AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280009845.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280009845.01.T01 MTR_2g072210 98.160 163 3 0 1 163 1 163 2.69e-115 323
MsG0280009845.01.T01 MTR_2g072210 96.319 163 3 1 1 163 1 160 6.42e-111 312
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280009845.01.T01 AT1G17080 57.407 162 57 5 4 163 3 154 1.28e-55 172
MsG0280009845.01.T01 AT1G53560 56.522 92 40 0 72 163 61 152 6.07e-33 114
MsG0280009845.01.T01 AT1G29970 45.775 142 64 3 31 163 21 158 1.79e-31 111
MsG0280009845.01.T01 AT1G29970 47.154 123 52 3 31 144 21 139 3.74e-25 98.6
MsG0280009845.01.T01 AT1G29970 35.326 184 64 4 31 163 21 200 1.06e-23 92.4
MsG0280009845.01.T01 AT3G14595 42.308 130 51 5 34 163 26 131 4.03e-23 89.0

Find 95 sgRNAs with CRISPR-Local

Find 322 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGGGTGGCCGGAGGAGGATT+TGG 0.218420 2:-59273931 None:intergenic
TGTTTGTGTTGGTGGGAGTT+GGG 0.222597 2:-59273886 None:intergenic
GTTAATAAAGCAAACAAAAT+TGG 0.238348 2:+59278484 MsG0280009845.01.T01:three_prime_UTR
TGTCCTTTGAAGGTTTATAA+TGG 0.309639 2:+59277477 MsG0280009845.01.T01:intron
ACCATCATTCAATGAATATA+TGG 0.314840 2:-59278339 None:intergenic
CTGCTATCCCGTGGTATGTT+GGG 0.316563 2:+59277512 MsG0280009845.01.T01:CDS
AGGATTAGGAGGTGGGAAAT+TGG 0.318146 2:-59274024 None:intergenic
TTGTTTGTGTTGGTGGGAGT+TGG 0.322630 2:-59273887 None:intergenic
TTGGTAGCCATGAGGATAAT+AGG 0.328820 2:-59274120 None:intergenic
GGGTGGCCGGAGGAGGATTT+GGG 0.332600 2:-59273930 None:intergenic
GTCCTTTGAAGGTTTATAAT+GGG 0.337243 2:+59277478 MsG0280009845.01.T01:intron
GCTACAATTGCGATTGTTCT+TGG 0.350694 2:+59278197 MsG0280009845.01.T01:CDS
CCGTACTGAGGAGGTGGAAC+TGG 0.351016 2:-59273984 None:intergenic
TGCTATAGGTAAATATAATC+AGG 0.364208 2:+59278451 MsG0280009845.01.T01:three_prime_UTR
CTGAGGAGGGTGGCCGGAGG+AGG 0.376077 2:-59273937 None:intergenic
GTGGGGTAAGGGCCAGGATT+AGG 0.376300 2:-59274038 None:intergenic
GTTTGTGTTGGTGGGAGTTG+GGG 0.380193 2:-59273885 None:intergenic
AATATAATCAGGGGTTTGTA+TGG 0.382289 2:+59278462 MsG0280009845.01.T01:three_prime_UTR
GAGGGGTCAGAGCCAGGTGG+GGG 0.382402 2:-59274083 None:intergenic
GGTGCAGAGGGGTCAGAGCC+AGG 0.397817 2:-59274089 None:intergenic
TCATGCTTAATAATATATAA+TGG 0.397818 2:-59278422 None:intergenic
CGACTTGGATGTTGTGGTAT+TGG 0.413318 2:+59275147 MsG0280009845.01.T01:CDS
ACAATTACAAGTTGCACATA+AGG 0.416901 2:-59278363 None:intergenic
CAGAGGGGTCAGAGCCAGGT+GGG 0.421667 2:-59274085 None:intergenic
GGATTTGGGTTTGTCGTGTT+CGG 0.423263 2:-59273916 None:intergenic
GGAAAACCAACGGTGGGGTA+AGG 0.445144 2:-59274050 None:intergenic
GGATGTTGTGGTATTGGTTG+TGG 0.445491 2:+59275153 MsG0280009845.01.T01:CDS
GCTGCTATCCCGTGGTATGT+TGG 0.446888 2:+59277511 MsG0280009845.01.T01:CDS
TGGTAGCCATGAGGATAATA+GGG 0.447767 2:-59274119 None:intergenic
TGGCTGAGGAGGGTGGCCGG+AGG 0.450023 2:-59273940 None:intergenic
AGAGGGGTCAGAGCCAGGTG+GGG 0.451199 2:-59274084 None:intergenic
TAAGGGCCAGGATTAGGAGG+TGG 0.458277 2:-59274032 None:intergenic
CGGTGGCTGAGGAGGGTGGC+CGG 0.464006 2:-59273943 None:intergenic
CCAACGGTGGGGTAAGGGCC+AGG 0.464366 2:-59274044 None:intergenic
GCAGAGGGGTCAGAGCCAGG+TGG 0.464629 2:-59274086 None:intergenic
AGGGGTCAGAGCCAGGTGGG+GGG 0.467235 2:-59274082 None:intergenic
GTCATGATTGTTTGTGTTGG+TGG 0.469086 2:-59273894 None:intergenic
GGGTAAGGGCCAGGATTAGG+AGG 0.471496 2:-59274035 None:intergenic
TAGGGAGGAGGAGGTGCAGA+GGG 0.471862 2:-59274101 None:intergenic
AATATATAATGGTGTGGAGC+AGG 0.474119 2:-59278411 None:intergenic
ATAGGGAGGAGGAGGTGCAG+AGG 0.477551 2:-59274102 None:intergenic
CGACAAATGTTGCAGATGAC+TGG 0.480503 2:+59278222 MsG0280009845.01.T01:CDS
TGAGATTGCGACGGTGGCTG+AGG 0.483696 2:-59273954 None:intergenic
TCATGATTGTTTGTGTTGGT+GGG 0.485920 2:-59273893 None:intergenic
ATCACTTACAGCGACTATAC+AGG 0.487361 2:-59277590 None:intergenic
AATTTCCCACCTCCTAATCC+TGG 0.492708 2:+59274026 MsG0280009845.01.T01:CDS
TTTGTGTTGGTGGGAGTTGG+GGG 0.492835 2:-59273884 None:intergenic
GTTGTGGTATTGGTTGTGGT+TGG 0.496278 2:+59275157 MsG0280009845.01.T01:CDS
AAGGAAGACCTGTGAGAGAA+AGG 0.505682 2:+59275124 MsG0280009845.01.T01:CDS
GAAAACCAACGGTGGGGTAA+GGG 0.506185 2:-59274049 None:intergenic
CCTGTGAGAGAAAGGCGACT+TGG 0.509311 2:+59275132 MsG0280009845.01.T01:CDS
ACTATACAGGCAATGTATCC+AGG 0.511183 2:-59277577 None:intergenic
CCTGGCCCTTACCCCACCGT+TGG 0.513242 2:+59274044 MsG0280009845.01.T01:CDS
