01.T01 AT5G08650 42.735 117 54 2 18 134 85 188 4.52e-18 89.4
MsG0280009655.01.T01 AT5G08650 43.590 117 53 2 18 134 85 188 4.71e-18 89.4
MsG0280009655.01.T01 AT2G45030 23.077 481 266 18 304 765 328 723 5.21e-18 89.4
MsG0280009655.01.T01 AT2G45030 36.585 123 55 4 19 135 65 170 6.99e-12 69.7
MsG0280009655.01.T01 AT1G45332 23.077 481 266 18 304 765 328 723 5.44e-18 89.4
MsG0280009655.01.T01 AT1G45332 36.585 123 55 4 19 135 65 170 6.53e-12 69.7
MsG0280009655.01.T01 AT2G31060 37.815 119 52 3 17 134 57 154 1.06e-13 75.5
MsG0280009655.01.T01 AT2G31060 37.815 119 56 3 17 134 57 158 5.50e-12 70.1

Find 239 sgRNAs with CRISPR-Local

Find 321 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGTTTGAAGGTCAGAATTA+TGG 0.222732 2:+55851604 MsG0280009655.01.T01:CDS
ATTTGTCAATGTAGCATTCT+TGG 0.226304 2:-55851774 None:intergenic
TTCTCCCCAGGGACAAAATT+TGG 0.227493 2:-55851629 None:intergenic
GTTCTTGGTGGTCCATTTCT+TGG 0.265228 2:-55851150 None:intergenic
GTGTTCAGAGAACTGTTATT+TGG 0.270470 2:+55851672 MsG0280009655.01.T01:CDS
CTTCCTGTCATTGAGTCCTT+TGG 0.273842 2:+55852706 MsG0280009655.01.T01:CDS
CTCTGCTGGTTTGCACGGTT+GGG 0.286467 2:+55851022 MsG0280009655.01.T01:CDS
GTGTTAATGACCTGCTTAAT+AGG 0.295117 2:-55851221 None:intergenic
GCCAAGAAAATCTGGTGTTT+TGG 0.299094 2:+55852280 MsG0280009655.01.T01:CDS
TGATGAGTTGCGTCGTATTA+TGG 0.307304 2:+55849611 MsG0280009655.01.T01:CDS
CAAAGATGATGGAGAGGCTT+TGG 0.317773 2:+55851102 MsG0280009655.01.T01:CDS
CTGATGTTGCGGCCCTCAAC+TGG 0.321497 2:-55852738 None:intergenic
ATGATTCCCGCTTCTGATAA+AGG 0.326143 2:+55851536 MsG0280009655.01.T01:CDS
AAGATGTATGCCTCTAAATT+TGG 0.328168 2:+55851068 MsG0280009655.01.T01:CDS
CAAGATCTTAGAACGATTCT+TGG 0.331449 2:-55852227 None:intergenic
CCTTGATTTCATTCAAGTAT+TGG 0.334928 2:-55852351 None:intergenic
TCTCTGCTGGTTTGCACGGT+TGG 0.337608 2:+55851021 MsG0280009655.01.T01:CDS
TCAAGAAGTGCAGTGCTTGC+TGG 0.343152 2:-55851368 None:intergenic
CAGTTGAGGGCCGCAACATC+AGG 0.346803 2:+55852739 MsG0280009655.01.T01:CDS
AAAGATGATGGAGAGGCTTT+GGG 0.347711 2:+55851103 MsG0280009655.01.T01:CDS
GAAAATTTCATAGCACGAAT+AGG 0.347893 2:-55851818 None:intergenic
TAAAGCATGAGAGGTCCTTC+AGG 0.357751 2:-55851503 None:intergenic
GTGGTCCATTTCTTGGTGGC+AGG 0.368334 2:-55851143 None:intergenic
CACAGTCGCTATGGTTGGTT+TGG 0.369065 2:+55851739 MsG0280009655.01.T01:CDS
GGTTTGAAGGTCAGAATTAT+GGG 0.370077 2:+55851605 MsG0280009655.01.T01:CDS
CTCAGTGTGTGTTTGATCAC+TGG 0.371487 2:+55852773 MsG0280009655.01.T01:CDS
GTGGTGGTGGATTGTGTTGA+GGG 0.373446 2:+55850770 MsG0280009655.01.T01:CDS
CAGATGCTTCCTTGAGCTCC+AGG 0.374710 2:+55850872 MsG0280009655.01.T01:intron
GATTCCCTTGTTGCTGCCGC+TGG 0.379217 2:+55850500 MsG0280009655.01.T01:CDS
ATCAGAGGAAAAGGACTTGA+TGG 0.385826 2:+55851307 MsG0280009655.01.T01:CDS
TACAATCTGTTGTGCTTGTT+GGG 0.386039 2:-55852130 None:intergenic
GTAAACAGGTTCAAGAAGTC+TGG 0.388286 2:-55852557 None:intergenic
GGCATACATCTTTGCAAAGT+TGG 0.389166 2:-55851057 None:intergenic
ACTTTAAAGACTATTCAAAA+TGG 0.393360 2:+55849479 MsG0280009655.01.T01:exon
CTCGTCAACACCAAATTTAG+AGG 0.393467 2:-55851078 None:intergenic
TTCCTTGAGCTCCAGGTTGA+TGG 0.393631 2:+55850879 MsG0280009655.01.T01:CDS
ATCAAGGATTCCGTGGTTGC+TGG 0.395800 2:+55852367 MsG0280009655.01.T01:CDS
TGGATTTCCACCATGTAAAC+AGG 0.397116 2:-55852571 None:intergenic
AGGATCTTGCCAAGAAAATC+TGG 0.397634 2:+55852272 MsG0280009655.01.T01:CDS
GTACAATCTGTTGTGCTTGT+TGG 0.399465 2:-55852131 None:intergenic
AAGATCTTGTCCGAACAGTA+TGG 0.399948 2:+55852241 MsG0280009655.01.T01:CDS
TTGATCCTGCCACCAAGAAA+TGG 0.401053 2:+55851138 MsG0280009655.01.T01:CDS
GTCTCTCTGAAGGACACAAC+AGG 0.403756 2:-55852067 None:intergenic
GATCTGTTTGAAGGATTTGC+AGG 0.404040 2:+55852006 MsG0280009655.01.T01:CDS
GTTTGTACCATTGAGGAGTC+TGG 0.404218 2:+55851944 MsG0280009655.01.T01:CDS
AAGATCTTAGAACGATTCTT+GGG 0.404757 2:-55852226 None:intergenic
TAAAGTTTCAACTGGTTTGA+AGG 0.404880 2:+55851592 MsG0280009655.01.T01:CDS
ATGTTGGGCCCGGTGGTCTC+AGG 0.405338 2:-55852304 None:intergenic
GCCCTTCCTCTTGCGAATAT+CGG 0.410239 2:-55852851 None:intergenic
TCATCTTGAGATCTGTTTGA+AGG 0.410842 2:+55851997 MsG0280009655.01.T01:CDS
GGAACCGTTGCTTTCTCTGC+TGG 0.411377 2:+55851008 MsG0280009655.01.T01:CDS
AAAGCAACGGTTCCTTTCTC+AGG 0.412083 2:-55850999 None:intergenic
CGATACCTCTGAGCTGTAGA+TGG 0.417008 2:-55851416 None:intergenic
AAAATTTCATAGCACGAATA+GGG 0.417338 2:-55851817 None:intergenic
TTTCTTTCCTGCGGCTGTGA+AGG 0.417504 2:+55848457 MsG0280009655.01.T01:five_prime_UTR
CAAGAGCTTGCTCAGGAGCT+TGG 0.418120 2:-55852591 None:intergenic
TCCTATTGTGCCCTCATCAA+TGG 0.419375 2:-55852191 None:intergenic
ATTATTGCGCAAGAGGTTGC+TGG 0.424559 2:+55850524 MsG0280009655.01.T01:CDS
GATTCTCTCTTCTTTCTCTT+CGG 0.425845 2:+55848514 MsG0280009655.01.T01:five_prime_UTR
GATCTTCCTAAGCTTGTTGA+AGG 0.426334 2:+55851887 MsG0280009655.01.T01:CDS
AGTAGCTGAACCAGTGTTCT+TGG 0.430286 2:-55851165 None:intergenic
GCCATTGATGAGGGCACAAT+AGG 0.431150 2:+55852190 MsG0280009655.01.T01:CDS
CACATATCAACCACCATGTT+GGG 0.432084 2:-55852319 None:intergenic
GGATTTGCAGGATGATTTCA+TGG 0.433382 2:+55852018 MsG0280009655.01.T01:CDS
ATTAATCTTATTGATTCCCC+TGG 0.433729 2:+55850689 MsG0280009655.01.T01:CDS
CAAGAAGTGCAGTGCTTGCT+GGG 0.435961 2:-55851367 None:intergenic
TGGATTCTCCAGCCAGTTGA+GGG 0.437780 2:+55852726 MsG0280009655.01.T01:CDS
TCGTGTTGAGAATTTGTATG+AGG 0.438674 2:+55851436 MsG0280009655.01.T01:CDS
TTCTTTCCTGCGGCTGTGAA+GGG 0.444436 2:+55848458 MsG0280009655.01.T01:five_prime_UTR
CACCATGAAATCAGAGGAAA+AGG 0.446522 2:+55851298 MsG0280009655.01.T01:CDS
CGATTCTTGGGGTCATCCCT+TGG 0.448562 2:-55852214 None:intergenic
GATGAGAAGTCGACGTGCCC+AGG 0.452331 2:-55850707 None:intergenic
ACTTCTTGAACCTGTTTACA+TGG 0.457137 2:+55852561 MsG0280009655.01.T01:CDS
TTGAGACCTTCAACAAGCTT+AGG 0.465806 2:-55851893 None:intergenic
CCAATACTTGAATGAAATCA+AGG 0.470676 2:+55852351 MsG0280009655.01.T01:CDS
TCGCAAGAGGAAGGGCTTGA+AGG 0.471559 2:+55852858 MsG0280009655.01.T01:CDS
