AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380017094.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017094.01.T01 MTR_3g100750 93.773 273 2 1 1 273 1 258 0.0 521
MsG0380017094.01.T01 MTR_8g069110 71.667 180 51 0 93 272 90 269 2.13e-98 290
MsG0380017094.01.T01 MTR_7g083570 47.475 198 94 3 74 270 86 274 5.30e-64 202
MsG0380017094.01.T01 MTR_2g076350 47.030 202 102 3 75 271 25 226 3.99e-61 193
MsG0380017094.01.T01 MTR_1g033750 39.623 159 95 1 113 270 62 220 1.55e-43 147
MsG0380017094.01.T01 MTR_6g077990 38.994 159 96 1 113 270 37 195 2.50e-42 144
MsG0380017094.01.T01 MTR_6g077990 38.994 159 96 1 113 270 38 196 2.60e-42 144
MsG0380017094.01.T01 MTR_6g077990 40.411 146 86 1 126 270 8 153 2.18e-40 137
MsG0380017094.01.T01 MTR_8g100065 37.654 162 97 2 112 270 22 182 3.17e-40 138
MsG0380017094.01.T01 MTR_1g114640 36.413 184 107 3 89 270 43 218 4.48e-40 139
MsG0380017094.01.T01 MTR_8g100065 37.654 162 97 2 112 270 44 204 7.36e-40 138
MsG0380017094.01.T01 MTR_1g114690 35.849 159 101 1 113 270 57 215 6.14e-37 130
MsG0380017094.01.T01 MTR_1g114750 35.625 160 102 1 112 270 59 218 1.25e-36 130
MsG0380017094.01.T01 MTR_1g114690 35.220 159 102 1 113 270 57 215 1.59e-36 129
MsG0380017094.01.T01 MTR_1g115130 36.000 150 94 2 126 273 46 195 1.71e-31 116
MsG0380017094.01.T01 MTR_1g114690 29.534 193 101 2 113 270 57 249 6.50e-30 113
MsG0380017094.01.T01 MTR_1g114680 43.396 106 59 1 166 270 55 160 2.62e-25 99.4
MsG0380017094.01.T01 MTR_6g077990 39.815 108 64 1 113 219 37 144 1.57e-24 96.7
MsG0380017094.01.T01 MTR_8g100065 37.736 106 63 1 112 214 22 127 1.74e-22 90.5
MsG0380017094.01.T01 MTR_8g100065 37.736 106 63 1 112 214 44 149 2.31e-22 90.9
MsG0380017094.01.T01 MTR_1g114640 34.074 135 79 3 89 221 43 169 1.81e-21 89.0
MsG0380017094.01.T01 MTR_1g114690 33.929 112 73 1 113 223 57 168 3.18e-18 81.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017094.01.T01 AT1G28200 71.605 243 61 2 31 273 23 257 1.03e-122 350
MsG0380017094.01.T01 AT1G28200 71.605 243 61 2 31 273 23 257 1.03e-122 350
MsG0380017094.01.T01 AT2G22475 72.727 198 53 1 76 272 96 293 7.52e-110 320
MsG0380017094.01.T01 AT2G22475 72.603 146 39 1 76 220 96 241 1.33e-76 233
MsG0380017094.01.T01 AT4G40100 57.789 199 47 4 76 272 55 218 4.99e-73 223
MsG0380017094.01.T01 AT5G13200 40.892 269 138 6 3 266 4 256 2.21e-61 195
MsG0380017094.01.T01 AT4G01600 42.211 199 108 3 76 270 29 224 1.27e-54 176
MsG0380017094.01.T01 AT4G01600 42.135 178 101 1 95 270 8 185 8.93e-52 168
MsG0380017094.01.T01 AT4G01600 41.206 199 105 4 76 270 29 219 1.31e-50 166
MsG0380017094.01.T01 AT5G23350 34.259 216 133 4 60 270 2 213 4.91e-40 139
MsG0380017094.01.T01 AT5G13200 38.636 220 114 6 3 217 4 207 1.21e-39 137
MsG0380017094.01.T01 AT5G23360 36.875 160 98 2 113 270 47 205 1.29e-38 134
MsG0380017094.01.T01 AT5G23370 33.333 219 131 6 60 270 2 213 3.69e-38 134
MsG0380017094.01.T01 AT5G08350 33.831 201 116 4 72 270 27 212 4.17e-38 134

Find 98 sgRNAs with CRISPR-Local

Find 331 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTCGTTGTTACTTGTTTC+TGG 0.126004 3:-91889548 MsG0380017094.01.T01:three_prime_UTR
CCGTTGACAATCATGAATTT+TGG 0.145817 3:-91889791 MsG0380017094.01.T01:CDS
AAATAATAATTTGACGGTTT+TGG 0.155065 3:-91894615 MsG0380017094.01.T01:five_prime_UTR
TGAAAGATGTTCTTGGAAAA+TGG 0.239709 3:-91894052 MsG0380017094.01.T01:CDS
AGCAAGATCTTCAGCCTTCT+TGG 0.287689 3:+91894007 None:intergenic
GAATCAGAGTCTTGGGGTTT+GGG 0.291767 3:+91894354 None:intergenic
ACGTCGTTTGGGTCGAGTTT+AGG 0.310396 3:+91894300 None:intergenic
TTTAGGATACGGAGCGTAAT+CGG 0.313258 3:+91894317 None:intergenic
GGTGGTGGTGCGACGTCGTT+TGG 0.326020 3:+91894288 None:intergenic
ATATTATTACATTCTAAATC+TGG 0.330201 3:-91889498 MsG0380017094.01.T01:three_prime_UTR
TCAATTCAAACCCAAGTTGA+TGG 0.340780 3:+91894505 None:intergenic
AGAATCAGAGTCTTGGGGTT+TGG 0.350975 3:+91894353 None:intergenic
ATTTAAACATGATAGTTATA+TGG 0.356108 3:-91889445 MsG0380017094.01.T01:three_prime_UTR
GATTCGGTGAAAGATGTTCT+TGG 0.357881 3:-91894059 MsG0380017094.01.T01:CDS
TGCTACCTCTCCACCTCTGC+TGG 0.362383 3:-91892943 MsG0380017094.01.T01:CDS
GACTCAATGGAGCTATTATA+AGG 0.381490 3:-91892836 MsG0380017094.01.T01:intron
GCAGAAGTGGGTTCGGGAAC+TGG 0.387440 3:+91894183 None:intergenic
TTAGGATACGGAGCGTAATC+GGG 0.390438 3:+91894318 None:intergenic
TACTTCCTTAGTCTAGTTTG+TGG 0.390817 3:-91889598 MsG0380017094.01.T01:three_prime_UTR
GGGTTGGCTTTGCTTGTGGA+TGG 0.392668 3:+91889840 None:intergenic
CACCTCTGCTGGACCTGTCA+TGG 0.396719 3:-91892932 MsG0380017094.01.T01:CDS
GAAAGATGTTCTTGGAAAAT+GGG 0.402168 3:-91894051 MsG0380017094.01.T01:CDS
AGAGTCTTGGGGTTTGGGAT+TGG 0.404551 3:+91894359 None:intergenic
TGCTCAGGGAACAAAAGTTC+TGG 0.404565 3:-91893043 MsG0380017094.01.T01:CDS
ATCAACACAGACCTCATGTT+TGG 0.406142 3:+91889669 None:intergenic
CTCTTAGCAGAAGTGGGTTC+GGG 0.406503 3:+91894177 None:intergenic
