AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280009910.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280009910.01.T01 MTR_2g072850 93.062 418 18 4 88 495 1 417 0.0 804
MsG0280009910.01.T01 MTR_1g086170 56.965 481 188 6 18 489 15 485 0.0 571
MsG0280009910.01.T01 MTR_2g072880 100.000 70 0 0 11 80 12 81 4.87e-44 151
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280009910.01.T01 AT1G17030 64.882 467 150 6 32 490 38 498 0.0 632
MsG0280009910.01.T01 AT2G47010 58.776 490 178 8 20 489 7 492 0.0 574
MsG0280009910.01.T01 AT2G47010 58.776 490 178 8 20 489 7 492 0.0 574
MsG0280009910.01.T01 AT2G47010 60.455 440 155 7 20 444 7 442 0.0 531
MsG0280009910.01.T01 AT4G09965 50.000 70 29 3 428 491 148 217 1.71e-14 73.2

Find 133 sgRNAs with CRISPR-Local

Find 354 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCCAAGGCCATGGCAATTT+TGG 0.102411 2:-60627288 MsG0280009910.01.T01:CDS
ATATTAGCTGCTAATATATT+TGG 0.179427 2:-60626115 MsG0280009910.01.T01:intron
GCTACTAATGATGCAAATTT+AGG 0.188556 2:-60627055 MsG0280009910.01.T01:CDS
AAACCGGGTGCGGCAAAATT+TGG 0.201953 2:+60626378 None:intergenic
TTTCAATAAGCATAATCTTT+TGG 0.226646 2:+60625970 None:intergenic
GTCACTTACTTTGATGTTTA+CGG 0.251158 2:+60631816 None:intergenic
TCCAAGTACATTGCATTTCC+TGG 0.273511 2:+60626455 None:intergenic
TATGTCCATTTCACTGTATC+TGG 0.292490 2:+60626616 None:intergenic
TTGCACGACGGTTCAGCTTC+CGG 0.299722 2:+60626590 None:intergenic
TGCACGACGGTTCAGCTTCC+GGG 0.302729 2:+60626591 None:intergenic
ACATCAAGCTCCCAAGTTCT+TGG 0.314890 2:+60626305 None:intergenic
ATTCTTGGACTTCCCATGTT+TGG 0.320243 2:+60631863 None:intergenic
CAACCTTCACCTTTCTTTGT+TGG 0.329279 2:+60626338 None:intergenic
TCAAAGCAATCAGCCATTCT+TGG 0.331823 2:+60631848 None:intergenic
ATTATGAGAGGAAGTTTCTA+TGG 0.344727 2:-60627094 MsG0280009910.01.T01:CDS
TCAGTTCCCAAGTCAATTGA+TGG 0.350327 2:+60626054 None:intergenic
TGCATGTTTATTTCTATTGT+TGG 0.362091 2:-60632011 MsG0280009910.01.T01:CDS
TCATGCCTCTAGTTTCATAA+TGG 0.367780 2:+60626876 None:intergenic
CCATGTCCATGAGGTAGAAT+TGG 0.377010 2:+60626696 None:intergenic
TGAGGCTGCGGGTTGCTATA+CGG 0.379761 2:+60626410 None:intergenic
GGAAAATCATGTTGTGGAAA+TGG 0.382470 2:+60627193 None:intergenic
ATCCAAAATTGCCATGGCCT+TGG 0.390045 2:+60627286 None:intergenic
ACCTTAAAATGTGGTGACTT+TGG 0.390926 2:+60626761 None:intergenic
CACCCGGTTTGGGGTGAGTA+CGG 0.406860 2:-60626365 MsG0280009910.01.T01:CDS
AGGAAGTTGGTAATGGAAGT+TGG 0.407243 2:-60626991 MsG0280009910.01.T01:CDS
CTTCTTATTATTCAGTGACT+TGG 0.408994 2:-60627018 MsG0280009910.01.T01:CDS
TACCCGTACTCACCCCAAAC+CGG 0.415426 2:+60626362 None:intergenic
TGCAATGTACTTGGAGAAAC+CGG 0.418599 2:-60626447 MsG0280009910.01.T01:CDS
CTCTCCACAGGTTCAGTACC+TGG 0.420254 2:+60626084 None:intergenic
GGACATTGTTCAAGATGGTT+GGG 0.431398 2:+60626566 None:intergenic
ATGAGGTAGAATTGGCTCCT+TGG 0.441517 2:+60626704 None:intergenic
GTAGGCATCGTAGGGGAACT+TGG 0.445383 2:+60626493 None:intergenic
GAGGAAGTTTCTATGGTTCA+TGG 0.446828 2:-60627087 MsG0280009910.01.T01:CDS
TTTATGATCACTAGCAGAAA+AGG 0.452250 2:-60627455 MsG0280009910.01.T01:intron
AGACTTCTTCTAAATATCCT+TGG 0.453758 2:-60626949 MsG0280009910.01.T01:CDS
AGGACATTGTTCAAGATGGT+TGG 0.459205 2:+60626565 None:intergenic
TAGTTCACAAGGTGCAAGAA+TGG 0.460787 2:-60627426 MsG0280009910.01.T01:CDS
TAACTGTCCATTCTGCTAGT+TGG 0.463954 2:+60626013 None:intergenic
CACAATTATACACAAGTGTA+TGG 0.464120 2:-60627130 MsG0280009910.01.T01:CDS
ATATATTTGGTGCAGGATCC+AGG 0.465541 2:-60626102 MsG0280009910.01.T01:CDS
TGCACATAATTTCAAACAAA+GGG 0.466961 2:+60632036 None:intergenic
TACCTTCTCTATCGTGCTCC+AGG 0.468070 2:-60626473 MsG0280009910.01.T01:CDS
ATATCAGCCATTGGAGATCC+TGG 0.469372 2:-60631956 MsG0280009910.01.T01:CDS
GTATAATTGTGGTACATTGA+TGG 0.474403 2:+60627142 None:intergenic
GGATTGGTGATCCAAGAACT+TGG 0.474749 2:-60626316 MsG0280009910.01.T01:CDS
CAAGAATGGGAGAACAGATT+AGG 0.481198 2:-60627412 MsG0280009910.01.T01:CDS
GATGCTACTACAGGATTCTC+TGG 0.483171 2:-60626905 MsG0280009910.01.T01:CDS
CCTTATCATACCTTCTCAAA+TGG 0.484203 2:-60626542 MsG0280009910.01.T01:CDS
CCTTGGAAGGAGTTATACTT+AGG 0.487242 2:-60627334 MsG0280009910.01.T01:CDS
CTGTCTCTGTTCGATGAACT+CGG 0.488402 2:+60626516 None:intergenic
CTTAGATCAGATGCTACTAC+AGG 0.490538 2:-60626914 MsG0280009910.01.T01:CDS
TCCAGGAAATGCAATGTACT+TGG 0.491818 2:-60626456 MsG0280009910.01.T01:CDS
TGTAACCAGATACAGTGAAA+TGG 0.494064 2:-60626621 MsG0280009910.01.T01:CDS
TACTCACCCCAAACCGGGTG+CGG 0.494068 2:+60626368 None:intergenic
TGGGAGAAGGAAGTTGGTAA+TGG 0.497371 2:-60626998 MsG0280009910.01.T01:CDS
CACTTGATATCAAGAAAGGA+GGG 0.497483 2:-60626730 MsG0280009910.01.T01:CDS
TGGAATCAATGCAATGAGGT+TGG 0.500632 2:-60631896 MsG0280009910.01.T01:CDS
TTCTTATTATTCAGTGACTT+GGG 0.502015 2:-60627017 MsG0280009910.01.T01:CDS
TCATGGACATGGGAAGTTGT+TGG 0.502759 2:-60626685 MsG0280009910.01.T01:CDS
GGAGTATCTCTTGAGGCTGC+GGG 0.502864 2:+60626399 None:intergenic
TGGAGTATCTCTTGAGGCTG+CGG 0.503368 2:+60626398 None:intergenic
AGGAAGTTTCTATGGTTCAT+GGG 0.503598 2:-60627086 MsG0280009910.01.T01:CDS
ACCCGGTTTGGGGTGAGTAC+GGG 0.508557 2:-60626364 MsG0280009910.01.T01:CDS
GTGACTTGGGAGAAGGAAGT+TGG 0.509085 2:-60627004 MsG0280009910.01.T01:CDS