CCTCCTCCCTATTATCCTCA+TGG 0.513720 2:+59274113 MsG0280009845.01.T01:CDS
TCGGTCATGATTGTTTGTGT+TGG 0.513810 2:-59273897 None:intergenic
GTGGGAAATTGGAGACGCCT+TGG 0.516092 2:-59274013 None:intergenic
CCTCAGTACGGCACTTTCCA+AGG 0.525136 2:+59273996 MsG0280009845.01.T01:CDS
CTGAGGAGGTGGAACTGGGA+AGG 0.526139 2:-59273979 None:intergenic
ATTGCGACGGTGGCTGAGGA+GGG 0.535444 2:-59273950 None:intergenic
TGAGGAGGTGGAACTGGGAA+GGG 0.536610 2:-59273978 None:intergenic
ACCATATATTCATTGAATGA+TGG 0.546223 2:+59278338 MsG0280009845.01.T01:three_prime_UTR
TCAGGTTATGCAGTTGCTGA+AGG 0.546401 2:+59275105 MsG0280009845.01.T01:intron
TGCTATCCCGTGGTATGTTG+GGG 0.548120 2:+59277513 MsG0280009845.01.T01:CDS
GAAAAGTACCGGGAAAAGCT+TGG 0.550353 2:-59274139 None:intergenic
GAAAGGCGACTTGGATGTTG+TGG 0.553400 2:+59275141 MsG0280009845.01.T01:CDS
CCAAGTCGCCTTTCTCTCAC+AGG 0.557326 2:-59275132 None:intergenic
GACAAACCCAAATCCTCCTC+CGG 0.558660 2:+59273924 MsG0280009845.01.T01:CDS
TGAGGATAATAGGGAGGAGG+AGG 0.562326 2:-59274110 None:intergenic
CGTACTGAGGAGGTGGAACT+GGG 0.564346 2:-59273983 None:intergenic
GCTATAGGTAAATATAATCA+GGG 0.567656 2:+59278452 MsG0280009845.01.T01:three_prime_UTR
GTAGACTATCGAGAGAAACC+TGG 0.568441 2:+59277559 MsG0280009845.01.T01:CDS
ATTATTGCCCCAACATACCA+CGG 0.577544 2:-59277520 None:intergenic
AAGGGTTGAGATTGCGACGG+TGG 0.580508 2:-59273960 None:intergenic
CCATGAGGATAATAGGGAGG+AGG 0.585242 2:-59274113 None:intergenic
GCGACGGTGGCTGAGGAGGG+TGG 0.586323 2:-59273947 None:intergenic
GATTGCGACGGTGGCTGAGG+AGG 0.588413 2:-59273951 None:intergenic
AAAGTGCCGTACTGAGGAGG+TGG 0.588556 2:-59273990 None:intergenic
TCTTTCTCGCTGCTATCCCG+TGG 0.593292 2:+59277503 MsG0280009845.01.T01:CDS
CTTAATAATATATAATGGTG+TGG 0.602195 2:-59278417 None:intergenic
GTATAAGTAAATCTCTCAGT+GGG 0.610396 2:-59278313 None:intergenic
AAGGGCCAGGATTAGGAGGT+GGG 0.611672 2:-59274031 None:intergenic
GGGTGAGGAAAACCAACGGT+GGG 0.619457 2:-59274056 None:intergenic
CCAGTTCCACCTCCTCAGTA+CGG 0.620974 2:+59273984 MsG0280009845.01.T01:CDS
TGGAAAGTGCCGTACTGAGG+AGG 0.621729 2:-59273993 None:intergenic
CCTTGGAAAGTGCCGTACTG+AGG 0.640611 2:-59273996 None:intergenic
TTATTGCCCCAACATACCAC+GGG 0.651239 2:-59277519 None:intergenic
AGGGTGAGGAAAACCAACGG+TGG 0.658204 2:-59274057 None:intergenic
GACAGGGTGAGGAAAACCAA+CGG 0.678864 2:-59274060 None:intergenic
GGTGAGGAAAACCAACGGTG+GGG 0.680812 2:-59274055 None:intergenic
TGTATAAGTAAATCTCTCAG+TGG 0.682647 2:-59278314 None:intergenic
AGGGAGGAGGAGGTGCAGAG+GGG 0.686999 2:-59274100 None:intergenic
GGGAAGGGTTGAGATTGCGA+CGG 0.693553 2:-59273963 None:intergenic
GGAAAAGCTTGGTAGCCATG+AGG 0.706009 2:-59274128 None:intergenic
CTATAGGTAAATATAATCAG+GGG 0.723055 2:+59278453 MsG0280009845.01.T01:three_prime_UTR
TAGCCATGAGGATAATAGGG+AGG 0.723951 2:-59274116 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAATAAAAAAATAAAA+AGG - Chr2:59277420-59277439 None:intergenic 0.0%
!! ACCAAATAAATAAATAAAAT+AGG - Chr2:59274608-59274627 None:intergenic 10.0%
!! ATAAAATGCAAATATAAAAA+AGG - Chr2:59276094-59276113 None:intergenic 10.0%
!! TTATATAAGAAAAAAGATAA+AGG - Chr2:59276288-59276307 None:intergenic 10.0%
!!! CATTTTATTTTATATTTTTG+TGG + Chr2:59275585-59275604 MsG0280009845.01.T01:intron 10.0%
!!! CTTATTTTTTTTAATTTTGA+TGG + Chr2:59275750-59275769 MsG0280009845.01.T01:intron 10.0%
!!! GAGTTTATTTTATTTTTTAT+TGG + Chr2:59274174-59274193 MsG0280009845.01.T01:intron 10.0%
!! AAAAATATTTCAATTTGAGA+GGG + Chr2:59275934-59275953 MsG0280009845.01.T01:intron 15.0%
!! AAGTGATTAATTATATATGT+TGG + Chr2:59277869-59277888 MsG0280009845.01.T01:intron 15.0%
!! TATTTGTGATGTAATATATT+TGG + Chr2:59274462-59274481 MsG0280009845.01.T01:intron 15.0%
!! TCAGCTATTATAAATTTAAT+AGG - Chr2:59276608-59276627 None:intergenic 15.0%
!! TCATGCTTAATAATATATAA+TGG - Chr2:59278425-59278444 None:intergenic 15.0%
!! TTAACATTTCAAAATTCTAT+TGG - Chr2:59275720-59275739 None:intergenic 15.0%
!!! AAAAATAATATCTCAGATTT+TGG - Chr2:59276374-59276393 None:intergenic 15.0%
!!! ATGGAAAATTGATTTTTTTT+AGG + Chr2:59274218-59274237 MsG0280009845.01.T01:intron 15.0%
!!! ATTTTTTTTAATTTTGATGG+TGG + Chr2:59275753-59275772 MsG0280009845.01.T01:intron 15.0%
!!! GCCTATTTTATTTATTTATT+TGG + Chr2:59274604-59274623 MsG0280009845.01.T01:intron 15.0%
!!! GTTAAAATAATTGATTTTGA+AGG + Chr2:59274946-59274965 MsG0280009845.01.T01:intron 15.0%
!!! TATTTTAGGGTTTTAATTTA+GGG + Chr2:59274582-59274601 MsG0280009845.01.T01:intron 15.0%