AAGGAGTGTTGAGGAAGAAG+AGG 0.471645 2:-55848485 None:intergenic
CAGAGAACTGTTATTTGGAT+GGG 0.472670 2:+55851677 MsG0280009655.01.T01:CDS
TCTAACAAACTCCTTCTTTG+TGG 0.474459 2:+55849456 MsG0280009655.01.T01:five_prime_UTR
TACAAATCTTTCTTCTCCCC+AGG 0.474730 2:-55851641 None:intergenic
AACCTTCCTTTATCAGAAGC+GGG 0.475056 2:-55851542 None:intergenic
AGGTTCAAGAAGTCTGGGTT+TGG 0.477724 2:-55852551 None:intergenic
CAAGCTCCTGAGCAAGCTCT+TGG 0.480687 2:+55852592 MsG0280009655.01.T01:CDS
TGTTGCGGCCCTCAACTGGC+TGG 0.484331 2:-55852734 None:intergenic
ACAATTCAGTTACTCACTCT+AGG 0.484664 2:+55848431 MsG0280009655.01.T01:five_prime_UTR
CTCCATCAACCTGGAGCTCA+AGG 0.484716 2:-55850881 None:intergenic
CGCTGGAATTATTGCGCAAG+AGG 0.485833 2:+55850517 MsG0280009655.01.T01:CDS
TTGGATTCTCCAGCCAGTTG+AGG 0.488915 2:+55852725 MsG0280009655.01.T01:CDS
GTCATTGCTCACGTCGATCA+TGG 0.491356 2:+55849663 MsG0280009655.01.T01:CDS
CAATTCAGTTACTCACTCTA+GGG 0.493509 2:+55848432 MsG0280009655.01.T01:five_prime_UTR
TCAGAGAACTGTTATTTGGA+TGG 0.493880 2:+55851676 MsG0280009655.01.T01:CDS
TCTGGAGAACACATTGTTGC+TGG 0.495917 2:+55851962 MsG0280009655.01.T01:CDS
GCTTTCTCTGCTGGTTTGCA+CGG 0.496228 2:+55851017 MsG0280009655.01.T01:CDS
TATGATGTCATCAGATCCAT+TGG 0.496991 2:+55852798 MsG0280009655.01.T01:CDS
TGGCCGATGTTGACAAAGCT+AGG 0.497965 2:+55851272 MsG0280009655.01.T01:CDS
TCTTGCTAAGTCAGATCCTA+TGG 0.502729 2:+55851919 MsG0280009655.01.T01:CDS
CATGGTGGTTGATATGTGTA+AGG 0.508997 2:+55852324 MsG0280009655.01.T01:CDS
ATCAACCACCATGTTGGGCC+CGG 0.509336 2:-55852314 None:intergenic
CTGTTATGAGCCTATTAAGC+AGG 0.509923 2:+55851211 MsG0280009655.01.T01:CDS
TATGGTTGTTTGTACCATTG+AGG 0.510700 2:+55851937 MsG0280009655.01.T01:CDS
TGAACAGCAACACGCACAAC+AGG 0.510917 2:-55851848 None:intergenic
GTCTTTAAAGTCCACAAAGA+AGG 0.511779 2:-55849467 None:intergenic
GAAGCTAGACCGTTGGAGGA+TGG 0.513136 2:+55852157 MsG0280009655.01.T01:CDS
TGCATGACACGTTTCATCAA+AGG 0.514712 2:-55851335 None:intergenic
CTTGTCCGAACAGTATGGTT+GGG 0.522890 2:+55852246 MsG0280009655.01.T01:CDS
CAAGCACAACAGATTGTACA+TGG 0.523093 2:+55852135 MsG0280009655.01.T01:CDS
AGTGGTGGTGGATTGTGTTG+AGG 0.524922 2:+55850769 MsG0280009655.01.T01:CDS
CAGTAGCATATTGATCATCA+AGG 0.525255 2:-55851463 None:intergenic
CTTGCAGAGGCCATTGATGA+GGG 0.525668 2:+55852181 MsG0280009655.01.T01:CDS
GAGGGCCGCAACATCAGGGC+AGG 0.529545 2:+55852744 MsG0280009655.01.T01:CDS
TAAACAGGTTCAAGAAGTCT+GGG 0.532926 2:-55852556 None:intergenic
GGTTCAGCTACTTGCAAGCG+TGG 0.533110 2:+55851176 MsG0280009655.01.T01:CDS
AAGCTAGACCGTTGGAGGAT+GGG 0.533264 2:+55852158 MsG0280009655.01.T01:CDS
GCGTGTTGCTGTTCAGTGCA+AGG 0.535855 2:+55851856 MsG0280009655.01.T01:CDS
CTTGGTGGTCCATTTCTTGG+TGG 0.536035 2:-55851147 None:intergenic
GAACACATTGTTGCTGGTGC+AGG 0.536052 2:+55851968 MsG0280009655.01.T01:CDS
AAACCTTCCTTTATCAGAAG+CGG 0.536092 2:-55851543 None:intergenic
CTTGTCCCAACCATACTGTT+CGG 0.536466 2:-55852251 None:intergenic
GTTCAAGTGTATCCTGAGAA+AGG 0.538260 2:+55850987 MsG0280009655.01.T01:CDS
TTCCAGTGGGCATCAAAAGA+AGG 0.538881 2:+55852391 MsG0280009655.01.T01:CDS
ATGAGAAGTCGACGTGCCCA+GGG 0.539352 2:-55850706 None:intergenic
TCAGTGTGTGTTTGATCACT+GGG 0.540539 2:+55852774 MsG0280009655.01.T01:CDS
TATGCTTTGATGTTGTAAAG+TGG 0.541891 2:-55852682 None:intergenic
ATGTTGTAAAGTGGAGTACC+AGG 0.543082 2:-55852673 None:intergenic
ACACATATCAACCACCATGT+TGG 0.545736 2:-55852320 None:intergenic
CTCTGAGCTGTAGATGGAGA+GGG 0.546475 2:-55851410 None:intergenic
TGAGAATGCTAATGTGATCA+TGG 0.547006 2:+55850935 MsG0280009655.01.T01:CDS
TTAATCTTATTGATTCCCCT+GGG 0.548229 2:+55850690 MsG0280009655.01.T01:CDS
AAAGCATGAGAGGTCCTTCA+GGG 0.548432 2:-55851502 None:intergenic
GCTCCTGAGCAAGCTCTTGG+TGG 0.549556 2:+55852595 MsG0280009655.01.T01:CDS
TTGCAGGATGATTTCATGGG+TGG 0.550585 2:+55852022 MsG0280009655.01.T01:CDS
TCATCAGATCCATTGGAGGC+TGG 0.551374 2:+55852805 MsG0280009655.01.T01:CDS
TAATTCCAGCGGCAGCAACA+AGG 0.551453 2:-55850505 None:intergenic
CCGTGGTTGCTGGATTCCAG+TGG 0.552245 2:+55852377 MsG0280009655.01.T01:CDS
TTTGAAGAAATGCAGAGGCC+TGG 0.554342 2:+55852655 MsG0280009655.01.T01:CDS
GCTTGTGATCCAGCCTCCAA+TGG 0.555847 2:-55852814 None:intergenic
TGGTGGTGGATTGTGTTGAG+GGG 0.556767 2:+55850771 MsG0280009655.01.T01:CDS
TCTGCAAGCCCATCCTCCAA+CGG 0.557137 2:-55852166 None:intergenic
CACGTTCAGCTTCATCAGCA+CGG 0.558462 2:-55850568 None:intergenic
CATGGAAGCTAGACCGTTGG+AGG 0.559366 2:+55852153 MsG0280009655.01.T01:CDS
GAAGAGAAAGAAGAGAGAAT+CGG 0.559648 2:-55848512 None:intergenic
GACCGATATTCGCAAGAGGA+AGG 0.561820 2:+55852849 MsG0280009655.01.T01:CDS
AGAAGAGAGAATCGGCGAGA+AGG 0.562625 2:-55848504 None:intergenic
TTCCCGCTTCTGATAAAGGA+AGG 0.564010 2:+55851540 MsG0280009655.01.T01:CDS
AATCCAAAGGACTCAATGAC+AGG 0.564068 2:-55852709 None:intergenic
GCTGCACTTCGAATTACTGA+TGG 0.565548 2:+55850740 MsG0280009655.01.T01:CDS
GTGTTCTCCAGACTCCTCAA+TGG 0.567155 2:-55851951 None:intergenic
TCTTGTCCGAACAGTATGGT+TGG 0.569952 2:+55852245 MsG0280009655.01.T01:CDS
AGTAGCATATTGATCATCAA+GGG 0.572303 2:-55851462 None:intergenic
CACTTGTATGAATGATCAGA+AGG 0.573672 2:+55851241 MsG0280009655.01.T01:CDS
TCAGAGGAAAAGGACTTGAT+GGG 0.576860 2:+55851308 MsG0280009655.01.T01:CDS
TTGTGGTAACACAGTCGCTA+TGG 0.577802 2:+55851730 MsG0280009655.01.T01:CDS
CGTGGTTGCTGGATTCCAGT+GGG 0.577990 2:+55852378 MsG0280009655.01.T01:CDS
TGATGGAGCACTAGTGGTGG+TGG 0.578509 2:+55850757 MsG0280009655.01.T01:CDS
GAATGCCTGCCCTGATGTTG+CGG 0.578889 2:-55852749 None:intergenic
GGTAACACAGTCGCTATGGT+TGG 0.579817 2:+55851734 MsG0280009655.01.T01:CDS
GATTTGCAGGATGATTTCAT+GGG 0.581696 2:+55852019 MsG0280009655.01.T01:CDS
ATACCACCAAGAGCTTGCTC+AGG 0.582185 2:-55852598 None:intergenic
AGCTGAACCAGTGTTCTTGG+TGG 0.584488 2:-55851162 None:intergenic
TGCTACATTGACAAATGAGA+AGG 0.584546 2:+55851781 MsG0280009655.01.T01:CDS
GCTTGCAGAGGCCATTGATG+AGG 0.585873 2:+55852180 MsG0280009655.01.T01:CDS
AAGCCTCCTCTCCATCAACC+TGG 0.586559 2:-55850890 None:intergenic
ACCGATATTCGCAAGAGGAA+GGG 0.586677 2:+55852850 MsG0280009655.01.T01:CDS