CCAATTCTACCTCATGGACA+TGG 0.511723 2:-60626696 MsG0280009910.01.T01:CDS
GCTGCTAATATATTTGGTGC+AGG 0.513109 2:-60626109 MsG0280009910.01.T01:CDS
GGAACTGAAATATACATTAG+TGG 0.514785 2:-60626039 MsG0280009910.01.T01:CDS
AGTTCACAAGGTGCAAGAAT+GGG 0.518410 2:-60627425 MsG0280009910.01.T01:CDS
TTACTCCAATAATGGAGCTA+TGG 0.519160 2:-60632066 None:intergenic
AACAATGGAAAGCCGTGCGA+TGG 0.523011 2:-60626659 MsG0280009910.01.T01:CDS
TAGAGAAGGTAGGCATCGTA+GGG 0.525454 2:+60626485 None:intergenic
CAACAAAGAAAGGTGAAGGT+TGG 0.528934 2:-60626337 MsG0280009910.01.T01:CDS
TTCACACTTGATATCAAGAA+AGG 0.531105 2:-60626734 MsG0280009910.01.T01:CDS
TGGAAAAGAAGCACCAAACA+TGG 0.533992 2:-60631876 MsG0280009910.01.T01:CDS
AAGGAGGACATTGTTCAAGA+TGG 0.534215 2:+60626561 None:intergenic
ACAATGGAAAGCCGTGCGAT+GGG 0.536384 2:-60626658 MsG0280009910.01.T01:CDS
CCATTTGAGAAGGTATGATA+AGG 0.536448 2:+60626542 None:intergenic
TACGGGTATCCAACAAAGAA+AGG 0.538937 2:-60626347 MsG0280009910.01.T01:CDS
CAAGATTATATATCAGCCAT+TGG 0.539164 2:-60631965 MsG0280009910.01.T01:CDS
ATAGAGAAGGTAGGCATCGT+AGG 0.539206 2:+60626484 None:intergenic
TTATTCAGTGACTTGGGAGA+AGG 0.541291 2:-60627011 MsG0280009910.01.T01:CDS
TGGATGATAATGCTCAAAAG+TGG 0.542138 2:-60627268 MsG0280009910.01.T01:CDS
ACACTGGCCATCAATTGACT+TGG 0.543082 2:-60626061 MsG0280009910.01.T01:CDS
AAGAAAGGTGAAGGTTGGAT+TGG 0.543649 2:-60626332 MsG0280009910.01.T01:CDS
AAGGAGCCAATTCTACCTCA+TGG 0.546884 2:-60626702 MsG0280009910.01.T01:CDS
CATACACTTGTGTATAATTG+TGG 0.547171 2:+60627131 None:intergenic
GATGGCCAGTGTCTCTCCAC+AGG 0.551826 2:+60626072 None:intergenic
ACCCGTACTCACCCCAAACC+GGG 0.554291 2:+60626363 None:intergenic
CTGAACCTGTGGAGAGACAC+TGG 0.557518 2:-60626077 MsG0280009910.01.T01:CDS
AAACATGGGAAGTCCAAGAA+TGG 0.564081 2:-60631861 MsG0280009910.01.T01:CDS
CCTAAGTATAACTCCTTCCA+AGG 0.572025 2:+60627334 None:intergenic
TGAGAGTTGCTATTGAGTCA+TGG 0.577116 2:-60631916 MsG0280009910.01.T01:CDS
AGACATGTATGCACCTTGGA+AGG 0.578390 2:-60627347 MsG0280009910.01.T01:CDS
TACGGATCAGATGGTATCAC+CGG 0.581588 2:+60626428 None:intergenic
AACTCGGCTGCCATTTGAGA+AGG 0.582427 2:+60626532 None:intergenic
GATTGGTGATCCAAGAACTT+GGG 0.585095 2:-60626315 MsG0280009910.01.T01:CDS
CACTGGCCATCAATTGACTT+GGG 0.586693 2:-60626060 MsG0280009910.01.T01:CDS
AATGCTCAAAAGTGGAAACA+TGG 0.590612 2:-60627260 MsG0280009910.01.T01:CDS
TTTCATACCAGGATCTCCAA+TGG 0.594452 2:+60631949 None:intergenic
ATGCACATAATTTCAAACAA+AGG 0.594624 2:+60632035 None:intergenic
GTGGTGGCCAACTAGCAGAA+TGG 0.594829 2:-60626020 MsG0280009910.01.T01:CDS
GGAAGTTGTTGGAAGAACAA+TGG 0.597086 2:-60626674 MsG0280009910.01.T01:CDS
GTTGAAAAGAAGATTATGAG+AGG 0.603083 2:-60627106 MsG0280009910.01.T01:CDS
AGATGGTTGGGTTTGCACGA+CGG 0.607042 2:+60626578 None:intergenic
AAGCAAGGAAAATCATGTTG+TGG 0.610626 2:+60627187 None:intergenic
TTTGAGAAGGTATGATAAGG+AGG 0.612656 2:+60626545 None:intergenic
GATCCTGGTATGAAAAGAGA+TGG 0.612704 2:-60631941 MsG0280009910.01.T01:CDS
ATGCAGACATGTATGCACCT+TGG 0.613410 2:-60627351 MsG0280009910.01.T01:CDS
CAGTGAAATGGACATAAACC+CGG 0.617735 2:-60626609 MsG0280009910.01.T01:CDS
TATCCAACAAAGAAAGGTGA+AGG 0.620362 2:-60626341 MsG0280009910.01.T01:CDS
ACACTTGATATCAAGAAAGG+AGG 0.620950 2:-60626731 MsG0280009910.01.T01:CDS
CTTGATATCAAGAAAGGAGG+GGG 0.623013 2:-60626728 MsG0280009910.01.T01:CDS
ATTATCATCCAAAATTGCCA+TGG 0.624144 2:+60627280 None:intergenic
CAATTCTACCTCATGGACAT+GGG 0.628930 2:-60626695 MsG0280009910.01.T01:CDS
AAAATTTGGAGTATCTCTTG+AGG 0.629876 2:+60626392 None:intergenic
GGATCCAGGTACTGAACCTG+TGG 0.632510 2:-60626088 MsG0280009910.01.T01:CDS
CAATGGAAAGCCGTGCGATG+GGG 0.636540 2:-60626657 MsG0280009910.01.T01:CDS
GGGTTGCTATACGGATCAGA+TGG 0.640280 2:+60626419 None:intergenic
GGAAAAGAAGCACCAAACAT+GGG 0.648825 2:-60631875 MsG0280009910.01.T01:CDS
ACTTGATATCAAGAAAGGAG+GGG 0.653164 2:-60626729 MsG0280009910.01.T01:CDS
TTCCTGGAGCACGATAGAGA+AGG 0.658420 2:+60626471 None:intergenic
AAAGGTGACATTAGTTCACA+AGG 0.660274 2:-60627437 MsG0280009910.01.T01:CDS
ACTGAAATATACATTAGTGG+TGG 0.661752 2:-60626036 MsG0280009910.01.T01:CDS
CTAAGATAAAGCATCAACCA+AGG 0.667233 2:+60626932 None:intergenic
TGGAGCACGATAGAGAAGGT+AGG 0.668058 2:+60626475 None:intergenic
GATGTGACATCCCCATCGCA+CGG 0.669860 2:+60626647 None:intergenic
ATACACCCTTCACCAAAGCA+AGG 0.670915 2:+60627172 None:intergenic
GGTTACCATTATGAAACTAG+AGG 0.672011 2:-60626881 MsG0280009910.01.T01:CDS
AACAACTTCCCATGTCCATG+AGG 0.684995 2:+60626687 None:intergenic
GTGAACCTTACCTTAAAATG+TGG 0.685307 2:+60626752 None:intergenic
GCTACTACAGGATTCTCTGG+TGG 0.687235 2:-60626902 MsG0280009910.01.T01:CDS
AGAGAAGGTAGGCATCGTAG+GGG 0.753192 2:+60626486 None:intergenic
GTCATGGAATCAATGCAATG+AGG 0.758170 2:-60631900 MsG0280009910.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACATATGAATTTAAAAATTA+GGG + Chr2:60629714-60629733 None:intergenic 10.0%
!! CAATTGATAAAAAAAAATAA+CGG - Chr2:60629894-60629913 MsG0280009910.01.T01:intron 10.0%
!! CTAATAAAAGAATATATTAA+CGG + Chr2:60630346-60630365 None:intergenic 10.0%
!! TACATATGAATTTAAAAATT+AGG + Chr2:60629715-60629734 None:intergenic 10.0%
!!! ATTTAATTTTAAGTATTGTT+CGG + Chr2:60627829-60627848 None:intergenic 10.0%