AGAGTGAGAATCAGAGTCTT+GGG 0.416127 3:+91894347 None:intergenic
ACTCTTAGCAGAAGTGGGTT+CGG 0.417854 3:+91894176 None:intergenic
TACTACTCATATTGTTGACT+TGG 0.419934 3:+91894442 None:intergenic
TTGTGTTTGTGTTGGTGGGT+TGG 0.423984 3:+91894385 None:intergenic
TCGATTGATTTGTTGTAAGT+TGG 0.435282 3:-91889472 MsG0380017094.01.T01:three_prime_UTR
ATTGAGTCTGGTCACCAGTC+TGG 0.437061 3:+91892851 None:intergenic
GCAATCTCGCTGATACACTA+TGG 0.438686 3:-91889715 MsG0380017094.01.T01:exon
AAGAAGGCTGAAGATCTTGC+TGG 0.439141 3:-91894005 MsG0380017094.01.T01:CDS
GGTGTTTGTGTTTGTGTTGG+TGG 0.440766 3:+91894380 None:intergenic
GGTTGGCTTTGCTTGTGGAT+GGG 0.441303 3:+91889841 None:intergenic
TTCCATAAAACAGTGAAAAC+AGG 0.443896 3:-91893099 MsG0380017094.01.T01:intron
GTGTTTGTGTTTGTGTTGGT+GGG 0.451705 3:+91894381 None:intergenic
TGCTGTGGGAAGAATTGCTC+AGG 0.454151 3:-91893058 MsG0380017094.01.T01:CDS
GGGCATGGTGGTGGCAGCAT+CGG 0.455840 3:+91894236 None:intergenic
AGTTCAAAATAATAATTTGA+CGG 0.461591 3:-91894621 MsG0380017094.01.T01:five_prime_UTR
TTCAGAGAAAACCATCAACT+TGG 0.467782 3:-91894516 MsG0380017094.01.T01:five_prime_UTR
TATAATAGCTCCATTGAGTC+TGG 0.472016 3:+91892839 None:intergenic
GTGGGTTCGGGAACTGGTGC+AGG 0.472656 3:+91894189 None:intergenic
ACTACTCATATTGTTGACTT+GGG 0.480812 3:+91894443 None:intergenic
GGGATTAGATTCGGCGGGCA+TGG 0.481538 3:+91894221 None:intergenic
ACCTCTGCTGGACCTGTCAT+GGG 0.481952 3:-91892931 MsG0380017094.01.T01:CDS
GTGTTGGTGGGTTGGACATG+AGG 0.489459 3:+91894393 None:intergenic
ATTGGTGTTTGTGTTTGTGT+TGG 0.490015 3:+91894377 None:intergenic
AGATTCGGCGGGCATGGTGG+TGG 0.492264 3:+91894227 None:intergenic
CATGGTGGTGGCAGCATCGG+TGG 0.493757 3:+91894239 None:intergenic
GCGCGAGATTCAGTAGCAAC+AGG 0.494862 3:+91894261 None:intergenic
AGTAGGGTTGGCTTTGCTTG+TGG 0.497012 3:+91889836 None:intergenic
GTGGTGGTGCGACGTCGTTT+GGG 0.498600 3:+91894289 None:intergenic
CAGCTCCACAAACTAGACTA+AGG 0.505325 3:+91889593 None:intergenic
ATTGTTGACTTGGGGAGGAT+CGG 0.507858 3:+91894452 None:intergenic
GAGAGTGAGAATCAGAGTCT+TGG 0.511071 3:+91894346 None:intergenic
AACTGGTGCAGGAGAGACAT+AGG 0.514578 3:+91894200 None:intergenic
TCAGTAGCAACAGGTGGTGG+TGG 0.526626 3:+91894270 None:intergenic
GAAATAACTCTTAGCAGAAG+TGG 0.530714 3:+91894170 None:intergenic
GTAGCAACAGGTGGTGGTGG+TGG 0.530974 3:+91894273 None:intergenic
GATTCAGTAGCAACAGGTGG+TGG 0.532264 3:+91894267 None:intergenic
AGACTGGTGACCAGACTCAA+TGG 0.534492 3:-91892849 MsG0380017094.01.T01:CDS
AGAGACATAGGGATTAGATT+CGG 0.541864 3:+91894212 None:intergenic
TTTGGGTCGAGTTTAGGATA+CGG 0.542371 3:+91894306 None:intergenic
CATGACAGGTCCAGCAGAGG+TGG 0.545232 3:+91892933 None:intergenic
CTCATATTGTTGACTTGGGG+AGG 0.551649 3:+91894447 None:intergenic
ACTGCTCGCAGCTGATGCAA+TGG 0.553859 3:+91889867 None:intergenic
TCACCAGTCTGGTAAGAAAG+TGG 0.556592 3:+91892862 None:intergenic
TGGACATGAGGTTGAACTTG+AGG 0.563584 3:+91894405 None:intergenic
AACCCACTTTCTTACCAGAC+TGG 0.563921 3:-91892865 MsG0380017094.01.T01:CDS
GTCAACAATATGAGTAGTAG+TGG 0.564010 3:-91894438 MsG0380017094.01.T01:exon
TCAGAGAAAACCATCAACTT+GGG 0.565702 3:-91894515 MsG0380017094.01.T01:five_prime_UTR
CCAAAATTCATGATTGTCAA+CGG 0.566250 3:+91889791 None:intergenic
ACATAGGGATTAGATTCGGC+GGG 0.570583 3:+91894216 None:intergenic
TAGGATACGGAGCGTAATCG+GGG 0.571711 3:+91894319 None:intergenic
ACAGCAGCATCAGCAAAACT+AGG 0.577655 3:+91893075 None:intergenic
AAATACAAGACTCCCATGAC+AGG 0.580237 3:+91892919 None:intergenic
GACATAGGGATTAGATTCGG+CGG 0.580305 3:+91894215 None:intergenic
CAGGTCCAGCAGAGGTGGAG+AGG 0.582547 3:+91892938 None:intergenic
ATTAGATTCGGCGGGCATGG+TGG 0.585883 3:+91894224 None:intergenic
TTCTCTGAAACGTGAATACG+TGG 0.591351 3:+91894530 None:intergenic
AGCTGCTGAAGCTACCAAGA+AGG 0.592291 3:-91894021 MsG0380017094.01.T01:CDS
AAAGATGTTCTTGGAAAATG+GGG 0.592681 3:-91894050 MsG0380017094.01.T01:CDS
AAATAACTCTTAGCAGAAGT+GGG 0.592905 3:+91894171 None:intergenic
CACCAGTCTGGTAAGAAAGT+GGG 0.607437 3:+91892863 None:intergenic
CTACTCATATTGTTGACTTG+GGG 0.609204 3:+91894444 None:intergenic
GGAACAAAAGTTCTGGCAGA+AGG 0.613260 3:-91893036 MsG0380017094.01.T01:CDS
ACTGGTGCAGGAGAGACATA+GGG 0.634538 3:+91894201 None:intergenic
TCCCATGACAGGTCCAGCAG+AGG 0.644056 3:+91892930 None:intergenic
GAGTGAGAATCAGAGTCTTG+GGG 0.647869 3:+91894348 None:intergenic
ACAAAAGTTCTGGCAGAAGG+TGG 0.648034 3:-91893033 MsG0380017094.01.T01:CDS
AAGATCTTGCTGGAAACATG+TGG 0.657196 3:-91893995 MsG0380017094.01.T01:CDS
AGGATACGGAGCGTAATCGG+GGG 0.674476 3:+91894320 None:intergenic
CGAGATTCAGTAGCAACAGG+TGG 0.675679 3:+91894264 None:intergenic
ACATGAGGTTGAACTTGAGG+AGG 0.679456 3:+91894408 None:intergenic
CATGTAGTATACCAAACATG+AGG 0.682970 3:-91889680 MsG0380017094.01.T01:three_prime_UTR
GCTGTGGGAAGAATTGCTCA+GGG 0.687709 3:-91893057 MsG0380017094.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAATAATATATTAAATTTT+AGG - Chr3:91892824-91892843 MsG0380017094.01.T01:intron 0.0%