!!! TGGAAAATTGATTTTTTTTA+GGG + Chr2:59274219-59274238 MsG0280009845.01.T01:intron 15.0%
!!! TTATTGCTTATTGAAATTTT+TGG + Chr2:59277992-59278011 MsG0280009845.01.T01:intron 15.0%
!!! TTATTTAGGGTTTTAATTTA+GGG + Chr2:59274256-59274275 MsG0280009845.01.T01:intron 15.0%
!!! TTATTTTAGGGTTTTAATTT+AGG + Chr2:59274581-59274600 MsG0280009845.01.T01:intron 15.0%
!!! TTTATTTAGGGTTTTAATTT+AGG + Chr2:59274255-59274274 MsG0280009845.01.T01:intron 15.0%
!!! TTTTACAGTATTTATTTTGT+GGG + Chr2:59274314-59274333 MsG0280009845.01.T01:intron 15.0%
!!! TTTTATTTTTTATTGGGTTT+TGG + Chr2:59274181-59274200 MsG0280009845.01.T01:intron 15.0%
!!! TTTTCTTCGTTTTTTATTTA+GGG + Chr2:59274243-59274262 MsG0280009845.01.T01:intron 15.0%
!!! TTTTTACAGTATTTATTTTG+TGG + Chr2:59274313-59274332 MsG0280009845.01.T01:intron 15.0%
!!! TTTTTCCTTTTGATATTTTT+GGG + Chr2:59275680-59275699 MsG0280009845.01.T01:intron 15.0%
!!! TTTTTTCCTTTTGATATTTT+TGG + Chr2:59275679-59275698 MsG0280009845.01.T01:intron 15.0%
!! AAAACCTAAATGCATAAAAT+CGG - Chr2:59276402-59276421 None:intergenic 20.0%
!! AAATAAACTCTAAATAGAAC+AGG - Chr2:59274164-59274183 None:intergenic 20.0%
!! AATACAAGTAATTCAAACAA+TGG - Chr2:59278082-59278101 None:intergenic 20.0%
!! ATACACAAAAATCTAAACAA+AGG - Chr2:59277124-59277143 None:intergenic 20.0%
!! CAAAATCCTTAATAAAAAAC+AGG - Chr2:59275358-59275377 None:intergenic 20.0%
!! CTTAATAATATATAATGGTG+TGG - Chr2:59278420-59278439 None:intergenic 20.0%
!! GAAAAATATTTCAATTTGAG+AGG + Chr2:59275933-59275952 MsG0280009845.01.T01:intron 20.0%
!! GATAATATTCAAACAAGTAA+TGG - Chr2:59277675-59277694 None:intergenic 20.0%
!! GTCAAATTAAAATTGAAAAG+TGG - Chr2:59277383-59277402 None:intergenic 20.0%
!! TCAAAGGACAAAAAATTATA+AGG - Chr2:59277467-59277486 None:intergenic 20.0%
!!! AATTCAAATTTTCCATTTTC+AGG - Chr2:59274294-59274313 None:intergenic 20.0%
!!! ACAGTGGAATTTTTTATTTT+AGG + Chr2:59274568-59274587 MsG0280009845.01.T01:intron 20.0%
!!! CAGTGGAATTTTTTATTTTA+GGG + Chr2:59274569-59274588 MsG0280009845.01.T01:intron 20.0%
!!! CTTTTCTTCGTTTTTTATTT+AGG + Chr2:59274242-59274261 MsG0280009845.01.T01:intron 20.0%
!!! GAGTTCTTTTTTTAATTTCT+GGG + Chr2:59274656-59274675 MsG0280009845.01.T01:intron 20.0%
!!! GTTGTTGTTTATAAAGATAA+AGG + Chr2:59276524-59276543 MsG0280009845.01.T01:intron 20.0%
!!! TACATAACTATAGCTTTAAA+TGG - Chr2:59275297-59275316 None:intergenic 20.0%
!!! TATAATTTTTTGTCCTTTGA+AGG + Chr2:59277467-59277486 MsG0280009845.01.T01:intron 20.0%
!!! TCTTTGATTTTAACTATTCA+GGG + Chr2:59275447-59275466 MsG0280009845.01.T01:intron 20.0%
!!! TGTAATATATTTGGTTTTGA+AGG + Chr2:59274471-59274490 MsG0280009845.01.T01:intron 20.0%
!!! TTCTTTGATTTTAACTATTC+AGG + Chr2:59275446-59275465 MsG0280009845.01.T01:intron 20.0%
! ACCATATATTCATTGAATGA+TGG + Chr2:59278338-59278357 MsG0280009845.01.T01:three_prime_UTR 25.0%
! ACCATCATTCAATGAATATA+TGG - Chr2:59278342-59278361 None:intergenic 25.0%
! ATCCACAAACATAAAATTGA+TGG - Chr2:59275546-59275565 None:intergenic 25.0%
! CAAATATCAGTTCAAAATAG+TGG - Chr2:59276941-59276960 None:intergenic 25.0%
! CGTTACATTTCAAATGAAAA+TGG + Chr2:59276903-59276922 MsG0280009845.01.T01:intron 25.0%
! CTATAGGTAAATATAATCAG+GGG + Chr2:59278453-59278472 MsG0280009845.01.T01:three_prime_UTR 25.0%
! GAAGAATATTACAATTTGAG+AGG + Chr2:59276694-59276713 MsG0280009845.01.T01:intron 25.0%
! GCTATAGGTAAATATAATCA+GGG + Chr2:59278452-59278471 MsG0280009845.01.T01:three_prime_UTR 25.0%
! GGTGTAGTTAACATATATAA+TGG - Chr2:59275525-59275544 None:intergenic 25.0%
! TAAAAAGGTAAAAATGACAC+AGG - Chr2:59277405-59277424 None:intergenic 25.0%
! TAAGTATGAGAAATTGAGAA+TGG + Chr2:59278113-59278132 MsG0280009845.01.T01:intron 25.0%
! TAGATAACTATATGTGAAGT+TGG + Chr2:59275252-59275271 MsG0280009845.01.T01:intron 25.0%
! TGCTATAGGTAAATATAATC+AGG + Chr2:59278451-59278470 MsG0280009845.01.T01:three_prime_UTR 25.0%
! TGCTATATATAAACTGAAAC+AGG - Chr2:59277643-59277662 None:intergenic 25.0%
! TGGTCATCATAGTATTAAAT+TGG + Chr2:59276212-59276231 MsG0280009845.01.T01:intron 25.0%
! TTAGTGTTAAGTTTAGTAGA+GGG + Chr2:59275044-59275063 MsG0280009845.01.T01:intron 25.0%
! TTCTCAATTTCTCATACTTA+TGG - Chr2:59278113-59278132 None:intergenic 25.0%
! TTTAGTGTTAAGTTTAGTAG+AGG + Chr2:59275043-59275062 MsG0280009845.01.T01:intron 25.0%
!! ACATTTTCTCAAATTACTAC+CGG - Chr2:59274803-59274822 None:intergenic 25.0%
!! TAATTTCTGGGTTCAAATAT+TGG + Chr2:59274668-59274687 MsG0280009845.01.T01:intron 25.0%