!!! ATTTTAATTTCTAAATTTGT+TGG - Chr2:60628873-60628892 MsG0280009910.01.T01:intron 10.0%
!! AACTAACTAACATTATAATA+TGG - Chr2:60628816-60628835 MsG0280009910.01.T01:intron 15.0%
!! TACAAAAACTAAGTATTTAT+AGG - Chr2:60628694-60628713 MsG0280009910.01.T01:intron 15.0%
!!! ATCTTTTTGTATTACTTTTA+AGG + Chr2:60630465-60630484 None:intergenic 15.0%
!!! ATTCTTTTATTAGATTTCAT+TGG - Chr2:60630353-60630372 MsG0280009910.01.T01:intron 15.0%
!!! TTGATTGAATATTGTAATTT+TGG - Chr2:60626278-60626297 MsG0280009910.01.T01:intron 15.0%
!! AAACAATTGTGATTTATTGA+CGG + Chr2:60630408-60630427 None:intergenic 20.0%
!! AAATTGAAAAAACTTAAAGG+TGG + Chr2:60629206-60629225 None:intergenic 20.0%
!! ATATTAGCTGCTAATATATT+TGG - Chr2:60631912-60631931 MsG0280009910.01.T01:CDS 20.0%
!! ATTATAATGTTAGTTAGTTG+TGG + Chr2:60628815-60628834 None:intergenic 20.0%
!! ATTCTACTAACATCTTAAAT+TGG - Chr2:60627112-60627131 MsG0280009910.01.T01:CDS 20.0%
!! CAATTGATACACTATAAAAA+TGG + Chr2:60629128-60629147 None:intergenic 20.0%
!! CCAAAATTGAAAAAACTTAA+AGG + Chr2:60629209-60629228 None:intergenic 20.0%
!! CTAATAAACTAAAAGTAGAA+AGG + Chr2:60631198-60631217 None:intergenic 20.0%
!! GATTCTAACATTAATTGTTA+TGG - Chr2:60629656-60629675 MsG0280009910.01.T01:intron 20.0%
!! GTTAGTAGAATTTGAATTAA+GGG + Chr2:60627103-60627122 None:intergenic 20.0%
!! TACAAAAACTAAGTACTTAT+AGG - Chr2:60626932-60626951 MsG0280009910.01.T01:CDS 20.0%
!! TGTAAAAATATTCACAATGT+CGG + Chr2:60630385-60630404 None:intergenic 20.0%
!! TGTTAGTAGAATTTGAATTA+AGG + Chr2:60627104-60627123 None:intergenic 20.0%
!! TTAGTAGAATTTGAATTAAG+GGG + Chr2:60627102-60627121 None:intergenic 20.0%
!!! ACTGATTTTGATTTTGTTTT+TGG - Chr2:60629384-60629403 MsG0280009910.01.T01:intron 20.0%
!!! CCTTTAAGTTTTTTCAATTT+TGG - Chr2:60629206-60629225 MsG0280009910.01.T01:intron 20.0%
!!! TTAATAAGTTGAATTGCAAT+TGG - Chr2:60629796-60629815 MsG0280009910.01.T01:intron 20.0%
! AAAAATCATGCTTACTACAT+TGG + Chr2:60626604-60626623 None:intergenic 25.0%
! AATCAATCTCTTTCTGAATT+TGG - Chr2:60630536-60630555 MsG0280009910.01.T01:intron 25.0%
! AATCACAAATGGAAAACATA+AGG + Chr2:60626333-60626352 None:intergenic 25.0%
! ATAAATCCAACTATGTTTGT+TGG + Chr2:60627039-60627058 None:intergenic 25.0%
! ATACTTAGGTAAAAAATGTG+AGG - Chr2:60630707-60630726 MsG0280009910.01.T01:intron 25.0%
! ATAGAAGGTTAATGAAATTC+AGG + Chr2:60627361-60627380 None:intergenic 25.0%
! ATCATTTCAAGAAAAAGTCA+AGG + Chr2:60631794-60631813 None:intergenic 25.0%
! ATGAAATTGAAGCAAAAGAA+AGG - Chr2:60629995-60630014 MsG0280009910.01.T01:intron 25.0%
! ATGCACATAATTTCAAACAA+AGG + Chr2:60625995-60626014 None:intergenic 25.0%
! ATTAGTCGTGAAAATTATGT+AGG - Chr2:60631241-60631260 MsG0280009910.01.T01:intron 25.0%
! CAACAATTAGGATTTCAAAA+AGG - Chr2:60630167-60630186 MsG0280009910.01.T01:intron 25.0%
! CATATTCTGTCTATTATAGA+AGG + Chr2:60627376-60627395 None:intergenic 25.0%
! CTTCAATGAAACAAGTAATT+TGG - Chr2:60627456-60627475 MsG0280009910.01.T01:intron 25.0%
! GAAGAAAATACATTCATACA+TGG + Chr2:60629519-60629538 None:intergenic 25.0%
! GAATACTTATGTGTTTAGAT+AGG + Chr2:60629094-60629113 None:intergenic 25.0%
! TAAACCAAAGTATATCAAGT+TGG + Chr2:60630229-60630248 None:intergenic 25.0%
! TAGAAGGTTAATGAAATTCA+GGG + Chr2:60627360-60627379 None:intergenic 25.0%
! TAGTAGAATTTGAATTAAGG+GGG + Chr2:60627101-60627120 None:intergenic 25.0%
! TGCACATAATTTCAAACAAA+GGG + Chr2:60625994-60626013 None:intergenic 25.0%
! TTCTACCTAAAGTGAAAATA+AGG + Chr2:60628023-60628042 None:intergenic 25.0%
! TTCTTATTATTCAGTGACTT+GGG - Chr2:60631010-60631029 MsG0280009910.01.T01:intron 25.0%
!! AATGTATTTTCTTCTCACTA+AGG - Chr2:60629525-60629544 MsG0280009910.01.T01:intron 25.0%
!! ACTTGAATTAGATGTTTTAC+CGG - Chr2:60629837-60629856 MsG0280009910.01.T01:intron 25.0%
!! AGAGAAAGATTAGAATGTTT+TGG - Chr2:60628524-60628543 MsG0280009910.01.T01:intron 25.0%
!! ATAAGATTGATGACATATTC+AGG + Chr2:60627496-60627515 None:intergenic 25.0%
!! ATTTTTGTCACATAATAACG+AGG - Chr2:60630025-60630044 MsG0280009910.01.T01:intron 25.0%
!! TCAATAAATGATGTCACTTA+TGG - Chr2:60626510-60626529 MsG0280009910.01.T01:CDS 25.0%
!! TTGATAACAGTTTACGAAAA+AGG - Chr2:60630090-60630109 MsG0280009910.01.T01:intron 25.0%
!! TTGTTGTTCACTTGAAAATT+CGG + Chr2:60627744-60627763 None:intergenic 25.0%
!!! AATTGTTTTAAAAGCTCAGT+TGG - Chr2:60629753-60629772 MsG0280009910.01.T01:intron 25.0%
!!! TGCATGTTTATTTCTATTGT+TGG - Chr2:60626016-60626035 MsG0280009910.01.T01:CDS 25.0%
AACTAACCAACAAACATAGT+TGG - Chr2:60627030-60627049 MsG0280009910.01.T01:CDS 30.0%
AATCAGATCAAAGAATGAAC+CGG + Chr2:60629859-60629878 None:intergenic 30.0%
ACGAATACTTAGACTCTATT+AGG - Chr2:60629423-60629442 MsG0280009910.01.T01:intron 30.0%
ACTGAAATATACATTAGTGG+TGG - Chr2:60631991-60632010 MsG0280009910.01.T01:CDS 30.0%
ACTTAAAGAGGAAACTACAA+AGG - Chr2:60626831-60626850 MsG0280009910.01.T01:intron 30.0%
AGACTTCTTCTAAATATCCT+TGG - Chr2:60631078-60631097 MsG0280009910.01.T01:intron 30.0%
AGAGAAAGATTAGAATGTTC+TGG - Chr2:60626758-60626777 MsG0280009910.01.T01:CDS 30.0%
AGAGCTATCAAAATCACAAA+TGG + Chr2:60626344-60626363 None:intergenic 30.0%
AGATAATAAGACTCTGTTCT+TGG + Chr2:60628107-60628126 None:intergenic 30.0%