!!! AAATAATATATTAAATTTTA+GGG - Chr3:91892825-91892844 MsG0380017094.01.T01:intron 0.0%
!!! TACATATTTATTTTTTTTGA+AGG - Chr3:91891832-91891851 MsG0380017094.01.T01:intron 10.0%
!!! TATTTAATTAATTTTATAGC+TGG - Chr3:91890815-91890834 MsG0380017094.01.T01:intron 10.0%
!! AACAAAAGGTTATAAAATTT+AGG + Chr3:91892385-91892404 None:intergenic 15.0%
!! ACAAAAGGTTATAAAATTTA+GGG + Chr3:91892384-91892403 None:intergenic 15.0%
!! AGTTCAAAATAATAATTTGA+CGG - Chr3:91889384-91889403 MsG0380017094.01.T01:three_prime_UTR 15.0%
!! ATATTATTACATTCTAAATC+TGG - Chr3:91894507-91894526 MsG0380017094.01.T01:five_prime_UTR 15.0%
!! ATTCATTATTTGAACAAAAT+GGG - Chr3:91892041-91892060 MsG0380017094.01.T01:intron 15.0%
!! ATTTAAACATGATAGTTATA+TGG - Chr3:91894560-91894579 MsG0380017094.01.T01:five_prime_UTR 15.0%
!! CTTAAATGAATTTGAATAAT+TGG + Chr3:91890074-91890093 None:intergenic 15.0%
!! GTAATCTATTAAAAATCATA+CGG + Chr3:91893939-91893958 None:intergenic 15.0%
!! TAATCTATTAAAAATCATAC+GGG + Chr3:91893938-91893957 None:intergenic 15.0%
!!! TATTCATAAAATTTTGCTAT+AGG + Chr3:91891354-91891373 None:intergenic 15.0%
!!! TTTAATTAACATGAGATTTT+TGG - Chr3:91891528-91891547 MsG0380017094.01.T01:intron 15.0%
!! AATTAGAATAGATTGAATGA+AGG - Chr3:91890572-91890591 MsG0380017094.01.T01:intron 20.0%
!! AGATATATTGTATTGAGAAA+TGG - Chr3:91893480-91893499 MsG0380017094.01.T01:intron 20.0%
!! ATTAGAATAGATTGAATGAA+GGG - Chr3:91890573-91890592 MsG0380017094.01.T01:intron 20.0%
!! CAAGCAATTTATATTAAGAT+TGG - Chr3:91892730-91892749 MsG0380017094.01.T01:intron 20.0%
!! GATTCATTATTTGAACAAAA+TGG - Chr3:91892040-91892059 MsG0380017094.01.T01:intron 20.0%
!! GCTATTCAATAAATATTTCT+TGG - Chr3:91890093-91890112 MsG0380017094.01.T01:intron 20.0%
!! TAATCATCCAAAATAATTTC+AGG + Chr3:91891573-91891592 None:intergenic 20.0%
!! TAATTCCTCGAAAAAAATAT+TGG + Chr3:91891814-91891833 None:intergenic 20.0%
!! TAATTGGAAGTAAAAGAATT+AGG + Chr3:91890058-91890077 None:intergenic 20.0%
!! TCTTAAGTAATATCATTGTT+TGG - Chr3:91891603-91891622 MsG0380017094.01.T01:intron 20.0%
!! TTGTTCTTTAATAACTGATT+TGG - Chr3:91891226-91891245 MsG0380017094.01.T01:intron 20.0%
!!! AAATAATAATTTGACGGTTT+TGG - Chr3:91889390-91889409 MsG0380017094.01.T01:three_prime_UTR 20.0%
!!! AAATACTAACTGAATTTTGT+TGG + Chr3:91894595-91894614 None:intergenic 20.0%
!!! AATAATAATTTGACGGTTTT+GGG - Chr3:91889391-91889410 MsG0380017094.01.T01:three_prime_UTR 20.0%
!!! AATATATTAAATTTTAGGGG+TGG - Chr3:91892829-91892848 MsG0380017094.01.T01:intron 20.0%
!!! AATCATGAATTTTGGTTTAT+GGG - Chr3:91894222-91894241 MsG0380017094.01.T01:CDS 20.0%
!!! AGTCATATTTTTCTATTGTT+TGG - Chr3:91894069-91894088 MsG0380017094.01.T01:CDS 20.0%
!!! ATAGATTTTAGATGTATCTA+GGG - Chr3:91891775-91891794 MsG0380017094.01.T01:intron 20.0%
!!! ATCTGTATAAATTTTTCAGT+AGG + Chr3:91894189-91894208 None:intergenic 20.0%
!!! ATTAATTTTATAGCTGGAAA+TGG - Chr3:91890821-91890840 MsG0380017094.01.T01:intron 20.0%
!!! CATTTTGATATTTGAATTCA+AGG - Chr3:91889446-91889465 MsG0380017094.01.T01:three_prime_UTR 20.0%
!!! TAATCTCTACACTTTTTTAA+TGG + Chr3:91890652-91890671 None:intergenic 20.0%
!!! TACTTTTAATCACAACAAAA+AGG + Chr3:91892663-91892682 None:intergenic 20.0%
!!! TCTGTATAAATTTTTCAGTA+GGG + Chr3:91894188-91894207 None:intergenic 20.0%
! ATATTACTTAAGATCCCTAA+GGG + Chr3:91891596-91891615 None:intergenic 25.0%
! ATTAAAAAATCCTCAAATGC+TGG + Chr3:91891514-91891533 None:intergenic 25.0%
! CAATTAAAAAATACAGAGGT+TGG + Chr3:91892169-91892188 None:intergenic 25.0%
! CTAATTACGACAAAATTTAG+AGG + Chr3:91890558-91890577 None:intergenic 25.0%
! TCAGTTATTAAAGAACAAAG+CGG + Chr3:91891224-91891243 None:intergenic 25.0%
! TTGAGAATAAATGTCATCTT+TGG - Chr3:91893967-91893986 MsG0380017094.01.T01:intron 25.0%
!! ACATAATTCTTTTGATGTTG+AGG - Chr3:91893805-91893824 MsG0380017094.01.T01:intron 25.0%
!! ATTTTGTCTAGAAAAGATGA+TGG - Chr3:91892092-91892111 MsG0380017094.01.T01:intron 25.0%
!! ATTTTTACTTTGTATGTGCA+TGG - Chr3:91890186-91890205 MsG0380017094.01.T01:intron 25.0%
!! CATAATTCTTTTGATGTTGA+GGG - Chr3:91893806-91893825 MsG0380017094.01.T01:intron 25.0%
!! CATAGATTTTAGATGTATCT+AGG - Chr3:91891774-91891793 MsG0380017094.01.T01:intron 25.0%
!! CATCTAAAATCTATGAGTAT+TGG + Chr3:91891769-91891788 None:intergenic 25.0%
!! GGTTTCTCTTATAATTTTCT+AGG + Chr3:91890631-91890650 None:intergenic 25.0%
!! TAAAGTATCTGCAAAATCAA+AGG + Chr3:91889926-91889945 None:intergenic 25.0%
!! TGATTATTTCTCAATACTAG+AGG - Chr3:91891288-91891307 MsG0380017094.01.T01:intron 25.0%
!! TTTTGCAGATACTTTAGATT+CGG - Chr3:91889930-91889949 MsG0380017094.01.T01:intron 25.0%
!!! CAACCTCTGTATTTTTTAAT+TGG - Chr3:91892167-91892186 MsG0380017094.01.T01:intron 25.0%
!!! CAATCATGAATTTTGGTTTA+TGG - Chr3:91894221-91894240 MsG0380017094.01.T01:CDS 25.0%
!!! CACTTATTTTATTCTAGTGT+TGG + Chr3:91890391-91890410 None:intergenic 25.0%