AGTTGAGGGCCGCAACATCA+GGG 0.589707 2:+55852740 MsG0280009655.01.T01:CDS
AATTCCAGCGGCAGCAACAA+GGG 0.590214 2:-55850504 None:intergenic
CCTCTGAGCTGTAGATGGAG+AGG 0.591651 2:-55851411 None:intergenic
ACGTTCAGCTTCATCAGCAC+GGG 0.591789 2:-55850567 None:intergenic
ATCCCTAGCTTTGTCAACAT+CGG 0.591971 2:-55851275 None:intergenic
GTTCAGCTACTTGCAAGCGT+GGG 0.594481 2:+55851177 MsG0280009655.01.T01:CDS
CGAACAGTATGGTTGGGACA+AGG 0.595072 2:+55852252 MsG0280009655.01.T01:CDS
ATCACATACTTCAAAGCAGA+TGG 0.595334 2:-55852440 None:intergenic
AATTACTGATGGAGCACTAG+TGG 0.597933 2:+55850751 MsG0280009655.01.T01:CDS
CGTGTTGAGAATTTGTATGA+GGG 0.598437 2:+55851437 MsG0280009655.01.T01:CDS
TCAATGGTACAAACAACCAT+AGG 0.599704 2:-55851935 None:intergenic
CAAAGGACTCAATGACAGGA+AGG 0.599886 2:-55852705 None:intergenic
GATGCTATTCACAGAGGAGG+TGG 0.602589 2:+55852478 MsG0280009655.01.T01:CDS
TGAGCTCCAGGTTGATGGAG+AGG 0.602836 2:+55850884 MsG0280009655.01.T01:CDS
ACTTGAACATCACCGAGCAA+TGG 0.603545 2:-55850972 None:intergenic
AAGATGATGGAGAGGCTTTG+GGG 0.604113 2:+55851104 MsG0280009655.01.T01:CDS
GGTATCACTATCAAGTCCAC+TGG 0.604230 2:+55850590 MsG0280009655.01.T01:CDS
TAGAAGACTCTCCTAGCAGT+AGG 0.608055 2:-55852511 None:intergenic
CTCTAGAACAGTCTCTCTGA+AGG 0.609943 2:-55852077 None:intergenic
AAATGGACCACCAAGAACAC+TGG 0.609990 2:+55851155 MsG0280009655.01.T01:CDS
GGCCGATGTTGACAAAGCTA+GGG 0.611665 2:+55851273 MsG0280009655.01.T01:CDS
GAATGAAATCAAGGATTCCG+TGG 0.612773 2:+55852360 MsG0280009655.01.T01:CDS
ATCGGCGAGAAGGAGTGTTG+AGG 0.613273 2:-55848494 None:intergenic
GATGTCATCAGATCCATTGG+AGG 0.614733 2:+55852801 MsG0280009655.01.T01:CDS
TCTTGAACCTGTTTACATGG+TGG 0.615519 2:+55852564 MsG0280009655.01.T01:CDS
CTCTGTGAATAGCATCTGTG+TGG 0.615659 2:-55852471 None:intergenic
TGTTGACGAGACAAAGATGA+TGG 0.617389 2:+55851091 MsG0280009655.01.T01:CDS
TCGAAGTGCAGCAGTAACCT+CGG 0.626299 2:-55850729 None:intergenic
GTTGGAGGATGGGCTTGCAG+AGG 0.626552 2:+55852168 MsG0280009655.01.T01:CDS
AACCACCATGTTGGGCCCGG+TGG 0.628249 2:-55852311 None:intergenic
TTTGACACATAAAGCATGAG+AGG 0.628659 2:-55851512 None:intergenic
TCTGAAGGACACAACAGGGT+CGG 0.628668 2:-55852062 None:intergenic
TGAGACCACCGGGCCCAACA+TGG 0.629138 2:+55852306 MsG0280009655.01.T01:CDS
GTACATGGAAGCTAGACCGT+TGG 0.629595 2:+55852150 MsG0280009655.01.T01:CDS
AGGGATCACCATGAAATCAG+AGG 0.629809 2:+55851292 MsG0280009655.01.T01:CDS
GCTCCAGGTTGATGGAGAGG+AGG 0.629905 2:+55850887 MsG0280009655.01.T01:CDS
CCACTGGAATCCAGCAACCA+CGG 0.634741 2:-55852377 None:intergenic
ATCAGAAACTGTGACCCTGA+AGG 0.637113 2:+55851488 MsG0280009655.01.T01:CDS
ACATACGAAGATCCATTGCT+CGG 0.638323 2:+55850960 MsG0280009655.01.T01:CDS
CTCTTGCGCAATAATTCCAG+CGG 0.638686 2:-55850516 None:intergenic
ACGAGACAAAGATGATGGAG+AGG 0.640462 2:+55851096 MsG0280009655.01.T01:CDS
ACAAATCTTTCTTCTCCCCA+GGG 0.641869 2:-55851640 None:intergenic
GTCAGATCATTCCTACTGCT+AGG 0.642716 2:+55852500 MsG0280009655.01.T01:CDS
TCTCTCTGAAGGACACAACA+GGG 0.645685 2:-55852066 None:intergenic
TTATCTTCAAACTCAGAGAG+AGG 0.647532 2:-55852892 None:intergenic
TGAAACGTGTCATGCAGACA+TGG 0.650889 2:+55851342 MsG0280009655.01.T01:CDS
ATGAGGGCACAATAGGACCA+AGG 0.652106 2:+55852197 MsG0280009655.01.T01:CDS
AGTGTTCTTAATCAGAAGCG+TGG 0.654359 2:+55852625 MsG0280009655.01.T01:CDS
TTGTGACCGATATTCGCAAG+AGG 0.654765 2:+55852845 MsG0280009655.01.T01:CDS
TGAGGGCACAATAGGACCAA+GGG 0.659043 2:+55852198 MsG0280009655.01.T01:CDS
AGTGATCAAACACACACTGA+GGG 0.666361 2:-55852771 None:intergenic
TGTGAATAGCATCTGTGTGG+AGG 0.668498 2:-55852468 None:intergenic
AGATCTTAGAACGATTCTTG+GGG 0.672368 2:-55852225 None:intergenic
ATGTCTTTGAAGAAATGCAG+AGG 0.672505 2:+55852650 MsG0280009655.01.T01:CDS
ACAGATGCTATTCACAGAGG+AGG 0.677991 2:+55852475 MsG0280009655.01.T01:CDS
GACCACCGGGCCCAACATGG+TGG 0.678120 2:+55852309 MsG0280009655.01.T01:CDS
ATGATCAGAAGGATAAGTTG+TGG 0.678564 2:+55851252 MsG0280009655.01.T01:CDS
TCTGAGCTGTAGATGGAGAG+GGG 0.681622 2:-55851409 None:intergenic
GGGTTTGGCAGTCAGCTGTG+AGG 0.683722 2:-55852536 None:intergenic
CCTCTCCATCTACAGCTCAG+AGG 0.688379 2:+55851411 MsG0280009655.01.T01:CDS
GTAGCATATTGATCATCAAG+GGG 0.693284 2:-55851461 None:intergenic
AAAGAGACAAGAAACTGTTG+AGG 0.699510 2:+55851700 MsG0280009655.01.T01:CDS
GCACGTCGACTTCTCATCCG+AGG 0.699721 2:+55850712 MsG0280009655.01.T01:CDS
ATGGTGGTTGATATGTGTAA+GGG 0.703374 2:+55852325 MsG0280009655.01.T01:CDS
CAACTGGCTGGAGAATCCAA+AGG 0.706369 2:-55852722 None:intergenic
ATAGCGACTGTGTTACCACA+AGG 0.708586 2:-55851728 None:intergenic
TACTGATGGAGCACTAGTGG+TGG 0.711986 2:+55850754 MsG0280009655.01.T01:CDS
CAAACCAGCAGAGAAAGCAA+CGG 0.712240 2:-55851012 None:intergenic
GAGCTGTAGATGGAGAGGGG+AGG 0.713518 2:-55851406 None:intergenic
CAGTGATCAAACACACACTG+AGG 0.714442 2:-55852772 None:intergenic
CGTGCTGATGAAGCTGAACG+TGG 0.724162 2:+55850569 MsG0280009655.01.T01:CDS
TGAGAAGTCGACGTGCCCAG+GGG 0.727128 2:-55850705 None:intergenic
ATAGTATAGAGAGATACCAG+TGG 0.738183 2:-55850606 None:intergenic
CACACAGATGCTATTCACAG+AGG 0.756926 2:+55852472 MsG0280009655.01.T01:CDS
ACTGTTGAGGACGTGCCTTG+TGG 0.777453 2:+55851713 MsG0280009655.01.T01:CDS
GTGACTTACTCATCACAGTG+CGG 0.790076 2:-55852108 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATAAACGTTATAAATT+AGG - Chr2:55849766-55849785 None:intergenic 10.0%
!! AAAAACCATAAAAATTATGA+TGG - Chr2:55848862-55848881 None:intergenic 15.0%
!! AACCTATTTATAATATTTAG+AGG + Chr2:55849989-55850008 MsG0280009655.01.T01:intron 15.0%
!! ATGAAAAAACAATTAACTAA+GGG - Chr2:55850342-55850361 None:intergenic 15.0%
!! TATGAAAAAACAATTAACTA+AGG - Chr2:55850343-55850362 None:intergenic 15.0%
!! TTCCTCTAAATATTATAAAT+AGG - Chr2:55849994-55850013 None:intergenic 15.0%
!!! TGATTTTCTCAAATAATTAA+TGG - Chr2:55849145-55849164 None:intergenic 15.0%
!! AAAACAGATAATAATGTGAT+TGG - Chr2:55849243-55849262 None:intergenic 20.0%
!! AATTGTATGAATTGGATTAA+TGG + Chr2:55848665-55848684 MsG0280009655.01.T01:intron 20.0%