ATAATTCGATCTAACTCTCT+TGG - Chr2:60627655-60627674 MsG0280009910.01.T01:intron 30.0%
ATCCATCAAAGGAGATAAAA+AGG + Chr2:60628179-60628198 None:intergenic 30.0%
ATTATCATCCAAAATTGCCA+TGG + Chr2:60630750-60630769 None:intergenic 30.0%
ATTATGAGAGGAAGTTTCTA+TGG - Chr2:60630933-60630952 MsG0280009910.01.T01:intron 30.0%
CAAGATTATATATCAGCCAT+TGG - Chr2:60626062-60626081 MsG0280009910.01.T01:CDS 30.0%
CACAATTATACACAAGTGTA+TGG - Chr2:60630897-60630916 MsG0280009910.01.T01:intron 30.0%
CATACACTTGTGTATAATTG+TGG + Chr2:60630899-60630918 None:intergenic 30.0%
CCACAAATACGATTCATAAA+TGG + Chr2:60629485-60629504 None:intergenic 30.0%
CCATTTATGAATCGTATTTG+TGG - Chr2:60629482-60629501 MsG0280009910.01.T01:intron 30.0%
CTTCTTATTATTCAGTGACT+TGG - Chr2:60631009-60631028 MsG0280009910.01.T01:intron 30.0%
GCTACTAATGATGCAAATTT+AGG - Chr2:60630972-60630991 MsG0280009910.01.T01:intron 30.0%
GGAACTGAAATATACATTAG+TGG - Chr2:60631988-60632007 MsG0280009910.01.T01:CDS 30.0%
GTATAATTGTGGTACATTGA+TGG + Chr2:60630888-60630907 None:intergenic 30.0%
GTCACTTACTTTGATGTTTA+CGG + Chr2:60626214-60626233 None:intergenic 30.0%
GTTCTTTACTGAGATTAGAA+TGG - Chr2:60628559-60628578 MsG0280009910.01.T01:intron 30.0%
GTTGAAAAGAAGATTATGAG+AGG - Chr2:60630921-60630940 MsG0280009910.01.T01:intron 30.0%
GTTGTTAGAAATGTTAATCC+AGG + Chr2:60629260-60629279 None:intergenic 30.0%
GTTTCAAACAAATCTCAACA+AGG + Chr2:60627977-60627996 None:intergenic 30.0%
TAATTCAAGTGCAGTTCAAT+TGG + Chr2:60629827-60629846 None:intergenic 30.0%
TATGTTTATGATCACTACCA+CGG - Chr2:60629152-60629171 MsG0280009910.01.T01:intron 30.0%
TCACCTTATCCATACATTTA+TGG - Chr2:60628080-60628099 MsG0280009910.01.T01:intron 30.0%
TCATTCTCCAAAATTGATAG+TGG + Chr2:60631843-60631862 None:intergenic 30.0%
TGAAGAAGAAAGAAGTGATT+AGG + Chr2:60627951-60627970 None:intergenic 30.0%
TGGATAAGGTGAATTCATAT+TGG + Chr2:60628072-60628091 None:intergenic 30.0%
TTCACACTTGATATCAAGAA+AGG - Chr2:60631293-60631312 MsG0280009910.01.T01:intron 30.0%
TTGAAAAAACTTAAAGGTGG+TGG + Chr2:60629203-60629222 None:intergenic 30.0%
TTGGTATAGACAATTTAGAC+AGG - Chr2:60629772-60629791 MsG0280009910.01.T01:intron 30.0%
TTTATGATCACTAGCAGAAA+AGG - Chr2:60630572-60630591 MsG0280009910.01.T01:intron 30.0%
! AAAAATCATGCTTGCTACAT+TGG + Chr2:60626400-60626419 None:intergenic 30.0%
! AAAATTTGGAGTATCTCTTG+AGG + Chr2:60631638-60631657 None:intergenic 30.0%
! AATACAAGATTTTCTATGCG+AGG + Chr2:60627424-60627443 None:intergenic 30.0%
! ACTATGTTTGTTGGTTAGTT+AGG + Chr2:60627030-60627049 None:intergenic 30.0%
! AGTTTTCTCAAGTCAAGAAA+TGG + Chr2:60628306-60628325 None:intergenic 30.0%
! ATAAATGATGTCACTTATGG+TGG - Chr2:60626715-60626734 MsG0280009910.01.T01:CDS 30.0%
! GCTGTGGATAATGATATTTT+GGG + Chr2:60629322-60629341 None:intergenic 30.0%
! GTTTTCTCAAGTCAAGAAAT+GGG + Chr2:60628305-60628324 None:intergenic 30.0%
! TTTTATGAAGATTTGCAAGG+AGG + Chr2:60627806-60627825 None:intergenic 30.0%
!! AATTAACGGTAGTTTTGCTT+TGG - Chr2:60629940-60629959 MsG0280009910.01.T01:intron 30.0%
!! CTAGTTAGTTAGTTTGTTAG+TGG + Chr2:60626984-60627003 None:intergenic 30.0%
!! GTAGTAAGTTTTTGTTTGAG+TGG - Chr2:60629590-60629609 MsG0280009910.01.T01:intron 30.0%
!! GTCAATAATGGCTTTTGAAA+AGG + Chr2:60628329-60628348 None:intergenic 30.0%
!! TCAATCTCTCTATTTCTATC+AGG - Chr2:60631757-60631776 MsG0280009910.01.T01:intron 30.0%
!! TGGATAATGATATTTTGGGT+AGG + Chr2:60629318-60629337 None:intergenic 30.0%
!! TTGTGATTTTGATAGCTCTT+AGG - Chr2:60626345-60626364 MsG0280009910.01.T01:CDS 30.0%
!!! CTGCATTTTTTGTCTTCAAA+AGG + Chr2:60630662-60630681 None:intergenic 30.0%
!!! GATTGATTTTGATTTCGTGT+TGG + Chr2:60630524-60630543 None:intergenic 30.0%
!!! TCAGCTTTGAAACCATTTTT+TGG + Chr2:60630813-60630832 None:intergenic 30.0%
AAAAGAGTAATGAACGTTGC+TGG + Chr2:60629461-60629480 None:intergenic 35.0%
AAAGGTGACATTAGTTCACA+AGG - Chr2:60630590-60630609 MsG0280009910.01.T01:intron 35.0%
AAGCAAGGAAAATCATGTTG+TGG + Chr2:60630843-60630862 None:intergenic 35.0%
AAGCGTTTGATGAGGAAATA+GGG + Chr2:60627553-60627572 None:intergenic 35.0%
AAGTGATTAGGAGAGAAACA+TGG + Chr2:60627939-60627958 None:intergenic 35.0%
AATGCTCAAAAGTGGAAACA+TGG - Chr2:60630767-60630786 MsG0280009910.01.T01:intron 35.0%
ACACTTGATATCAAGAAAGG+AGG - Chr2:60631296-60631315 MsG0280009910.01.T01:intron 35.0%
ACCTTAAAATGTGGTGACTT+TGG + Chr2:60631269-60631288 None:intergenic 35.0%
ACTTGATATCAAGAAAGGAG+GGG - Chr2:60631298-60631317 MsG0280009910.01.T01:intron 35.0%
AGGAAGTTTCTATGGTTCAT+GGG - Chr2:60630941-60630960 MsG0280009910.01.T01:intron 35.0%
AGGCTCAAATGTCAACAATT+AGG - Chr2:60630155-60630174 MsG0280009910.01.T01:intron 35.0%
AGGGTTAAAACCAGTTCAAT+TGG - Chr2:60628944-60628963 MsG0280009910.01.T01:intron 35.0%
AGTGGTCAATATAACTTGAG+AGG - Chr2:60630203-60630222 MsG0280009910.01.T01:intron 35.0%
ATGCAAAGGTTATTAGCACT+TGG + Chr2:60628369-60628388 None:intergenic 35.0%
CAAAGTAATTTCTGCACACA+TGG + Chr2:60630291-60630310 None:intergenic 35.0%
CACTTGATATCAAGAAAGGA+GGG - Chr2:60631297-60631316 MsG0280009910.01.T01:intron 35.0%
CACTTGGTTATTGATACATG+TGG + Chr2:60628353-60628372 None:intergenic 35.0%
CCTTATCATACCTTCTCAAA+TGG - Chr2:60631485-60631504 MsG0280009910.01.T01:intron 35.0%
CTTCAGTAAACCAATTGAAC+TGG + Chr2:60628957-60628976 None:intergenic 35.0%