!!! TATAAATTTTTCAGTAGGGT+TGG + Chr3:91894184-91894203 None:intergenic 25.0%
!!! TTTCATGTTTTTGTGAAATG+AGG + Chr3:91894369-91894388 None:intergenic 25.0%
!!! TTTTTTTGAAGGATTTTTCG+AGG - Chr3:91891843-91891862 MsG0380017094.01.T01:intron 25.0%
AAACACTACTCCAATACAAT+TGG - Chr3:91891887-91891906 MsG0380017094.01.T01:intron 30.0%
AAACCAACAATATCATCAAC+TGG + Chr3:91892139-91892158 None:intergenic 30.0%
AAAGATGTTCTTGGAAAATG+GGG - Chr3:91889955-91889974 MsG0380017094.01.T01:intron 30.0%
AAATAACTCTTAGCAGAAGT+GGG + Chr3:91889837-91889856 None:intergenic 30.0%
AACACTACTCCAATACAATT+GGG - Chr3:91891888-91891907 MsG0380017094.01.T01:intron 30.0%
AACCAACAATATCATCAACT+GGG + Chr3:91892138-91892157 None:intergenic 30.0%
AAGTGTAGAGATTAATGAGT+TGG - Chr3:91890658-91890677 MsG0380017094.01.T01:intron 30.0%
AATGACTCCAACTAAATTTC+CGG + Chr3:91891409-91891428 None:intergenic 30.0%
ACTGACATGATTGATATTTG+AGG + Chr3:91891473-91891492 None:intergenic 30.0%
ACTTTGAACCAAACCAATAT+CGG + Chr3:91892477-91892496 None:intergenic 30.0%
ACTTTGAACCAAACCAATAT+TGG + Chr3:91892477-91892496 None:intergenic 30.0%
AGAAAACACAGAAAGTAAAC+TGG - Chr3:91890848-91890867 MsG0380017094.01.T01:intron 30.0%
AGGATACAATGAGTAAGAAT+GGG + Chr3:91893885-91893904 None:intergenic 30.0%
CAGAAAATATGCTAGAAACT+AGG - Chr3:91890495-91890514 MsG0380017094.01.T01:intron 30.0%
CATATATGTTTCCCCAATAT+TGG - Chr3:91893739-91893758 MsG0380017094.01.T01:intron 30.0%
CATCAAAAGAATTATGTGTC+TGG + Chr3:91892524-91892543 None:intergenic 30.0%
CCAAAATTCATGATTGTCAA+CGG + Chr3:91894217-91894236 None:intergenic 30.0%
CTTTGAACCAAACCAATATT+GGG + Chr3:91893754-91893773 None:intergenic 30.0%
GAAAGATGTTCTTGGAAAAT+GGG - Chr3:91889954-91889973 MsG0380017094.01.T01:intron 30.0%
GATATTACTTAAGATCCCTA+AGG + Chr3:91891597-91891616 None:intergenic 30.0%
GATTAGTGACTACACTTATA+TGG - Chr3:91893995-91894014 MsG0380017094.01.T01:CDS 30.0%
GTAATGCAGTATACATATCA+TGG + Chr3:91891254-91891273 None:intergenic 30.0%
GTCAAAATAGCTCAAATGAA+TGG + Chr3:91890885-91890904 None:intergenic 30.0%
TAACATGCAATACCGTAAAA+GGG + Chr3:91891675-91891694 None:intergenic 30.0%
TATCTGCAAAATCAAAGGAT+AGG + Chr3:91889921-91889940 None:intergenic 30.0%
TATTGAGAAATGGTAAAACG+TGG - Chr3:91893490-91893509 MsG0380017094.01.T01:intron 30.0%
TATTGGACATGTACTAGTAT+CGG + Chr3:91891752-91891771 None:intergenic 30.0%
TGAAAGATGTTCTTGGAAAA+TGG - Chr3:91889953-91889972 MsG0380017094.01.T01:intron 30.0%
TTAAGGAAACCAAAAGTAGT+AGG + Chr3:91892317-91892336 None:intergenic 30.0%
TTCCATAAAACAGTGAAAAC+AGG - Chr3:91890906-91890925 MsG0380017094.01.T01:intron 30.0%
TTTGAACCAAACCAATATTG+GGG + Chr3:91893753-91893772 None:intergenic 30.0%
! AAACGTAAACCTACTACTTT+TGG - Chr3:91893551-91893570 MsG0380017094.01.T01:intron 30.0%
! AAATCAAGGATTCCCTTTTA+CGG - Chr3:91891660-91891679 MsG0380017094.01.T01:intron 30.0%
! AACCTTTTGTTGATGTAACT+AGG - Chr3:91892394-91892413 MsG0380017094.01.T01:intron 30.0%
! ACATAATTCTTTTGATGTCG+AGG - Chr3:91892527-91892546 MsG0380017094.01.T01:intron 30.0%
! AGAGATTAATGAGTTGGATA+AGG - Chr3:91890664-91890683 MsG0380017094.01.T01:intron 30.0%
! AGCTTTTCATCTTATGCATT+AGG - Chr3:91894107-91894126 MsG0380017094.01.T01:intron 30.0%
! ATTGATATTTGAGGTTCCAA+GGG + Chr3:91891464-91891483 None:intergenic 30.0%
! ATTTTAGATGTATCTAGGGA+AGG - Chr3:91891779-91891798 MsG0380017094.01.T01:intron 30.0%
! ATTTTGGATGATTACCCTTA+GGG - Chr3:91891579-91891598 MsG0380017094.01.T01:intron 30.0%
! CATAATTCTTTTGATGTCGA+GGG - Chr3:91892528-91892547 MsG0380017094.01.T01:intron 30.0%
! CTTTTCTAGACAAAATACAG+AGG + Chr3:91892088-91892107 None:intergenic 30.0%
! TAACGTAAACCTACTACTTT+TGG - Chr3:91892305-91892324 MsG0380017094.01.T01:intron 30.0%
! TACTACTCATATTGTTGACT+TGG + Chr3:91889566-91889585 None:intergenic 30.0%
! TCCAAATTTGAAGTATGAGT+GGG - Chr3:91891712-91891731 MsG0380017094.01.T01:intron 30.0%
! TTGGAGTAGTGTTTAAAATG+TGG + Chr3:91891881-91891900 None:intergenic 30.0%
! TTTTAGATGTATCTAGGGAA+GGG - Chr3:91891780-91891799 MsG0380017094.01.T01:intron 30.0%
! TTTTCATCTTATGCATTAGG+TGG - Chr3:91894110-91894129 MsG0380017094.01.T01:intron 30.0%
!! ACTACTCATATTGTTGACTT+GGG + Chr3:91889565-91889584 None:intergenic 30.0%
!! TATTTTGGATGATTACCCTT+AGG - Chr3:91891578-91891597 MsG0380017094.01.T01:intron 30.0%
!! TCGATTGATTTGTTGTAAGT+TGG - Chr3:91894533-91894552 MsG0380017094.01.T01:five_prime_UTR 30.0%
!! TTTTGATGTTGAGGGTATAA+AGG - Chr3:91893814-91893833 MsG0380017094.01.T01:intron 30.0%
!!! ATGCTCCAATATTTTTTTCG+AGG - Chr3:91891806-91891825 MsG0380017094.01.T01:intron 30.0%
!!! CCTCTGTATTTTTTAATTGG+CGG - Chr3:91892170-91892189 MsG0380017094.01.T01:intron 30.0%
!!! GATTTTTGGAATTCGAAGAA+AGG - Chr3:91891542-91891561 MsG0380017094.01.T01:intron 30.0%
AAAGGCAACATAACTGAACA+TGG + Chr3:91891636-91891655 None:intergenic 35.0%
AAATAAGTGTAGCAGAGATG+AGG - Chr3:91890402-91890421 MsG0380017094.01.T01:intron 35.0%