!! TGCAAATATAAAAAAGGTGT+AGG - Chr2:59276088-59276107 None:intergenic 25.0%
!! TTTTATGTTGTAGAATACGA+TGG + Chr2:59275010-59275029 MsG0280009845.01.T01:intron 25.0%
!!! AAAAGTATTCTCTCATTTCA+TGG - Chr2:59275384-59275403 None:intergenic 25.0%
!!! ACTGAGATGTTTTAAGTTAA+AGG + Chr2:59276564-59276583 MsG0280009845.01.T01:intron 25.0%
!!! AGAAATATCTGTTTTTAACC+AGG - Chr2:59276465-59276484 None:intergenic 25.0%
!!! ATATTTTGATGATCTGTGTT+GGG + Chr2:59274342-59274361 MsG0280009845.01.T01:intron 25.0%
!!! ATCTCAGTTTTTAGATCAAA+AGG - Chr2:59276552-59276571 None:intergenic 25.0%
!!! GGAGTTCTTTTTTTAATTTC+TGG + Chr2:59274655-59274674 MsG0280009845.01.T01:intron 25.0%
!!! TATATTTTGATGATCTGTGT+TGG + Chr2:59274341-59274360 MsG0280009845.01.T01:intron 25.0%
!!! TCTCAGTTTTTAGATCAAAA+GGG - Chr2:59276551-59276570 None:intergenic 25.0%
!!! TGAGTTGACATTTTATTTCT+TGG + Chr2:59274924-59274943 MsG0280009845.01.T01:intron 25.0%
!!! TTTCTTTTCACAGTTTTGAA+CGG + Chr2:59276480-59276499 MsG0280009845.01.T01:intron 25.0%
!!! TTTGGTTTTTAGCTTGAAAA+TGG + Chr2:59274199-59274218 MsG0280009845.01.T01:intron 25.0%
AAAAAACAAATACCCAACCA+AGG - Chr2:59277200-59277219 None:intergenic 30.0%
AAAAATTCAAAGCAGATTGC+TGG - Chr2:59276044-59276063 None:intergenic 30.0%
AAATTTGTCTATTGTGCATG+AGG + Chr2:59275623-59275642 MsG0280009845.01.T01:intron 30.0%
AACCCATTATAAACCTTCAA+AGG - Chr2:59277483-59277502 None:intergenic 30.0%
AATATAATCAGGGGTTTGTA+TGG + Chr2:59278462-59278481 MsG0280009845.01.T01:three_prime_UTR 30.0%
ACAATGGATACATGTTTGAT+CGG + Chr2:59274868-59274887 MsG0280009845.01.T01:intron 30.0%
ACAATTACAAGTTGCACATA+AGG - Chr2:59278366-59278385 None:intergenic 30.0%
AGATCAGAAAATTGAAACAC+GGG - Chr2:59277314-59277333 None:intergenic 30.0%
ATCAACACTTCAAATTGAAG+AGG - Chr2:59277959-59277978 None:intergenic 30.0%
ATGCACAATAGACAAATTTG+AGG - Chr2:59275622-59275641 None:intergenic 30.0%
CAAAAATCTAAACAAAGGCA+TGG - Chr2:59277119-59277138 None:intergenic 30.0%
CAAGTGAAAAAATGAAAGGA+TGG - Chr2:59277617-59277636 None:intergenic 30.0%
CTTCTGATTGTACTGTTAAA+AGG + Chr2:59276132-59276151 MsG0280009845.01.T01:intron 30.0%
GAGAAAATGTCAATCGTAAA+TGG - Chr2:59277348-59277367 None:intergenic 30.0%
GAGATCAGAAAATTGAAACA+CGG - Chr2:59277315-59277334 None:intergenic 30.0%
GCTTCAAGTGAAAAAATGAA+AGG - Chr2:59277621-59277640 None:intergenic 30.0%
GTAATCTTAAGCTGAGAAAT+TGG + Chr2:59275787-59275806 MsG0280009845.01.T01:intron 30.0%
GTATAAGTAAATCTCTCAGT+GGG - Chr2:59278316-59278335 None:intergenic 30.0%
TAACAGTACAATCAGAAGAT+GGG - Chr2:59276130-59276149 None:intergenic 30.0%
TATACTATTTCACTTCACAC+TGG + Chr2:59277141-59277160 MsG0280009845.01.T01:intron 30.0%
TATCTTTCTGAATGTCAACA+AGG + Chr2:59276319-59276338 MsG0280009845.01.T01:intron 30.0%
TCCTTAATAAAAAACAGGCT+AGG - Chr2:59275353-59275372 None:intergenic 30.0%
TCGAGATTAGATTTAGTAGT+AGG + Chr2:59274719-59274738 MsG0280009845.01.T01:intron 30.0%
TGACAAGTGAAATATGTATG+TGG - Chr2:59275485-59275504 None:intergenic 30.0%
TGCTCATATACTTCTTTCTA+TGG - Chr2:59277734-59277753 None:intergenic 30.0%
TGTATAAGTAAATCTCTCAG+TGG - Chr2:59278317-59278336 None:intergenic 30.0%
TTAACAGTACAATCAGAAGA+TGG - Chr2:59276131-59276150 None:intergenic 30.0%
TTACTATACAACCAGAAACA+AGG - Chr2:59276429-59276448 None:intergenic 30.0%
TTGAATGTAACAATGTGTGT+CGG + Chr2:59274828-59274847 MsG0280009845.01.T01:intron 30.0%
TTTAGTGTTGTAGAATACAG+TGG + Chr2:59274552-59274571 MsG0280009845.01.T01:intron 30.0%
! AAATAGAACAGGAAAAGTAC+CGG - Chr2:59274153-59274172 None:intergenic 30.0%
! AAGTCTGGGATTTAAAAGAA+AGG - Chr2:59277020-59277039 None:intergenic 30.0%
! CAATTTTCACCTAACTATAG+AGG + Chr2:59277255-59277274 MsG0280009845.01.T01:intron 30.0%
! CACCATCAATTTTATGTTTG+TGG + Chr2:59275541-59275560 MsG0280009845.01.T01:intron 30.0%
! CATTTGAAATGTAACGTCAA+AGG - Chr2:59276899-59276918 None:intergenic 30.0%
! GTCCTTTGAAGGTTTATAAT+GGG + Chr2:59277478-59277497 MsG0280009845.01.T01:intron 30.0%
! TAGAAAGAAGTATATGAGCA+AGG + Chr2:59277734-59277753 MsG0280009845.01.T01:intron 30.0%
! TGTCCTTTGAAGGTTTATAA+TGG + Chr2:59277477-59277496 MsG0280009845.01.T01:intron 30.0%
! TGTGAATTGATGATTGAGAT+GGG - Chr2:59275999-59276018 None:intergenic 30.0%
! TGTGAGTTTATGTTTGAGAT+GGG - Chr2:59276762-59276781 None:intergenic 30.0%
! TTGTCCGATTTTATGCATTT+AGG + Chr2:59276395-59276414 MsG0280009845.01.T01:intron 30.0%
! TTTTAGCAATTTGCGTCAAT+TGG + Chr2:59276060-59276079 MsG0280009845.01.T01:intron 30.0%