GCTGCAATTTGTCCAAAAAA+TGG - Chr2:60630798-60630817 MsG0280009910.01.T01:intron 35.0%
GGAAAATCATGTTGTGGAAA+TGG + Chr2:60630837-60630856 None:intergenic 35.0%
GGTCCATAAATGTATGGATA+AGG + Chr2:60628086-60628105 None:intergenic 35.0%
GGTTACCATTATGAAACTAG+AGG - Chr2:60631146-60631165 MsG0280009910.01.T01:intron 35.0%
GTAACCTTGTTCTTCTTCTT+CGG - Chr2:60627868-60627887 MsG0280009910.01.T01:intron 35.0%
GTATATGCATGTTCTATCAG+TGG + Chr2:60628497-60628516 None:intergenic 35.0%
GTGAACCTTACCTTAAAATG+TGG + Chr2:60631278-60631297 None:intergenic 35.0%
GTTCAAGATTCCAAGAAAGA+GGG + Chr2:60627693-60627712 None:intergenic 35.0%
GTTCTTGGTCCATAAATGTA+TGG + Chr2:60628092-60628111 None:intergenic 35.0%
TATCCAAAAAGAGGAAGAGA+AGG + Chr2:60628215-60628234 None:intergenic 35.0%
TATCCAACAAAGAAAGGTGA+AGG - Chr2:60631686-60631705 MsG0280009910.01.T01:intron 35.0%
TATGTCCATTTCACTGTATC+TGG + Chr2:60631414-60631433 None:intergenic 35.0%
TATTCGTGCATCAAAATGCA+AGG + Chr2:60629410-60629429 None:intergenic 35.0%
TCTTCTCACTAAGGAACAAA+CGG - Chr2:60629534-60629553 MsG0280009910.01.T01:intron 35.0%
TGTAACCAGATACAGTGAAA+TGG - Chr2:60631406-60631425 MsG0280009910.01.T01:intron 35.0%
TTATGGATCCTCGTTATGAA+AGG - Chr2:60629673-60629692 MsG0280009910.01.T01:intron 35.0%
TTCAAGATTCCAAGAAAGAG+GGG + Chr2:60627692-60627711 None:intergenic 35.0%
TTGCTAGAAAAGATCCAAAG+TGG + Chr2:60628238-60628257 None:intergenic 35.0%
! AAAGCGTTTGATGAGGAAAT+AGG + Chr2:60627554-60627573 None:intergenic 35.0%
! AAAGGCGAACTTTATTTGAG+TGG - Chr2:60630185-60630204 MsG0280009910.01.T01:intron 35.0%
! ACCAAAGTCACCACATTTTA+AGG - Chr2:60631265-60631284 MsG0280009910.01.T01:intron 35.0%
! AGCCTTTTTATCTCCTTTGA+TGG - Chr2:60628174-60628193 MsG0280009910.01.T01:intron 35.0%
! ATGAGCTCCACTATCAATTT+TGG - Chr2:60631833-60631852 MsG0280009910.01.T01:CDS 35.0%
! ATTTTCCTTGCTTTGGTGAA+GGG - Chr2:60630850-60630869 MsG0280009910.01.T01:intron 35.0%
! ATTTTCTATGCGAGGAAACA+TGG + Chr2:60627416-60627435 None:intergenic 35.0%
! CAACATGATTTTCCTTGCTT+TGG - Chr2:60630843-60630862 MsG0280009910.01.T01:intron 35.0%
! CCATTTGAGAAGGTATGATA+AGG + Chr2:60631488-60631507 None:intergenic 35.0%
! CTAAGATAAAGCATCAACCA+AGG + Chr2:60631098-60631117 None:intergenic 35.0%
! GATACATGTGGTGTCAATAA+TGG + Chr2:60628341-60628360 None:intergenic 35.0%
! GCTCTCACACATTTTTAATC+GGG - Chr2:60626300-60626319 MsG0280009910.01.T01:intron 35.0%
! GGCTCTCACACATTTTTAAT+CGG - Chr2:60626299-60626318 MsG0280009910.01.T01:intron 35.0%
! GGCTGTGGATAATGATATTT+TGG + Chr2:60629323-60629342 None:intergenic 35.0%
! TCATGCCTCTAGTTTCATAA+TGG + Chr2:60631154-60631173 None:intergenic 35.0%
! TGGATGATAATGCTCAAAAG+TGG - Chr2:60630759-60630778 MsG0280009910.01.T01:intron 35.0%
! TTTGAGAAGGTATGATAAGG+AGG + Chr2:60631485-60631504 None:intergenic 35.0%
!! AACTATGAAAGCGTTTGATG+AGG + Chr2:60627561-60627580 None:intergenic 35.0%
!! CGGTTTTATGAAGATTTGCA+AGG + Chr2:60627809-60627828 None:intergenic 35.0%
!! GATGTTGTTTCAAGTGATGA+AGG + Chr2:60627623-60627642 None:intergenic 35.0%
!! TGTGGTAATGGTTTATGCAA+AGG + Chr2:60628383-60628402 None:intergenic 35.0%
!! TTTTGGGTAGGTCAGTTTTA+AGG + Chr2:60629306-60629325 None:intergenic 35.0%
!!! AGTCACCACATTTTAAGGTA+AGG - Chr2:60631270-60631289 MsG0280009910.01.T01:intron 35.0%
AAACATGGGAAGTCCAAGAA+TGG - Chr2:60626166-60626185 MsG0280009910.01.T01:intron 40.0%
AAGAAAGGTGAAGGTTGGAT+TGG - Chr2:60631695-60631714 MsG0280009910.01.T01:intron 40.0%
AAGGAGGACATTGTTCAAGA+TGG + Chr2:60631469-60631488 None:intergenic 40.0%
AAGTCAAGAAATGGGAGAAG+TGG + Chr2:60628297-60628316 None:intergenic 40.0%
ACAGATCTCACCTTACAAAC+CGG - Chr2:60630115-60630134 MsG0280009910.01.T01:intron 40.0%
AGGACAATGCACAAATGAGA+TGG + Chr2:60629344-60629363 None:intergenic 40.0%
AGGACATTGTTCAAGATGGT+TGG + Chr2:60631465-60631484 None:intergenic 40.0%
AGTCAAGAAATGGGAGAAGT+GGG + Chr2:60628296-60628315 None:intergenic 40.0%
AGTCTTCGTACATATGAGAG+CGG - Chr2:60626653-60626672 MsG0280009910.01.T01:CDS 40.0%
AGTTCACAAGGTGCAAGAAT+GGG - Chr2:60630602-60630621 MsG0280009910.01.T01:intron 40.0%
ATGAAGGTGATTGTGCGATT+AGG + Chr2:60627607-60627626 None:intergenic 40.0%
ATTCTTGGACTTCCCATGTT+TGG + Chr2:60626167-60626186 None:intergenic 40.0%
ATTGACGTCACAAGTATCTC+TGG + Chr2:60626697-60626716 None:intergenic 40.0%
CAACAAAGAAAGGTGAAGGT+TGG - Chr2:60631690-60631709 MsG0280009910.01.T01:intron 40.0%
CAACCTTCACCTTTCTTTGT+TGG + Chr2:60631692-60631711 None:intergenic 40.0%
CAAGAATGGGAGAACAGATT+AGG - Chr2:60630615-60630634 MsG0280009910.01.T01:intron 40.0%
CAATTCTACCTCATGGACAT+GGG - Chr2:60631332-60631351 MsG0280009910.01.T01:intron 40.0%
CAGTGAAATGGACATAAACC+CGG - Chr2:60631418-60631437 MsG0280009910.01.T01:intron 40.0%
CATTTGTGCATTGTCCTCTT+AGG - Chr2:60629347-60629366 MsG0280009910.01.T01:intron 40.0%
CCAAAGTGGTATCCAAAAAG+AGG + Chr2:60628224-60628243 None:intergenic 40.0%
CCTAAAGTGAAAATAAGGCG+TGG + Chr2:60628018-60628037 None:intergenic 40.0%
CCTAAGTATAACTCCTTCCA+AGG + Chr2:60630696-60630715 None:intergenic 40.0%
CCTTGGAAGGAGTTATACTT+AGG - Chr2:60630693-60630712 MsG0280009910.01.T01:intron 40.0%
CTACACACTCACACTTAAAG+AGG - Chr2:60628585-60628604 MsG0280009910.01.T01:intron 40.0%