AAGGAACTCCTAAAAACTCA+GGG + Chr3:91893681-91893700 None:intergenic 35.0%
AAGGAACTCTTCAAAACTCA+GGG + Chr3:91892437-91892456 None:intergenic 35.0%
AAGGCAACATAACTGAACAT+GGG + Chr3:91891635-91891654 None:intergenic 35.0%
ACCCACTCATACTTCAAATT+TGG + Chr3:91891716-91891735 None:intergenic 35.0%
ACTAATATCACCAGCATTTG+AGG - Chr3:91891501-91891520 MsG0380017094.01.T01:intron 35.0%
ACTCATTGTATCCTGAATTC+TGG - Chr3:91893891-91893910 MsG0380017094.01.T01:intron 35.0%
AGAGACATAGGGATTAGATT+CGG + Chr3:91889796-91889815 None:intergenic 35.0%
AGCAAAGGCTTCTCTTAAAT+AGG - Chr3:91892235-91892254 MsG0380017094.01.T01:intron 35.0%
AGCCTAGTTACATCAACAAA+AGG + Chr3:91892399-91892418 None:intergenic 35.0%
ATATGCTAGAAACTAGGCTT+AGG - Chr3:91890501-91890520 MsG0380017094.01.T01:intron 35.0%
ATGACTCCAACTAAATTTCC+GGG + Chr3:91891408-91891427 None:intergenic 35.0%
ATGATGCATCCCAATTGTAT+TGG + Chr3:91891900-91891919 None:intergenic 35.0%
CAGGATACAATGAGTAAGAA+TGG + Chr3:91893886-91893905 None:intergenic 35.0%
CATATATGTTTCCCCGATAT+TGG - Chr3:91892461-91892480 MsG0380017094.01.T01:intron 35.0%
CATGTAGTATACCAAACATG+AGG - Chr3:91894325-91894344 MsG0380017094.01.T01:CDS 35.0%
CCGCCAATTAAAAAATACAG+AGG + Chr3:91892173-91892192 None:intergenic 35.0%
CTCTTTAACTACCAGAATTC+AGG + Chr3:91893905-91893924 None:intergenic 35.0%
CTTTGAACCAAACCAATATC+GGG + Chr3:91892476-91892495 None:intergenic 35.0%
GAAATAACTCTTAGCAGAAG+TGG + Chr3:91889838-91889857 None:intergenic 35.0%
GACTCAATGGAGCTATTATA+AGG - Chr3:91891169-91891188 MsG0380017094.01.T01:intron 35.0%
GCAAGAATATGATAGGGATT+AGG - Chr3:91892622-91892641 MsG0380017094.01.T01:intron 35.0%
GGAATCCTTGATTTCAAGAA+AGG + Chr3:91891654-91891673 None:intergenic 35.0%
GGGGAAACATATATGAACTA+AGG + Chr3:91892456-91892475 None:intergenic 35.0%
GTAACATGCAATACCGTAAA+AGG + Chr3:91891676-91891695 None:intergenic 35.0%
GTCAACAATATGAGTAGTAG+TGG - Chr3:91889567-91889586 MsG0380017094.01.T01:three_prime_UTR 35.0%
TAAGGAACTCTTCAAAACTC+AGG + Chr3:91892438-91892457 None:intergenic 35.0%
TAGAATTAGAGAGAGAGTTG+AGG - Chr3:91890460-91890479 MsG0380017094.01.T01:intron 35.0%
TATAATAGCTCCATTGAGTC+TGG + Chr3:91891169-91891188 None:intergenic 35.0%
TCACAACACCATGAAGAAAA+AGG + Chr3:91891988-91892007 None:intergenic 35.0%
TCAGAGAAAACCATCAACTT+GGG - Chr3:91889490-91889509 MsG0380017094.01.T01:three_prime_UTR 35.0%
TCTAGACAAAATACAGAGGT+TGG + Chr3:91892084-91892103 None:intergenic 35.0%
TGTTGCCTTTCTTGAAATCA+AGG - Chr3:91891646-91891665 MsG0380017094.01.T01:intron 35.0%
TTCAGAGAAAACCATCAACT+TGG - Chr3:91889489-91889508 MsG0380017094.01.T01:three_prime_UTR 35.0%
TTGTGATCAAGAGAAGATAG+AGG - Chr3:91890241-91890260 MsG0380017094.01.T01:intron 35.0%
TTTGAACCAAACCAATATCG+GGG + Chr3:91892475-91892494 None:intergenic 35.0%
! AAGCTTTATCCAATCAAGTG+GGG + Chr3:91890738-91890757 None:intergenic 35.0%
! ACATGTACTAGTATCGGATA+CGG + Chr3:91891746-91891765 None:intergenic 35.0%
! ACTTCAAATTTGGAGTACCT+GGG + Chr3:91891706-91891725 None:intergenic 35.0%
! ATGTTTCCCCAATATTGGTT+TGG - Chr3:91893744-91893763 MsG0380017094.01.T01:intron 35.0%
! ATTGGTGTTTGTGTTTGTGT+TGG + Chr3:91889631-91889650 None:intergenic 35.0%
! CAAGCTTTATCCAATCAAGT+GGG + Chr3:91890739-91890758 None:intergenic 35.0%
! CATTCGTTGTTACTTGTTTC+TGG - Chr3:91894457-91894476 MsG0380017094.01.T01:five_prime_UTR 35.0%
! CCGTTGACAATCATGAATTT+TGG - Chr3:91894214-91894233 MsG0380017094.01.T01:CDS 35.0%
! CGTGATAAACTAAGAAGCAT+AGG - Chr3:91892201-91892220 MsG0380017094.01.T01:intron 35.0%
! CTCCAAATTTGAAGTATGAG+TGG - Chr3:91891711-91891730 MsG0380017094.01.T01:intron 35.0%
! GACCTGTTTTCACTGTTTTA+TGG + Chr3:91890911-91890930 None:intergenic 35.0%
! GAGTAGTGTTTAAAATGTGG+CGG + Chr3:91891878-91891897 None:intergenic 35.0%
! GATTGATATTTGAGGTTCCA+AGG + Chr3:91891465-91891484 None:intergenic 35.0%
! GGTGCTTCCTGAAATTATTT+TGG - Chr3:91891563-91891582 MsG0380017094.01.T01:intron 35.0%
! TACTTCAAATTTGGAGTACC+TGG + Chr3:91891707-91891726 None:intergenic 35.0%
! TACTTCCTTAGTCTAGTTTG+TGG - Chr3:91894407-91894426 MsG0380017094.01.T01:CDS 35.0%
! TCAATTCAAACCCAAGTTGA+TGG + Chr3:91889503-91889522 None:intergenic 35.0%
! TTGCTCAACCTTTTTCTTCA+TGG - Chr3:91891977-91891996 MsG0380017094.01.T01:intron 35.0%
!! CTACTCATATTGTTGACTTG+GGG + Chr3:91889564-91889583 None:intergenic 35.0%
!! TTGTATGTGAAGGAAGTGTT+GGG - Chr3:91890355-91890374 MsG0380017094.01.T01:intron 35.0%
!!! GAGCAAGTAGCTGTTTTTTT+TGG + Chr3:91891963-91891982 None:intergenic 35.0%
!!! GAGCTGTTTTAGTATTGTGA+TGG - Chr3:91894429-91894448 MsG0380017094.01.T01:CDS 35.0%
!!! GTTTTAAGAAGTTGTTCCTC+TGG + Chr3:91891035-91891054 None:intergenic 35.0%
AAAATCACACTCTCTTCCCT+TGG - Chr3:91891445-91891464 MsG0380017094.01.T01:intron 40.0%
AAAGGAGTGGAAGCTAACTA+AGG - Chr3:91893832-91893851 MsG0380017094.01.T01:intron 40.0%