!! ATCTTAATAATCTGAAAGAT+AGG - Chr2:55850119-55850138 None:intergenic 20.0%
!! ATCTTAATAATCTGAAAGAT+GGG - Chr2:55850119-55850138 None:intergenic 20.0%
!! ATTGTATGAATTGGATTAAT+GGG + Chr2:55848666-55848685 MsG0280009655.01.T01:intron 20.0%
!! TATCTTAATAATCTGAAAGA+TGG - Chr2:55850120-55850139 None:intergenic 20.0%
!! TGAAAAAACAATTAACTAAG+GGG - Chr2:55850341-55850360 None:intergenic 20.0%
!!! ACTTTAAAGACTATTCAAAA+TGG + Chr2:55849479-55849498 MsG0280009655.01.T01:exon 20.0%
!!! CATTACCATCATAATTTTTA+TGG + Chr2:55848854-55848873 MsG0280009655.01.T01:intron 20.0%
!!! TATGGTTTTTATGTGTTTTA+TGG + Chr2:55848872-55848891 MsG0280009655.01.T01:intron 20.0%
!!! TATTATCTGTTTTGTTCAAT+TGG + Chr2:55849250-55849269 MsG0280009655.01.T01:intron 20.0%
! AAAATGGTAAGTTTACAAAC+AGG + Chr2:55849495-55849514 MsG0280009655.01.T01:intron 25.0%
! AAAATTTCATAGCACGAATA+GGG - Chr2:55851820-55851839 None:intergenic 25.0%
! AAATGGTAAGTTTACAAACA+GGG + Chr2:55849496-55849515 MsG0280009655.01.T01:intron 25.0%
! AATGATTACAAATTGAGATG+TGG + Chr2:55848960-55848979 MsG0280009655.01.T01:intron 25.0%
! ATCATTCAAACTAGCAAATT+TGG - Chr2:55850422-55850441 None:intergenic 25.0%
! GTTGTTTGACAAGAAATTAT+TGG + Chr2:55849912-55849931 MsG0280009655.01.T01:intron 25.0%
! TAATTGTAATGAACTGATCT+TGG + Chr2:55848802-55848821 MsG0280009655.01.T01:intron 25.0%
! TATGTGTGAATTGTATGAAT+TGG + Chr2:55848657-55848676 MsG0280009655.01.T01:intron 25.0%
!! TTTATGTGTTTTATGGTTGA+AGG + Chr2:55848879-55848898 MsG0280009655.01.T01:intron 25.0%
!! TTTTCTTAAGAAAATGTGTC+CGG - Chr2:55849220-55849239 None:intergenic 25.0%
!! TTTTCTTAAGATTGATGTTC+TGG + Chr2:55849025-55849044 MsG0280009655.01.T01:intron 25.0%
!!! AATTTGTTTGCTTTTCGATT+TGG + Chr2:55848993-55849012 MsG0280009655.01.T01:intron 25.0%
!!! ATTAATGGGTTCTTTTTTCA+CGG + Chr2:55848680-55848699 MsG0280009655.01.T01:intron 25.0%
!!! ATTCATTAACACATTGACTT+TGG + Chr2:55849888-55849907 MsG0280009655.01.T01:intron 25.0%
AAAAACAATCTGCATCATAG+AGG - Chr2:55850032-55850051 None:intergenic 30.0%
AAAACAATCTGCATCATAGA+GGG - Chr2:55850031-55850050 None:intergenic 30.0%
AAGATCTTAGAACGATTCTT+GGG - Chr2:55852229-55852248 None:intergenic 30.0%
AAGATGTATGCCTCTAAATT+TGG + Chr2:55851068-55851087 MsG0280009655.01.T01:CDS 30.0%
AATTTGATCTTTGCTTGACA+AGG + Chr2:55850237-55850256 MsG0280009655.01.T01:intron 30.0%
AGTAGCATATTGATCATCAA+GGG - Chr2:55851465-55851484 None:intergenic 30.0%
ATAAAAGCTGCTAAACATAC+AGG - Chr2:55849286-55849305 None:intergenic 30.0%
ATTTGTCAATGTAGCATTCT+TGG - Chr2:55851777-55851796 None:intergenic 30.0%
CCAATACTTGAATGAAATCA+AGG + Chr2:55852351-55852370 MsG0280009655.01.T01:CDS 30.0%
CCTTGATTTCATTCAAGTAT+TGG - Chr2:55852354-55852373 None:intergenic 30.0%
GAAAATTTCATAGCACGAAT+AGG - Chr2:55851821-55851840 None:intergenic 30.0%
GTGGAAACATCATAACAATA+CGG - Chr2:55850182-55850201 None:intergenic 30.0%
GTTTGACAAGAAATTATTGG+CGG + Chr2:55849915-55849934 MsG0280009655.01.T01:intron 30.0%
TATGCTTTGATGTTGTAAAG+TGG - Chr2:55852685-55852704 None:intergenic 30.0%
TTGAATGTAATGACATGTGT+TGG + Chr2:55849170-55849189 MsG0280009655.01.T01:intron 30.0%
!! AAAGTTGATTTTCCTGCAAA+TGG - Chr2:55850476-55850495 None:intergenic 30.0%
!! ATTAATCTTATTGATTCCCC+TGG + Chr2:55850689-55850708 MsG0280009655.01.T01:CDS 30.0%
!! GATTCTCTGAAGAGTTTTAA+GGG + Chr2:55850641-55850660 MsG0280009655.01.T01:CDS 30.0%
!! GATTGTGTTGATCTTCATTT+TGG + Chr2:55849709-55849728 MsG0280009655.01.T01:intron 30.0%
!! TAAAGTTTCAACTGGTTTGA+AGG + Chr2:55851592-55851611 MsG0280009655.01.T01:CDS 30.0%
!! TTAATCTTATTGATTCCCCT+GGG + Chr2:55850690-55850709 MsG0280009655.01.T01:CDS 30.0%
!! TTTTCTGGTAAAGTTTCAAC+TGG + Chr2:55851584-55851603 MsG0280009655.01.T01:CDS 30.0%
!!! AAAGGAAGGTTTTTTGCTTT+TGG + Chr2:55851554-55851573 MsG0280009655.01.T01:CDS 30.0%
!!! ATTCTCTGAAGAGTTTTAAG+GGG + Chr2:55850642-55850661 MsG0280009655.01.T01:CDS 30.0%
!!! CGATAGTATGTTTTTTCTCT+TGG + Chr2:55849063-55849082 MsG0280009655.01.T01:intron 30.0%
!!! CTGATTTTTTTTCCATTTGC+AGG + Chr2:55850461-55850480 MsG0280009655.01.T01:intron 30.0%
!!! GCTTTTCGATTTGGATAAAT+TGG + Chr2:55849002-55849021 MsG0280009655.01.T01:intron 30.0%
AAACCTTCCTTTATCAGAAG+CGG - Chr2:55851546-55851565 None:intergenic 35.0%
AAAGAGACAAGAAACTGTTG+AGG + Chr2:55851700-55851719 MsG0280009655.01.T01:CDS 35.0%
AATCTGAAAGATGGGATAAG+TGG - Chr2:55850201-55850220 None:intergenic 35.0%
ACAATTCAGTTACTCACTCT+AGG + Chr2:55848431-55848450 MsG0280009655.01.T01:five_prime_UTR 35.0%
ACAGACACGAATTACAGTTT+AGG - Chr2:55849569-55849588 None:intergenic 35.0%
ACTTCTTGAACCTGTTTACA+TGG + Chr2:55852561-55852580 MsG0280009655.01.T01:CDS 35.0%
AGATCTTAGAACGATTCTTG+GGG - Chr2:55852228-55852247 None:intergenic 35.0%
ATAGTATAGAGAGATACCAG+TGG - Chr2:55850609-55850628 None:intergenic 35.0%
ATCACATACTTCAAAGCAGA+TGG - Chr2:55852443-55852462 None:intergenic 35.0%
ATGAAATTGACACTGGACAA+TGG + Chr2:55849088-55849107 MsG0280009655.01.T01:intron 35.0%
ATGATCAGAAGGATAAGTTG+TGG + Chr2:55851252-55851271 MsG0280009655.01.T01:CDS 35.0%
CAAGATCTTAGAACGATTCT+TGG - Chr2:55852230-55852249 None:intergenic 35.0%
CAATTCAGTTACTCACTCTA+GGG + Chr2:55848432-55848451 MsG0280009655.01.T01:five_prime_UTR 35.0%
CACTTGTATGAATGATCAGA+AGG + Chr2:55851241-55851260 MsG0280009655.01.T01:CDS 35.0%
CAGTAGCATATTGATCATCA+AGG - Chr2:55851466-55851485 None:intergenic 35.0%
CATCTTGTTAACTGTCAGAA+CGG - Chr2:55850850-55850869 None:intergenic 35.0%
CGTGTTGAGAATTTGTATGA+GGG + Chr2:55851437-55851456 MsG0280009655.01.T01:CDS 35.0%
GAAGAGAAAGAAGAGAGAAT+CGG - Chr2:55848515-55848534 None:intergenic 35.0%
GATTCTCTCTTCTTTCTCTT+CGG + Chr2:55848514-55848533 MsG0280009655.01.T01:five_prime_UTR 35.0%
GATTTGCAGGATGATTTCAT+GGG + Chr2:55852019-55852038 MsG0280009655.01.T01:CDS 35.0%
GGTTTGAAGGTCAGAATTAT+GGG + Chr2:55851605-55851624 MsG0280009655.01.T01:CDS 35.0%
GTAGCATATTGATCATCAAG+GGG - Chr2:55851464-55851483 None:intergenic 35.0%
GTGTTAATGACCTGCTTAAT+AGG - Chr2:55851224-55851243 None:intergenic 35.0%