CTTACTCGTGCTTACAAATC+CGG + Chr2:60630137-60630156 None:intergenic 40.0%
CTTAGATCAGATGCTACTAC+AGG - Chr2:60631113-60631132 MsG0280009910.01.T01:intron 40.0%
CTTCTCACTAAGGAACAAAC+GGG - Chr2:60629535-60629554 MsG0280009910.01.T01:intron 40.0%
CTTGATATCAAGAAAGGAGG+GGG - Chr2:60631299-60631318 MsG0280009910.01.T01:intron 40.0%
GAAACCGAAGAAGAAGAACA+AGG + Chr2:60627875-60627894 None:intergenic 40.0%
GAGGAAGTTTCTATGGTTCA+TGG - Chr2:60630940-60630959 MsG0280009910.01.T01:intron 40.0%
GAGGCCAACTTGATATACTT+TGG - Chr2:60630222-60630241 MsG0280009910.01.T01:intron 40.0%
GATCCTGGTATGAAAAGAGA+TGG - Chr2:60626086-60626105 MsG0280009910.01.T01:CDS 40.0%
GCAGTATGAATGATGCAACA+AGG + Chr2:60627174-60627193 None:intergenic 40.0%
GGAAGTTGTTGGAAGAACAA+TGG - Chr2:60631353-60631372 MsG0280009910.01.T01:intron 40.0%
GGACATTGTTCAAGATGGTT+GGG + Chr2:60631464-60631483 None:intergenic 40.0%
GGTTCAAGATTCCAAGAAAG+AGG + Chr2:60627694-60627713 None:intergenic 40.0%
GTCATGGAATCAATGCAATG+AGG - Chr2:60626127-60626146 MsG0280009910.01.T01:intron 40.0%
GTGAGGATACACGAAATCTT+TGG + Chr2:60628271-60628290 None:intergenic 40.0%
TAACTGTCCATTCTGCTAGT+TGG + Chr2:60632017-60632036 None:intergenic 40.0%
TACGGGTATCCAACAAAGAA+AGG - Chr2:60631680-60631699 MsG0280009910.01.T01:intron 40.0%
TAGTTCACAAGGTGCAAGAA+TGG - Chr2:60630601-60630620 MsG0280009910.01.T01:intron 40.0%
TCAAAGCAATCAGCCATTCT+TGG + Chr2:60626182-60626201 None:intergenic 40.0%
TCAGTATCAACCTAGCAACA+AGG + Chr2:60628410-60628429 None:intergenic 40.0%
TCAGTTCCCAAGTCAATTGA+TGG + Chr2:60631976-60631995 None:intergenic 40.0%
TCCAAGTACATTGCATTTCC+TGG + Chr2:60631575-60631594 None:intergenic 40.0%
TCCAGGAAATGCAATGTACT+TGG - Chr2:60631571-60631590 MsG0280009910.01.T01:intron 40.0%
TGATTGTGATGTGTATGCCA+TGG + Chr2:60627718-60627737 None:intergenic 40.0%
TGCAATGTACTTGGAGAAAC+CGG - Chr2:60631580-60631599 MsG0280009910.01.T01:intron 40.0%
TGGAATCAATGCAATGAGGT+TGG - Chr2:60626131-60626150 MsG0280009910.01.T01:intron 40.0%
TTAGGAGAGAAACATGGAGA+TGG + Chr2:60627933-60627952 None:intergenic 40.0%
TTTCAAGATCCATGAGAGTG+TGG + Chr2:60628152-60628171 None:intergenic 40.0%
TTTCATACCAGGATCTCCAA+TGG + Chr2:60626081-60626100 None:intergenic 40.0%
! AAGCCATCTCTTTTCATACC+AGG + Chr2:60626092-60626111 None:intergenic 40.0%
! AAGCCTTCTCTTCCTCTTTT+TGG - Chr2:60628209-60628228 MsG0280009910.01.T01:intron 40.0%
! CCTCTTTTTGGATACCACTT+TGG - Chr2:60628221-60628240 MsG0280009910.01.T01:intron 40.0%
! GATTGGTGATCCAAGAACTT+GGG - Chr2:60631712-60631731 MsG0280009910.01.T01:intron 40.0%
! GATTTTCCTTGCTTTGGTGA+AGG - Chr2:60630849-60630868 MsG0280009910.01.T01:intron 40.0%
! GCTTACAAATCCGGTTTGTA+AGG + Chr2:60630128-60630147 None:intergenic 40.0%
! GGTAGAAGAATCTACGCTTT+TGG - Chr2:60628036-60628055 MsG0280009910.01.T01:intron 40.0%
! TGAGAGTTGCTATTGAGTCA+TGG - Chr2:60626111-60626130 MsG0280009910.01.T01:CDS 40.0%
! TTATTCAGTGACTTGGGAGA+AGG - Chr2:60631016-60631035 MsG0280009910.01.T01:intron 40.0%
! TTTTAGATACTCCAAGGCCA+TGG - Chr2:60630730-60630749 MsG0280009910.01.T01:intron 40.0%
!! AACGGTAGTTTTGCTTTGGA+GGG - Chr2:60629944-60629963 MsG0280009910.01.T01:intron 40.0%
!! AGGAAGTTGGTAATGGAAGT+TGG - Chr2:60631036-60631055 MsG0280009910.01.T01:intron 40.0%
!! ATATATTTGGTGCAGGATCC+AGG - Chr2:60631925-60631944 MsG0280009910.01.T01:CDS 40.0%
!! GCTGCTAATATATTTGGTGC+AGG - Chr2:60631918-60631937 MsG0280009910.01.T01:CDS 40.0%
!! GGAAAAGAAGCACCAAACAT+GGG - Chr2:60626152-60626171 MsG0280009910.01.T01:intron 40.0%
!! TAACGGTAGTTTTGCTTTGG+AGG - Chr2:60629943-60629962 MsG0280009910.01.T01:intron 40.0%
!! TGGAAAAGAAGCACCAAACA+TGG - Chr2:60626151-60626170 MsG0280009910.01.T01:intron 40.0%
!!! CCACGCCTTATTTTCACTTT+AGG - Chr2:60628015-60628034 MsG0280009910.01.T01:intron 40.0%
!!! GTGAGGTTTTAGATACTCCA+AGG - Chr2:60630724-60630743 MsG0280009910.01.T01:intron 40.0%
AACAACTTCCCATGTCCATG+AGG + Chr2:60631343-60631362 None:intergenic 45.0%
AAGCTATGCTTGAAACCCCA+TGG - Chr2:60628448-60628467 MsG0280009910.01.T01:intron 45.0%
AAGGAGCCAATTCTACCTCA+TGG - Chr2:60631325-60631344 MsG0280009910.01.T01:intron 45.0%
ACACTGGCCATCAATTGACT+TGG - Chr2:60631966-60631985 MsG0280009910.01.T01:CDS 45.0%
ACATCAAGCTCCCAAGTTCT+TGG + Chr2:60631725-60631744 None:intergenic 45.0%
ACTGAACCGCAATCTCTTTG+CGG - Chr2:60628425-60628444 MsG0280009910.01.T01:intron 45.0%
AGAACTTGGGAGCTTGATGT+TGG - Chr2:60631725-60631744 MsG0280009910.01.T01:intron 45.0%
AGACATGTATGCACCTTGGA+AGG - Chr2:60630680-60630699 MsG0280009910.01.T01:intron 45.0%
AGAGAAACATGGAGATGGAG+GGG + Chr2:60627928-60627947 None:intergenic 45.0%
ATACACCCTTCACCAAAGCA+AGG + Chr2:60630858-60630877 None:intergenic 45.0%
ATATCAGCCATTGGAGATCC+TGG - Chr2:60626071-60626090 MsG0280009910.01.T01:CDS 45.0%
ATCCAAAATTGCCATGGCCT+TGG + Chr2:60630744-60630763 None:intergenic 45.0%
ATGCACAAATGAGATGGCTG+TGG + Chr2:60629338-60629357 None:intergenic 45.0%
ATGCAGACATGTATGCACCT+TGG - Chr2:60630676-60630695 MsG0280009910.01.T01:intron 45.0%
CAACAAGGCACATGTGGTAA+TGG + Chr2:60628395-60628414 None:intergenic 45.0%
CCAATTCTACCTCATGGACA+TGG - Chr2:60631331-60631350 MsG0280009910.01.T01:intron 45.0%
CCATGTCCATGAGGTAGAAT+TGG + Chr2:60631334-60631353 None:intergenic 45.0%