AAATACAAGACTCCCATGAC+AGG + Chr3:91891089-91891108 None:intergenic 40.0%
AAATTTCCGGGACACAAGTT+GGG + Chr3:91891396-91891415 None:intergenic 40.0%
AACAAAGCGGTAACAAGCAA+AGG + Chr3:91891211-91891230 None:intergenic 40.0%
AAGATAGAGGCCAATTAGAG+AGG - Chr3:91890254-91890273 MsG0380017094.01.T01:intron 40.0%
AAGATCTTGCTGGAAACATG+TGG - Chr3:91890010-91890029 MsG0380017094.01.T01:intron 40.0%
AGAGGATGTGTTTGCATTTC+TGG - Chr3:91890272-91890291 MsG0380017094.01.T01:intron 40.0%
AGAGTGAGAATCAGAGTCTT+GGG + Chr3:91889661-91889680 None:intergenic 40.0%
AGGATCATGTGTTCAATGTG+TGG - Chr3:91890422-91890441 MsG0380017094.01.T01:intron 40.0%
ATCAACACAGACCTCATGTT+TGG + Chr3:91894339-91894358 None:intergenic 40.0%
ATTCTTGCAAGATGTGTGTG+AGG - Chr3:91892559-91892578 MsG0380017094.01.T01:intron 40.0%
CAAGGAACTCCTAAAAACTC+AGG + Chr3:91893682-91893701 None:intergenic 40.0%
CCACTTGATTGGATAAAGCT+TGG - Chr3:91890737-91890756 MsG0380017094.01.T01:intron 40.0%
GAATTTGAGAGAGAGATGCA+AGG + Chr3:91893700-91893719 None:intergenic 40.0%
GACTACACTTATATGGTGTG+TGG - Chr3:91894002-91894021 MsG0380017094.01.T01:CDS 40.0%
GCAAACACATCCTCTCTAAT+TGG + Chr3:91890267-91890286 None:intergenic 40.0%
GCTGGTGATATTAGTCGTTA+AGG + Chr3:91891496-91891515 None:intergenic 40.0%
TAAATTTCCGGGACACAAGT+TGG + Chr3:91891397-91891416 None:intergenic 40.0%
TACTTTGTATGTGCATGGCT+GGG - Chr3:91890191-91890210 MsG0380017094.01.T01:intron 40.0%
TAGGCAACTGAATAGAGCAA+AGG - Chr3:91892220-91892239 MsG0380017094.01.T01:intron 40.0%
TCTTGCAAGATGTGTGTGAA+GGG - Chr3:91893150-91893169 MsG0380017094.01.T01:intron 40.0%
TGGTAGAGAAAGACTGTACA+AGG + Chr3:91891943-91891962 None:intergenic 40.0%
TTACTTTGTATGTGCATGGC+TGG - Chr3:91890190-91890209 MsG0380017094.01.T01:intron 40.0%
TTCTTGCAAGATGTGTGTGA+AGG - Chr3:91892560-91892579 MsG0380017094.01.T01:intron 40.0%
TTCTTGCAAGATGTGTGTGA+GGG - Chr3:91892560-91892579 MsG0380017094.01.T01:intron 40.0%
TTGTGTCCCGGAAATTTAGT+TGG - Chr3:91891399-91891418 MsG0380017094.01.T01:intron 40.0%
TTTATCCAATCAAGTGGGGT+AGG + Chr3:91890734-91890753 None:intergenic 40.0%
! ATGTTGAGGGTATAAAGGAG+TGG - Chr3:91893819-91893838 MsG0380017094.01.T01:intron 40.0%
! ATGTTTCCCCGATATTGGTT+TGG - Chr3:91892466-91892485 MsG0380017094.01.T01:intron 40.0%
! CCAAGCTTTATCCAATCAAG+TGG + Chr3:91890740-91890759 None:intergenic 40.0%
! GTGTTTGTGTTTGTGTTGGT+GGG + Chr3:91889627-91889646 None:intergenic 40.0%
! GTTGTATGTGAAGGAAGTGT+TGG - Chr3:91890354-91890373 MsG0380017094.01.T01:intron 40.0%
! TTTAGGATACGGAGCGTAAT+CGG + Chr3:91889691-91889710 None:intergenic 40.0%
! TTTGGGTCGAGTTTAGGATA+CGG + Chr3:91889702-91889721 None:intergenic 40.0%
!! GACCCAGTTGATGATATTGT+TGG - Chr3:91892133-91892152 MsG0380017094.01.T01:intron 40.0%
!! GATTCGGTGAAAGATGTTCT+TGG - Chr3:91889946-91889965 MsG0380017094.01.T01:intron 40.0%
!! TCTTCATGGTGTTGTGAGAT+GGG - Chr3:91891991-91892010 MsG0380017094.01.T01:intron 40.0%
!! TTCTCTGAAACGTGAATACG+TGG + Chr3:91889478-91889497 None:intergenic 40.0%
!! TTCTTCATGGTGTTGTGAGA+TGG - Chr3:91891990-91892009 MsG0380017094.01.T01:intron 40.0%
!!! AACTTTTGAGACTGTACCAG+AGG - Chr3:91891016-91891035 MsG0380017094.01.T01:intron 40.0%
AACAAGTGCCCTAAGGGTTA+GGG + Chr3:91892354-91892373 None:intergenic 45.0%
AACCCACTTTCTTACCAGAC+TGG - Chr3:91891140-91891159 MsG0380017094.01.T01:intron 45.0%
AAGAAGGCTGAAGATCTTGC+TGG - Chr3:91890000-91890019 MsG0380017094.01.T01:intron 45.0%
AATTTCCGGGACACAAGTTG+GGG + Chr3:91891395-91891414 None:intergenic 45.0%
ACAGCAGCATCAGCAAAACT+AGG + Chr3:91890933-91890952 None:intergenic 45.0%
ACATAGGGATTAGATTCGGC+GGG + Chr3:91889792-91889811 None:intergenic 45.0%
ACATGAGGTTGAACTTGAGG+AGG + Chr3:91889600-91889619 None:intergenic 45.0%
ACCTGCGATGTTGTATGTGA+AGG - Chr3:91890345-91890364 MsG0380017094.01.T01:intron 45.0%
ACTTTGTATGTGCATGGCTG+GGG - Chr3:91890192-91890211 MsG0380017094.01.T01:intron 45.0%
AGAATCAGAGTCTTGGGGTT+TGG + Chr3:91889655-91889674 None:intergenic 45.0%
AGCAAGATCTTCAGCCTTCT+TGG + Chr3:91890001-91890020 None:intergenic 45.0%
ATGATGGTTGCCGCATGTTA+GGG - Chr3:91892108-91892127 MsG0380017094.01.T01:intron 45.0%
CACCAGTCTGGTAAGAAAGT+GGG + Chr3:91891145-91891164 None:intergenic 45.0%
CAGCTCCACAAACTAGACTA+AGG + Chr3:91894415-91894434 None:intergenic 45.0%
CATGCTAACAAGTGCCCTAA+GGG + Chr3:91892360-91892379 None:intergenic 45.0%
CTTGCAAGATGTGTGTGAAG+GGG - Chr3:91893151-91893170 MsG0380017094.01.T01:intron 45.0%
GAAACTAGGCTTAGGTGCTT+TGG - Chr3:91890509-91890528 MsG0380017094.01.T01:intron 45.0%
GAATCAGAGTCTTGGGGTTT+GGG + Chr3:91889654-91889673 None:intergenic 45.0%
GACATAGGGATTAGATTCGG+CGG + Chr3:91889793-91889812 None:intergenic 45.0%
GAGAGTGAGAATCAGAGTCT+TGG + Chr3:91889662-91889681 None:intergenic 45.0%
GAGTGAGAATCAGAGTCTTG+GGG + Chr3:91889660-91889679 None:intergenic 45.0%
GAGTGGAAGCTAACTAAGGT+GGG - Chr3:91893836-91893855 MsG0380017094.01.T01:intron 45.0%