!! GAACCTTGAAATTAAGTTGA+AGG - Chr2:59276257-59276276 None:intergenic 30.0%
!! TTGATGATGATGAATGATCA+GGG + Chr2:59274494-59274513 MsG0280009845.01.T01:intron 30.0%
!!! ATTTGGTTTGATTTTGAGCT+CGG + Chr2:59274621-59274640 MsG0280009845.01.T01:intron 30.0%
!!! CTTTTGATATTTTTGGGCTA+GGG + Chr2:59275686-59275705 MsG0280009845.01.T01:intron 30.0%
!!! TCCTAGCCTGTTTTTTATTA+AGG + Chr2:59275349-59275368 MsG0280009845.01.T01:intron 30.0%
AACGTCAAAGGAGATTAGAA+GGG - Chr2:59276887-59276906 None:intergenic 35.0%
AACTCACACCTTTGTGAAAA+AGG + Chr2:59276774-59276793 MsG0280009845.01.T01:intron 35.0%
AATAGGAAAAACTGCATCAG+AGG - Chr2:59276591-59276610 None:intergenic 35.0%
AATATATAATGGTGTGGAGC+AGG - Chr2:59278414-59278433 None:intergenic 35.0%
AATTTGAGAGGAAGAGAAGA+GGG + Chr2:59276706-59276725 MsG0280009845.01.T01:intron 35.0%
ACTTCTTTCTATGGTGTACT+TGG - Chr2:59277725-59277744 None:intergenic 35.0%
AGCTGAGAAATTGGTCATTA+TGG + Chr2:59275796-59275815 MsG0280009845.01.T01:intron 35.0%
CCTAGCCCAAAAATATCAAA+AGG - Chr2:59275688-59275707 None:intergenic 35.0%
CTTCTTTCTATGGTGTACTT+GGG - Chr2:59277724-59277743 None:intergenic 35.0%
GAAAAGTTTCTTATGAAGCC+GGG + Chr2:59274756-59274775 MsG0280009845.01.T01:intron 35.0%
GAAAATTCAAAGCAGATTGC+TGG - Chr2:59276807-59276826 None:intergenic 35.0%
GAAAATTGAAATGATCCACC+TGG - Chr2:59277243-59277262 None:intergenic 35.0%
GGAAAAGTTTCTTATGAAGC+CGG + Chr2:59274755-59274774 MsG0280009845.01.T01:intron 35.0%
GGTCCTTCAACTTAATTTCA+AGG + Chr2:59276251-59276270 MsG0280009845.01.T01:intron 35.0%
GTGGATAGTTTCATTGACAA+CGG + Chr2:59275560-59275579 MsG0280009845.01.T01:intron 35.0%
GTGTGAGTTTATGTTTGAGA+TGG - Chr2:59276763-59276782 None:intergenic 35.0%
TAACGTCAAAGGAGATTAGA+AGG - Chr2:59276888-59276907 None:intergenic 35.0%
TAACTGTGTCAAAGAAGTCT+GGG - Chr2:59277034-59277053 None:intergenic 35.0%
TCACATTTCTCCACGTAATT+CGG - Chr2:59277064-59277083 None:intergenic 35.0%
TGGGTTCAAATATTGGATGT+TGG + Chr2:59274675-59274694 MsG0280009845.01.T01:intron 35.0%
TGTCTAACTCCTACATGTAT+TGG + Chr2:59277892-59277911 MsG0280009845.01.T01:intron 35.0%
TGTTGGGTTTGATCAAAGAT+TGG + Chr2:59274358-59274377 MsG0280009845.01.T01:intron 35.0%
TTAACAGATACCGAATTACG+TGG + Chr2:59277051-59277070 MsG0280009845.01.T01:intron 35.0%
TTAACTGTGTCAAAGAAGTC+TGG - Chr2:59277035-59277054 None:intergenic 35.0%
TTCACCTAACTATAGAGGAA+TGG + Chr2:59277260-59277279 MsG0280009845.01.T01:intron 35.0%
TTGATCAAAGATTGGAACTC+TGG + Chr2:59274366-59274385 MsG0280009845.01.T01:intron 35.0%
TTTCAGCAGTTTGTGTCAAT+TGG + Chr2:59276823-59276842 MsG0280009845.01.T01:intron 35.0%
! AAGCATGACTTTTGTGCTAT+AGG + Chr2:59278437-59278456 MsG0280009845.01.T01:three_prime_UTR 35.0%
! AATTCACAGCTTTGTGAGAA+AGG + Chr2:59276011-59276030 MsG0280009845.01.T01:intron 35.0%
! ATTGGAACTCTGGTGATTTT+TGG + Chr2:59274376-59274395 MsG0280009845.01.T01:intron 35.0%
! CTGTGAATTGATGATTGAGA+TGG - Chr2:59276000-59276019 None:intergenic 35.0%
! TCATGATTGTTTGTGTTGGT+GGG - Chr2:59273896-59273915 None:intergenic 35.0%
!! AATAGAACAGGAAAAGTACC+GGG - Chr2:59274152-59274171 None:intergenic 35.0%
!! AGATTGTTGTTTGGGTTTAG+GGG + Chr2:59274412-59274431 MsG0280009845.01.T01:intron 35.0%
!! AGGTTTTTGTTCCTTGTTTC+TGG + Chr2:59276415-59276434 MsG0280009845.01.T01:intron 35.0%
!! GAGATTGTTGTTTGGGTTTA+GGG + Chr2:59274411-59274430 MsG0280009845.01.T01:intron 35.0%
!! GTTGATGATGATGAATGATC+AGG + Chr2:59274493-59274512 MsG0280009845.01.T01:intron 35.0%
!! TAGTGGACTAGTATTGACAT+AGG - Chr2:59277697-59277716 None:intergenic 35.0%
!! TGAAGGTTGATGAATGATCA+GGG + Chr2:59274963-59274982 MsG0280009845.01.T01:intron 35.0%
!! TGAGATTGTTGTTTGGGTTT+AGG + Chr2:59274410-59274429 MsG0280009845.01.T01:intron 35.0%
!! TTGAAGGTTGATGAATGATC+AGG + Chr2:59274962-59274981 MsG0280009845.01.T01:intron 35.0%
!!! CCTTTTGATATTTTTGGGCT+AGG + Chr2:59275685-59275704 MsG0280009845.01.T01:intron 35.0%
!!! CTTGTTTTTGAGCCTGAAAA+TGG + Chr2:59274279-59274298 MsG0280009845.01.T01:intron 35.0%
!!! TCTCAGATTTTGGTTTGAGA+CGG - Chr2:59276364-59276383 None:intergenic 35.0%
AAATTGGCAAAACTGCACCA+GGG + Chr2:59276228-59276247 MsG0280009845.01.T01:intron 40.0%
AATCGTAAATGGTTCCAGCA+TGG - Chr2:59277337-59277356 None:intergenic 40.0%
ACACCAACACTTCAGATTGA+CGG - Chr2:59277923-59277942 None:intergenic 40.0%
ACGGAATGTCCAATACATGT+AGG - Chr2:59277904-59277923 None:intergenic 40.0%
ACGTCAAAGGAGATTAGAAG+GGG - Chr2:59276886-59276905 None:intergenic 40.0%