GTGTTCAGAGAACTGTTATT+TGG + Chr2:55851672-55851691 MsG0280009655.01.T01:CDS 35.0%
TAAACAGGTTCAAGAAGTCT+GGG - Chr2:55852559-55852578 None:intergenic 35.0%
TAATTCGTGTCTGTATTTGC+AGG + Chr2:55849575-55849594 MsG0280009655.01.T01:intron 35.0%
TACAATCTGTTGTGCTTGTT+GGG - Chr2:55852133-55852152 None:intergenic 35.0%
TATGATGTCATCAGATCCAT+TGG + Chr2:55852798-55852817 MsG0280009655.01.T01:CDS 35.0%
TATGGTTGTTTGTACCATTG+AGG + Chr2:55851937-55851956 MsG0280009655.01.T01:CDS 35.0%
TCAATGGTACAAACAACCAT+AGG - Chr2:55851938-55851957 None:intergenic 35.0%
TCATCTTGAGATCTGTTTGA+AGG + Chr2:55851997-55852016 MsG0280009655.01.T01:CDS 35.0%
TCGTGTTGAGAATTTGTATG+AGG + Chr2:55851436-55851455 MsG0280009655.01.T01:CDS 35.0%
TCTAACAAACTCCTTCTTTG+TGG + Chr2:55849456-55849475 MsG0280009655.01.T01:five_prime_UTR 35.0%
TGAGAATGCTAATGTGATCA+TGG + Chr2:55850935-55850954 MsG0280009655.01.T01:CDS 35.0%
TGCTACATTGACAAATGAGA+AGG + Chr2:55851781-55851800 MsG0280009655.01.T01:CDS 35.0%
TGGTTTGAAGGTCAGAATTA+TGG + Chr2:55851604-55851623 MsG0280009655.01.T01:CDS 35.0%
TTATCTTCAAACTCAGAGAG+AGG - Chr2:55852895-55852914 None:intergenic 35.0%
TTTGACACATAAAGCATGAG+AGG - Chr2:55851515-55851534 None:intergenic 35.0%
! ATGGTGGTTGATATGTGTAA+GGG + Chr2:55852325-55852344 MsG0280009655.01.T01:CDS 35.0%
! ATGTCTTTGAAGAAATGCAG+AGG + Chr2:55852650-55852669 MsG0280009655.01.T01:CDS 35.0%
! CAGAGAACTGTTATTTGGAT+GGG + Chr2:55851677-55851696 MsG0280009655.01.T01:CDS 35.0%
! TCAGAGAACTGTTATTTGGA+TGG + Chr2:55851676-55851695 MsG0280009655.01.T01:CDS 35.0%
! TCCAAAACACCAGATTTTCT+TGG - Chr2:55852284-55852303 None:intergenic 35.0%
!! CGATTCTCTGAAGAGTTTTA+AGG + Chr2:55850640-55850659 MsG0280009655.01.T01:CDS 35.0%
!! GTCTTTAAAGTCCACAAAGA+AGG - Chr2:55849470-55849489 None:intergenic 35.0%
!!! GATCTATGCGTTGATTTTCA+TGG + Chr2:55848608-55848627 MsG0280009655.01.T01:intron 35.0%
!!! TTCTCTGAAGAGTTTTAAGG+GGG + Chr2:55850643-55850662 MsG0280009655.01.T01:CDS 35.0%
!!! TTGATCTTCATTTTGGTGTC+TGG + Chr2:55849716-55849735 MsG0280009655.01.T01:intron 35.0%
AACCTTCCTTTATCAGAAGC+GGG - Chr2:55851545-55851564 None:intergenic 40.0%
AAGATCTTGTCCGAACAGTA+TGG + Chr2:55852241-55852260 MsG0280009655.01.T01:CDS 40.0%
AATCCAAAGGACTCAATGAC+AGG - Chr2:55852712-55852731 None:intergenic 40.0%
ACAAATCTTTCTTCTCCCCA+GGG - Chr2:55851643-55851662 None:intergenic 40.0%
ACACATATCAACCACCATGT+TGG - Chr2:55852323-55852342 None:intergenic 40.0%
ACATACGAAGATCCATTGCT+CGG + Chr2:55850960-55850979 MsG0280009655.01.T01:CDS 40.0%
AGGATCTTGCCAAGAAAATC+TGG + Chr2:55852272-55852291 MsG0280009655.01.T01:CDS 40.0%
AGTGATCAAACACACACTGA+GGG - Chr2:55852774-55852793 None:intergenic 40.0%
AGTGTTCTTAATCAGAAGCG+TGG + Chr2:55852625-55852644 MsG0280009655.01.T01:CDS 40.0%
ATCAGAGGAAAAGGACTTGA+TGG + Chr2:55851307-55851326 MsG0280009655.01.T01:CDS 40.0%
ATGATTCCCGCTTCTGATAA+AGG + Chr2:55851536-55851555 MsG0280009655.01.T01:CDS 40.0%
ATGCTTCAGTATCAGACAAC+TGG - Chr2:55849322-55849341 None:intergenic 40.0%
CAAGCACAACAGATTGTACA+TGG + Chr2:55852135-55852154 MsG0280009655.01.T01:CDS 40.0%
CACATATCAACCACCATGTT+GGG - Chr2:55852322-55852341 None:intergenic 40.0%
CACCATGAAATCAGAGGAAA+AGG + Chr2:55851298-55851317 MsG0280009655.01.T01:CDS 40.0%
CGTTCTGACAGTTAACAAGA+TGG + Chr2:55850848-55850867 MsG0280009655.01.T01:intron 40.0%
CTCGTCAACACCAAATTTAG+AGG - Chr2:55851081-55851100 None:intergenic 40.0%
CTGTTATGAGCCTATTAAGC+AGG + Chr2:55851211-55851230 MsG0280009655.01.T01:CDS 40.0%
CTTGGACATGAAATTGACAC+TGG + Chr2:55849081-55849100 MsG0280009655.01.T01:intron 40.0%
GAATGAAATCAAGGATTCCG+TGG + Chr2:55852360-55852379 MsG0280009655.01.T01:CDS 40.0%
GATCTGTTTGAAGGATTTGC+AGG + Chr2:55852006-55852025 MsG0280009655.01.T01:CDS 40.0%
GGATTTGCAGGATGATTTCA+TGG + Chr2:55852018-55852037 MsG0280009655.01.T01:CDS 40.0%
GGCATACATCTTTGCAAAGT+TGG - Chr2:55851060-55851079 None:intergenic 40.0%
GTAAACAGGTTCAAGAAGTC+TGG - Chr2:55852560-55852579 None:intergenic 40.0%
GTACAATCTGTTGTGCTTGT+TGG - Chr2:55852134-55852153 None:intergenic 40.0%
GTGCAAACATCACAACAACA+AGG - Chr2:55850092-55850111 None:intergenic 40.0%
GTTCAAGTGTATCCTGAGAA+AGG + Chr2:55850987-55851006 MsG0280009655.01.T01:CDS 40.0%
TACAAATCTTTCTTCTCCCC+AGG - Chr2:55851644-55851663 None:intergenic 40.0%
TCAGAGGAAAAGGACTTGAT+GGG + Chr2:55851308-55851327 MsG0280009655.01.T01:CDS 40.0%
TCAGAGTTATCGTGATCACT+CGG - Chr2:55849374-55849393 None:intergenic 40.0%
TCAGTGTGTGTTTGATCACT+GGG + Chr2:55852774-55852793 MsG0280009655.01.T01:CDS 40.0%
TCTTGAACCTGTTTACATGG+TGG + Chr2:55852564-55852583 MsG0280009655.01.T01:CDS 40.0%
TCTTGCTAAGTCAGATCCTA+TGG + Chr2:55851919-55851938 MsG0280009655.01.T01:CDS 40.0%
TGATGAGTTGCGTCGTATTA+TGG + Chr2:55849611-55849630 MsG0280009655.01.T01:CDS 40.0%
TGCATGACACGTTTCATCAA+AGG - Chr2:55851338-55851357 None:intergenic 40.0%
TGGATTTCCACCATGTAAAC+AGG - Chr2:55852574-55852593 None:intergenic 40.0%
TGTTGACGAGACAAAGATGA+TGG + Chr2:55851091-55851110 MsG0280009655.01.T01:CDS 40.0%
TTGAGACCTTCAACAAGCTT+AGG - Chr2:55851896-55851915 None:intergenic 40.0%
! AATTACTGATGGAGCACTAG+TGG + Chr2:55850751-55850770 MsG0280009655.01.T01:CDS 40.0%
! ATGTTGTAAAGTGGAGTACC+AGG - Chr2:55852676-55852695 None:intergenic 40.0%
! CATGGTGGTTGATATGTGTA+AGG + Chr2:55852324-55852343 MsG0280009655.01.T01:CDS 40.0%
! GCCAAGAAAATCTGGTGTTT+TGG + Chr2:55852280-55852299 MsG0280009655.01.T01:CDS 40.0%
! GCTTTTGGTCGTGTATTTTC+TGG + Chr2:55851569-55851588 MsG0280009655.01.T01:CDS 40.0%
! GTCCTTTTCCTCTGATTTCA+TGG - Chr2:55851303-55851322 None:intergenic 40.0%
!! AAAGATGATGGAGAGGCTTT+GGG + Chr2:55851103-55851122 MsG0280009655.01.T01:CDS 40.0%
!! ATCCCTAGCTTTGTCAACAT+CGG - Chr2:55851278-55851297 None:intergenic 40.0%
!! GATCTTCCTAAGCTTGTTGA+AGG + Chr2:55851887-55851906 MsG0280009655.01.T01:CDS 40.0%
!! TCTAGGGTTTTTCTTTCCTG+CGG + Chr2:55848448-55848467 MsG0280009655.01.T01:five_prime_UTR 40.0%
AAAGCAACGGTTCCTTTCTC+AGG - Chr2:55851002-55851021 None:intergenic 45.0%