GCAATCTCGCTGATACACTA+TGG - Chr3:91894290-91894309 MsG0380017094.01.T01:CDS 45.0%
GCGAGGGCAAGAATATGATA+GGG - Chr3:91892616-91892635 MsG0380017094.01.T01:intron 45.0%
GGTGTTTGTGTTTGTGTTGG+TGG + Chr3:91889628-91889647 None:intergenic 45.0%
TAACAAGTGCCCTAAGGGTT+AGG + Chr3:91892355-91892374 None:intergenic 45.0%
TAACAAGTGCCCTAAGGGTT+GGG + Chr3:91892355-91892374 None:intergenic 45.0%
TCACCAGTCTGGTAAGAAAG+TGG + Chr3:91891146-91891165 None:intergenic 45.0%
TCATGCTAACAAGTGCCCTA+AGG + Chr3:91892361-91892380 None:intergenic 45.0%
TCCTTCACATACAACATCGC+AGG + Chr3:91890349-91890368 None:intergenic 45.0%
TCTTGCAAGATGTGTGTGAG+GGG - Chr3:91892561-91892580 MsG0380017094.01.T01:intron 45.0%
TGCATGTTACCTATGAACCC+AGG - Chr3:91891686-91891705 MsG0380017094.01.T01:intron 45.0%
TGCGAGGGCAAGAATATGAT+AGG - Chr3:91892615-91892634 MsG0380017094.01.T01:intron 45.0%
TGCTCAGGGAACAAAAGTTC+TGG - Chr3:91890962-91890981 MsG0380017094.01.T01:intron 45.0%
TGGACATGAGGTTGAACTTG+AGG + Chr3:91889603-91889622 None:intergenic 45.0%
TTAGGATACGGAGCGTAATC+GGG + Chr3:91889690-91889709 None:intergenic 45.0%
TTGCAAGATGTGTGTGAAGG+GGG - Chr3:91893152-91893171 MsG0380017094.01.T01:intron 45.0%
! ACAAAAGTTCTGGCAGAAGG+TGG - Chr3:91890972-91890991 MsG0380017094.01.T01:intron 45.0%
! ACTCTTAGCAGAAGTGGGTT+CGG + Chr3:91889832-91889851 None:intergenic 45.0%
! AGCTCAAGCCCTGAGTTTTT+AGG - Chr3:91893670-91893689 MsG0380017094.01.T01:intron 45.0%
! AGTTTTGCTGATGCTGCTGT+GGG - Chr3:91890933-91890952 MsG0380017094.01.T01:intron 45.0%
! GGAACAAAAGTTCTGGCAGA+AGG - Chr3:91890969-91890988 MsG0380017094.01.T01:intron 45.0%
! TTGTGTTTGTGTTGGTGGGT+TGG + Chr3:91889623-91889642 None:intergenic 45.0%
! TTTGGAGTACCTGGGTTCAT+AGG + Chr3:91891698-91891717 None:intergenic 45.0%
!! AGACTGTACAAGGAGCACTA+AGG + Chr3:91891933-91891952 None:intergenic 45.0%
!! ATTGTTGACTTGGGGAGGAT+CGG + Chr3:91889556-91889575 None:intergenic 45.0%
!! CTCATATTGTTGACTTGGGG+AGG + Chr3:91889561-91889580 None:intergenic 45.0%
!! GAAGAGTGCTCTTAGAGCAT+TGG - Chr3:91893441-91893460 MsG0380017094.01.T01:intron 45.0%
!! TAGTTTTGCTGATGCTGCTG+TGG - Chr3:91890932-91890951 MsG0380017094.01.T01:intron 45.0%
!!! AATAATATATTAAATTTTAG+GGG - Chr3:91892826-91892845 MsG0380017094.01.T01:intron 5.0%
!!! ATATTTTTATAAATATTGAT+TGG - Chr3:91892682-91892701 MsG0380017094.01.T01:intron 5.0%
AACTGGTGCAGGAGAGACAT+AGG + Chr3:91889808-91889827 None:intergenic 50.0%
ACAAGTGCCCTAAGGGTTAG+GGG + Chr3:91892353-91892372 None:intergenic 50.0%
ACGTCGTTTGGGTCGAGTTT+AGG + Chr3:91889708-91889727 None:intergenic 50.0%
ACTAGGCTTAGGTGCTTTGG+AGG - Chr3:91890512-91890531 MsG0380017094.01.T01:intron 50.0%
ACTGGGTCAACCCTAACATG+CGG + Chr3:91892121-91892140 None:intergenic 50.0%
ACTGGTGCAGGAGAGACATA+GGG + Chr3:91889807-91889826 None:intergenic 50.0%
AGACTGGTGACCAGACTCAA+TGG - Chr3:91891156-91891175 MsG0380017094.01.T01:intron 50.0%
AGCTGCTGAAGCTACCAAGA+AGG - Chr3:91889984-91890003 MsG0380017094.01.T01:intron 50.0%
ATCAAGTGGGGTAGGCTACA+TGG + Chr3:91890726-91890745 None:intergenic 50.0%
ATTGAGTCTGGTCACCAGTC+TGG + Chr3:91891157-91891176 None:intergenic 50.0%
CGAGATTCAGTAGCAACAGG+TGG + Chr3:91889744-91889763 None:intergenic 50.0%
CTAACAAGTGCCCTAAGGGT+TGG + Chr3:91892356-91892375 None:intergenic 50.0%
CTTGCAAGATGTGTGTGAGG+GGG - Chr3:91892562-91892581 MsG0380017094.01.T01:intron 50.0%
GATTCAGTAGCAACAGGTGG+TGG + Chr3:91889741-91889760 None:intergenic 50.0%
GCTGTGGGAAGAATTGCTCA+GGG - Chr3:91890948-91890967 MsG0380017094.01.T01:intron 50.0%
GGAGTGGAAGCTAACTAAGG+TGG - Chr3:91893835-91893854 MsG0380017094.01.T01:intron 50.0%
TAAACCCCCAACTTGTGTCC+CGG - Chr3:91891387-91891406 MsG0380017094.01.T01:intron 50.0%
TAGGATACGGAGCGTAATCG+GGG + Chr3:91889689-91889708 None:intergenic 50.0%
TGCTGTGGGAAGAATTGCTC+AGG - Chr3:91890947-91890966 MsG0380017094.01.T01:intron 50.0%
TGTAGCCTACCCCACTTGAT+TGG - Chr3:91890726-91890745 MsG0380017094.01.T01:intron 50.0%
TTGCAAGATGTGTGTGAGGG+GGG - Chr3:91892563-91892582 MsG0380017094.01.T01:intron 50.0%
! AGAGTCTTGGGGTTTGGGAT+TGG + Chr3:91889649-91889668 None:intergenic 50.0%
! ATTTCCGGGACACAAGTTGG+GGG + Chr3:91891394-91891413 None:intergenic 50.0%
! CTCTTAGCAGAAGTGGGTTC+GGG + Chr3:91889831-91889850 None:intergenic 50.0%
! GATGATGGTTGCCGCATGTT+AGG - Chr3:91892107-91892126 MsG0380017094.01.T01:intron 50.0%
! TGGGCTTAGGGCACTTGTTA+AGG + Chr3:91893580-91893599 None:intergenic 50.0%
!! AGTAGGGTTGGCTTTGCTTG+TGG + Chr3:91894172-91894191 None:intergenic 50.0%
!! GGTTGGCTTTGCTTGTGGAT+GGG + Chr3:91894167-91894186 None:intergenic 50.0%
ACCTCTGCTGGACCTGTCAT+GGG - Chr3:91891074-91891093 MsG0380017094.01.T01:intron 55.0%
ACTGCTCGCAGCTGATGCAA+TGG + Chr3:91894141-91894160 None:intergenic 55.0%
AGGATACGGAGCGTAATCGG+GGG + Chr3:91889688-91889707 None:intergenic 55.0%
ATTAGATTCGGCGGGCATGG+TGG + Chr3:91889784-91889803 None:intergenic 55.0%