CGGATTTGTAAGCACGAGTA+AGG - Chr2:60630135-60630154 MsG0280009910.01.T01:intron 45.0%
CTACTCACTCGCACTTAAAG+AGG - Chr2:60626819-60626838 MsG0280009910.01.T01:intron 45.0%
CTGTCTCTGTTCGATGAACT+CGG + Chr2:60631514-60631533 None:intergenic 45.0%
CTTGGAATCTTGAACCTCCA+TGG - Chr2:60627698-60627717 MsG0280009910.01.T01:intron 45.0%
GAGAGAAACATGGAGATGGA+GGG + Chr2:60627929-60627948 None:intergenic 45.0%
GATGCTACTACAGGATTCTC+TGG - Chr2:60631122-60631141 MsG0280009910.01.T01:intron 45.0%
GTGATAGAACCCCTCTTTCT+TGG - Chr2:60627680-60627699 MsG0280009910.01.T01:intron 45.0%
TACGGATCAGATGGTATCAC+CGG + Chr2:60631602-60631621 None:intergenic 45.0%
TAGCTTCCGCAAAGAGATTG+CGG + Chr2:60628434-60628453 None:intergenic 45.0%
TCACTTCATCCACACTCTCA+TGG - Chr2:60628140-60628159 MsG0280009910.01.T01:intron 45.0%
TCATGGACATGGGAAGTTGT+TGG - Chr2:60631342-60631361 MsG0280009910.01.T01:intron 45.0%
TCCTGCGAGAAATCCATCAA+AGG + Chr2:60628190-60628209 None:intergenic 45.0%
TTGCGCAACCTTTCATAACG+AGG + Chr2:60629684-60629703 None:intergenic 45.0%
TTGTGATGTGTATGCCATGG+AGG + Chr2:60627715-60627734 None:intergenic 45.0%
! ATAGAGAAGGTAGGCATCGT+AGG + Chr2:60631546-60631565 None:intergenic 45.0%
! ATGAGGTAGAATTGGCTCCT+TGG + Chr2:60631326-60631345 None:intergenic 45.0%
! CACTGGCCATCAATTGACTT+GGG - Chr2:60631967-60631986 MsG0280009910.01.T01:CDS 45.0%
! GGATTGGTGATCCAAGAACT+TGG - Chr2:60631711-60631730 MsG0280009910.01.T01:intron 45.0%
! TAGAGAAGGTAGGCATCGTA+GGG + Chr2:60631545-60631564 None:intergenic 45.0%
!! GGACGTTCAAGTGGATTACA+CGG + Chr2:60627586-60627605 None:intergenic 45.0%
!! GGTTTTAACCCTGACGTCAT+TGG + Chr2:60628936-60628955 None:intergenic 45.0%
!! TCCTTTGATGGATTTCTCGC+AGG - Chr2:60628186-60628205 MsG0280009910.01.T01:intron 45.0%
!! TGGGAGAAGGAAGTTGGTAA+TGG - Chr2:60631029-60631048 MsG0280009910.01.T01:intron 45.0%
!! TTTTAAGGAGGCGGTTGTAG+TGG + Chr2:60629291-60629310 None:intergenic 45.0%
!!! GTAGGTCAGTTTTAAGGAGG+CGG + Chr2:60629300-60629319 None:intergenic 45.0%
!!! TGGGTAGGTCAGTTTTAAGG+AGG + Chr2:60629303-60629322 None:intergenic 45.0%
!! CTTAAAAAAAAAAAAATTAA+CGG - Chr2:60629926-60629945 MsG0280009910.01.T01:intron 5.0%
!!! TAAAAACTATATATTTTAAA+TGG + Chr2:60626236-60626255 None:intergenic 5.0%
AAACCGGGTGCGGCAAAATT+TGG + Chr2:60631652-60631671 None:intergenic 50.0%
AACAATGGAAAGCCGTGCGA+TGG - Chr2:60631368-60631387 MsG0280009910.01.T01:intron 50.0%
AAGGCGTGGAAAGCTCAAAG+AGG + Chr2:60628004-60628023 None:intergenic 50.0%
AATGGGAGAAGTGGGTAGTG+AGG + Chr2:60628288-60628307 None:intergenic 50.0%
ACAATGGAAAGCCGTGCGAT+GGG - Chr2:60631369-60631388 MsG0280009910.01.T01:intron 50.0%
ACCTAGCAACAAGGCACATG+TGG + Chr2:60628401-60628420 None:intergenic 50.0%
AGATGGTTGGGTTTGCACGA+CGG + Chr2:60631452-60631471 None:intergenic 50.0%
ATCAGTGGTATCAGAGCCTC+TGG + Chr2:60628482-60628501 None:intergenic 50.0%
CAGGAGTTGACAGCCACAAA+CGG + Chr2:60629241-60629260 None:intergenic 50.0%
CCTAGATGCCAATGACGTCA+GGG - Chr2:60628925-60628944 MsG0280009910.01.T01:intron 50.0%
GCTACTACAGGATTCTCTGG+TGG - Chr2:60631125-60631144 MsG0280009910.01.T01:intron 50.0%
GGAGAGAAACATGGAGATGG+AGG + Chr2:60627930-60627949 None:intergenic 50.0%
GGGACTGAGTTAGCACAAGA+AGG + Chr2:60627533-60627552 None:intergenic 50.0%
GGGTTGCTATACGGATCAGA+TGG + Chr2:60631611-60631630 None:intergenic 50.0%
GTGCGATTAGGACGTTCAAG+TGG + Chr2:60627595-60627614 None:intergenic 50.0%
TACCTTCTCTATCGTGCTCC+AGG - Chr2:60631554-60631573 MsG0280009910.01.T01:intron 50.0%
TCAGCTCGTACACATGAGAG+CGG - Chr2:60626451-60626470 MsG0280009910.01.T01:CDS 50.0%
TCCTAGATGCCAATGACGTC+AGG - Chr2:60628924-60628943 MsG0280009910.01.T01:intron 50.0%
TGGAGCACGATAGAGAAGGT+AGG + Chr2:60631555-60631574 None:intergenic 50.0%
TTCCTGGAGCACGATAGAGA+AGG + Chr2:60631559-60631578 None:intergenic 50.0%
TTGGCGCATACAACCGTTTG+TGG - Chr2:60629225-60629244 MsG0280009910.01.T01:intron 50.0%
! AAATTTTGCCGCACCCGGTT+TGG - Chr2:60631651-60631670 MsG0280009910.01.T01:intron 50.0%
! AACTCGGCTGCCATTTGAGA+AGG + Chr2:60631498-60631517 None:intergenic 50.0%
! AATTTTGCCGCACCCGGTTT+GGG - Chr2:60631652-60631671 MsG0280009910.01.T01:intron 50.0%
! ACCACATGTGCCTTGTTGCT+AGG - Chr2:60628397-60628416 MsG0280009910.01.T01:intron 50.0%
! ACTCCAAATTTTGCCGCACC+CGG - Chr2:60631646-60631665 MsG0280009910.01.T01:intron 50.0%
! AGAGAAGGTAGGCATCGTAG+GGG + Chr2:60631544-60631563 None:intergenic 50.0%
! AGCCTCTGGTTCATGATCCA+TGG + Chr2:60628468-60628487 None:intergenic 50.0%
! CCTCTGGTTCATGATCCATG+GGG + Chr2:60628466-60628485 None:intergenic 50.0%
! CTCCAAGGCCATGGCAATTT+TGG - Chr2:60630739-60630758 MsG0280009910.01.T01:intron 50.0%
! CTTAAAGGTGGTGGTACCAG+CGG + Chr2:60629194-60629213 None:intergenic 50.0%
! GCCTCTGGTTCATGATCCAT+GGG + Chr2:60628467-60628486 None:intergenic 50.0%
! GTGACTTGGGAGAAGGAAGT+TGG - Chr2:60631023-60631042 MsG0280009910.01.T01:intron 50.0%
! TGGAGTATCTCTTGAGGCTG+CGG + Chr2:60631632-60631651 None:intergenic 50.0%
ATGATCACTACCACGGCTGC+CGG - Chr2:60629159-60629178 MsG0280009910.01.T01:intron 55.0%
CAATGGAAAGCCGTGCGATG+GGG - Chr2:60631370-60631389 MsG0280009910.01.T01:intron 55.0%
CCCCATGGATCATGAACCAG+AGG - Chr2:60628463-60628482 MsG0280009910.01.T01:intron 55.0%