AAAGCATGAGAGGTCCTTCA+GGG - Chr2:55851505-55851524 None:intergenic 45.0%
AAATGGACCACCAAGAACAC+TGG + Chr2:55851155-55851174 MsG0280009655.01.T01:CDS 45.0%
ACAGATGCTATTCACAGAGG+AGG + Chr2:55852475-55852494 MsG0280009655.01.T01:CDS 45.0%
ACCGATATTCGCAAGAGGAA+GGG + Chr2:55852850-55852869 MsG0280009655.01.T01:CDS 45.0%
ACTTGAACATCACCGAGCAA+TGG - Chr2:55850975-55850994 None:intergenic 45.0%
AGGGATCACCATGAAATCAG+AGG + Chr2:55851292-55851311 MsG0280009655.01.T01:CDS 45.0%
AGGTTCAAGAAGTCTGGGTT+TGG - Chr2:55852554-55852573 None:intergenic 45.0%
AGTAGCTGAACCAGTGTTCT+TGG - Chr2:55851168-55851187 None:intergenic 45.0%
ATAGCGACTGTGTTACCACA+AGG - Chr2:55851731-55851750 None:intergenic 45.0%
ATCAGAAACTGTGACCCTGA+AGG + Chr2:55851488-55851507 MsG0280009655.01.T01:CDS 45.0%
ATTATTGCGCAAGAGGTTGC+TGG + Chr2:55850524-55850543 MsG0280009655.01.T01:CDS 45.0%
CAAACCAGCAGAGAAAGCAA+CGG - Chr2:55851015-55851034 None:intergenic 45.0%
CAAAGGACTCAATGACAGGA+AGG - Chr2:55852708-55852727 None:intergenic 45.0%
CACACAGATGCTATTCACAG+AGG + Chr2:55852472-55852491 MsG0280009655.01.T01:CDS 45.0%
CAGTGATCAAACACACACTG+AGG - Chr2:55852775-55852794 None:intergenic 45.0%
CTCAGTGTGTGTTTGATCAC+TGG + Chr2:55852773-55852792 MsG0280009655.01.T01:CDS 45.0%
CTCTGTGAATAGCATCTGTG+TGG - Chr2:55852474-55852493 None:intergenic 45.0%
CTCTTGCGCAATAATTCCAG+CGG - Chr2:55850519-55850538 None:intergenic 45.0%
CTTCCTGTCATTGAGTCCTT+TGG + Chr2:55852706-55852725 MsG0280009655.01.T01:CDS 45.0%
CTTGTCCCAACCATACTGTT+CGG - Chr2:55852254-55852273 None:intergenic 45.0%
CTTGTCCGAACAGTATGGTT+GGG + Chr2:55852246-55852265 MsG0280009655.01.T01:CDS 45.0%
GATGTCATCAGATCCATTGG+AGG + Chr2:55852801-55852820 MsG0280009655.01.T01:CDS 45.0%
GCTGCACTTCGAATTACTGA+TGG + Chr2:55850740-55850759 MsG0280009655.01.T01:CDS 45.0%
GGTATCACTATCAAGTCCAC+TGG + Chr2:55850590-55850609 MsG0280009655.01.T01:CDS 45.0%
GTCAGATCATTCCTACTGCT+AGG + Chr2:55852500-55852519 MsG0280009655.01.T01:CDS 45.0%
GTGACTTACTCATCACAGTG+CGG - Chr2:55852111-55852130 None:intergenic 45.0%
GTTTGTACCATTGAGGAGTC+TGG + Chr2:55851944-55851963 MsG0280009655.01.T01:CDS 45.0%
TAAAGCATGAGAGGTCCTTC+AGG - Chr2:55851506-55851525 None:intergenic 45.0%
TAGAAGACTCTCCTAGCAGT+AGG - Chr2:55852514-55852533 None:intergenic 45.0%
TCCTATTGTGCCCTCATCAA+TGG - Chr2:55852194-55852213 None:intergenic 45.0%
TCTGGAGAACACATTGTTGC+TGG + Chr2:55851962-55851981 MsG0280009655.01.T01:CDS 45.0%
TCTTGTCCGAACAGTATGGT+TGG + Chr2:55852245-55852264 MsG0280009655.01.T01:CDS 45.0%
TGAAACGTGTCATGCAGACA+TGG + Chr2:55851342-55851361 MsG0280009655.01.T01:CDS 45.0%
TGAGTCGACATATCGTGTCA+AGG - Chr2:55849120-55849139 None:intergenic 45.0%
TGTGAATAGCATCTGTGTGG+AGG - Chr2:55852471-55852490 None:intergenic 45.0%
TTCCAGTGGGCATCAAAAGA+AGG + Chr2:55852391-55852410 MsG0280009655.01.T01:CDS 45.0%
TTCCCGCTTCTGATAAAGGA+AGG + Chr2:55851540-55851559 MsG0280009655.01.T01:CDS 45.0%
TTCTCCCCAGGGACAAAATT+TGG - Chr2:55851632-55851651 None:intergenic 45.0%
TTGATCCTGCCACCAAGAAA+TGG + Chr2:55851138-55851157 MsG0280009655.01.T01:CDS 45.0%
TTGCAGGATGATTTCATGGG+TGG + Chr2:55852022-55852041 MsG0280009655.01.T01:CDS 45.0%
TTGTGACCGATATTCGCAAG+AGG + Chr2:55852845-55852864 MsG0280009655.01.T01:CDS 45.0%
TTGTGGTAACACAGTCGCTA+TGG + Chr2:55851730-55851749 MsG0280009655.01.T01:CDS 45.0%
TTTGAAGAAATGCAGAGGCC+TGG + Chr2:55852655-55852674 MsG0280009655.01.T01:CDS 45.0%
! ATGGGACCAAATTTTGTCCC+TGG + Chr2:55851623-55851642 MsG0280009655.01.T01:CDS 45.0%
! GTTCTTGGTGGTCCATTTCT+TGG - Chr2:55851153-55851172 None:intergenic 45.0%
! TCTCTCTGAAGGACACAACA+GGG - Chr2:55852069-55852088 None:intergenic 45.0%
! TGGGACCAAATTTTGTCCCT+GGG + Chr2:55851624-55851643 MsG0280009655.01.T01:CDS 45.0%
!! AAGATGATGGAGAGGCTTTG+GGG + Chr2:55851104-55851123 MsG0280009655.01.T01:CDS 45.0%
!! AAGGAGTGTTGAGGAAGAAG+AGG - Chr2:55848488-55848507 None:intergenic 45.0%
!! ACGAGACAAAGATGATGGAG+AGG + Chr2:55851096-55851115 MsG0280009655.01.T01:CDS 45.0%
!! CAAAGATGATGGAGAGGCTT+TGG + Chr2:55851102-55851121 MsG0280009655.01.T01:CDS 45.0%
!! CTCTAGAACAGTCTCTCTGA+AGG - Chr2:55852080-55852099 None:intergenic 45.0%
!! TATAATTTAAATTTGATTAA+TGG + Chr2:55850138-55850157 MsG0280009655.01.T01:intron 5.0%
AAGCTAGACCGTTGGAGGAT+GGG + Chr2:55852158-55852177 MsG0280009655.01.T01:CDS 50.0%
AATTCCAGCGGCAGCAACAA+GGG - Chr2:55850507-55850526 None:intergenic 50.0%
ACGTTCAGCTTCATCAGCAC+GGG - Chr2:55850570-55850589 None:intergenic 50.0%
AGAAGAGAGAATCGGCGAGA+AGG - Chr2:55848507-55848526 None:intergenic 50.0%
AGCTGAACCAGTGTTCTTGG+TGG - Chr2:55851165-55851184 None:intergenic 50.0%
ATCAAGGATTCCGTGGTTGC+TGG + Chr2:55852367-55852386 MsG0280009655.01.T01:CDS 50.0%
CAACTGGCTGGAGAATCCAA+AGG - Chr2:55852725-55852744 None:intergenic 50.0%
CACGTTCAGCTTCATCAGCA+CGG - Chr2:55850571-55850590 None:intergenic 50.0%
CGAACAGTATGGTTGGGACA+AGG + Chr2:55852252-55852271 MsG0280009655.01.T01:CDS 50.0%
CGATACCTCTGAGCTGTAGA+TGG - Chr2:55851419-55851438 None:intergenic 50.0%
CGCTGGAATTATTGCGCAAG+AGG + Chr2:55850517-55850536 MsG0280009655.01.T01:CDS 50.0%
CTCTGAGCTGTAGATGGAGA+GGG - Chr2:55851413-55851432 None:intergenic 50.0%
CTTGCAGAGGCCATTGATGA+GGG + Chr2:55852181-55852200 MsG0280009655.01.T01:CDS 50.0%
GAACACATTGTTGCTGGTGC+AGG + Chr2:55851968-55851987 MsG0280009655.01.T01:CDS 50.0%
GACCGATATTCGCAAGAGGA+AGG + Chr2:55852849-55852868 MsG0280009655.01.T01:CDS 50.0%
GATGCTATTCACAGAGGAGG+TGG + Chr2:55852478-55852497 MsG0280009655.01.T01:CDS 50.0%
GCCCTTCCTCTTGCGAATAT+CGG - Chr2:55852854-55852873 None:intergenic 50.0%
GGCCGATGTTGACAAAGCTA+GGG + Chr2:55851273-55851292 MsG0280009655.01.T01:CDS 50.0%
GGTAACACAGTCGCTATGGT+TGG + Chr2:55851734-55851753 MsG0280009655.01.T01:CDS 50.0%
GTACATGGAAGCTAGACCGT+TGG + Chr2:55852150-55852169 MsG0280009655.01.T01:CDS 50.0%
GTCATTGCTCACGTCGATCA+TGG + Chr2:55849663-55849682 MsG0280009655.01.T01:CDS 50.0%
GTGTTCTCCAGACTCCTCAA+TGG - Chr2:55851954-55851973 None:intergenic 50.0%
GTTCAGCTACTTGCAAGCGT+GGG + Chr2:55851177-55851196 MsG0280009655.01.T01:CDS 50.0%