CCCTAAGCCCCTAACCCTTA+GGG - Chr3:91892343-91892362 MsG0380017094.01.T01:intron 55.0%
CCCTAAGGGTTAGGGGCTTA+GGG + Chr3:91892346-91892365 None:intergenic 55.0%
GCAAGATGTGTGCTGTGCGA+GGG - Chr3:91892600-91892619 MsG0380017094.01.T01:intron 55.0%
GCGCGAGATTCAGTAGCAAC+AGG + Chr3:91889747-91889766 None:intergenic 55.0%
TGCAAGATGTGTGCTGTGCG+AGG - Chr3:91892599-91892618 MsG0380017094.01.T01:intron 55.0%
TGCCCTAAGCCCAACCCTTA+GGG - Chr3:91893587-91893606 MsG0380017094.01.T01:intron 55.0%
TGCCCTAAGGGTTGGGCTTA+GGG + Chr3:91893592-91893611 None:intergenic 55.0%
! GGGGCTTAGGGCACTTGTTA+AGG + Chr3:91892923-91892942 None:intergenic 55.0%
! TCAGTAGCAACAGGTGGTGG+TGG + Chr3:91889738-91889757 None:intergenic 55.0%
!! GGCTTAGGTGCTTTGGAGGT+TGG - Chr3:91890516-91890535 MsG0380017094.01.T01:intron 55.0%
!! GGGTTGGCTTTGCTTGTGGA+TGG + Chr3:91894168-91894187 None:intergenic 55.0%
!! GTGTTGGTGGGTTGGACATG+AGG + Chr3:91889615-91889634 None:intergenic 55.0%
CACCTCTGCTGGACCTGTCA+TGG - Chr3:91891073-91891092 MsG0380017094.01.T01:intron 60.0%
CATGACAGGTCCAGCAGAGG+TGG + Chr3:91891075-91891094 None:intergenic 60.0%
GCCCTAAGCCCCTAACCCTT+AGG - Chr3:91892342-91892361 MsG0380017094.01.T01:intron 60.0%
GCCCTAAGGGTTAGGGGCTT+AGG + Chr3:91892347-91892366 None:intergenic 60.0%
GGGATTAGATTCGGCGGGCA+TGG + Chr3:91889787-91889806 None:intergenic 60.0%
GGGGCTTAGGGCACGTGTTA+AGG + Chr3:91892334-91892353 None:intergenic 60.0%
GTGCCCTAAGCCCAACCCTT+AGG - Chr3:91893586-91893605 MsG0380017094.01.T01:intron 60.0%
GTGCCCTAAGGGTTGGGCTT+AGG + Chr3:91893593-91893612 None:intergenic 60.0%
TCCCATGACAGGTCCAGCAG+AGG + Chr3:91891078-91891097 None:intergenic 60.0%
TGCTACCTCTCCACCTCTGC+TGG - Chr3:91891062-91891081 MsG0380017094.01.T01:intron 60.0%
! GCAGAAGTGGGTTCGGGAAC+TGG + Chr3:91889825-91889844 None:intergenic 60.0%
! GTGGTGGTGCGACGTCGTTT+GGG + Chr3:91889719-91889738 None:intergenic 60.0%
!! GTAGCAACAGGTGGTGGTGG+TGG + Chr3:91889735-91889754 None:intergenic 60.0%
AGATTCGGCGGGCATGGTGG+TGG + Chr3:91889781-91889800 None:intergenic 65.0%
CAGGTCCAGCAGAGGTGGAG+AGG + Chr3:91891070-91891089 None:intergenic 65.0%
GTGGGTTCGGGAACTGGTGC+AGG + Chr3:91889819-91889838 None:intergenic 65.0%
! GGTGGTGGTGCGACGTCGTT+TGG + Chr3:91889720-91889739 None:intergenic 65.0%
!! CATGGTGGTGGCAGCATCGG+TGG + Chr3:91889769-91889788 None:intergenic 65.0%
!! GGGCATGGTGGTGGCAGCAT+CGG + Chr3:91889772-91889791 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr3 gene 91889369 91894658 91889369 ID=MsG0380017094.01;Name=MsG0380017094.01
Chr3 mRNA 91889369 91894658 91889369 ID=MsG0380017094.01.T01;Parent=MsG0380017094.01;Name=MsG0380017094.01.T01;_AED=0.38;_eAED=0.38;_QI=207|1|1|1|1|1|4|356|273
Chr3 exon 91889369 91889898 91889369 ID=MsG0380017094.01.T01:exon:5225;Parent=MsG0380017094.01.T01
Chr3 exon 91892837 91893108 91892837 ID=MsG0380017094.01.T01:exon:5224;Parent=MsG0380017094.01.T01
Chr3 exon 91893988 91894089 91893988 ID=MsG0380017094.01.T01:exon:5223;Parent=MsG0380017094.01.T01
Chr3 exon 91894178 91894658 91894178 ID=MsG0380017094.01.T01:exon:5222;Parent=MsG0380017094.01.T01
Chr3 five_prime_UTR 91894452 91894658 91894452 ID=MsG0380017094.01.T01:five_prime_utr;Parent=MsG0380017094.01.T01
Chr3 CDS 91894178 91894451 91894178 ID=MsG0380017094.01.T01:cds;Parent=MsG0380017094.01.T01
Chr3 CDS 91893988 91894089 91893988 ID=MsG0380017094.01.T01:cds;Parent=MsG0380017094.01.T01
Chr3 CDS 91892837 91893108 91892837 ID=MsG0380017094.01.T01:cds;Parent=MsG0380017094.01.T01
Chr3 CDS 91889725 91889898 91889725 ID=MsG0380017094.01.T01:cds;Parent=MsG0380017094.01.T01
Chr3 three_prime_UTR 91889369 91889724 91889369 ID=MsG0380017094.01.T01:three_prime_utr;Parent=MsG0380017094.01.T01
Gene Sequence

>MsG0380017094.01.T01

ATGAGTAGTAGTGGTGATCAACCTCCTCAAGTTCAACCTCATGTCCAACCCACCAACACAAACACAAACACCAATCCCAAACCCCAAGACTCTGATTCTCACTCTCACACCCCCGATTACGCTCCGTATCCTAAACTCGACCCAAACGACGTCGCACCACCACCACCACCTGTTGCTACTGAATCTCGCGCCACCGATGCTGCCACCACCATGCCCGCCGAATCTAATCCCTATGTCTCTCCTGCACCAGTTCCCGAACCCACTTCTGCTAAGAATACTTTAGATTCGGTGAAAGATGTTCTTGGAAAATGGGGTAAGAAAGCTGCTGAAGCTACCAAGAAGGCTGAAGATCTTGCTGGAAACATGTGGCAACACTTGAAAACAGGTCCTAGTTTTGCTGATGCTGCTGTGGGAAGAATTGCTCAGGGAACAAAAGTTCTGGCAGAAGGTGGCTACGAGAAGATCTTTAGACAAACTTTTGAGACTGTACCAGAGGAACAACTTCTTAAAACATATGCATGCTACCTCTCCACCTCTGCTGGACCTGTCATGGGAGTCTTGTATTTGTCAACTGCTAAGCTCGCATTCTGTAGCGACAACCCACTTTCTTACCAGACTGGTGACCAGACTCAATGGAGCTATTATAAGGTGGTCATTCCATTGCATCAGCTGCGAGCAGTGAACCCATCCACAAGCAAAGCCAACCCTACTGAAAAATTTATACAGATTATCTCCGTTGACAATCATGAATTTTGGTTTATGGGCTTTGTGTACTACGACAGCGCTGTTAAACATATTCAAGAAGCATTGCAATCTCGCTGA

Protein sequence

>MsG0380017094.01.T01

MSSSGDQPPQVQPHVQPTNTNTNTNPKPQDSDSHSHTPDYAPYPKLDPNDVAPPPPPVATESRATDAATTMPAESNPYVSPAPVPEPTSAKNTLDSVKDVLGKWGKKAAEATKKAEDLAGNMWQHLKTGPSFADAAVGRIAQGTKVLAEGGYEKIFRQTFETVPEEQLLKTYACYLSTSAGPVMGVLYLSTAKLAFCSDNPLSYQTGDQTQWSYYKVVIPLHQLRAVNPSTSKANPTEKFIQIISVDNHEFWFMGFVYYDSAVKHIQEALQSR*