CCCTGACGTCATTGGCATCT+AGG + Chr2:60628928-60628947 None:intergenic 55.0%
CGTTTGTGGCTGTCAACTCC+TGG - Chr2:60629239-60629258 MsG0280009910.01.T01:intron 55.0%
CTCTCCACAGGTTCAGTACC+TGG + Chr2:60631946-60631965 None:intergenic 55.0%
CTGAACCTGTGGAGAGACAC+TGG - Chr2:60631950-60631969 MsG0280009910.01.T01:CDS 55.0%
GATGTGACATCCCCATCGCA+CGG + Chr2:60631383-60631402 None:intergenic 55.0%
GTGGTGGCCAACTAGCAGAA+TGG - Chr2:60632007-60632026 MsG0280009910.01.T01:CDS 55.0%
TACCCGTACTCACCCCAAAC+CGG + Chr2:60631668-60631687 None:intergenic 55.0%
TCAAGAAAGGAGGGGGTCCA+AGG - Chr2:60631306-60631325 MsG0280009910.01.T01:intron 55.0%
TTGCACGACGGTTCAGCTTC+CGG + Chr2:60631440-60631459 None:intergenic 55.0%
! GGAGTATCTCTTGAGGCTGC+GGG + Chr2:60631631-60631650 None:intergenic 55.0%
! GTAGGCATCGTAGGGGAACT+TGG + Chr2:60631537-60631556 None:intergenic 55.0%
! TGAGGCTGCGGGTTGCTATA+CGG + Chr2:60631620-60631639 None:intergenic 55.0%
!! ATTTTGCCGCACCCGGTTTG+GGG - Chr2:60631653-60631672 MsG0280009910.01.T01:intron 55.0%
!! GGATCCAGGTACTGAACCTG+TGG - Chr2:60631939-60631958 MsG0280009910.01.T01:CDS 55.0%
ACCCGTACTCACCCCAAACC+GGG + Chr2:60631667-60631686 None:intergenic 60.0%
GATGGCCAGTGTCTCTCCAC+AGG + Chr2:60631958-60631977 None:intergenic 60.0%
GTACCAGCGGCAAATGCTGC+CGG + Chr2:60629181-60629200 None:intergenic 60.0%
GTGTCGAGACGACGCCTAAG+AGG + Chr2:60629364-60629383 None:intergenic 60.0%
TACTCACCCCAAACCGGGTG+CGG + Chr2:60631662-60631681 None:intergenic 60.0%
TGCACGACGGTTCAGCTTCC+GGG + Chr2:60631439-60631458 None:intergenic 60.0%
!! ACCCGGTTTGGGGTGAGTAC+GGG - Chr2:60631663-60631682 MsG0280009910.01.T01:intron 60.0%
!! CACCCGGTTTGGGGTGAGTA+CGG - Chr2:60631662-60631681 MsG0280009910.01.T01:intron 60.0%
AGGAGGCGGTTGTAGTGGCG+AGG + Chr2:60629286-60629305 None:intergenic 65.0%
GGCGGTTGTAGTGGCGAGGT+TGG + Chr2:60629282-60629301 None:intergenic 65.0%
CTGCCGGCAGCATTTGCCGC+TGG - Chr2:60629175-60629194 MsG0280009910.01.T01:intron 70.0%
GCAAATGCTGCCGGCAGCCG+TGG + Chr2:60629172-60629191 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr2 gene 60625972 60632077 60625972 ID=MsG0280009910.01;Name=MsG0280009910.01
Chr2 mRNA 60625972 60632077 60625972 ID=MsG0280009910.01.T01;Parent=MsG0280009910.01;Name=MsG0280009910.01.T01;_AED=0.41;_eAED=0.42;_QI=0|0|0|1|0.33|0|4|0|495
Chr2 exon 60631825 60632077 60631825 ID=MsG0280009910.01.T01:exon:13437;Parent=MsG0280009910.01.T01
Chr2 exon 60626868 60627463 60626868 ID=MsG0280009910.01.T01:exon:13436;Parent=MsG0280009910.01.T01
Chr2 exon 60626307 60626786 60626307 ID=MsG0280009910.01.T01:exon:13435;Parent=MsG0280009910.01.T01
Chr2 exon 60625972 60626130 60625972 ID=MsG0280009910.01.T01:exon:13434;Parent=MsG0280009910.01.T01
Chr2 CDS 60631825 60632077 60631825 ID=MsG0280009910.01.T01:cds;Parent=MsG0280009910.01.T01
Chr2 CDS 60626868 60627463 60626868 ID=MsG0280009910.01.T01:cds;Parent=MsG0280009910.01.T01
Chr2 CDS 60626307 60626786 60626307 ID=MsG0280009910.01.T01:cds;Parent=MsG0280009910.01.T01
Chr2 CDS 60625972 60626130 60625972 ID=MsG0280009910.01.T01:cds;Parent=MsG0280009910.01.T01
Gene Sequence

>MsG0280009910.01.T01

ATGGAGCTATGGAAGCATACCCTTTGTTTGAAATTATGTGCATTTGCATGTTTATTTCTATTGTTGGAAGTGAATGCATTATTGAATGATCAAGATTATATATCAGCCATTGGAGATCCTGGTATGAAAAGAGATGGCTTGAGAGTTGCTATTGAGTCATGGAATCAATGCAATGAGGTTGGAAAAGAAGCACCAAACATGGGAAGTCCAAGAATGGCTGATTGCTTTGATGTCAAATACCGTAAACATCAAACAGAAAAGGTGACATTAGTTCACAAGGTGCAAGAATGGGAGAACAGATTAGGCATATCAAGCAATAATCAACTCCTTTTGAAGACAAAAAATGCAGACATGTATGCACCTTGGAAGGAGTTATACTTAGGTAAAAAATGTGAGGTTTTAGATACTCCAAGGCCATGGCAATTTTGGATGATAATGCTCAAAAGTGGAAACATGGATACTTTAGCTGCAATTTGTCCAAAAAATGGTTTCAAAGCTGAGCCATTTCCACAACATGATTTTCCTTGCTTTGGTGAAGGGTGTATGAATATGCCATCAATGTACCACAATTATACACAAGTGTATGGTGTTGAAAAGAAGATTATGAGAGGAAGTTTCTATGGTTCATGGGATTTGAATGCTACTAATGATGCAAATTTAGGTTATATGAATGATACTTCTTATTATTCAGTGACTTGGGAGAAGGAAGTTGGTAATGGAAGTTGGATTTTTCATCATGTGTTGAAGACTTCTTCTAAATATCCTTGGTTGATGCTTTATCTTAGATCAGATGCTACTACAGGATTCTCTGGTGGTTACCATTATGAAACTAGAGGCATGACAAAAATTGTACCAAAGTCACCACATTTTAAGGTAAGGTTCACACTTGATATCAAGAAAGGAGGGGGTCCAAGGAGCCAATTCTACCTCATGGACATGGGAAGTTGTTGGAAGAACAATGGAAAGCCGTGCGATGGGGATGTCACATCTGATGTAACCAGATACAGTGAAATGGACATAAACCCGGAAGCTGAACCGTCGTGCAAACCCAACCATCTTGAACAATGTCCTCCTTATCATACCTTCTCAAATGGCAGCCGAGTTCATCGAACAGAGACAGCCAAGTTCCCCTACGATGCCTACCTTCTCTATCGTGCTCCAGGAAATGCAATGTACTTGGAGAAACCGGTGATACCATCTGATCCGTATAGCAACCCGCAGCCTCAAGAGATACTCCAAATTTTGCCGCACCCGGTTTGGGGTGAGTACGGGTATCCAACAAAGAAAGGTGAAGGTTGGATTGGTGATCCAAGAACTTGGGAGCTTGATCTGCTAATATATTTGGTGCAGGATCCAGGTACTGAACCTGTGGAGAGACACTGGCCATCAATTGACTTGGGAACTGAAATATACATTAGTGGTGGCCAACTAGCAGAATGGACAGTTAGCAACTTTGATATTATCATCCCAAAAGATTATGCTTATTGA
Protein sequence

>MsG0280009910.01.T01

MELWKHTLCLKLCAFACLFLLLEVNALLNDQDYISAIGDPGMKRDGLRVAIESWNQCNEVGKEAPNMGSPRMADCFDVKYRKHQTEKVTLVHKVQEWENRLGISSNNQLLLKTKNADMYAPWKELYLGKKCEVLDTPRPWQFWMIMLKSGNMDTLAAICPKNGFKAEPFPQHDFPCFGEGCMNMPSMYHNYTQVYGVEKKIMRGSFYGSWDLNATNDANLGYMNDTSYYSVTWEKEVGNGSWIFHHVLKTSSKYPWLMLYLRSDATTGFSGGYHYETRGMTKIVPKSPHFKVRFTLDIKKGGGPRSQFYLMDMGSCWKNNGKPCDGDVTSDVTRYSEMDINPEAEPSCKPNHLEQCPPYHTFSNGSRVHRTETAKFPYDAYLLYRAPGNAMYLEKPVIPSDPYSNPQPQEILQILPHPVWGEYGYPTKKGEGWIGDPRTWELDLLIYLVQDPGTEPVERHWPSIDLGTEIYISGGQLAEWTVSNFDIIIPKDYAY*