ACTATACAGGCAATGTATCC+AGG - Chr2:59277580-59277599 None:intergenic 40.0%
AGTAATGCTTTCAGTCATCC+TGG + Chr2:59276444-59276463 MsG0280009845.01.T01:intron 40.0%
AGTACAATCAGAAGATGGGA+AGG - Chr2:59276126-59276145 None:intergenic 40.0%
AGTAGTAGGTCAACTCTCTT+AGG + Chr2:59274733-59274752 MsG0280009845.01.T01:intron 40.0%
ATAGAGGAATGGTGTGGATA+TGG + Chr2:59277271-59277290 MsG0280009845.01.T01:intron 40.0%
ATCACTTACAGCGACTATAC+AGG - Chr2:59277593-59277612 None:intergenic 40.0%
ATTATTGCCCCAACATACCA+CGG - Chr2:59277523-59277542 None:intergenic 40.0%
ATTCAAAGCAGATTGCTGGA+AGG - Chr2:59276040-59276059 None:intergenic 40.0%
CAATTTGAGAGGAAGAGAAG+AGG + Chr2:59276705-59276724 MsG0280009845.01.T01:intron 40.0%
CACACCATTCCTCTATAGTT+AGG - Chr2:59277267-59277286 None:intergenic 40.0%
CTAACTATAGAGGAATGGTG+TGG + Chr2:59277265-59277284 MsG0280009845.01.T01:intron 40.0%
GAAAGTAGTATTTCCTGCCT+TGG + Chr2:59277180-59277199 MsG0280009845.01.T01:intron 40.0%
GAAGTATATGAGCAAGGAGT+GGG + Chr2:59277740-59277759 MsG0280009845.01.T01:intron 40.0%
GATGAATGATCAGGGATTCA+TGG + Chr2:59274971-59274990 MsG0280009845.01.T01:intron 40.0%
GCTACAATTGCGATTGTTCT+TGG + Chr2:59278197-59278216 MsG0280009845.01.T01:CDS 40.0%
GTACAATCAGAAGATGGGAA+GGG - Chr2:59276125-59276144 None:intergenic 40.0%
GTAGTAGGTCAACTCTCTTA+GGG + Chr2:59274734-59274753 MsG0280009845.01.T01:intron 40.0%
GTCATGATTGTTTGTGTTGG+TGG - Chr2:59273897-59273916 None:intergenic 40.0%
TAAATTGGCAAAACTGCACC+AGG + Chr2:59276227-59276246 MsG0280009845.01.T01:intron 40.0%
TAGTATTTCCTGCCTTGGTT+GGG + Chr2:59277185-59277204 MsG0280009845.01.T01:intron 40.0%
TCAATTTGAGAGGGAGATGA+GGG + Chr2:59275943-59275962 MsG0280009845.01.T01:intron 40.0%
TCGGTCATGATTGTTTGTGT+TGG - Chr2:59273900-59273919 None:intergenic 40.0%
TGGTAGCCATGAGGATAATA+GGG - Chr2:59274122-59274141 None:intergenic 40.0%
TGGTGTACTTGGGTAATTAG+TGG - Chr2:59277714-59277733 None:intergenic 40.0%
TTCAAAGCAGATTGCTGGAA+GGG - Chr2:59276039-59276058 None:intergenic 40.0%
TTCAATTTGAGAGGGAGATG+AGG + Chr2:59275942-59275961 MsG0280009845.01.T01:intron 40.0%
TTGAGATGGGTCTCATGAAA+TGG - Chr2:59275986-59276005 None:intergenic 40.0%
TTGAGCTCGGAATGGAATAA+TGG + Chr2:59274634-59274653 MsG0280009845.01.T01:intron 40.0%
! ACGATAAGTGTTGTCAATCG+TGG - Chr2:59275892-59275911 None:intergenic 40.0%
! AGAAGTATATGAGCAAGGAG+TGG + Chr2:59277739-59277758 MsG0280009845.01.T01:intron 40.0%
! ATTCCGTCAATCTGAAGTGT+TGG + Chr2:59277917-59277936 MsG0280009845.01.T01:intron 40.0%
! CAATTTTCTGATCTCCATGC+TGG + Chr2:59277320-59277339 MsG0280009845.01.T01:intron 40.0%
! GTATGATGAGTTGAGCGAAT+TGG + Chr2:59276192-59276211 MsG0280009845.01.T01:intron 40.0%
! GTTGTGTGTGAGATTGATTC+AGG + Chr2:59275087-59275106 MsG0280009845.01.T01:intron 40.0%
! TTGGTAGCCATGAGGATAAT+AGG - Chr2:59274123-59274142 None:intergenic 40.0%
!! CAGCTGTGAGATTGTTGTTT+GGG + Chr2:59274404-59274423 MsG0280009845.01.T01:intron 40.0%
!! GTTTGATTTTGAGCTCGGAA+TGG + Chr2:59274626-59274645 MsG0280009845.01.T01:intron 40.0%
AACAAATACCCAACCAAGGC+AGG - Chr2:59277196-59277215 None:intergenic 45.0%
AAGGAAGACCTGTGAGAGAA+AGG + Chr2:59275124-59275143 MsG0280009845.01.T01:CDS 45.0%
AATTGGCAAAACTGCACCAG+GGG + Chr2:59276229-59276248 MsG0280009845.01.T01:intron 45.0%
AATTTCCCACCTCCTAATCC+TGG + Chr2:59274026-59274045 MsG0280009845.01.T01:CDS 45.0%
ACACACTGACATGTTGACAC+CGG + Chr2:59274781-59274800 MsG0280009845.01.T01:intron 45.0%
AGAGGAAGAGAAGAGGGAAA+TGG + Chr2:59276712-59276731 MsG0280009845.01.T01:intron 45.0%
AGGATTAGGAGGTGGGAAAT+TGG - Chr2:59274027-59274046 None:intergenic 45.0%
CGACAAATGTTGCAGATGAC+TGG + Chr2:59278222-59278241 MsG0280009845.01.T01:CDS 45.0%
CGTCAAAGGAGATTAGAAGG+GGG - Chr2:59276885-59276904 None:intergenic 45.0%
GTAGACTATCGAGAGAAACC+TGG + Chr2:59277559-59277578 MsG0280009845.01.T01:CDS 45.0%
GTAGTATTTCCTGCCTTGGT+TGG + Chr2:59277184-59277203 MsG0280009845.01.T01:intron 45.0%
GTTGTGTCAGTGTCAGACAA+TGG + Chr2:59274852-59274871 MsG0280009845.01.T01:intron 45.0%
TAGCCATGAGGATAATAGGG+AGG - Chr2:59274119-59274138 None:intergenic 45.0%
TCAAAGCAGATTGCTGGAAG+GGG - Chr2:59276038-59276057 None:intergenic 45.0%
TCAGGTTATGCAGTTGCTGA+AGG + Chr2:59275105-59275124 MsG0280009845.01.T01:intron 45.0%
TTATTGCCCCAACATACCAC+GGG - Chr2:59277522-59277541 None:intergenic 45.0%
TTGAGATGGGTCTCACGAAA+TGG - Chr2:59276749-59276768 None:intergenic 45.0%