TAATTCCAGCGGCAGCAACA+AGG - Chr2:55850508-55850527 None:intergenic 50.0%
TACACCGACATGTTGGACAC+CGG + Chr2:55849198-55849217 MsG0280009655.01.T01:intron 50.0%
TCATCAGATCCATTGGAGGC+TGG + Chr2:55852805-55852824 MsG0280009655.01.T01:CDS 50.0%
TCGAAGTGCAGCAGTAACCT+CGG - Chr2:55850732-55850751 None:intergenic 50.0%
TCTGAAGGACACAACAGGGT+CGG - Chr2:55852065-55852084 None:intergenic 50.0%
TCTGAGCTGTAGATGGAGAG+GGG - Chr2:55851412-55851431 None:intergenic 50.0%
TGAACAGCAACACGCACAAC+AGG - Chr2:55851851-55851870 None:intergenic 50.0%
TGCTCACGTCGATCATGGTA+TGG + Chr2:55849668-55849687 MsG0280009655.01.T01:intron 50.0%
TGGATTCTCCAGCCAGTTGA+GGG + Chr2:55852726-55852745 MsG0280009655.01.T01:CDS 50.0%
TGGCCGATGTTGACAAAGCT+AGG + Chr2:55851272-55851291 MsG0280009655.01.T01:CDS 50.0%
TTCTTTCCTGCGGCTGTGAA+GGG + Chr2:55848458-55848477 MsG0280009655.01.T01:five_prime_UTR 50.0%
TTGGATTCTCCAGCCAGTTG+AGG + Chr2:55852725-55852744 MsG0280009655.01.T01:CDS 50.0%
TTTCTTTCCTGCGGCTGTGA+AGG + Chr2:55848457-55848476 MsG0280009655.01.T01:five_prime_UTR 50.0%
! ATACCACCAAGAGCTTGCTC+AGG - Chr2:55852601-55852620 None:intergenic 50.0%
! ATGAGGGCACAATAGGACCA+AGG + Chr2:55852197-55852216 MsG0280009655.01.T01:CDS 50.0%
! CAAGAAGTGCAGTGCTTGCT+GGG - Chr2:55851370-55851389 None:intergenic 50.0%
! CACAGTCGCTATGGTTGGTT+TGG + Chr2:55851739-55851758 MsG0280009655.01.T01:CDS 50.0%
! CACCTTCTTTTGATGCCCAC+TGG - Chr2:55852396-55852415 None:intergenic 50.0%
! CTTGGTGGTCCATTTCTTGG+TGG - Chr2:55851150-55851169 None:intergenic 50.0%
! GCCATTGATGAGGGCACAAT+AGG + Chr2:55852190-55852209 MsG0280009655.01.T01:CDS 50.0%
! GGGACCAAATTTTGTCCCTG+GGG + Chr2:55851625-55851644 MsG0280009655.01.T01:CDS 50.0%
! GGTGTCATACACCGACATGT+TGG + Chr2:55849191-55849210 MsG0280009655.01.T01:intron 50.0%
! GTCTCTCTGAAGGACACAAC+AGG - Chr2:55852070-55852089 None:intergenic 50.0%
! TACTGATGGAGCACTAGTGG+TGG + Chr2:55850754-55850773 MsG0280009655.01.T01:CDS 50.0%
! TCAAGAAGTGCAGTGCTTGC+TGG - Chr2:55851371-55851390 None:intergenic 50.0%
! TGAGGGCACAATAGGACCAA+GGG + Chr2:55852198-55852217 MsG0280009655.01.T01:CDS 50.0%
! TTCCTTGAGCTCCAGGTTGA+TGG + Chr2:55850879-55850898 MsG0280009655.01.T01:CDS 50.0%
!! AGTGGTGGTGGATTGTGTTG+AGG + Chr2:55850769-55850788 MsG0280009655.01.T01:CDS 50.0%
!! GCTTTCTCTGCTGGTTTGCA+CGG + Chr2:55851017-55851036 MsG0280009655.01.T01:CDS 50.0%
!! GTGGTGGTGGATTGTGTTGA+GGG + Chr2:55850770-55850789 MsG0280009655.01.T01:CDS 50.0%
!! TGGTGGTGGATTGTGTTGAG+GGG + Chr2:55850771-55850790 MsG0280009655.01.T01:CDS 50.0%
!! TGTTTTGGACCTGAGACCAC+CGG + Chr2:55852295-55852314 MsG0280009655.01.T01:CDS 50.0%
!!! AGTTTTAAGGGGGAGCGCAA+TGG + Chr2:55850653-55850672 MsG0280009655.01.T01:CDS 50.0%
!!! GTTTTAAGGGGGAGCGCAAT+GGG + Chr2:55850654-55850673 MsG0280009655.01.T01:CDS 50.0%
AAGCCTCCTCTCCATCAACC+TGG - Chr2:55850893-55850912 None:intergenic 55.0%
ACTGTTGAGGACGTGCCTTG+TGG + Chr2:55851713-55851732 MsG0280009655.01.T01:CDS 55.0%
AGTTGAGGGCCGCAACATCA+GGG + Chr2:55852740-55852759 MsG0280009655.01.T01:CDS 55.0%
ATCAACCACCATGTTGGGCC+CGG - Chr2:55852317-55852336 None:intergenic 55.0%
ATGAGAAGTCGACGTGCCCA+GGG - Chr2:55850709-55850728 None:intergenic 55.0%
CAAGCTCCTGAGCAAGCTCT+TGG + Chr2:55852592-55852611 MsG0280009655.01.T01:CDS 55.0%
CAGATGCTTCCTTGAGCTCC+AGG + Chr2:55850872-55850891 MsG0280009655.01.T01:intron 55.0%
CATGGAAGCTAGACCGTTGG+AGG + Chr2:55852153-55852172 MsG0280009655.01.T01:CDS 55.0%
CCACTGGAATCCAGCAACCA+CGG - Chr2:55852380-55852399 None:intergenic 55.0%
CCTCTCCATCTACAGCTCAG+AGG + Chr2:55851411-55851430 MsG0280009655.01.T01:CDS 55.0%
CCTCTGAGCTGTAGATGGAG+AGG - Chr2:55851414-55851433 None:intergenic 55.0%
CGATTCTTGGGGTCATCCCT+TGG - Chr2:55852217-55852236 None:intergenic 55.0%
CGTGGTTGCTGGATTCCAGT+GGG + Chr2:55852378-55852397 MsG0280009655.01.T01:CDS 55.0%
CTCCATCAACCTGGAGCTCA+AGG - Chr2:55850884-55850903 None:intergenic 55.0%
GAAGCTAGACCGTTGGAGGA+TGG + Chr2:55852157-55852176 MsG0280009655.01.T01:CDS 55.0%
GAATGCCTGCCCTGATGTTG+CGG - Chr2:55852752-55852771 None:intergenic 55.0%
GACTGAAACTGTGCTGCGAC+AGG + Chr2:55850804-55850823 MsG0280009655.01.T01:intron 55.0%
GCTTGCAGAGGCCATTGATG+AGG + Chr2:55852180-55852199 MsG0280009655.01.T01:CDS 55.0%
GCTTGTGATCCAGCCTCCAA+TGG - Chr2:55852817-55852836 None:intergenic 55.0%
GGTTCAGCTACTTGCAAGCG+TGG + Chr2:55851176-55851195 MsG0280009655.01.T01:CDS 55.0%
GTGTCCGGTGTCCAACATGT+CGG - Chr2:55849205-55849224 None:intergenic 55.0%
TCGCAAGAGGAAGGGCTTGA+AGG + Chr2:55852858-55852877 MsG0280009655.01.T01:CDS 55.0%
TCTGCAAGCCCATCCTCCAA+CGG - Chr2:55852169-55852188 None:intergenic 55.0%
TGCGACAGGCTCTTGGAGAA+AGG + Chr2:55850818-55850837 MsG0280009655.01.T01:intron 55.0%
! CAAGAGCTTGCTCAGGAGCT+TGG - Chr2:55852594-55852613 None:intergenic 55.0%
! CGTGCTGATGAAGCTGAACG+TGG + Chr2:55850569-55850588 MsG0280009655.01.T01:CDS 55.0%
! GCGTGTTGCTGTTCAGTGCA+AGG + Chr2:55851856-55851875 MsG0280009655.01.T01:CDS 55.0%
! GGAACCGTTGCTTTCTCTGC+TGG + Chr2:55851008-55851027 MsG0280009655.01.T01:CDS 55.0%
! GTGGTCCATTTCTTGGTGGC+AGG - Chr2:55851146-55851165 None:intergenic 55.0%
! TGATGGAGCACTAGTGGTGG+TGG + Chr2:55850757-55850776 MsG0280009655.01.T01:CDS 55.0%
!! ATCGGCGAGAAGGAGTGTTG+AGG - Chr2:55848497-55848516 None:intergenic 55.0%
!! CTCTGCTGGTTTGCACGGTT+GGG + Chr2:55851022-55851041 MsG0280009655.01.T01:CDS 55.0%
!! GTTTTGGACCTGAGACCACC+GGG + Chr2:55852296-55852315 MsG0280009655.01.T01:CDS 55.0%
!! TCTCTGCTGGTTTGCACGGT+TGG + Chr2:55851021-55851040 MsG0280009655.01.T01:CDS 55.0%
!! TGAGCTCCAGGTTGATGGAG+AGG + Chr2:55850884-55850903 MsG0280009655.01.T01:CDS 55.0%
ACTGTGCTGCGACAGGCTCT+TGG + Chr2:55850811-55850830 MsG0280009655.01.T01:intron 60.0%
CAGTTGAGGGCCGCAACATC+AGG + Chr2:55852739-55852758 MsG0280009655.01.T01:CDS 60.0%
CCGTGGTTGCTGGATTCCAG+TGG + Chr2:55852377-55852396 MsG0280009655.01.T01:CDS 60.0%
CTGATGTTGCGGCCCTCAAC+TGG - Chr2:55852741-55852760 None:intergenic 60.0%
GAGCTGTAGATGGAGAGGGG+AGG - Chr2:55851409-55851428 None:intergenic 60.0%