! CGACTTGGATGTTGTGGTAT+TGG + Chr2:59275147-59275166 MsG0280009845.01.T01:CDS 45.0%
! GCAGCTGTGAGATTGTTGTT+TGG + Chr2:59274403-59274422 MsG0280009845.01.T01:intron 45.0%
! GGATTTGGGTTTGTCGTGTT+CGG - Chr2:59273919-59273938 None:intergenic 45.0%
! TGTTTGTGTTGGTGGGAGTT+GGG - Chr2:59273889-59273908 None:intergenic 45.0%
! TTGTTTGTGTTGGTGGGAGT+TGG - Chr2:59273890-59273909 None:intergenic 45.0%
! TTTGCTGTAGCATATGTCGC+TGG + Chr2:59275417-59275436 MsG0280009845.01.T01:intron 45.0%
!! AATTAAGTTGAAGGACCCCC+TGG - Chr2:59276248-59276267 None:intergenic 45.0%
!! ACTGCTTTTGCAGGCAATTG+TGG + Chr2:59278175-59278194 MsG0280009845.01.T01:intron 45.0%
!! GAAAAGTACCGGGAAAAGCT+TGG - Chr2:59274142-59274161 None:intergenic 45.0%
!! GAAGGTGGCCTTTTTCACAA+AGG - Chr2:59276785-59276804 None:intergenic 45.0%
!! GGATGTTGTGGTATTGGTTG+TGG + Chr2:59275153-59275172 MsG0280009845.01.T01:CDS 45.0%
!! GTCAATCTGAAGTGTTGGTG+TGG + Chr2:59277922-59277941 MsG0280009845.01.T01:intron 45.0%
!! GTTGTGGTATTGGTTGTGGT+TGG + Chr2:59275157-59275176 MsG0280009845.01.T01:CDS 45.0%
!! TTTTGTGCGACTGCTTTTGC+AGG + Chr2:59278166-59278185 MsG0280009845.01.T01:intron 45.0%
!!! AGTTTATTTTATTTTTTATT+GGG + Chr2:59274175-59274194 MsG0280009845.01.T01:intron 5.0%
!!! ATTTTATTTTATATTTTTGT+GGG + Chr2:59275586-59275605 MsG0280009845.01.T01:intron 5.0%
ATTGGCAAAACTGCACCAGG+GGG + Chr2:59276230-59276249 MsG0280009845.01.T01:intron 50.0%
CAAAGCAGATTGCTGGAAGG+TGG - Chr2:59276037-59276056 None:intergenic 50.0%
CAACATGTCAGTGTGTGTCC+CGG - Chr2:59274777-59274796 None:intergenic 50.0%
CCATGAGGATAATAGGGAGG+AGG - Chr2:59274116-59274135 None:intergenic 50.0%
CCTCCTCCCTATTATCCTCA+TGG + Chr2:59274113-59274132 MsG0280009845.01.T01:CDS 50.0%
CTGCTATCCCGTGGTATGTT+GGG + Chr2:59277512-59277531 MsG0280009845.01.T01:CDS 50.0%
GAAAACCAACGGTGGGGTAA+GGG - Chr2:59274052-59274071 None:intergenic 50.0%
GACAAACCCAAATCCTCCTC+CGG + Chr2:59273924-59273943 MsG0280009845.01.T01:CDS 50.0%
GACAGGGTGAGGAAAACCAA+CGG - Chr2:59274063-59274082 None:intergenic 50.0%
TCCACCTGGTGCAAGTTAGT+TGG - Chr2:59277229-59277248 None:intergenic 50.0%
TGAGAGGGAGATGAGGGAAA+TGG + Chr2:59275949-59275968 MsG0280009845.01.T01:intron 50.0%
TGAGGATAATAGGGAGGAGG+AGG - Chr2:59274113-59274132 None:intergenic 50.0%
TGCTATCCCGTGGTATGTTG+GGG + Chr2:59277513-59277532 MsG0280009845.01.T01:CDS 50.0%
! AACAGGCTAGGAGCATAGCA+TGG - Chr2:59275341-59275360 None:intergenic 50.0%
! AGTGCCAACTAACTTGCACC+AGG + Chr2:59277222-59277241 MsG0280009845.01.T01:intron 50.0%
! CATGGCTACCAAGCTTTTCC+CGG + Chr2:59274131-59274150 MsG0280009845.01.T01:CDS 50.0%
! GAAAGGCGACTTGGATGTTG+TGG + Chr2:59275141-59275160 MsG0280009845.01.T01:CDS 50.0%
! GGAAAAGCTTGGTAGCCATG+AGG - Chr2:59274131-59274150 None:intergenic 50.0%
! GTTTGTGTTGGTGGGAGTTG+GGG - Chr2:59273888-59273907 None:intergenic 50.0%
! TTTGTGTTGGTGGGAGTTGG+GGG - Chr2:59273887-59273906 None:intergenic 50.0%
AAGGGCCAGGATTAGGAGGT+GGG - Chr2:59274034-59274053 None:intergenic 55.0%
AAGGGTTGAGATTGCGACGG+TGG - Chr2:59273963-59273982 None:intergenic 55.0%
AGGGTGAGGAAAACCAACGG+TGG - Chr2:59274060-59274079 None:intergenic 55.0%
CCAAGTCGCCTTTCTCTCAC+AGG - Chr2:59275135-59275154 None:intergenic 55.0%
CCAGTTCCACCTCCTCAGTA+CGG + Chr2:59273984-59274003 MsG0280009845.01.T01:CDS 55.0%
CCTCAGTACGGCACTTTCCA+AGG + Chr2:59273996-59274015 MsG0280009845.01.T01:CDS 55.0%
CCTGTGAGAGAAAGGCGACT+TGG + Chr2:59275132-59275151 MsG0280009845.01.T01:CDS 55.0%
CGTACTGAGGAGGTGGAACT+GGG - Chr2:59273986-59274005 None:intergenic 55.0%
GCTGCTATCCCGTGGTATGT+TGG + Chr2:59277511-59277530 MsG0280009845.01.T01:CDS 55.0%
GCTGTAGCATATGTCGCTGG+TGG + Chr2:59275420-59275439 MsG0280009845.01.T01:intron 55.0%
GGAAAACCAACGGTGGGGTA+AGG - Chr2:59274053-59274072 None:intergenic 55.0%
GGGAAGGGTTGAGATTGCGA+CGG - Chr2:59273966-59273985 None:intergenic 55.0%
GGGTGAGGAAAACCAACGGT+GGG - Chr2:59274059-59274078 None:intergenic 55.0%
GGTGAGGAAAACCAACGGTG+GGG - Chr2:59274058-59274077 None:intergenic 55.0%
GTGGGAAATTGGAGACGCCT+TGG - Chr2:59274016-59274035 None:intergenic 55.0%
TAAGGGCCAGGATTAGGAGG+TGG - Chr2:59274035-59274054 None:intergenic 55.0%
TCTTTCTCGCTGCTATCCCG+TGG + Chr2:59277503-59277522 MsG0280009845.01.T01:CDS 55.0%
TGAGGAGGTGGAACTGGGAA+GGG - Chr2:59273981-59274000 None:intergenic 55.0%
TGGGAGTTGGGGGTTAACGT+GGG - Chr2:59273877-59273896 None:intergenic 55.0%
! GCCAACTAACTTGCACCAGG+TGG + Chr2:59277225-59277244 MsG0280009845.01.T01:intron 55.0%