GATGAGAAGTCGACGTGCCC+AGG - Chr2:55850710-55850729 None:intergenic 60.0%
GATTCCCTTGTTGCTGCCGC+TGG + Chr2:55850500-55850519 MsG0280009655.01.T01:CDS 60.0%
GCTCCTGAGCAAGCTCTTGG+TGG + Chr2:55852595-55852614 MsG0280009655.01.T01:CDS 60.0%
GGGTTTGGCAGTCAGCTGTG+AGG - Chr2:55852539-55852558 None:intergenic 60.0%
TGAGAAGTCGACGTGCCCAG+GGG - Chr2:55850708-55850727 None:intergenic 60.0%
! GGTTTTCCCTTCACAGCCGC+AGG - Chr2:55848467-55848486 None:intergenic 60.0%
! GTTGGAGGATGGGCTTGCAG+AGG + Chr2:55852168-55852187 MsG0280009655.01.T01:CDS 60.0%
!! GCACGTCGACTTCTCATCCG+AGG + Chr2:55850712-55850731 MsG0280009655.01.T01:CDS 60.0%
!! GCTCCAGGTTGATGGAGAGG+AGG + Chr2:55850887-55850906 MsG0280009655.01.T01:CDS 60.0%
AACCACCATGTTGGGCCCGG+TGG - Chr2:55852314-55852333 None:intergenic 65.0%
ATGTTGGGCCCGGTGGTCTC+AGG - Chr2:55852307-55852326 None:intergenic 65.0%
TGAGACCACCGGGCCCAACA+TGG + Chr2:55852306-55852325 MsG0280009655.01.T01:CDS 65.0%
TGTTGCGGCCCTCAACTGGC+TGG - Chr2:55852737-55852756 None:intergenic 65.0%
GACCACCGGGCCCAACATGG+TGG + Chr2:55852309-55852328 MsG0280009655.01.T01:CDS 70.0%
GAGGGCCGCAACATCAGGGC+AGG + Chr2:55852744-55852763 MsG0280009655.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr2 gene 55848423 55852921 55848423 ID=MsG0280009655.01;Name=MsG0280009655.01
Chr2 mRNA 55848423 55852921 55848423 ID=MsG0280009655.01.T01;Parent=MsG0280009655.01;Name=MsG0280009655.01.T01;_AED=0.49;_eAED=0.49;_QI=156|0.75|0.6|1|0.75|0.6|5|0|815
Chr2 exon 55850875 55852921 55850875 ID=MsG0280009655.01.T01:exon:5956;Parent=MsG0280009655.01.T01
Chr2 exon 55850483 55850792 55850483 ID=MsG0280009655.01.T01:exon:5955;Parent=MsG0280009655.01.T01
Chr2 exon 55849597 55849684 55849597 ID=MsG0280009655.01.T01:exon:5954;Parent=MsG0280009655.01.T01
Chr2 exon 55849455 55849500 55849455 ID=MsG0280009655.01.T01:exon:5953;Parent=MsG0280009655.01.T01
Chr2 exon 55848423 55848535 55848423 ID=MsG0280009655.01.T01:exon:5952;Parent=MsG0280009655.01.T01
Chr2 five_prime_UTR 55848423 55848535 55848423 ID=MsG0280009655.01.T01:five_prime_utr;Parent=MsG0280009655.01.T01
Chr2 five_prime_UTR 55849455 55849497 55849455 ID=MsG0280009655.01.T01:five_prime_utr;Parent=MsG0280009655.01.T01
Chr2 CDS 55849498 55849500 55849498 ID=MsG0280009655.01.T01:cds;Parent=MsG0280009655.01.T01
Chr2 CDS 55849597 55849684 55849597 ID=MsG0280009655.01.T01:cds;Parent=MsG0280009655.01.T01
Chr2 CDS 55850483 55850792 55850483 ID=MsG0280009655.01.T01:cds;Parent=MsG0280009655.01.T01
Chr2 CDS 55850875 55852921 55850875 ID=MsG0280009655.01.T01:cds;Parent=MsG0280009655.01.T01
Gene Sequence

>MsG0280009655.01.T01

ATGGTGAAGTTCACAGCTGATGAGTTGCGTCGTATTATGGACTACAAGCACAACATTCGTAACATGTCTGTCATTGCTCACGTCGATCATGGAAAATCAACTTTGACAGATTCCCTTGTTGCTGCCGCTGGAATTATTGCGCAAGAGGTTGCTGGAGATGTCAGAATGACAGATACCCGTGCTGATGAAGCTGAACGTGGTATCACTATCAAGTCCACTGGTATCTCTCTATACTATGAAATGAGTGACGATTCTCTGAAGAGTTTTAAGGGGGAGCGCAATGGGAATGAGTATCTCATTAATCTTATTGATTCCCCTGGGCACGTCGACTTCTCATCCGAGGTTACTGCTGCACTTCGAATTACTGATGGAGCACTAGTGGTGGTGGATTGTGTTGAGGGATGCTTCCTTGAGCTCCAGGTTGATGGAGAGGAGGCTTATCAGACATTCTCGAGAGTTATTGAGAATGCTAATGTGATCATGGCTACATACGAAGATCCATTGCTCGGTGATGTTCAAGTGTATCCTGAGAAAGGAACCGTTGCTTTCTCTGCTGGTTTGCACGGTTGGGCTTTTACTCTGACCAACTTTGCAAAGATGTATGCCTCTAAATTTGGTGTTGACGAGACAAAGATGATGGAGAGGCTTTGGGGTGAAAATTTCTTTGATCCTGCCACCAAGAAATGGACCACCAAGAACACTGGTTCAGCTACTTGCAAGCGTGGGTTTGTTCAGTTCTGTTATGAGCCTATTAAGCAGGTCATTAACACTTGTATGAATGATCAGAAGGATAAGTTGTGGCCGATGTTGACAAAGCTAGGGATCACCATGAAATCAGAGGAAAAGGACTTGATGGGTAAGCCTTTGATGAAACGTGTCATGCAGACATGGCTCCCAGCAAGCACTGCACTTCTTGAAATGATGATCTTTCACCTCCCCTCTCCATCTACAGCTCAGAGGTATCGTGTTGAGAATTTGTATGAGGGTCCCCTTGATGATCAATATGCTACTGCTATCAGAAACTGTGACCCTGAAGGACCTCTCATGCTTTATGTGTCAAAGATGATTCCCGCTTCTGATAAAGGAAGGTTTTTTGCTTTTGGTCGTGTATTTTCTGGTAAAGTTTCAACTGGTTTGAAGGTCAGAATTATGGGACCAAATTTTGTCCCTGGGGAGAAGAAAGATTTGTATGTGAAAAGTGTTCAGAGAACTGTTATTTGGATGGGAAAGAGACAAGAAACTGTTGAGGACGTGCCTTGTGGTAACACAGTCGCTATGGTTGGTTTGGATCAATTTATCACCAAGAATGCTACATTGACAAATGAGAAGGAAGTTGATGCACACCCTATTCGTGCTATGAAATTTTCTGTCTCACCTGTTGTGCGTGTTGCTGTTCAGTGCAAGGTTGCTTCAGATCTTCCTAAGCTTGTTGAAGGTCTCAAACGTCTTGCTAAGTCAGATCCTATGGTTGTTTGTACCATTGAGGAGTCTGGAGAACACATTGTTGCTGGTGCAGGAGAGCTTCATCTTGAGATCTGTTTGAAGGATTTGCAGGATGATTTCATGGGTGGAGCTGAGATTATCAAATCCGACCCTGTTGTGTCCTTCAGAGAGACTGTTCTAGAGAGATCATGCCGCACTGTGATGAGTAAGTCACCCAACAAGCACAACAGATTGTACATGGAAGCTAGACCGTTGGAGGATGGGCTTGCAGAGGCCATTGATGAGGGCACAATAGGACCAAGGGATGACCCCAAGAATCGTTCTAAGATCTTGTCCGAACAGTATGGTTGGGACAAGGATCTTGCCAAGAAAATCTGGTGTTTTGGACCTGAGACCACCGGGCCCAACATGGTGGTTGATATGTGTAAGGGAGTCCAATACTTGAATGAAATCAAGGATTCCGTGGTTGCTGGATTCCAGTGGGCATCAAAAGAAGGTGCTTTGTCCGAAGAAAATATGAGAGCCATCTGCTTTGAAGTATGTGATGTTGTCCTCCACACAGATGCTATTCACAGAGGAGGTGGTCAGATCATTCCTACTGCTAGGAGAGTCTTCTATGCCTCACAGCTGACTGCCAAACCCAGACTTCTTGAACCTGTTTACATGGTGGAAATCCAAGCTCCTGAGCAAGCTCTTGGTGGTATCTACAGTGTTCTTAATCAGAAGCGTGGACATGTCTTTGAAGAAATGCAGAGGCCTGGTACTCCACTTTACAACATCAAAGCATACCTTCCTGTCATTGAGTCCTTTGGATTCTCCAGCCAGTTGAGGGCCGCAACATCAGGGCAGGCATTCCCTCAGTGTGTGTTTGATCACTGGGATATGATGTCATCAGATCCATTGGAGGCTGGATCACAAGCTGCACAACTTGTGACCGATATTCGCAAGAGGAAGGGCTTGAAGGAGCAGATGACACCTCTCTCTGAGTTTGAAGATAAGCTTTAA
Protein sequence

>MsG0280009655.01.T01

MVKFTADELRRIMDYKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYEMSDDSLKSFKGERNGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCVEGCFLELQVDGEEAYQTFSRVIENANVIMATYEDPLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDETKMMERLWGENFFDPATKKWTTKNTGSATCKRGFVQFCYEPIKQVINTCMNDQKDKLWPMLTKLGITMKSEEKDLMGKPLMKRVMQTWLPASTALLEMMIFHLPSPSTAQRYRVENLYEGPLDDQYATAIRNCDPEGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNFVPGEKKDLYVKSVQRTVIWMGKRQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLERSCRTVMSKSPNKHNRLYMEARPLEDGLAEAIDEGTIGPRDDPKNRSKILSEQYGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALSEENMRAICFEVCDVVLHTDAIHRGGGQIIPTARRVFYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSSQLRAATSGQAFPQCVFDHWDMMSSDPLEAGSQAAQLVTDIRKRKGLKEQMTPLSEFEDKL*