!! AAAGTGCCGTACTGAGGAGG+TGG - Chr2:59273993-59274012 None:intergenic 55.0%
!! CCTTGGAAAGTGCCGTACTG+AGG - Chr2:59273999-59274018 None:intergenic 55.0%
!! TGGAAAGTGCCGTACTGAGG+AGG - Chr2:59273996-59274015 None:intergenic 55.0%
ATTGCGACGGTGGCTGAGGA+GGG - Chr2:59273953-59273972 None:intergenic 60.0%
CCGTACTGAGGAGGTGGAAC+TGG - Chr2:59273987-59274006 None:intergenic 60.0%
CTGAGGAGGTGGAACTGGGA+AGG - Chr2:59273982-59274001 None:intergenic 60.0%
GGGTAAGGGCCAGGATTAGG+AGG - Chr2:59274038-59274057 None:intergenic 60.0%
GTGGGAGTTGGGGGTTAACG+TGG - Chr2:59273878-59273897 None:intergenic 60.0%
GTGGGGTAAGGGCCAGGATT+AGG - Chr2:59274041-59274060 None:intergenic 60.0%
TGAGATTGCGACGGTGGCTG+AGG - Chr2:59273957-59273976 None:intergenic 60.0%
! ATAGGGAGGAGGAGGTGCAG+AGG - Chr2:59274105-59274124 None:intergenic 60.0%
! TAGGGAGGAGGAGGTGCAGA+GGG - Chr2:59274104-59274123 None:intergenic 60.0%
AGAGGGGTCAGAGCCAGGTG+GGG - Chr2:59274087-59274106 None:intergenic 65.0%
AGGGTGGCCGGAGGAGGATT+TGG - Chr2:59273934-59273953 None:intergenic 65.0%
CAGAGGGGTCAGAGCCAGGT+GGG - Chr2:59274088-59274107 None:intergenic 65.0%
GATTGCGACGGTGGCTGAGG+AGG - Chr2:59273954-59273973 None:intergenic 65.0%
GGGTGGCCGGAGGAGGATTT+GGG - Chr2:59273933-59273952 None:intergenic 65.0%
! AGGGAGGAGGAGGTGCAGAG+GGG - Chr2:59274103-59274122 None:intergenic 65.0%
AGGGGTCAGAGCCAGGTGGG+GGG - Chr2:59274085-59274104 None:intergenic 70.0%
CAGAGCCAGGTGGGGGGACA+GGG - Chr2:59274079-59274098 None:intergenic 70.0%
CCAACGGTGGGGTAAGGGCC+AGG - Chr2:59274047-59274066 None:intergenic 70.0%
CCTGGCCCTTACCCCACCGT+TGG + Chr2:59274044-59274063 MsG0280009845.01.T01:CDS 70.0%
GAGGGGTCAGAGCCAGGTGG+GGG - Chr2:59274086-59274105 None:intergenic 70.0%
GCAGAGGGGTCAGAGCCAGG+TGG - Chr2:59274089-59274108 None:intergenic 70.0%
GGTGCAGAGGGGTCAGAGCC+AGG - Chr2:59274092-59274111 None:intergenic 70.0%
TCAGAGCCAGGTGGGGGGAC+AGG - Chr2:59274080-59274099 None:intergenic 70.0%
CCAGGTGGGGGGACAGGGTG+AGG - Chr2:59274074-59274093 None:intergenic 75.0%
CCTCACCCTGTCCCCCCACC+TGG + Chr2:59274071-59274090 MsG0280009845.01.T01:CDS 75.0%
CGGTGGCTGAGGAGGGTGGC+CGG - Chr2:59273946-59273965 None:intergenic 75.0%
CTGAGGAGGGTGGCCGGAGG+AGG - Chr2:59273940-59273959 None:intergenic 75.0%
GCGACGGTGGCTGAGGAGGG+TGG - Chr2:59273950-59273969 None:intergenic 75.0%
TGGCTGAGGAGGGTGGCCGG+AGG - Chr2:59273943-59273962 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr2 gene 59273860 59278505 59273860 ID=MsG0280009845.01;Name=MsG0280009845.01
Chr2 mRNA 59273860 59278505 59273860 ID=MsG0280009845.01.T01;Parent=MsG0280009845.01;Name=MsG0280009845.01.T01;_AED=0.46;_eAED=0.46;_QI=52|1|1|1|1|1|4|258|163
Chr2 exon 59273860 59274152 59273860 ID=MsG0280009845.01.T01:exon:38482;Parent=MsG0280009845.01.T01
Chr2 exon 59275109 59275184 59275109 ID=MsG0280009845.01.T01:exon:38483;Parent=MsG0280009845.01.T01
Chr2 exon 59277489 59277603 59277489 ID=MsG0280009845.01.T01:exon:38484;Parent=MsG0280009845.01.T01
Chr2 exon 59278188 59278505 59278188 ID=MsG0280009845.01.T01:exon:38485;Parent=MsG0280009845.01.T01
Chr2 five_prime_UTR 59273860 59273911 59273860 ID=MsG0280009845.01.T01:five_prime_utr;Parent=MsG0280009845.01.T01
Chr2 CDS 59273912 59274152 59273912 ID=MsG0280009845.01.T01:cds;Parent=MsG0280009845.01.T01
Chr2 CDS 59275109 59275184 59275109 ID=MsG0280009845.01.T01:cds;Parent=MsG0280009845.01.T01
Chr2 CDS 59277489 59277603 59277489 ID=MsG0280009845.01.T01:cds;Parent=MsG0280009845.01.T01
Chr2 CDS 59278188 59278247 59278188 ID=MsG0280009845.01.T01:cds;Parent=MsG0280009845.01.T01
Chr2 three_prime_UTR 59278248 59278505 59278248 ID=MsG0280009845.01.T01:three_prime_utr;Parent=MsG0280009845.01.T01
Gene Sequence

>MsG0280009845.01.T01

ATGACCGAACACGACAAACCCAAATCCTCCTCCGGCCACCCTCCTCAGCCACCGTCGCAATCTCAACCCTTCCCAGTTCCACCTCCTCAGTACGGCACTTTCCAAGGCGTCTCCAATTTCCCACCTCCTAATCCTGGCCCTTACCCCACCGTTGGTTTTCCTCACCCTGTCCCCCCACCTGGCTCTGACCCCTCTGCACCTCCTCCTCCCTATTATCCTCATGGCTACCAAGCTTTTCCCGGTTATGCAGTTGCTGAAGGAAGACCTGTGAGAGAAAGGCGACTTGGATGTTGTGGTATTGGTTGTGGTTGGTGCTTGTTTATAATGGGTTTCTTTCTCGCTGCTATCCCGTGGTATGTTGGGGCAATAATTATGCTTTGTTCTAGAGTAGACTATCGAGAGAAACCTGGATACATTGCCTGTATAGTCGCTGCAATTGTGGCTACAATTGCGATTGTTCTTGGAGCGACAAATGTTGCAGATGACTGGTAA
Protein sequence

>MsG0280009845.01.T01

MTEHDKPKSSSGHPPQPPSQSQPFPVPPPQYGTFQGVSNFPPPNPGPYPTVGFPHPVPPPGSDPSAPPPPYYPHGYQAFPGYAVAEGRPVRERRLGCCGIGCGWCLFIMGFFLAAIPWYVGAIIMLCSRVDYREKPGYIACIVAAIVATIAIVLGATNVADDW*